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mlpack/fastlib/u/nvasil/kernel_pca/kernel_pca_impl.h
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2007-12-01 03:44:07 +00:00

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/*
* =====================================================================================
*
* Filename: kernel_pca_impl.h
*
* Description:
*
* Version: 1.0
* Created: 11/30/2007 09:03:12 PM EST
* Revision: none
* Compiler: gcc
*
* Author: Nikolaos Vasiloglou (NV), nvasil@ieee.org
* Company: Georgia Tech Fastlab-ESP Lab
*
* =====================================================================================
*/
#define TEMPLATE__ \
template<typename TREE, bool diagnostic>
#define KERNELPCA__ KernelPCA<TREE, diagnostic>
TEMPLATE__
void KERNELPCA::Init(std::string data_file,
std::string index_file) {
if (index_file.empty()) {
data_.Init(data_file);
} else {
data_.Init(data_file, index_file);
}
tree_.Init(&data_);
}
TEMPLATE__
void KERNELPCA::Destruct() {
tree_.Destruct();
data_.Destruct();
}
TEMPLATE__
void KERNELPCA::ComputeAffinity(index_t knns) {
fx_timer_start(fx_root, "build_tree")
test_tree.BuildDepthFirst();
fx_timer_start(fx_root, "duall_tree");
train_tree.AllNearestNeighbors(tree_.get_parent(), knns);
fx_timer_stop(fx_root, "duall_tree");
}
TEMPLATE__
template<typename DISTANCEKERNEL>
void KERNELPCA::ComputeGeneralKernelPCA(DISTANCEKERNEL kernel,
index_t num_of_eigenvalues){
}