phynexis-deps/armadillo-code
1
0
Fork 0
Code Issues Pull Requests Packages Projects Releases Wiki Activity

remove HDF5 wrapper functions

Browse Source
This commit is contained in:
conrad
2022-12-01 18:01:07 +10:00
parent ff77799e8d
commit 44ef7e7e3e
10 changed files with 171 additions and 596 deletions
Download Patch File Download Diff File Expand all files Collapse all files
src/wrapper1.cpp
-193
View File
@@ -39,20 +39,6 @@
}
#endif
#if defined(ARMA_USE_HDF5_CMAKE)
#undef H5_USE_110_API
#define H5_USE_110_API
#include <hdf5.h>
#if defined(H5_USE_16_API) || defined(H5_USE_16_API_DEFAULT)
#pragma message ("WARNING: use of HDF5 disabled; incompatible configuration: H5_USE_16_API or H5_USE_16_API_DEFAULT")
#undef ARMA_USE_HDF5_CMAKE
#endif
#endif
namespace arma
{
@@ -61,22 +47,6 @@ namespace arma
#include "armadillo_bits/def_lapack.hpp"
#include "armadillo_bits/def_arpack.hpp"
#include "armadillo_bits/def_superlu.hpp"
// no need to include def_hdf5.hpp -- it only contains #defines for when ARMA_USE_HDF5_CMAKE is not defined.
#if defined(ARMA_USE_HDF5_CMAKE)
// Wrapper functions: arma::H5open() and arma::H5check_version() to hijack calls to H5open() and H5check_version()
herr_t H5open()
{
return ::H5open();
}
herr_t H5check_version(unsigned majnum, unsigned minnum, unsigned relnum)
{
return ::H5check_version(majnum, minnum, relnum);
}
#endif
// at this stage we have prototypes for actual BLAS and LAPACK functions
@@ -1592,169 +1562,6 @@ extern "C"
}
#endif
#if defined(ARMA_USE_HDF5_CMAKE)
hid_t arma_H5Tcopy(hid_t dtype_id)
{
return H5Tcopy(dtype_id);
}
hid_t arma_H5Tcreate(H5T_class_t cl, size_t size)
{
return H5Tcreate(cl, size);
}
herr_t arma_H5Tinsert(hid_t dtype_id, const char* name, size_t offset, hid_t field_id)
{
return H5Tinsert(dtype_id, name, offset, field_id);
}
htri_t arma_H5Tequal(hid_t dtype_id1, hid_t dtype_id2)
{
return H5Tequal(dtype_id1, dtype_id2);
}
herr_t arma_H5Tclose(hid_t dtype_id)
{
return H5Tclose(dtype_id);
}
hid_t arma_H5Dopen(hid_t loc_id, const char* name, hid_t dapl_id)
{
return H5Dopen(loc_id, name, dapl_id);
}
hid_t arma_H5Dget_type(hid_t dataset_id)
{
return H5Dget_type(dataset_id);
}
hid_t arma_H5Dcreate(hid_t loc_id, const char* name, hid_t dtype_id, hid_t space_id, hid_t lcpl_id, hid_t dcpl_id, hid_t dapl_id)
{
return H5Dcreate(loc_id, name, dtype_id, space_id, lcpl_id, dcpl_id, dapl_id);
}
herr_t arma_H5Dwrite(hid_t dataset_id, hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t xfer_plist_id, const void* buf)
{
return H5Dwrite(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf);
}
herr_t arma_H5Dclose(hid_t dataset_id)
{
return H5Dclose(dataset_id);
}
hid_t arma_H5Dget_space(hid_t dataset_id)
{
return H5Dget_space(dataset_id);
}
herr_t arma_H5Dread(hid_t dataset_id, hid_t mem_type_id, hid_t mem_space_id, hid_t file_space_id, hid_t xfer_plist_id, void* buf)
{
return H5Dread(dataset_id, mem_type_id, mem_space_id, file_space_id, xfer_plist_id, buf);
}
int arma_H5Sget_simple_extent_ndims(hid_t space_id)
{
return H5Sget_simple_extent_ndims(space_id);
}
int arma_H5Sget_simple_extent_dims(hid_t space_id, hsize_t* dims, hsize_t* maxdims)
{
return H5Sget_simple_extent_dims(space_id, dims, maxdims);
}
herr_t arma_H5Sclose(hid_t space_id)
{
return H5Sclose(space_id);
}
hid_t arma_H5Screate_simple(int rank, const hsize_t* current_dims, const hsize_t* maximum_dims)
{
return H5Screate_simple(rank, current_dims, maximum_dims);
}
herr_t arma_H5Ovisit(hid_t object_id, H5_index_t index_type, H5_iter_order_t order, H5O_iterate_t op, void* op_data)
{
return H5Ovisit(object_id, index_type, order, op, op_data);
}
herr_t arma_H5Eset_auto(hid_t estack_id, H5E_auto_t func, void* client_data)
{
return H5Eset_auto(estack_id, func, client_data);
}
herr_t arma_H5Eget_auto(hid_t estack_id, H5E_auto_t* func, void** client_data)
{
return H5Eget_auto(estack_id, func, client_data);
}
hid_t arma_H5Fopen(const char* name, unsigned flags, hid_t fapl_id)
{
return H5Fopen(name, flags, fapl_id);
}
hid_t arma_H5Fcreate(const char* name, unsigned flags, hid_t fcpl_id, hid_t fapl_id)
{
return H5Fcreate(name, flags, fcpl_id, fapl_id);
}
herr_t arma_H5Fclose(hid_t file_id)
{
return H5Fclose(file_id);
}
htri_t arma_H5Fis_hdf5(const char* name)
{
return H5Fis_hdf5(name);
}
hid_t arma_H5Gcreate(hid_t loc_id, const char* name, hid_t lcpl_id, hid_t gcpl_id, hid_t gapl_id)
{
return H5Gcreate(loc_id, name, lcpl_id, gcpl_id, gapl_id);
}
hid_t arma_H5Gopen(hid_t loc_id, const char* name, hid_t gapl_id)
{
return H5Gopen(loc_id, name, gapl_id);
}
herr_t arma_H5Gclose(hid_t group_id)
{
return H5Gclose(group_id);
}
htri_t arma_H5Lexists(hid_t loc_id, const char* name, hid_t lapl_id)
{
return H5Lexists(loc_id, name, lapl_id);
}
herr_t arma_H5Ldelete(hid_t loc_id, const char* name, hid_t lapl_id)
{
return H5Ldelete(loc_id, name, lapl_id);
}
// H5T_NATIVE_* types. The rhs here expands to some macros.
hid_t arma_H5T_NATIVE_UCHAR = H5T_NATIVE_UCHAR;
hid_t arma_H5T_NATIVE_CHAR = H5T_NATIVE_CHAR;
hid_t arma_H5T_NATIVE_SHORT = H5T_NATIVE_SHORT;
hid_t arma_H5T_NATIVE_USHORT = H5T_NATIVE_USHORT;
hid_t arma_H5T_NATIVE_INT = H5T_NATIVE_INT;
hid_t arma_H5T_NATIVE_UINT = H5T_NATIVE_UINT;
hid_t arma_H5T_NATIVE_LONG = H5T_NATIVE_LONG;
hid_t arma_H5T_NATIVE_ULONG = H5T_NATIVE_ULONG;
hid_t arma_H5T_NATIVE_LLONG = H5T_NATIVE_LLONG;
hid_t arma_H5T_NATIVE_ULLONG = H5T_NATIVE_ULLONG;
hid_t arma_H5T_NATIVE_FLOAT = H5T_NATIVE_FLOAT;
hid_t arma_H5T_NATIVE_DOUBLE = H5T_NATIVE_DOUBLE;
#endif
} // end of extern "C"