Philipp Möller 35d2e7f1b6 Move the bib files and adjust paths

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BaseDoxyfile.in

Move the bib files and adjust paths

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deprecated.html

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DoxygenLayoutPackage.xml

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footer.html

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ftv2cl.png

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ftv2cpt.png

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ftv2ns.png

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header_package.html

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header.html

Move BaseDoxyfile and associated stuff to resources

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stylesheet.css

Move BaseDoxyfile and associated stuff to resources

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