Daniel Russel d20f58e635 moving out of the way for version 2

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..

internal

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align_generic.h

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align.h

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Atom.h

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basic.h

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cgal.h

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distance.h

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geometry_internal.h

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geometry.h

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iterator.h

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Matrix.h

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Model.h

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PDB.h

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Point.h

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Protein.h

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Quaternion.h

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Residue.h

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small_map.h

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Transform.h

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transforms.h

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