Files
mfem/fem/fmsdatacollection.cpp

168 lines
4.1 KiB
C++

// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
// LICENSE and NOTICE for details. LLNL-CODE-806117.
//
// This file is part of the MFEM library. For more information and source code
// availability visit https://mfem.org.
//
// MFEM is free software; you can redistribute it and/or modify it under the
// terms of the BSD-3 license. We welcome feedback and contributions, see file
// CONTRIBUTING.md for details.
#include "../config/config.hpp"
#ifdef MFEM_USE_FMS
#include "fem.hpp"
#include "../general/text.hpp"
#include <fmsio.h>
#include <string>
#include <sstream>
namespace mfem
{
// class FMSDataCollection implementation
FMSDataCollection::FMSDataCollection(const std::string& coll_name,
Mesh *mesh)
: DataCollection(coll_name, mesh),
fms_protocol("ascii")
{
appendRankToFileName = false; // always include rank in file names
cycle = 0; // always include cycle in directory names
}
#ifdef MFEM_USE_MPI
FMSDataCollection::FMSDataCollection(MPI_Comm comm,
const std::string& coll_name,
Mesh *mesh)
: DataCollection(coll_name, mesh),
fms_protocol("ascii")
{
m_comm = comm;
MPI_Comm_rank(comm, &myid);
MPI_Comm_size(comm, &num_procs);
appendRankToFileName = true; // always include rank in file names
cycle = 0; // always include cycle in directory names
}
#endif
FMSDataCollection::~FMSDataCollection()
{
// empty
}
void FMSDataCollection::Save()
{
// Convert this to FmsDataCollection.
FmsDataCollection dc;
if (DataCollectionToFmsDataCollection(this, &dc) == 0)
{
std::string root(RootFileName());
int err = FmsIOWrite(root.c_str(), fms_protocol.c_str(), dc);
FmsDataCollectionDestroy(&dc);
if (err)
{
MFEM_ABORT("Error creating FMS file: " << root);
}
}
else
{
MFEM_ABORT("Error converting data collection");
}
}
void FMSDataCollection::Load(int cycle)
{
DeleteAll();
this->cycle = cycle;
FmsDataCollection dc;
std::string root(RootFileName());
int err = FmsIORead(root.c_str(), fms_protocol.c_str(), &dc);
if (err == 0)
{
DataCollection *mdc = nullptr;
if (FmsDataCollectionToDataCollection(dc,&mdc) == 0)
{
// Tell the data collection we read that it does not own data.
// We will steal its data.
mdc->SetOwnData(false);
SetCycle(mdc->GetCycle());
SetTime(mdc->GetTime());
SetTimeStep(mdc->GetTimeStep());
name = mdc->GetCollectionName();
// Set mdc's mesh as our mesh.
SetMesh(mdc->GetMesh());
// Set mdc's fields/qfields as ours.
std::vector<std::string> names;
for (const auto &pair : mdc->GetFieldMap())
{
names.push_back(pair.first);
RegisterField(pair.first, pair.second);
}
for (const auto &name : names)
{
mdc->DeregisterField(name);
}
names.clear();
for (const auto &pair : mdc->GetQFieldMap())
{
names.push_back(pair.first);
RegisterQField(pair.first, pair.second);
}
for (const auto &name : names)
{
mdc->DeregisterField(name);
}
// Indicate that we own the data.
SetOwnData(true);
// Delete mdc. We stole its contents.
delete mdc;
}
FmsDataCollectionDestroy(&dc);
}
else
{
MFEM_ABORT("Error reading data collection: " << root);
}
}
void FMSDataCollection::SetProtocol(const std::string &protocol)
{
fms_protocol = protocol;
}
std::string FMSDataCollection::RootFileName()
{
std::string res;
if (pad_digits_cycle)
{
res = prefix_path + name + "_" +
to_padded_string(cycle, pad_digits_cycle) +
".fms";
}
else
{
res = prefix_path + name + ".fms";
}
return res;
}
} // namespace mfem
#endif