427 lines
10 KiB
C++
427 lines
10 KiB
C++
// Copyright (c) 2010-2022, Lawrence Livermore National Security, LLC. Produced
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// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
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// LICENSE and NOTICE for details. LLNL-CODE-806117.
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//
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// This file is part of the MFEM library. For more information and source code
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// availability visit https://mfem.org.
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//
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// MFEM is free software; you can redistribute it and/or modify it under the
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// terms of the BSD-3 license. We welcome feedback and contributions, see file
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// CONTRIBUTING.md for details.
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#include "../config/config.hpp"
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#ifdef MFEM_USE_MUMPS
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#ifdef MFEM_USE_MPI
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#include "mumps.hpp"
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#ifdef HYPRE_BIGINT
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#error "MUMPSSolver requires HYPRE_Int == int, for now."
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#endif
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// macro s.t. indices match MUMPS documentation
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#define MUMPS_ICNTL(I) icntl[(I) -1]
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#define MUMPS_INFO(I) info[(I) -1]
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namespace mfem
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{
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void MUMPSSolver::SetOperator(const Operator &op)
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{
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auto APtr = dynamic_cast<const HypreParMatrix *>(&op);
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MFEM_VERIFY(APtr, "Not compatible matrix type");
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height = op.Height();
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width = op.Width();
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comm = APtr->GetComm();
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MPI_Comm_size(comm, &numProcs);
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MPI_Comm_rank(comm, &myid);
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auto parcsr_op = (hypre_ParCSRMatrix *) const_cast<HypreParMatrix &>(*APtr);
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APtr->HostRead();
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hypre_CSRMatrix *csr_op = hypre_MergeDiagAndOffd(parcsr_op);
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APtr->HypreRead();
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#if MFEM_HYPRE_VERSION >= 21600
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hypre_CSRMatrixBigJtoJ(csr_op);
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#endif
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int *Iptr = csr_op->i;
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int *Jptr = csr_op->j;
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int n_loc = csr_op->num_rows;
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row_start = parcsr_op->first_row_index;
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MUMPS_INT8 nnz = 0;
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if (mat_type)
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{
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// count nnz in case of symmetric mode
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int k = 0;
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for (int i = 0; i < n_loc; i++)
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{
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for (int j = Iptr[i]; j < Iptr[i + 1]; j++)
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{
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int ii = row_start + i + 1;
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int jj = Jptr[k] + 1;
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k++;
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if (ii>=jj) { nnz++; }
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}
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}
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}
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else
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{
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nnz = csr_op->num_nonzeros;
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}
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int * I = new int[nnz];
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int * J = new int[nnz];
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// Fill in I and J arrays for
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// COO format in 1-based indexing
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int k = 0;
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double * data;
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if (mat_type)
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{
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int l = 0;
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data = new double[nnz];
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for (int i = 0; i < n_loc; i++)
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{
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for (int j = Iptr[i]; j < Iptr[i + 1]; j++)
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{
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int ii = row_start + i + 1;
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int jj = Jptr[k] + 1;
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if (ii >= jj)
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{
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I[l] = ii;
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J[l] = jj;
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data[l++] = csr_op->data[k];
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}
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k++;
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}
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}
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}
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else
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{
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for (int i = 0; i < n_loc; i++)
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{
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for (int j = Iptr[i]; j < Iptr[i + 1]; j++)
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{
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I[k] = row_start + i + 1;
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J[k] = Jptr[k] + 1;
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k++;
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}
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}
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data = csr_op->data;
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}
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// new MUMPS object
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if (id)
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{
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id->job = -2;
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dmumps_c(id);
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delete id;
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}
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id = new DMUMPS_STRUC_C;
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// C to Fortran communicator
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id->comm_fortran = (MUMPS_INT) MPI_Comm_c2f(comm);
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// Host is involved in computation
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id->par = 1;
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id->sym = mat_type;
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// MUMPS init
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id->job = -1;
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dmumps_c(id);
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// Set MUMPS default parameters
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SetParameters();
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id->n = parcsr_op->global_num_rows;
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id->nnz_loc = nnz;
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id->irn_loc = I;
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id->jcn_loc = J;
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id->a_loc = data;
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// MUMPS Analysis
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id->job = 1;
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dmumps_c(id);
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// MUMPS Factorization
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id->job = 2;
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dmumps_c(id);
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hypre_CSRMatrixDestroy(csr_op);
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delete [] I;
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delete [] J;
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if (mat_type) { delete [] data; }
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#if MFEM_MUMPS_VERSION >= 530
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delete [] irhs_loc;
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irhs_loc = new int[n_loc];
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for (int i = 0; i < n_loc; i++)
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{
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irhs_loc[i] = row_start + i + 1;
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}
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row_starts.SetSize(numProcs);
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MPI_Allgather(&row_start, 1, MPI_INT, row_starts, 1, MPI_INT, comm);
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#else
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if (myid == 0)
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{
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delete [] rhs_glob;
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delete [] recv_counts;
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rhs_glob = new double[parcsr_op->global_num_rows];
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recv_counts = new int[numProcs];
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}
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MPI_Gather(&n_loc, 1, MPI_INT, recv_counts, 1, MPI_INT, 0, comm);
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if (myid == 0)
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{
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delete [] displs;
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displs = new int[numProcs];
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displs[0] = 0;
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int s = 0;
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for (int k = 0; k < numProcs-1; k++)
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{
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s += recv_counts[k];
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displs[k+1] = s;
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}
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}
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#endif
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}
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void MUMPSSolver::Mult(const Vector &x, Vector &y) const
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{
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x.HostRead();
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y.HostReadWrite();
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#if MFEM_MUMPS_VERSION >= 530
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id->nloc_rhs = x.Size();
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id->lrhs_loc = x.Size();
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id->rhs_loc = x.GetData();
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id->irhs_loc = irhs_loc;
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id->lsol_loc = id->MUMPS_INFO(23);
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id->isol_loc = new int[id->MUMPS_INFO(23)];
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id->sol_loc = new double[id->MUMPS_INFO(23)];
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// MUMPS solve
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id->job = 3;
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dmumps_c(id);
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RedistributeSol(id->isol_loc, id->sol_loc, y.GetData());
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delete [] id->sol_loc;
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delete [] id->isol_loc;
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#else
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MPI_Gatherv(x.GetData(), x.Size(), MPI_DOUBLE,
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rhs_glob, recv_counts,
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displs, MPI_DOUBLE, 0, comm);
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if (myid == 0) { id->rhs = rhs_glob; }
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// MUMPS solve
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id->job = 3;
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dmumps_c(id);
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MPI_Scatterv(rhs_glob, recv_counts, displs,
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MPI_DOUBLE, y.GetData(), y.Size(),
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MPI_DOUBLE, 0, comm);
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#endif
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}
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void MUMPSSolver::MultTranspose(const Vector &x, Vector &y) const
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{
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// Set flag for Transpose Solve
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id->MUMPS_ICNTL(9) = 0;
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Mult(x,y);
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// Reset the flag
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id->MUMPS_ICNTL(9) = 1;
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}
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void MUMPSSolver::SetPrintLevel(int print_lvl)
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{
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print_level = print_lvl;
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}
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void MUMPSSolver::SetMatrixSymType(MatType mtype)
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{
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mat_type = mtype;
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}
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MUMPSSolver::~MUMPSSolver()
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{
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if (id)
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{
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#if MFEM_MUMPS_VERSION >= 530
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delete [] irhs_loc;
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#else
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delete [] recv_counts;
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delete [] displs;
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delete [] rhs_glob;
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#endif
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id->job = -2;
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dmumps_c(id);
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delete id;
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}
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}
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void MUMPSSolver::SetParameters()
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{
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// output stream for error messages
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id->MUMPS_ICNTL(1) = 6;
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// output stream for diagnosting printing local to each proc
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id->MUMPS_ICNTL(2) = 6;
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// output stream for global info
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id->MUMPS_ICNTL(3) = 6;
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// Level of error printing
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id->MUMPS_ICNTL(4) = print_level;
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//input matrix format (assembled)
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id->MUMPS_ICNTL(5) = 0;
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// Use A or A^T
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id->MUMPS_ICNTL(9) = 1;
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// Iterative refinement (disabled)
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id->MUMPS_ICNTL(10) = 0;
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// Error analysis-statistics (disabled)
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id->MUMPS_ICNTL(11) = 0;
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// Use of ScaLAPACK (Parallel factorization on root)
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id->MUMPS_ICNTL(13) = 0;
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// Percentage increase of estimated workspace (default = 20%)
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id->MUMPS_ICNTL(14) = 20;
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// Number of OpenMP threads (default)
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id->MUMPS_ICNTL(16) = 0;
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// Matrix input format (distributed)
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id->MUMPS_ICNTL(18) = 3;
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// Schur complement (no Schur complement matrix returned)
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id->MUMPS_ICNTL(19) = 0;
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#if MFEM_MUMPS_VERSION >= 530
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// Distributed RHS
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id->MUMPS_ICNTL(20) = 10;
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// Distributed Sol
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id->MUMPS_ICNTL(21) = 1;
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#else
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// Centralized RHS
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id->MUMPS_ICNTL(20) = 0;
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// Centralized Sol
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id->MUMPS_ICNTL(21) = 0;
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#endif
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// Out of core factorization and solve (disabled)
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id->MUMPS_ICNTL(22) = 0;
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// Max size of working memory (default = based on estimates)
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id->MUMPS_ICNTL(23) = 0;
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}
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#if MFEM_MUMPS_VERSION >= 530
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int MUMPSSolver::GetRowRank(int i, const Array<int> &row_starts_) const
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{
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if (row_starts_.Size() == 1)
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{
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return 0;
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}
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auto up = std::upper_bound(row_starts_.begin(), row_starts_.end(), i);
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return std::distance(row_starts_.begin(), up) - 1;
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}
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void MUMPSSolver::RedistributeSol(const int * row_map,
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const double * x, double * y) const
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{
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int size = id->MUMPS_INFO(23);
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int * send_count = new int[numProcs]();
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for (int i = 0; i < size; i++)
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{
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int j = row_map[i] - 1;
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int row_rank = GetRowRank(j, row_starts);
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if (myid == row_rank) { continue; }
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send_count[row_rank]++;
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}
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int * recv_count = new int[numProcs];
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MPI_Alltoall(send_count, 1, MPI_INT, recv_count, 1, MPI_INT, comm);
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int * send_displ = new int [numProcs]; send_displ[0] = 0;
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int * recv_displ = new int [numProcs]; recv_displ[0] = 0;
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int sbuff_size = send_count[numProcs-1];
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int rbuff_size = recv_count[numProcs-1];
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for (int k = 0; k < numProcs - 1; k++)
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{
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send_displ[k + 1] = send_displ[k] + send_count[k];
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recv_displ[k + 1] = recv_displ[k] + recv_count[k];
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sbuff_size += send_count[k];
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rbuff_size += recv_count[k];
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}
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int * sendbuf_index = new int[sbuff_size];
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double * sendbuf_values = new double[sbuff_size];
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int * soffs = new int[numProcs]();
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for (int i = 0; i < size; i++)
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{
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int j = row_map[i] - 1;
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int row_rank = GetRowRank(j, row_starts);
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if (myid == row_rank)
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{
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int local_index = j - row_start;
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y[local_index] = x[i];
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}
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else
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{
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int k = send_displ[row_rank] + soffs[row_rank];
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sendbuf_index[k] = j;
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sendbuf_values[k] = x[i];
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soffs[row_rank]++;
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}
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}
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int * recvbuf_index = new int[rbuff_size];
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double * recvbuf_values = new double[rbuff_size];
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MPI_Alltoallv(sendbuf_index,
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send_count,
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send_displ,
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MPI_INT,
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recvbuf_index,
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recv_count,
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recv_displ,
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MPI_INT,
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comm);
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MPI_Alltoallv(sendbuf_values,
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send_count,
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send_displ,
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MPI_DOUBLE,
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recvbuf_values,
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recv_count,
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recv_displ,
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MPI_DOUBLE,
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comm);
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// Unpack recv buffer
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for (int i = 0; i < rbuff_size; i++)
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{
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int local_index = recvbuf_index[i] - row_start;
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y[local_index] = recvbuf_values[i];
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}
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delete [] recvbuf_values;
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delete [] recvbuf_index;
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delete [] soffs;
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delete [] sendbuf_values;
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delete [] sendbuf_index;
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delete [] recv_displ;
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delete [] send_displ;
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delete [] recv_count;
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delete [] send_count;
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}
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#endif
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} // namespace mfem
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#endif // MFEM_USE_MPI
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#endif // MFEM_USE_MUMPS
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