Some more changes, now onto new parallel tree building.

fastlib/trunk/contrib/dongryel/thesis_research/core/table/global.cc

@@ -1,12 +1,17 @@
 /** @file global.cc
+ *
+ *  An instantiation of global memory mapped file object.
  *
  *  @author Dongryeol Lee (dongryel@cc.gatech.edu)
  */
 
-#include "memory_mapped_file.h"
+#include "core/table/memory_mapped_file.h"
 
 namespace core {
 namespace table {
+
+/** @brief A global memory mapped file object.
+ */
 core::table::MemoryMappedFile *global_m_file_ = NULL;
-};
-};
+}
+}

fastlib/trunk/contrib/dongryel/thesis_research/core/table/index_util.h

@@ -1,4 +1,7 @@
 /** @file index_util.h
+ *
+ *  A set of utilities for serializing/unserializing indices for
+ *  maintaining the mapping order in shuffled points in a table.
  *
  *  @author Dongryeol Lee (dongryel@cc.gatech.edu)
  */
@@ -97,7 +100,7 @@ class IndexUtil< std::pair<int, std::pair<int, int> > > {
       }
     }
 };
-};
-};
+}
+}
 
 #endif

fastlib/trunk/contrib/dongryel/thesis_research/core/table/memory_mapped_file.h

@@ -1,4 +1,6 @@
 /** @file memory_mapped_file.h
+ *
+ *  A declaration of memory mapped file object class.
  *
  *  @author Dongryeol Lee (dongryel@cc.gatech.edu)
  */
@@ -84,7 +86,7 @@ class MemoryMappedFile {
                boost::interprocess::anonymous_instance)[num_elements_in]();
     }
 };
-};
-};
+}
+}
 
 #endif

fastlib/trunk/contrib/dongryel/thesis_research/core/table/sub_dense_matrix.h

@@ -93,7 +93,7 @@ class SubDenseMatrix {
     }
     BOOST_SERIALIZATION_SPLIT_MEMBER()
 };
-};
-};
+}
+}
 
 #endif

fastlib/trunk/contrib/dongryel/thesis_research/core/table/transform.h

@@ -47,7 +47,7 @@ class Standardize {
       }
     }
 };
-};
-};
+}
+}
 
 #endif

fastlib/trunk/contrib/dongryel/thesis_research/core/tree/general_spacetree.h

@@ -26,6 +26,8 @@ extern core::table::MemoryMappedFile *global_m_file_;
 namespace core {
 namespace tree {
 
+/** @brief The utility to initialize old_from_new indices.
+ */
 template<typename IndexType>
 class IndexInitializer {
   public:
@@ -43,6 +45,9 @@ class IndexInitializer {
       int *new_from_old_out);
 };
 
+/** @brief The template specialization of IndexInitializer for the
+ *         distributed table setting.
+ */
 template<>
 class IndexInitializer< std::pair<int, std::pair<int, int> > > {
   public:
@@ -73,6 +78,9 @@ class IndexInitializer< std::pair<int, std::pair<int, int> > > {
     }
 };
 
+/** @brief The template specialization of IndexInitializer for the
+ *         ordinary table setting.
+ */
 template<>
 class IndexInitializer< int > {
   public:
@@ -524,8 +532,6 @@ class GeneralBinarySpaceTree {
         }
 
         if(left > right) {
-
-          // left == right + 1
           break;
         }
 

fastlib/trunk/contrib/dongryel/thesis_research/physpack/nbody_simulator/axilrod_teller.h

@@ -161,7 +161,7 @@ class AxilrodTeller {
       return numerator / denominator / normalizing_constant_;
     }
 };
-};
-};
+}
+}
 
 #endif

fastlib/trunk/contrib/dongryel/thesis_research/physpack/nbody_simulator/nbody_simulator.h

@@ -81,7 +81,7 @@ class NbodySimulator {
       const std::vector<std::string> &args,
       boost::program_options::variables_map *vm);
 };
-};
-};
+}
+}
 
 #endif

fastlib/trunk/contrib/dongryel/thesis_research/physpack/nbody_simulator/nbody_simulator.test.cc

@@ -193,8 +193,8 @@ class TestNbodySimulator {
       return 0;
     };
 };
-};
-};
+}
+}
 
 BOOST_AUTO_TEST_SUITE(TestSuiteNbodySimulator)
 BOOST_AUTO_TEST_CASE(TestCaseNbodySimulator) {

fastlib/trunk/contrib/dongryel/thesis_research/physpack/nbody_simulator/nbody_simulator_arguments.h

@@ -52,7 +52,7 @@ class NbodySimulatorArguments {
       }
     }
 };
-};
-};
+}
+}
 
 #endif

fastlib/trunk/contrib/dongryel/thesis_research/physpack/nbody_simulator/nbody_simulator_tripletree.h

@@ -870,7 +870,7 @@ class NbodySimulatorStatistic: public boost::noncopyable {
       SetZero();
     }
 };
-};
-};
+}
+}
 
 #endif