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mlpack/fastlib/trilinos/include/Epetra_FEVector.h
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//@HEADER
/*
************************************************************************
Epetra: Linear Algebra Services Package
Copyright (2001) Sandia Corporation
Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
license for use of this work by or on behalf of the U.S. Government.
This library is free software; you can redistribute it and/or modify
it under the terms of the GNU Lesser General Public License as
published by the Free Software Foundation; either version 2.1 of the
License, or (at your option) any later version.
This library is distributed in the hope that it will be useful, but
WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307
USA
Questions? Contact Michael A. Heroux (maherou@sandia.gov)
************************************************************************
*/
//@HEADER
#ifndef EPETRA_FEVECTOR_H
#define EPETRA_FEVECTOR_H
#include <Epetra_CombineMode.h>
#include <Epetra_Map.h>
#include <Epetra_MultiVector.h>
class Epetra_IntSerialDenseVector;
class Epetra_SerialDenseVector;
/** Epetra Finite-Element Vector. This class inherits Epetra_MultiVector
and thus provides all Epetra_MultiVector functionality, with one
restriction: currently an Epetra_FEVector only has 1 internal vector.
The added functionality provided by Epetra_FEVector is the ability to
perform finite-element style vector assembly. It accepts sub-vector
contributions, such as those that would come from element-load vectors, etc.,
and these sub-vectors need not be wholly locally owned. In other words, the
user can assemble overlapping data (e.g., corresponding to shared
finite-element nodes). When the user is finished assembling their vector
data, they then call the method Epetra_FEVector::GlobalAssemble() which
gathers the overlapping data (all non-local data that was input on each
processor) into the data-distribution specified by the map that the
Epetra_FEVector is constructed with.
Note: At the current time (Sept 6, 2002) the methods in this implementation
assume that there is only 1 point associated with each map element. This
limitation will be removed in the near future.
*/
class Epetra_FEVector : public Epetra_MultiVector {
public:
/** Constructor that requires a map specifying a non-overlapping
data layout. The methods SumIntoGlobalValues() and
ReplaceGlobalValues() will accept any global IDs, and GlobalAssemble()
will move any non-local data onto the appropriate owning processors.
*/
Epetra_FEVector(const Epetra_BlockMap& Map,
bool ignoreNonLocalEntries=false);
/** Copy constructor. */
Epetra_FEVector(const Epetra_FEVector& source);
/** Destructor */
virtual ~Epetra_FEVector();
/** Accumulate values into the vector, adding them to any values that
already exist for the specified indices.
*/
int SumIntoGlobalValues(int numIDs, const int* GIDs, const double* values);
/** Accumulate values into the vector, adding them to any values that
already exist for the specified GIDs.
@param GIDs List of global ids. Must be the same length as the
accompanying list of values.
@param values List of coefficient values. Must be the same length as
the accompanying list of GIDs.
*/
int SumIntoGlobalValues(const Epetra_IntSerialDenseVector& GIDs,
const Epetra_SerialDenseVector& values);
/** Copy values into the vector overwriting any values that already exist
for the specified indices.
*/
int ReplaceGlobalValues(int numIDs, const int* GIDs, const double* values);
/** Copy values into the vector, replacing any values that
already exist for the specified GIDs.
@param GIDs List of global ids. Must be the same length as the
accompanying list of values.
@param values List of coefficient values. Must be the same length as
the accompanying list of GIDs.
*/
int ReplaceGlobalValues(const Epetra_IntSerialDenseVector& GIDs,
const Epetra_SerialDenseVector& values);
int SumIntoGlobalValues(int numIDs, const int* GIDs,
const int* numValuesPerID,
const double* values);
int ReplaceGlobalValues(int numIDs, const int* GIDs,
const int* numValuesPerID,
const double* values);
/** Gather any overlapping/shared data into the non-overlapping partitioning
defined by the Map that was passed to this vector at construction time.
Data imported from other processors is stored on the owning processor
with a "sumInto" or accumulate operation.
This is a collective method -- every processor must enter it before any
will complete it.
*/
int GlobalAssemble(Epetra_CombineMode mode = Add);
/** Set whether or not non-local data values should be ignored.
*/
void setIgnoreNonLocalEntries(bool flag) {
ignoreNonLocalEntries_ = flag;
}
Epetra_FEVector& operator=(const Epetra_FEVector& source);
private:
int inputValues(int numIDs,
const int* GIDs, const double* values,
bool accumulate);
int inputValues(int numIDs,
const int* GIDs, const int* numValuesPerID,
const double* values,
bool accumulate);
int inputNonlocalValue(int GID, double value, bool accumulate);
int inputNonlocalValues(int GID, int numValues, const double* values,
bool accumulate);
void destroyNonlocalData();
int myFirstID_;
int myNumIDs_;
double* myCoefs_;
int* nonlocalIDs_;
int* nonlocalElementSize_;
int numNonlocalIDs_;
int allocatedNonlocalLength_;
double** nonlocalCoefs_;
bool ignoreNonLocalEntries_;
};
#endif