848 lines
15 KiB
C++
848 lines
15 KiB
C++
// Copyright 2011-2017 Ryan Curtin (http://www.ratml.org/)
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// Copyright 2017 National ICT Australia (NICTA)
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//
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// Licensed under the Apache License, Version 2.0 (the "License");
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// you may not use this file except in compliance with the License.
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// You may obtain a copy of the License at
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// http://www.apache.org/licenses/LICENSE-2.0
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//
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// Unless required by applicable law or agreed to in writing, software
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// distributed under the License is distributed on an "AS IS" BASIS,
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// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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// See the License for the specific language governing permissions and
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// limitations under the License.
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// ------------------------------------------------------------------------
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#include <cstdio>
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#include <armadillo>
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#include "catch.hpp"
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using namespace arma;
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#if defined(ARMA_USE_HDF5)
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TEST_CASE("hdf5_u8_test")
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{
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arma::Mat<u8> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<u8> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<u8> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_u16_test")
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{
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arma::Mat<u16> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<u16> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<u16> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_u32_test")
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{
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arma::Mat<u32> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<u32> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<u32> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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#ifdef ARMA_USE_U64S64
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TEST_CASE("hdf5_u64_test")
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{
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arma::Mat<u64> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<u64> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<u64> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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#endif
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TEST_CASE("hdf5_s8_test")
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{
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arma::Mat<s8> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<s8> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<s8> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_s16_test")
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{
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arma::Mat<s16> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<s16> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<s16> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_s32_test")
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{
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arma::Mat<s32> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<s32> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<s32> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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#ifdef ARMA_USE_U64S64
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TEST_CASE("hdf5_s64_test")
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{
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arma::Mat<s64> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<s64> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<s64> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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#endif
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TEST_CASE("hdf5_char_test")
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{
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arma::Mat<char> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<char> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<char> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_int_test")
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{
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arma::Mat<signed int> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<signed int> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<signed int> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_uint_test")
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{
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arma::Mat<unsigned int> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<unsigned int> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<unsigned int> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_short_test")
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{
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arma::Mat<signed short> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<signed short> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<signed short> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_ushort_test")
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{
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arma::Mat<unsigned short> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<unsigned short> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<unsigned short> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_long_test")
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{
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arma::Mat<signed long> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<signed long> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<signed long> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_ulong_test")
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{
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arma::Mat<unsigned long> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<unsigned long> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<unsigned long> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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#ifdef ARMA_USE_U64S64
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TEST_CASE("hdf5_llong_test")
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{
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arma::Mat<signed long long> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<signed long long> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<signed long long> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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TEST_CASE("hdf5_ullong_test")
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{
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arma::Mat<unsigned long long> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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// Load as different matrix.
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arma::Mat<unsigned long long> b;
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b.load("file.h5", hdf5_binary);
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == b[i] );
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}
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// Now autoload.
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arma::Mat<unsigned long long> c;
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c.load("file.h5");
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// Check that they are the same.
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for (uword i = 0; i < a.n_elem; ++i)
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{
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REQUIRE( a[i] == c[i] );
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}
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std::remove("file.h5");
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}
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#endif
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TEST_CASE("hdf5_float_test")
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{
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arma::Mat<float> a;
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a.randu(20, 20);
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// Save first.
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a.save("file.h5", hdf5_binary);
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|
|
// Load as different matrix.
|
|
arma::Mat<float> b;
|
|
b.load("file.h5", hdf5_binary);
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < a.n_elem; ++i)
|
|
{
|
|
REQUIRE( a[i] == b[i] );
|
|
}
|
|
|
|
// Now autoload.
|
|
arma::Mat<float> c;
|
|
c.load("file.h5");
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < a.n_elem; ++i)
|
|
{
|
|
REQUIRE( a[i] == c[i] );
|
|
}
|
|
|
|
std::remove("file.h5");
|
|
}
|
|
|
|
|
|
|
|
TEST_CASE("hdf5_double_test")
|
|
{
|
|
arma::Mat<double> a;
|
|
a.randu(20, 20);
|
|
|
|
// Save first.
|
|
a.save("file.h5", hdf5_binary);
|
|
|
|
// Load as different matrix.
|
|
arma::Mat<double> b;
|
|
b.load("file.h5", hdf5_binary);
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < a.n_elem; ++i)
|
|
{
|
|
REQUIRE( a[i] == b[i] );
|
|
}
|
|
|
|
// Now autoload.
|
|
arma::Mat<double> c;
|
|
c.load("file.h5");
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < a.n_elem; ++i)
|
|
{
|
|
REQUIRE( a[i] == c[i] );
|
|
}
|
|
|
|
std::remove("file.h5");
|
|
}
|
|
|
|
|
|
|
|
TEST_CASE("hdf5_complex_float_test")
|
|
{
|
|
arma::Mat<std::complex<float> > a;
|
|
a.randu(20, 20);
|
|
|
|
// Save first.
|
|
a.save("file.h5", hdf5_binary);
|
|
|
|
// Load as different matrix.
|
|
arma::Mat<std::complex<float> > b;
|
|
b.load("file.h5", hdf5_binary);
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < a.n_elem; ++i)
|
|
{
|
|
REQUIRE( a[i] == b[i] );
|
|
}
|
|
|
|
// Now autoload.
|
|
arma::Mat<std::complex<float> > c;
|
|
c.load("file.h5");
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < a.n_elem; ++i)
|
|
{
|
|
REQUIRE( a[i] == c[i] );
|
|
}
|
|
|
|
std::remove("file.h5");
|
|
}
|
|
|
|
|
|
|
|
TEST_CASE("hdf5_complex_double_test")
|
|
{
|
|
arma::Mat<std::complex<double> > a;
|
|
a.randu(20, 20);
|
|
|
|
// Save first.
|
|
a.save("file.h5", hdf5_binary);
|
|
|
|
// Load as different matrix.
|
|
arma::Mat<std::complex<double> > b;
|
|
b.load("file.h5", hdf5_binary);
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < a.n_elem; ++i)
|
|
REQUIRE( a[i] == b[i] );
|
|
|
|
// Now autoload.
|
|
arma::Mat<std::complex<double> > c;
|
|
c.load("file.h5");
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < a.n_elem; ++i)
|
|
{
|
|
REQUIRE( a[i] == c[i] );
|
|
}
|
|
|
|
std::remove("file.h5");
|
|
}
|
|
|
|
|
|
|
|
TEST_CASE("hdf5_dataset_append_test")
|
|
{
|
|
arma::Mat<double> a;
|
|
a.randu(20, 20);
|
|
|
|
// Save first dataset.
|
|
a.save( hdf5_name("file.h5", "dataset1") );
|
|
|
|
arma::Mat<double> b;
|
|
b.randu(10, 10);
|
|
|
|
// Save second dataset.
|
|
b.save( hdf5_name("file.h5", "dataset2", hdf5_opts::append) );
|
|
|
|
// Load first dataset as different matrix.
|
|
arma::Mat<double> c;
|
|
c.load( hdf5_name("file.h5", "dataset1") );
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < a.n_elem; ++i)
|
|
{
|
|
REQUIRE( a[i] == c[i] );
|
|
}
|
|
|
|
// Load second dataset as different matrix.
|
|
arma::Mat<double> d;
|
|
d.load( hdf5_name("file.h5", "dataset2") );
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < b.n_elem; ++i)
|
|
{
|
|
REQUIRE( b[i] == d[i] );
|
|
}
|
|
|
|
std::remove("file.h5");
|
|
}
|
|
|
|
TEST_CASE("hdf5_cube_dataset_append_test")
|
|
{
|
|
arma::Mat<double> a;
|
|
a.randu(20, 20);
|
|
|
|
// Save first dataset.
|
|
a.save( hdf5_name("file.h5", "dataset1") );
|
|
|
|
arma::Cube<double> b;
|
|
b.randu(10, 10, 10);
|
|
|
|
// Save second dataset.
|
|
b.save( hdf5_name("file.h5", "dataset2", hdf5_opts::append) );
|
|
|
|
// Load first dataset as different matrix.
|
|
arma::Mat<double> c;
|
|
c.load( hdf5_name("file.h5", "dataset1") );
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < a.n_elem; ++i)
|
|
{
|
|
REQUIRE( a[i] == c[i] );
|
|
}
|
|
|
|
// Load second dataset as different matrix.
|
|
arma::Cube<double> d;
|
|
d.load( hdf5_name("file.h5", "dataset2") );
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < b.n_elem; ++i)
|
|
{
|
|
REQUIRE( b[i] == d[i] );
|
|
}
|
|
|
|
std::remove("file.h5");
|
|
}
|
|
|
|
|
|
TEST_CASE("hdf5_dataset_append-overwrite-test")
|
|
{
|
|
arma::Mat<double> a;
|
|
a.randu(20, 20);
|
|
|
|
// Save first dataset.
|
|
a.save( hdf5_name("file.h5", "dataset1") );
|
|
|
|
arma::Mat<double> b;
|
|
b.randu(10, 10);
|
|
|
|
// Save second dataset.
|
|
b.save( hdf5_name("file.h5", "dataset2") );
|
|
|
|
// Load first dataset as different matrix and check that first dataset has been overwritten.
|
|
arma::Mat<double> c;
|
|
REQUIRE_FALSE( c.load( hdf5_name("file.h5", "dataset1") ) );
|
|
|
|
// Load second dataset as different matrix.
|
|
arma::Mat<double> d;
|
|
d.load( hdf5_name("file.h5", "dataset2") );
|
|
|
|
// Check that they are the same.
|
|
for (uword i = 0; i < b.n_elem; ++i)
|
|
{
|
|
REQUIRE( b[i] == d[i] );
|
|
}
|
|
|
|
std::remove("file.h5");
|
|
}
|
|
|
|
|
|
|
|
TEST_CASE("hdf5_dataset_same_dataset_twice_test")
|
|
{
|
|
arma::Mat<double> a;
|
|
a.randu(20, 20);
|
|
|
|
// Save first dataset.
|
|
a.save(hdf5_name("file.h5", "dataset1"), hdf5_binary);
|
|
|
|
arma::Mat<double> b;
|
|
b.randu(10, 10);
|
|
|
|
// Append second dataset with same name, causing failure.
|
|
REQUIRE_FALSE( b.save(hdf5_name("file.h5", "dataset1", hdf5_opts::append) ) );
|
|
|
|
std::remove("file.h5");
|
|
}
|
|
|
|
#endif
|