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Arpack solver (#217)

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* TravisCI: fix ILP64 job. No need for security.debian.org.

* Extract arpackSolver.hpp from arpackmm.cpp.
arpackSolver.hpp is added in the install directory.
This commit is contained in:
Franck HOUSSEN
2019-07-08 13:11:25 +02:00
committed by Sylvestre Ledru
parent 6254162e2e
commit 6e2893f17f
7 changed files with 1294 additions and 1103 deletions
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.gitignore
+2 -2
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@@ -55,8 +55,8 @@ EXAMPLES/SIMPLE/[sdcz]nsimp
EXAMPLES/SVD/[sd]svd
EXAMPLES/SYM/[sd]sdrv[123456]
EXAMPLES/MATRIX_MARKET/arpackmm
EXAMPLES/MATRIX_MARKET/arpackmm.resid.out
EXAMPLES/MATRIX_MARKET/arpackmm.v.out
EXAMPLES/MATRIX_MARKET/arpackSolver.resid.out
EXAMPLES/MATRIX_MARKET/arpackSolver.v.out
PARPACK/EXAMPLES/MPI/p[sd]ndrv[13]
PARPACK/EXAMPLES/MPI/p[sd]sdrv1
PARPACK/EXAMPLES/MPI/p[cz]ndrv1
CHANGES
+1
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@@ -4,6 +4,7 @@ arpack-ng - 3.8.0
* [BUG FIX]: fix 'Unknown CMake command "check_symbol_exists".' when ICB=ON.
[ Franck Houssen ]
* extract arpackSolver.hpp from arpakmm.cpp.
* [BUG FIX] fix cmake/pc files: enable linking from outside (add blas, lapack, eigen).
* arpackmm: add --slvItrPC option (PC: Jacobi, ILU).
* arpackmm: add --slv LLT LDLT (for SPD matrices).
CMakeLists.txt
+3
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@@ -271,6 +271,9 @@ if(ICB)
install(FILES ICB/parpack.h DESTINATION include/arpack)
install(FILES ICB/parpack.hpp DESTINATION include/arpack)
endif()
if (ICBEXMM)
install(FILES EXAMPLES/MATRIX_MARKET/arpackSolver.hpp DESTINATION include/arpack)
endif()
endif()
install(FILES debug.h DESTINATION include/arpack)
EXAMPLES/MATRIX_MARKET/Makefile.am
+4
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@@ -11,4 +11,8 @@ TESTS = arpackmm.sh
arpackmm_SOURCES = arpackmm.cpp
if ICBEXMM
pkginclude_HEADERS = arpackSolver.hpp
endif
CLEANFILES = arpackmm.resid.out arpackmm.v.out
EXAMPLES/MATRIX_MARKET/arpackSolver.hpp
+1039
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EXAMPLES/MATRIX_MARKET/arpackmm.cpp
+237 -1093
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File diff suppressed because it is too large Load Diff
EXAMPLES/MATRIX_MARKET/arpackmm.sh
+8 -8
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@@ -16,13 +16,13 @@ do
export shiftOpt=""
if [[ "$eigPb" == *nonSymPb* ]]; then
if [[ "$genPb" == *genPb* ]]; then
export shiftOpt="--shiftReal 2.5 --shiftImag 2.5 --tol 0.5" # Relax tolerance, tricky to converge.
continue # Skip to ensure stable test: tricky to convergence.
else
export shiftOpt="--shiftReal 100.0 --shiftImag 100.0"
fi
else
if [[ "$genPb" == *genPb* ]]; then
export shiftOpt="--shiftReal 50.0"
continue # Skip to ensure stable test: tricky to convergence.
else
export shiftOpt="--shiftReal 100.0"
fi
@@ -34,11 +34,11 @@ do
do
for tol in "" "--tol 1.e-5"
do
for slv in "--slv BiCG --slvItrTol 1.e-07 --slvItrMaxIt 150" "--slv CG --slvItrTol 1.e-07 --slvItrMaxIt 150" \
for slv in "--slv BiCG --slvItrTol 1.e-06 --slvItrMaxIt 150" "--slv CG --slvItrTol 1.e-06 --slvItrMaxIt 150" \
"--slv BiCG --slvItrPC ILU" "--slv CG --slvItrPC ILU#1.e-06#2" \
"--slv LU" "--slv QR#1.e-06" \
"--slv LLT" "--slv LLT#0.#1." \
"--slv LDLT" "--slv LDLT#0.#1."
"--slv LU" "--slv QR --slvDrtPivot 1.e-06" \
"--slv LLT" "--slv LLT --slvDrtOffset 0." \
"--slv LDLT" "--slv LDLT --slvDrtScale 1."
do
for rs in "" "--schur"
do
@@ -69,8 +69,8 @@ do
fi
fi
# Run arpackmm: use --nbCV 6 to ease convergence, and, --verbose 3 for debug.
export CMD="./arpackmm $eigPb $genPb $smallMag $shiftRI $invert $tol $slv $rs $dsPrec $dsMat $extraGenPb --nbCV 6 --verbose 3 --debug 3"
# Run arpackmm: use --nbCV 6 and --maxIt 200 to ease convergence, and, --verbose 3 for debug.
export CMD="./arpackmm $eigPb $genPb $smallMag $shiftRI $invert $tol $slv $rs $dsPrec $dsMat $extraGenPb --nbCV 6 --maxIt 200 --verbose 3 --debug 3"
echo "$CMD"
eval "$CMD &> arpackmm.run.log"
echo ""