Compare commits
6
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| Author | SHA1 | Date | |
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967908029f | ||
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8560248ea4 | ||
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fa85cf2471 | ||
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8b34881d46 | ||
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de0cad550d | ||
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1f7f84d7a2 |
+1
-15
@@ -145,14 +145,6 @@ examples/petsc/velocity.*
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examples/petsc/elastic_energy.*
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examples/petsc/mode_*
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||||
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||||
examples/arpack/ex11
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||||
examples/arpack/mode_*
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||||
examples/arpack/ex11.mesh
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||||
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||||
examples/spectra/ex11
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examples/spectra/mode_*
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examples/spectra/ex11.mesh
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examples/pumi/ex1
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||||
examples/pumi/ex[126]p
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examples/pumi/refined.mesh
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@@ -318,13 +310,7 @@ tests/convergence/prates
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tests/par-mesh-format/ex1p
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||||
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# VPATH builds
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||||
build-*/
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||||
|
||||
# User config
|
||||
user-*
|
||||

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||||
# VSCode
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||||
.vscode
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||||
build-*/*
|
||||
|
||||
# PETSc automated build
|
||||
petsc-build/*
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||||
|
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@@ -27,9 +27,6 @@ Version 4.3.1 (development)
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functions on wedges and pyramids which are not amenable to reordering. The
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ReorientTetMesh method of the Mesh and ParMesh classes has been deprecated.
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- Gmsh meshes where all elements have zero physical tag (the default Gmsh
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||||
output format if no physical groups are defined) are now successfully loaded,
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and elements are reassigned attribute number 1.
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Version 4.3, released on July 29, 2021
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======================================
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@@ -175,6 +175,10 @@ else()
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set(MFEM_DEBUG OFF)
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endif()
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if (WIN32)
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add_definitions(-D_USE_MATH_DEFINES)
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endif()
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# MPI -> hypre; PETSc (optional)
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if (MFEM_USE_MPI)
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find_package(MPI REQUIRED)
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@@ -91,12 +91,6 @@
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// Enable MFEM functionality based on the SuiteSparse library.
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// #define MFEM_USE_SUITESPARSE
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||||
// Enable MFEM functionality based on the ARPACK library.
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||||
// #define MFEM_USE_ARPACK
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||||
|
||||
// Enable MFEM functionality based on the SPECTRA library.
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// #define MFEM_USE_SPECTRA
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||||
// Enable MFEM functionality based on the SuperLU library.
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||||
// #define MFEM_USE_SUPERLU
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// #define MFEM_USE_SUPERLU5
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@@ -31,8 +31,6 @@ MFEM_TIMER_TYPE = @MFEM_TIMER_TYPE@
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MFEM_USE_SUNDIALS = @MFEM_USE_SUNDIALS@
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MFEM_USE_MESQUITE = @MFEM_USE_MESQUITE@
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MFEM_USE_SUITESPARSE = @MFEM_USE_SUITESPARSE@
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MFEM_USE_ARPACK = @MFEM_USE_ARPACK@
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MFEM_USE_SPECTRA = @MFEM_USE_SPECTRA@
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MFEM_USE_SUPERLU = @MFEM_USE_SUPERLU@
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MFEM_USE_SUPERLU5 = @MFEM_USE_SUPERLU5@
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MFEM_USE_MUMPS = @MFEM_USE_MUMPS@
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@@ -151,8 +151,6 @@ MFEM_USE_UMPIRE = NO
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MFEM_USE_SIMD = NO
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MFEM_USE_ADIOS2 = NO
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MFEM_USE_MKL_CPARDISO = NO
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||||
MFEM_USE_ARPACK = NO
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||||
MFEM_USE_SPECTRA = NO
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# MPI library compile and link flags
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# These settings are used only when building MFEM with MPI + HIP
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@@ -330,19 +328,6 @@ NETCDF_LIB = $(XLINKER)-rpath,$(NETCDF_DIR)/lib -L$(NETCDF_DIR)/lib\
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$(XLINKER)-rpath,$(HDF5_DIR)/lib -L$(HDF5_DIR)/lib\
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-lnetcdf -lhdf5_hl -lhdf5 $(ZLIB_LIB)
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# ARPACK library configuration
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ARPACK_DIR = @MFEM_DIR@/../ARPACK
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ARPACK_OPT = -I$(ARPACK_DIR)
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ARPACK_LIB = -L$(ARPACK_DIR) -lparpack -larpack
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|
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# EIGEN library configuration
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EIGEN_DIR = @MFEM_DIR@/../eigen
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EIGEN_OPT = -I$(EIGEN_DIR)
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|
||||
# SPECTRA library configuration
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SPECTRA_DIR = @MFEM_DIR@/../spectra/include
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SPECTRA_OPT = -I$(SPECTRA_DIR) $(EIGEN_OPT)
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||||
|
||||
# PETSc library configuration (version greater or equal to 3.8 or the dev branch)
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PETSC_ARCH := arch-linux2-c-debug
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PETSC_DIR := $(MFEM_DIR)/../petsc/$(PETSC_ARCH)
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@@ -1,47 +0,0 @@
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Mesh.Algorithm = 6;
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||||
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lc = 0.1;
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Point(1) = {0.0,0.0,0.0,lc};
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||||
Point(2) = {1,0.0,0.0,lc};
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||||
Point(3) = {0,1,0.0,lc};
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||||
Circle(1) = {2,1,3};
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||||
Point(4) = {-1,0,0.0,lc};
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||||
Point(5) = {0,-1,0.0,lc};
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||||
Circle(2) = {3,1,4};
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||||
Circle(3) = {4,1,5};
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||||
Circle(4) = {5,1,2};
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Point(6) = {0,0,-1,lc};
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Point(7) = {0,0,1,lc};
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||||
Circle(5) = {3,1,6};
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Circle(6) = {6,1,5};
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Circle(7) = {5,1,7};
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Circle(8) = {7,1,3};
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Circle(9) = {2,1,7};
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Circle(10) = {7,1,4};
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Circle(11) = {4,1,6};
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Circle(12) = {6,1,2};
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Curve Loop(13) = {2,8,-10};
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Surface(14) = {13};
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Curve Loop(15) = {10,3,7};
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Surface(16) = {15};
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Curve Loop(17) = {-8,-9,1};
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Surface(18) = {17};
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Curve Loop(19) = {-11,-2,5};
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Surface(20) = {19};
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Curve Loop(21) = {-5,-12,-1};
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Surface(22) = {21};
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Curve Loop(23) = {-3,11,6};
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Surface(24) = {23};
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Curve Loop(25) = {-7,4,9};
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Surface(26) = {25};
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Curve Loop(27) = {-4,12,-6};
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Surface(28) = {27};
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Surface Loop(29) = {28,26,16,14,20,24,22,18};
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||||
Volume(30) = {29};
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||||
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||||
Physical Surface(1) = {28,26,16,14,20,24,22,18};
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Physical Volume(2) = 30;
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||||
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||||
// Generate 2D mesh
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Mesh 2;
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||||
Mesh.MshFileVersion = 2.2;
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||||
-4793
File diff suppressed because it is too large
Load Diff
@@ -1,286 +0,0 @@
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||||
// MFEM Example 11 - Serial Version
|
||||
//
|
||||
// Compile with: make ex11
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||||
//
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||||
// Sample runs: ex11 -m ../data/square-disc.mesh
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||||
// ex11 -m ../data/star.mesh
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||||
// ex11 -m ../data/star-mixed.mesh
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||||
// ex11 -m ../data/periodic-annulus-sector.msh
|
||||
// ex11 -m ../data/square-disc-p2.vtk -o 2
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||||
// ex11 -m ../data/square-disc-p3.mesh -o 3
|
||||
// ex11 -m ../data/square-disc-nurbs.mesh -o -1
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||||
// ex11 -m ../data/disc-nurbs.mesh -o -1 -n 20
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||||
// ex11 -m ../data/star-surf.mesh
|
||||
// ex11 -m ../data/square-disc-surf.mesh
|
||||
// ex11 -m ../data/inline-segment.mesh
|
||||
// ex11 -m ../data/inline-quad.mesh
|
||||
// ex11 -m ../data/inline-tri.mesh
|
||||
// ex11 -m ../data/amr-quad.mesh
|
||||
// ex11 -m ../data/amr-hex.mesh
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||||
// ex11 -m ../data/mobius-strip.mesh -n 8
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||||
//
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||||
// Description: This example code demonstrates the use of MFEM to solve the
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||||
// eigenvalue problem -Delta u = lambda u with homogeneous
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||||
// Dirichlet boundary conditions.
|
||||
//
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||||
// We compute a number of the lowest eigenmodes by discretizing
|
||||
// the Laplacian and Mass operators using a FE space of the
|
||||
// specified order, or an isoparametric/isogeometric space if
|
||||
// order < 1 (quadratic for quadratic curvilinear mesh, NURBS for
|
||||
// NURBS mesh, etc.)
|
||||
//
|
||||
// The example highlights the use of the ARPACK eigenvalue solver
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||||
// (regular inverse mode). Reusing a single GLVis visualization
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||||
// window for multiple eigenfunctions is also illustrated.
|
||||
//
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||||
// We recommend viewing Example 1 before viewing this example.
|
||||
|
||||
#include "mfem.hpp"
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||||
#include <fstream>
|
||||
#include <iostream>
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||||
|
||||
using namespace std;
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||||
using namespace mfem;
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||||
|
||||
int main(int argc, char *argv[])
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||||
{
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||||
// 1. Parse command-line options.
|
||||
const char *mesh_file = "../../data/star.mesh";
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||||
int ser_ref_levels = 3;
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||||
int order = 1;
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||||
int nev = 5;
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||||
double dbc_eig = 1e3;
|
||||
bool visualization = 1;
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||||
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||||
OptionsParser args(argc, argv);
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||||
args.AddOption(&mesh_file, "-m", "--mesh",
|
||||
"Mesh file to use.");
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||||
args.AddOption(&ser_ref_levels, "-rs", "--refine-serial",
|
||||
"Number of times to refine the mesh uniformly in serial.");
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||||
args.AddOption(&order, "-o", "--order",
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||||
"Finite element order (polynomial degree) or -1 for"
|
||||
" isoparametric space.");
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||||
args.AddOption(&nev, "-n", "--num-eigs",
|
||||
"Number of desired eigenmodes.");
|
||||
args.AddOption(&dbc_eig, "-d", "--dbc-eig",
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||||
"Eigenvalues associated with Dirichlet BC "
|
||||
"(should be larger than the maximum desired eigenvalue).");
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||||
args.AddOption(&visualization, "-vis", "--visualization", "-no-vis",
|
||||
"--no-visualization",
|
||||
"Enable or disable GLVis visualization.");
|
||||
args.Parse();
|
||||
if (!args.Good())
|
||||
{
|
||||
args.PrintUsage(cout);
|
||||
return 1;
|
||||
}
|
||||
args.PrintOptions(cout);
|
||||
|
||||
// 2. Read the (serial) mesh from the given mesh file on all processors. We
|
||||
// can handle triangular, quadrilateral, tetrahedral, hexahedral, surface
|
||||
// and volume meshes with the same code.
|
||||
Mesh *mesh;
|
||||
ifstream imesh(mesh_file);
|
||||
if (!imesh)
|
||||
{
|
||||
cerr << "\nCan not open mesh file: " << mesh_file << '\n' << endl;
|
||||
return 2;
|
||||
}
|
||||
mesh = new Mesh(imesh, 1, 1);
|
||||
imesh.close();
|
||||
int dim = mesh->Dimension();
|
||||
|
||||
// 3. Refine the serial mesh on all processors to increase the resolution. In
|
||||
// this example we do 'ref_levels' of uniform refinement (2 by default, or
|
||||
// specified on the command line with -rs).
|
||||
for (int lev = 0; lev < ser_ref_levels; lev++)
|
||||
{
|
||||
mesh->UniformRefinement();
|
||||
}
|
||||
|
||||
// 4. Define a finite element space on the mesh. Here we
|
||||
// use continuous Lagrange finite elements of the specified order. If
|
||||
// order < 1, we instead use an isoparametric/isogeometric space.
|
||||
FiniteElementCollection *fec;
|
||||
if (order > 0)
|
||||
{
|
||||
fec = new H1_FECollection(order, dim);
|
||||
}
|
||||
else if (mesh->GetNodes())
|
||||
{
|
||||
fec = mesh->GetNodes()->OwnFEC();
|
||||
}
|
||||
else
|
||||
{
|
||||
fec = new H1_FECollection(order = 1, dim);
|
||||
}
|
||||
FiniteElementSpace *fespace = new FiniteElementSpace(mesh, fec);
|
||||
int size = fespace->GetVSize();
|
||||
|
||||
cout << "Number of unknowns: " << size << endl;
|
||||
|
||||
// 5. Set up the parallel bilinear forms a(.,.) and m(.,.) on the finite
|
||||
// element space. The first corresponds to the Laplacian operator -Delta,
|
||||
// while the second is a simple mass matrix needed on the right hand side
|
||||
// of the generalized eigenvalue problem below. The boundary conditions
|
||||
// are implemented by elimination with special values on the diagonal to
|
||||
// shift the Dirichlet eigenvalues out of the computational range. After
|
||||
// serial and parallel assembly we extract the corresponding parallel
|
||||
// matrices A and M.
|
||||
ConstantCoefficient one(1.0);
|
||||
Array<int> ess_bdr;
|
||||
if (mesh->bdr_attributes.Size())
|
||||
{
|
||||
ess_bdr.SetSize(mesh->bdr_attributes.Max());
|
||||
ess_bdr = 1;
|
||||
}
|
||||
|
||||
BilinearForm *a = new BilinearForm(fespace);
|
||||
a->AddDomainIntegrator(new DiffusionIntegrator(one));
|
||||
if (mesh->bdr_attributes.Size() == 0)
|
||||
{
|
||||
// Add a mass term if the mesh has no boundary, e.g. periodic mesh or
|
||||
// closed surface.
|
||||
a->AddDomainIntegrator(new MassIntegrator(one));
|
||||
}
|
||||
a->Assemble();
|
||||
if (mesh->bdr_attributes.Size() != 0)
|
||||
{
|
||||
a->EliminateEssentialBCDiag(ess_bdr, dbc_eig);
|
||||
}
|
||||
a->Finalize();
|
||||
|
||||
BilinearForm *m = new BilinearForm(fespace);
|
||||
m->AddDomainIntegrator(new MassIntegrator(one));
|
||||
m->Assemble();
|
||||
if (mesh->bdr_attributes.Size() != 0)
|
||||
{
|
||||
// shift the eigenvalue corresponding to eliminated dofs to a large value
|
||||
m->EliminateEssentialBCDiag(ess_bdr, 1.0);
|
||||
}
|
||||
m->Finalize();
|
||||
|
||||
// 6. Define and configure the ARPACK eigensolver
|
||||
ArPackSym * arpack = new ArPackSym();
|
||||
Solver * solver = NULL;
|
||||
|
||||
#ifndef MFEM_USE_SUITESPARSE
|
||||
// 7. Define a simple symmetric Gauss-Seidel preconditioner and use it to
|
||||
// solve the system A X = B with PCG.
|
||||
cout << "Building CGSolver" << endl;
|
||||
GSSmoother M(m->SpMat());
|
||||
CGSolver * cg_solver = new CGSolver;
|
||||
cg_solver->SetPreconditioner(M);
|
||||
cg_solver->SetRelTol(1.0e-12);
|
||||
solver = cg_solver;
|
||||
#else
|
||||
// 7. If MFEM was compiled with SuiteSparse, use UMFPACK to solve the system.
|
||||
cout << "Building UMFPackSolver" << endl;
|
||||
UMFPackSolver * umf_solver = new UMFPackSolver;
|
||||
umf_solver->Control[UMFPACK_ORDERING] = UMFPACK_ORDERING_METIS;
|
||||
solver = umf_solver;
|
||||
#endif
|
||||
solver->SetOperator(m->SpMat());
|
||||
|
||||
arpack->SetNumModes(nev);
|
||||
arpack->SetMaxIter(400);
|
||||
arpack->SetTol(1e-8);
|
||||
arpack->SetMode(2);
|
||||
arpack->SetPrintLevel(2);
|
||||
|
||||
arpack->SetOperator(*a);
|
||||
arpack->SetMassMatrix(*m);
|
||||
arpack->SetSolver(*solver);
|
||||
|
||||
// 8. Compute the eigenmodes and extract the array of eigenvalues. Define a
|
||||
// parallel grid function to represent each of the eigenmodes returned by
|
||||
// the solver.
|
||||
Array<double> eigenvalues;
|
||||
arpack->Solve();
|
||||
arpack->GetEigenvalues(eigenvalues);
|
||||
|
||||
cout << endl;
|
||||
std::ios::fmtflags old_fmt = cout.flags();
|
||||
cout.setf(std::ios::scientific);
|
||||
std::streamsize old_prec = cout.precision(14);
|
||||
for (int i=0; i<nev; i++)
|
||||
{
|
||||
cout << "Eigenvalue lambda " << eigenvalues[i] << endl;
|
||||
}
|
||||
cout.precision(old_prec);
|
||||
cout.flags(old_fmt);
|
||||
cout << endl;
|
||||
|
||||
GridFunction x(fespace);
|
||||
|
||||
// 9. Save the refined mesh and the modes in parallel. This output can be
|
||||
// viewed later using GLVis: "glvis -np <np> -m mesh -g mode".
|
||||
{
|
||||
ostringstream mesh_name, mode_name;
|
||||
mesh_name << "ex11.mesh";
|
||||
|
||||
ofstream mesh_ofs(mesh_name.str().c_str());
|
||||
mesh_ofs.precision(8);
|
||||
mesh->Print(mesh_ofs);
|
||||
|
||||
for (int i=0; i<nev; i++)
|
||||
{
|
||||
// convert eigenvector from HypreParVector to ParGridFunction
|
||||
x = arpack->GetEigenvector(i);
|
||||
|
||||
mode_name << "mode_" << setfill('0') << setw(2) << i;
|
||||
|
||||
ofstream mode_ofs(mode_name.str().c_str());
|
||||
mode_ofs.precision(8);
|
||||
x.Save(mode_ofs);
|
||||
mode_name.str("");
|
||||
}
|
||||
}
|
||||
|
||||
// 10. Send the solution by socket to a GLVis server.
|
||||
if (visualization)
|
||||
{
|
||||
char vishost[] = "localhost";
|
||||
int visport = 19916;
|
||||
socketstream mode_sock(vishost, visport);
|
||||
mode_sock.precision(8);
|
||||
|
||||
for (int i=0; i<nev; i++)
|
||||
{
|
||||
cout << "Eigenmode " << i+1 << '/' << nev
|
||||
<< ", Lambda = " << eigenvalues[i] << endl;
|
||||
|
||||
// convert eigenvector from HypreParVector to ParGridFunction
|
||||
x = arpack->GetEigenvector(i);
|
||||
|
||||
mode_sock << "solution\n" << *mesh << x << flush
|
||||
<< "window_title 'Eigenmode " << i+1 << '/' << nev
|
||||
<< ", Lambda = " << eigenvalues[i] << "'" << endl;
|
||||
|
||||
char c;
|
||||
cout << "press (q)uit or (c)ontinue --> " << flush;
|
||||
cin >> c;
|
||||
|
||||
if (c != 'c')
|
||||
{
|
||||
break;
|
||||
}
|
||||
}
|
||||
mode_sock.close();
|
||||
}
|
||||
|
||||
// 11. Free the used memory.
|
||||
delete arpack;
|
||||
delete solver;
|
||||
delete m;
|
||||
delete a;
|
||||
|
||||
delete fespace;
|
||||
if (order > 0)
|
||||
{
|
||||
delete fec;
|
||||
}
|
||||
delete mesh;
|
||||
|
||||
return 0;
|
||||
}
|
||||
@@ -1,69 +0,0 @@
|
||||
# Copyright (c) 2010-2021, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
# This file is part of the MFEM library. For more information and source code
|
||||
# availability visit https://mfem.org.
|
||||
#
|
||||
# MFEM is free software; you can redistribute it and/or modify it under the
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
# Use the MFEM build directory
|
||||
MFEM_DIR ?= ../..
|
||||
MFEM_BUILD_DIR ?= ../..
|
||||
SRC = $(if $(MFEM_DIR:../..=),$(MFEM_DIR)/examples/arpack/,)
|
||||
CONFIG_MK = $(MFEM_BUILD_DIR)/config/config.mk
|
||||
# Use the MFEM install directory
|
||||
# MFEM_INSTALL_DIR = ../../mfem
|
||||
# CONFIG_MK = $(MFEM_INSTALL_DIR)/share/mfem/config.mk
|
||||
|
||||
MFEM_LIB_FILE = mfem_is_not_built
|
||||
-include $(CONFIG_MK)
|
||||
|
||||
SEQ_EXAMPLES = ex11
|
||||
PAR_EXAMPLES =
|
||||
ifeq ($(MFEM_USE_MPI),NO)
|
||||
EXAMPLES = $(SEQ_EXAMPLES)
|
||||
else
|
||||
EXAMPLES = $(PAR_EXAMPLES)
|
||||
endif
|
||||
RC_FILES = $(patsubst $(SRC)%,%,$(wildcard $(SRC)rc_*))
|
||||
|
||||
.SUFFIXES:
|
||||
.SUFFIXES: .o .cpp .mk
|
||||
.PHONY: all clean clean-build clean-exec
|
||||
|
||||
# Remove built-in rule
|
||||
%: %.cpp
|
||||
|
||||
# Replace the default implicit rule for *.cpp files
|
||||
%: $(SRC)%.cpp $(MFEM_LIB_FILE) $(CONFIG_MK)
|
||||
$(MFEM_CXX) $(MFEM_FLAGS) $< -o $@ $(MFEM_LIBS)
|
||||
|
||||
all: $(EXAMPLES)
|
||||
|
||||
# Examples depend on their corresponding rc_* files:
|
||||
make-rc-rule = $(1): | $(filter rc_$(1)%,$(RC_FILES))
|
||||
$(foreach ex,$(EXAMPLES),$(eval $(call make-rc-rule,$(ex))))
|
||||
|
||||
# Rules to copy the rc_* files when building out-of-source:
|
||||
ifneq ($(SRC),)
|
||||
$(RC_FILES): %: $(SRC)%
|
||||
cp -pf $(<) .
|
||||
endif
|
||||
|
||||
# Generate an error message if the MFEM library is not built and exit
|
||||
$(MFEM_LIB_FILE):
|
||||
$(error The MFEM library is not built)
|
||||
|
||||
clean: clean-build clean-exec
|
||||
|
||||
clean-build:
|
||||
rm -f *.o *~ $(SEQ_EXAMPLES) $(PAR_EXAMPLES)
|
||||
rm -rf *.dSYM *.TVD.*breakpoints
|
||||
|
||||
clean-exec:
|
||||
@rm -rf mesh.* sol.* sol_p.* sol_u.* Example5*
|
||||
@rm -f ex9-mesh.* ex9-init.* ex9-final.* Example9*
|
||||
@rm -f deformed.* velocity.* elastic_energy.*
|
||||
+1
-1
@@ -92,7 +92,7 @@ class PMLDiagMatrixCoefficient : public VectorCoefficient
|
||||
{
|
||||
private:
|
||||
CartesianPML * pml = nullptr;
|
||||
void (*Function)(const Vector &, CartesianPML * , Vector &);
|
||||
void (*Function)(const Vector &, CartesianPML *, Vector &);
|
||||
public:
|
||||
PMLDiagMatrixCoefficient(int dim, void(*F)(const Vector &, CartesianPML *,
|
||||
Vector &),
|
||||
|
||||
+1
-1
@@ -92,7 +92,7 @@ class PMLDiagMatrixCoefficient : public VectorCoefficient
|
||||
{
|
||||
private:
|
||||
CartesianPML * pml = nullptr;
|
||||
void (*Function)(const Vector &, CartesianPML * , Vector &);
|
||||
void (*Function)(const Vector &, CartesianPML *, Vector &);
|
||||
public:
|
||||
PMLDiagMatrixCoefficient(int dim, void(*F)(const Vector &, CartesianPML *,
|
||||
Vector &),
|
||||
|
||||
@@ -1,250 +0,0 @@
|
||||
// MFEM Example 11 - Serial Version
|
||||
//
|
||||
// Compile with: make ex11
|
||||
//
|
||||
// Sample runs: ex11 -m ../data/square-disc.mesh
|
||||
// ex11 -m ../data/star.mesh
|
||||
// ex11 -m ../data/star-mixed.mesh
|
||||
// ex11 -m ../data/periodic-annulus-sector.msh
|
||||
// ex11 -m ../data/square-disc-p2.vtk -o 2
|
||||
// ex11 -m ../data/square-disc-p3.mesh -o 3
|
||||
// ex11 -m ../data/square-disc-nurbs.mesh -o -1
|
||||
// ex11 -m ../data/disc-nurbs.mesh -o -1 -n 20
|
||||
// ex11 -m ../data/star-surf.mesh
|
||||
// ex11 -m ../data/square-disc-surf.mesh
|
||||
// ex11 -m ../data/inline-segment.mesh
|
||||
// ex11 -m ../data/inline-quad.mesh
|
||||
// ex11 -m ../data/inline-tri.mesh
|
||||
// ex11 -m ../data/amr-quad.mesh
|
||||
// ex11 -m ../data/amr-hex.mesh
|
||||
// ex11 -m ../data/mobius-strip.mesh -n 8
|
||||
//
|
||||
// Description: This example code demonstrates the use of MFEM to solve the
|
||||
// eigenvalue problem -Delta u = lambda u with homogeneous
|
||||
// Dirichlet boundary conditions.
|
||||
//
|
||||
// We compute a number of the lowest eigenmodes by discretizing
|
||||
// the Laplacian and Mass operators using a FE space of the
|
||||
// specified order, or an isoparametric/isogeometric space if
|
||||
// order < 1 (quadratic for quadratic curvilinear mesh, NURBS for
|
||||
// NURBS mesh, etc.)
|
||||
//
|
||||
// The example highlights the use of the ARPACK eigenvalue solver
|
||||
// (regular inverse mode). Reusing a single GLVis visualization
|
||||
// window for multiple eigenfunctions is also illustrated.
|
||||
//
|
||||
// We recommend viewing Example 1 before viewing this example.
|
||||
|
||||
#include "mfem.hpp"
|
||||
#include <fstream>
|
||||
#include <iostream>
|
||||
|
||||
using namespace std;
|
||||
using namespace mfem;
|
||||
|
||||
int main(int argc, char *argv[])
|
||||
{
|
||||
// 1. Parse command-line options.
|
||||
const char *mesh_file = "../../data/star.mesh";
|
||||
int ser_ref_levels = 1;
|
||||
int order = 1;
|
||||
int nev = 5;
|
||||
double dbc_eig = 1e3;
|
||||
bool visualization = 1;
|
||||
|
||||
OptionsParser args(argc, argv);
|
||||
args.AddOption(&mesh_file, "-m", "--mesh",
|
||||
"Mesh file to use.");
|
||||
args.AddOption(&ser_ref_levels, "-rs", "--refine-serial",
|
||||
"Number of times to refine the mesh uniformly in serial.");
|
||||
args.AddOption(&order, "-o", "--order",
|
||||
"Finite element order (polynomial degree) or -1 for"
|
||||
" isoparametric space.");
|
||||
args.AddOption(&nev, "-n", "--num-eigs",
|
||||
"Number of desired eigenmodes.");
|
||||
args.AddOption(&dbc_eig, "-d", "--dbc-eig",
|
||||
"Eigenvalues associated with Dirichlet BC "
|
||||
"(should be larger than the maximum desired eigenvalue).");
|
||||
args.AddOption(&visualization, "-vis", "--visualization", "-no-vis",
|
||||
"--no-visualization",
|
||||
"Enable or disable GLVis visualization.");
|
||||
args.Parse();
|
||||
if (!args.Good())
|
||||
{
|
||||
args.PrintUsage(cout);
|
||||
return 1;
|
||||
}
|
||||
args.PrintOptions(cout);
|
||||
|
||||
// 2. Read the (serial) mesh from the given mesh file on all processors. We
|
||||
// can handle triangular, quadrilateral, tetrahedral, hexahedral, surface
|
||||
// and volume meshes with the same code.
|
||||
Mesh *mesh;
|
||||
ifstream imesh(mesh_file);
|
||||
if (!imesh)
|
||||
{
|
||||
cerr << "\nCan not open mesh file: " << mesh_file << '\n' << endl;
|
||||
return 2;
|
||||
}
|
||||
mesh = new Mesh(imesh, 1, 1);
|
||||
imesh.close();
|
||||
int dim = mesh->Dimension();
|
||||
|
||||
// 3. Refine the serial mesh on all processors to increase the resolution. In
|
||||
// this example we do 'ref_levels' of uniform refinement (2 by default, or
|
||||
// specified on the command line with -rs).
|
||||
for (int lev = 0; lev < ser_ref_levels; lev++)
|
||||
{
|
||||
mesh->UniformRefinement();
|
||||
}
|
||||
|
||||
// 4. Define a finite element space on the mesh. Here we
|
||||
// use continuous Lagrange finite elements of the specified order. If
|
||||
// order < 1, we instead use an isoparametric/isogeometric space.
|
||||
FiniteElementCollection *fec;
|
||||
if (order > 0)
|
||||
{
|
||||
fec = new H1_FECollection(order, dim);
|
||||
}
|
||||
else if (mesh->GetNodes())
|
||||
{
|
||||
fec = mesh->GetNodes()->OwnFEC();
|
||||
}
|
||||
else
|
||||
{
|
||||
fec = new H1_FECollection(order = 1, dim);
|
||||
}
|
||||
FiniteElementSpace *fespace = new FiniteElementSpace(mesh, fec);
|
||||
int size = fespace->GetVSize();
|
||||
|
||||
cout << "Number of unknowns: " << size << endl;
|
||||
|
||||
// 5. Set up the parallel bilinear forms a(.,.) and m(.,.) on the finite
|
||||
// element space. The first corresponds to the Laplacian operator -Delta,
|
||||
// while the second is a simple mass matrix needed on the right hand side
|
||||
// of the generalized eigenvalue problem below. The boundary conditions
|
||||
// are implemented by elimination with special values on the diagonal to
|
||||
// shift the Dirichlet eigenvalues out of the computational range. After
|
||||
// serial and parallel assembly we extract the corresponding parallel
|
||||
// matrices A and M.
|
||||
ConstantCoefficient one(1.0);
|
||||
Array<int> ess_bdr;
|
||||
if (mesh->bdr_attributes.Size())
|
||||
{
|
||||
ess_bdr.SetSize(mesh->bdr_attributes.Max());
|
||||
ess_bdr = 1;
|
||||
}
|
||||
|
||||
BilinearForm *a = new BilinearForm(fespace);
|
||||
a->AddDomainIntegrator(new DiffusionIntegrator(one));
|
||||
if (mesh->bdr_attributes.Size() == 0)
|
||||
{
|
||||
// Add a mass term if the mesh has no boundary, e.g. periodic mesh or
|
||||
// closed surface.
|
||||
a->AddDomainIntegrator(new MassIntegrator(one));
|
||||
}
|
||||
a->Assemble();
|
||||
if (mesh->bdr_attributes.Size() != 0)
|
||||
{
|
||||
a->EliminateEssentialBCDiag(ess_bdr, dbc_eig);
|
||||
}
|
||||
a->Finalize();
|
||||
|
||||
BilinearForm *m = new BilinearForm(fespace);
|
||||
m->AddDomainIntegrator(new MassIntegrator(one));
|
||||
m->Assemble();
|
||||
if (mesh->bdr_attributes.Size() != 0)
|
||||
{
|
||||
// shift the eigenvalue corresponding to eliminated dofs to a large value
|
||||
m->EliminateEssentialBCDiag(ess_bdr, 1.0);
|
||||
}
|
||||
m->Finalize();
|
||||
|
||||
// 6. Define and configure the SPECTRA eigensolver and solve problem
|
||||
SpectraEigenSolver spectra;
|
||||
|
||||
spectra.SetNumModes(nev)
|
||||
.SetKrylov(10)
|
||||
.SetMaxIter(5000)
|
||||
.SetTol(1e-5)
|
||||
.SetOperators(*a, *m)
|
||||
.Solve();
|
||||
|
||||
Eigen::VectorXd eigenvalues = spectra.GetEigenvalues(nev);
|
||||
|
||||
// 7. Define a grid function to represent each of the eigenmodes returned by the solver.
|
||||
|
||||
GridFunction x(fespace);
|
||||
|
||||
// 8. Save the refined mesh and the modes in parallel.
|
||||
// This output can be viewed later using GLVis: "glvis -np <np> -m mesh -g mode"
|
||||
{
|
||||
ostringstream mesh_name, mode_name;
|
||||
mesh_name << "ex11.mesh";
|
||||
|
||||
ofstream mesh_ofs(mesh_name.str().c_str());
|
||||
mesh_ofs.precision(8);
|
||||
mesh->Print(mesh_ofs);
|
||||
|
||||
for (int i = 0; i < nev; i++) {
|
||||
// conver Eigen Vector to MFEM Vector
|
||||
Vector eigenvector = VectorConverter<double>::from(spectra.GetEigenvector(i));
|
||||
|
||||
// convert eigenvector from Vector to GridFunction
|
||||
x = eigenvector;
|
||||
|
||||
mode_name << "mode_" << setfill('0') << setw(2) << i;
|
||||
|
||||
ofstream mode_ofs(mode_name.str().c_str());
|
||||
mode_ofs.precision(8);
|
||||
x.Save(mode_ofs);
|
||||
mode_name.str("");
|
||||
}
|
||||
}
|
||||
|
||||
// 10. Send the solution by socket to a GLVis server.
|
||||
if (visualization)
|
||||
{
|
||||
char vishost[] = "localhost";
|
||||
int visport = 19916;
|
||||
socketstream mode_sock(vishost, visport);
|
||||
mode_sock.precision(8);
|
||||
|
||||
for (int i=0; i<nev; i++)
|
||||
{
|
||||
cout << "Eigenmode " << i+1 << '/' << nev
|
||||
<< ", Lambda = " << eigenvalues[i] << endl;
|
||||
|
||||
// convert eigenvector from HypreParVector to ParGridFunction
|
||||
Vector eigenvector = VectorConverter<double>::from(spectra.GetEigenvector(i));
|
||||
x = eigenvector;
|
||||
|
||||
mode_sock << "solution\n" << *mesh << x << flush
|
||||
<< "window_title 'Eigenmode " << i+1 << '/' << nev
|
||||
<< ", Lambda = " << eigenvalues[i] << "'" << endl;
|
||||
|
||||
char c;
|
||||
cout << "press (q)uit or (c)ontinue --> " << flush;
|
||||
cin >> c;
|
||||
|
||||
if (c != 'c')
|
||||
{
|
||||
break;
|
||||
}
|
||||
}
|
||||
mode_sock.close();
|
||||
}
|
||||
|
||||
// 10. Free the used memory.
|
||||
delete m;
|
||||
delete a;
|
||||
|
||||
delete fespace;
|
||||
if (order > 0)
|
||||
{
|
||||
delete fec;
|
||||
}
|
||||
delete mesh;
|
||||
|
||||
return 0;
|
||||
}
|
||||
@@ -1,67 +0,0 @@
|
||||
# Copyright (c) 2010-2021, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
# This file is part of the MFEM library. For more information and source code
|
||||
# availability visit https://mfem.org.
|
||||
#
|
||||
# MFEM is free software; you can redistribute it and/or modify it under the
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
# Use the MFEM build directory
|
||||
MFEM_DIR ?= ../..
|
||||
MFEM_BUILD_DIR ?= ../..
|
||||
SRC = $(if $(MFEM_DIR:../..=),$(MFEM_DIR)/examples/spectra/,)
|
||||
CONFIG_MK = $(MFEM_BUILD_DIR)/config/config.mk
|
||||
# Use the MFEM install directory
|
||||
# MFEM_INSTALL_DIR = ../../mfem
|
||||
# CONFIG_MK = $(MFEM_INSTALL_DIR)/share/mfem/config.mk
|
||||
|
||||
MFEM_LIB_FILE = mfem_is_not_built
|
||||
-include $(CONFIG_MK)
|
||||
|
||||
SEQ_EXAMPLES = ex11
|
||||
PAR_EXAMPLES =
|
||||
ifeq ($(MFEM_USE_MPI),NO)
|
||||
EXAMPLES = $(SEQ_EXAMPLES)
|
||||
else
|
||||
EXAMPLES = $(PAR_EXAMPLES)
|
||||
endif
|
||||
RC_FILES = $(patsubst $(SRC)%,%,$(wildcard $(SRC)rc_*))
|
||||
|
||||
.SUFFIXES:
|
||||
.SUFFIXES: .o .cpp .mk
|
||||
.PHONY: all clean clean-build clean-exec
|
||||
|
||||
# Remove built-in rule
|
||||
%: %.cpp
|
||||
|
||||
# Replace the default implicit rule for *.cpp files
|
||||
%: $(SRC)%.cpp $(MFEM_LIB_FILE) $(CONFIG_MK)
|
||||
$(MFEM_CXX) $(MFEM_FLAGS) $< -o $@ $(MFEM_LIBS)
|
||||
|
||||
all: $(EXAMPLES)
|
||||
|
||||
# Examples depend on their corresponding rc_* files:
|
||||
make-rc-rule = $(1): | $(filter rc_$(1)%,$(RC_FILES))
|
||||
$(foreach ex,$(EXAMPLES),$(eval $(call make-rc-rule,$(ex))))
|
||||
|
||||
# Rules to copy the rc_* files when building out-of-source:
|
||||
ifneq ($(SRC),)
|
||||
$(RC_FILES): %: $(SRC)%
|
||||
cp -pf $(<) .
|
||||
endif
|
||||
|
||||
# Generate an error message if the MFEM library is not built and exit
|
||||
$(MFEM_LIB_FILE):
|
||||
$(error The MFEM library is not built)
|
||||
|
||||
clean: clean-build clean-exec
|
||||
|
||||
clean-build:
|
||||
rm -f *.o *~ $(SEQ_EXAMPLES) $(PAR_EXAMPLES)
|
||||
rm -rf *.dSYM *.TVD.*breakpoints
|
||||
|
||||
clean-exec:
|
||||
@rm -rf *.mesh mode_*
|
||||
@@ -17,14 +17,14 @@ namespace mfem
|
||||
{
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EAConvectionAssemble1D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EAConvectionAssemble1D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -69,14 +69,14 @@ static void EAConvectionAssemble1D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EAConvectionAssemble2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EAConvectionAssemble2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -146,14 +146,14 @@ static void EAConvectionAssemble2D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EAConvectionAssemble3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EAConvectionAssemble3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
@@ -21,13 +21,13 @@ namespace mfem
|
||||
// PA Convection Integrator
|
||||
|
||||
// PA Convection Assemble 2D kernel
|
||||
static void PAConvectionSetup2D(const int NQ,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &vel,
|
||||
const double alpha,
|
||||
Vector &op)
|
||||
void PAConvectionSetup2D(const int NQ,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &vel,
|
||||
const double alpha,
|
||||
Vector &op)
|
||||
{
|
||||
constexpr int DIM = 2;
|
||||
|
||||
@@ -60,13 +60,13 @@ static void PAConvectionSetup2D(const int NQ,
|
||||
}
|
||||
|
||||
// PA Convection Assemble 3D kernel
|
||||
static void PAConvectionSetup3D(const int NQ,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &vel,
|
||||
const double alpha,
|
||||
Vector &op)
|
||||
void PAConvectionSetup3D(const int NQ,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &vel,
|
||||
const double alpha,
|
||||
Vector &op)
|
||||
{
|
||||
constexpr int DIM = 3;
|
||||
constexpr int SDIM = DIM;
|
||||
@@ -135,7 +135,7 @@ static void PAConvectionSetup(const int dim,
|
||||
}
|
||||
|
||||
// PA Convection Apply 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
void PAConvectionApply2D(const int ne,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
@@ -254,7 +254,7 @@ void PAConvectionApply2D(const int ne,
|
||||
}
|
||||
|
||||
// Optimized PA Convection Apply 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_NBZ = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_NBZ = 0>
|
||||
void SmemPAConvectionApply2D(const int ne,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
@@ -382,7 +382,7 @@ void SmemPAConvectionApply2D(const int ne,
|
||||
}
|
||||
|
||||
// PA Convection Apply 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
void PAConvectionApply3D(const int ne,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
@@ -563,7 +563,7 @@ void PAConvectionApply3D(const int ne,
|
||||
}
|
||||
|
||||
// Optimized PA Convection Apply 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
void SmemPAConvectionApply3D(const int ne,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
|
||||
@@ -16,12 +16,12 @@
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
static void EADGTraceAssemble1DInt(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_int,
|
||||
Vector &eadata_ext,
|
||||
const bool add)
|
||||
void EADGTraceAssemble1DInt(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_int,
|
||||
Vector &eadata_ext,
|
||||
const bool add)
|
||||
{
|
||||
auto D = Reshape(padata.Read(), 2, 2, NF);
|
||||
auto A_int = Reshape(eadata_int.ReadWrite(), 2, NF);
|
||||
@@ -50,11 +50,11 @@ static void EADGTraceAssemble1DInt(const int NF,
|
||||
});
|
||||
}
|
||||
|
||||
static void EADGTraceAssemble1DBdr(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_bdr,
|
||||
const bool add)
|
||||
void EADGTraceAssemble1DBdr(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_bdr,
|
||||
const bool add)
|
||||
{
|
||||
auto D = Reshape(padata.Read(), 2, 2, NF);
|
||||
auto A_bdr = Reshape(eadata_bdr.ReadWrite(), NF);
|
||||
@@ -72,14 +72,14 @@ static void EADGTraceAssemble1DBdr(const int NF,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EADGTraceAssemble2DInt(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_int,
|
||||
Vector &eadata_ext,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EADGTraceAssemble2DInt(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_int,
|
||||
Vector &eadata_ext,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -128,13 +128,13 @@ static void EADGTraceAssemble2DInt(const int NF,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EADGTraceAssemble2DBdr(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_bdr,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EADGTraceAssemble2DBdr(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_bdr,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -170,14 +170,14 @@ static void EADGTraceAssemble2DBdr(const int NF,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EADGTraceAssemble3DInt(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_int,
|
||||
Vector &eadata_ext,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EADGTraceAssemble3DInt(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_int,
|
||||
Vector &eadata_ext,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -268,13 +268,13 @@ static void EADGTraceAssemble3DInt(const int NF,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EADGTraceAssemble3DBdr(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_bdr,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EADGTraceAssemble3DBdr(const int NF,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata_bdr,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
@@ -19,16 +19,16 @@ using namespace std;
|
||||
namespace mfem
|
||||
{
|
||||
// PA DG Trace Integrator
|
||||
static void PADGTraceSetup2D(const int Q1D,
|
||||
const int NF,
|
||||
const Array<double> &w,
|
||||
const Vector &det,
|
||||
const Vector &nor,
|
||||
const Vector &rho,
|
||||
const Vector &vel,
|
||||
const double alpha,
|
||||
const double beta,
|
||||
Vector &op)
|
||||
void PADGTraceSetup2D(const int Q1D,
|
||||
const int NF,
|
||||
const Array<double> &w,
|
||||
const Vector &det,
|
||||
const Vector &nor,
|
||||
const Vector &rho,
|
||||
const Vector &vel,
|
||||
const double alpha,
|
||||
const double beta,
|
||||
Vector &op)
|
||||
{
|
||||
const int VDIM = 2;
|
||||
|
||||
@@ -61,16 +61,16 @@ static void PADGTraceSetup2D(const int Q1D,
|
||||
});
|
||||
}
|
||||
|
||||
static void PADGTraceSetup3D(const int Q1D,
|
||||
const int NF,
|
||||
const Array<double> &w,
|
||||
const Vector &det,
|
||||
const Vector &nor,
|
||||
const Vector &rho,
|
||||
const Vector &vel,
|
||||
const double alpha,
|
||||
const double beta,
|
||||
Vector &op)
|
||||
void PADGTraceSetup3D(const int Q1D,
|
||||
const int NF,
|
||||
const Array<double> &w,
|
||||
const Vector &det,
|
||||
const Vector &nor,
|
||||
const Vector &rho,
|
||||
const Vector &vel,
|
||||
const double alpha,
|
||||
const double beta,
|
||||
Vector &op)
|
||||
{
|
||||
const int VDIM = 3;
|
||||
|
||||
@@ -301,7 +301,7 @@ void DGTraceIntegrator::AssemblePABoundaryFaces(const FiniteElementSpace& fes)
|
||||
}
|
||||
|
||||
// PA DGTrace Apply 2D kernel for Gauss-Lobatto/Bernstein
|
||||
template<int T_D1D = 0, int T_Q1D = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
void PADGTraceApply2D(const int NF,
|
||||
const Array<double> &b,
|
||||
const Array<double> &bt,
|
||||
@@ -392,7 +392,7 @@ void PADGTraceApply2D(const int NF,
|
||||
}
|
||||
|
||||
// PA DGTrace Apply 3D kernel for Gauss-Lobatto/Bernstein
|
||||
template<int T_D1D = 0, int T_Q1D = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
void PADGTraceApply3D(const int NF,
|
||||
const Array<double> &b,
|
||||
const Array<double> &bt,
|
||||
@@ -537,7 +537,7 @@ void PADGTraceApply3D(const int NF,
|
||||
}
|
||||
|
||||
// Optimized PA DGTrace Apply 3D kernel for Gauss-Lobatto/Bernstein
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_NBZ = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_NBZ = 0>
|
||||
void SmemPADGTraceApply3D(const int NF,
|
||||
const Array<double> &b,
|
||||
const Array<double> &bt,
|
||||
@@ -701,7 +701,7 @@ static void PADGTraceApply(const int dim,
|
||||
}
|
||||
|
||||
// PA DGTrace Apply 2D kernel for Gauss-Lobatto/Bernstein
|
||||
template<int T_D1D = 0, int T_Q1D = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
void PADGTraceApplyTranspose2D(const int NF,
|
||||
const Array<double> &b,
|
||||
const Array<double> &bt,
|
||||
@@ -797,7 +797,7 @@ void PADGTraceApplyTranspose2D(const int NF,
|
||||
}
|
||||
|
||||
// PA DGTrace Apply Transpose 3D kernel for Gauss-Lobatto/Bernstein
|
||||
template<int T_D1D = 0, int T_Q1D = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
void PADGTraceApplyTranspose3D(const int NF,
|
||||
const Array<double> &b,
|
||||
const Array<double> &bt,
|
||||
@@ -953,7 +953,7 @@ void PADGTraceApplyTranspose3D(const int NF,
|
||||
}
|
||||
|
||||
// Optimized PA DGTrace Apply Transpose 3D kernel for Gauss-Lobatto/Bernstein
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_NBZ = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_NBZ = 0>
|
||||
void SmemPADGTraceApplyTranspose3D(const int NF,
|
||||
const Array<double> &b,
|
||||
const Array<double> &bt,
|
||||
|
||||
@@ -17,14 +17,14 @@ namespace mfem
|
||||
{
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EADiffusionAssemble1D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EADiffusionAssemble1D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -68,14 +68,14 @@ static void EADiffusionAssemble1D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EADiffusionAssemble2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EADiffusionAssemble2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -145,14 +145,14 @@ static void EADiffusionAssemble2D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EADiffusionAssemble3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EADiffusionAssemble3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
@@ -496,14 +496,14 @@ void DiffusionIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PADiffusionDiagonal2D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PADiffusionDiagonal2D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -562,14 +562,14 @@ static void PADiffusionDiagonal2D(const int NE,
|
||||
|
||||
// Shared memory PA Diffusion Diagonal 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_NBZ = 0>
|
||||
static void SmemPADiffusionDiagonal2D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Vector &d_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPADiffusionDiagonal2D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Vector &d_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -656,14 +656,14 @@ static void SmemPADiffusionDiagonal2D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PADiffusionDiagonal3D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PADiffusionDiagonal3D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
constexpr int DIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
@@ -757,14 +757,14 @@ static void PADiffusionDiagonal3D(const int NE,
|
||||
|
||||
// Shared memory PA Diffusion Diagonal 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void SmemPADiffusionDiagonal3D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Vector &d_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPADiffusionDiagonal3D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Vector &d_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
constexpr int DIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
@@ -1034,17 +1034,17 @@ static void OccaPADiffusionApply3D(const int D1D,
|
||||
|
||||
// PA Diffusion Apply 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PADiffusionApply2D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Array<double> &bt_,
|
||||
const Array<double> >_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PADiffusionApply2D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Array<double> &bt_,
|
||||
const Array<double> >_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -1156,15 +1156,15 @@ static void PADiffusionApply2D(const int NE,
|
||||
|
||||
// Shared memory PA Diffusion Apply 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_NBZ = 0>
|
||||
static void SmemPADiffusionApply2D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPADiffusionApply2D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -1314,16 +1314,16 @@ static void SmemPADiffusionApply2D(const int NE,
|
||||
|
||||
// PA Diffusion Apply 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PADiffusionApply3D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Array<double> >,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
int d1d = 0, int q1d = 0)
|
||||
void PADiffusionApply3D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Array<double> >,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
int d1d = 0, int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -1533,15 +1533,15 @@ static MFEM_HOST_DEVICE inline double sign(const int q, const int d)
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void SmemPADiffusionApply3D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPADiffusionApply3D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
@@ -21,12 +21,12 @@ namespace mfem
|
||||
// PA Divergence Integrator
|
||||
|
||||
// PA Divergence Assemble 2D kernel
|
||||
static void PADivergenceSetup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const double COEFF,
|
||||
Vector &op)
|
||||
void PADivergenceSetup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const double COEFF,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -51,12 +51,12 @@ static void PADivergenceSetup2D(const int Q1D,
|
||||
}
|
||||
|
||||
// PA Divergence Assemble 3D kernel
|
||||
static void PADivergenceSetup3D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const double COEFF,
|
||||
Vector &op)
|
||||
void PADivergenceSetup3D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const double COEFF,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -160,16 +160,16 @@ void VectorDivergenceIntegrator::AssemblePA(const FiniteElementSpace &trial_fes,
|
||||
|
||||
// PA Divergence Apply 2D kernel
|
||||
template<const int T_TR_D1D = 0, const int T_TE_D1D = 0, const int T_Q1D = 0>
|
||||
static void PADivergenceApply2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PADivergenceApply2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
@@ -281,16 +281,16 @@ static void PADivergenceApply2D(const int NE,
|
||||
// Shared memory PA Divergence Apply 2D kernel
|
||||
template<const int T_TR_D1D = 0, const int T_TE_D1D = 0, const int T_Q1D = 0,
|
||||
const int T_NBZ = 0>
|
||||
static void SmemPADivergenceApply2D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPADivergenceApply2D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
// TODO
|
||||
MFEM_ASSERT(false, "SHARED MEM NOT PROGRAMMED YET");
|
||||
@@ -298,16 +298,16 @@ static void SmemPADivergenceApply2D(const int NE,
|
||||
|
||||
// PA Divergence Apply 2D kernel transpose
|
||||
template<const int T_TR_D1D = 0, const int T_TE_D1D = 0, const int T_Q1D = 0>
|
||||
static void PADivergenceApplyTranspose2D(const int NE,
|
||||
const Array<double> &bt,
|
||||
const Array<double> >,
|
||||
const Array<double> &b,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PADivergenceApplyTranspose2D(const int NE,
|
||||
const Array<double> &bt,
|
||||
const Array<double> >,
|
||||
const Array<double> &b,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
@@ -414,16 +414,16 @@ static void PADivergenceApplyTranspose2D(const int NE,
|
||||
|
||||
// PA Vector Divergence Apply 3D kernel
|
||||
template<const int T_TR_D1D = 0, const int T_TE_D1D = 0, const int T_Q1D = 0>
|
||||
static void PADivergenceApply3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
int tr_d1d = 0,
|
||||
int te_d1d = 0,
|
||||
int q1d = 0)
|
||||
void PADivergenceApply3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
int tr_d1d = 0,
|
||||
int te_d1d = 0,
|
||||
int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
@@ -597,16 +597,16 @@ static void PADivergenceApply3D(const int NE,
|
||||
|
||||
// PA Vector Divergence Apply 3D kernel
|
||||
template<const int T_TR_D1D = 0, const int T_TE_D1D = 0, const int T_Q1D = 0>
|
||||
static void PADivergenceApplyTranspose3D(const int NE,
|
||||
const Array<double> &bt,
|
||||
const Array<double> >,
|
||||
const Array<double> &b,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
int tr_d1d = 0,
|
||||
int te_d1d = 0,
|
||||
int q1d = 0)
|
||||
void PADivergenceApplyTranspose3D(const int NE,
|
||||
const Array<double> &bt,
|
||||
const Array<double> >,
|
||||
const Array<double> &b,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
int tr_d1d = 0,
|
||||
int te_d1d = 0,
|
||||
int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
@@ -775,16 +775,16 @@ static void PADivergenceApplyTranspose3D(const int NE,
|
||||
|
||||
// Shared memory PA Vector Divergence Apply 3D kernel
|
||||
template<const int T_TR_D1D = 0, const int T_TE_D1D = 0, const int T_Q1D = 0>
|
||||
static void SmemPADivergenceApply3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPADivergenceApply3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
|
||||
+42
-42
@@ -70,12 +70,12 @@ namespace mfem
|
||||
the \b MFEM_SHARED keyword for local arrays. */
|
||||
|
||||
// PA Gradient Assemble 2D kernel
|
||||
static void PAGradientSetup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &c,
|
||||
Vector &op)
|
||||
void PAGradientSetup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &c,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -105,12 +105,12 @@ static void PAGradientSetup2D(const int Q1D,
|
||||
}
|
||||
|
||||
// PA Gradient Assemble 3D kernel
|
||||
static void PAGradientSetup3D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &c,
|
||||
Vector &op)
|
||||
void PAGradientSetup3D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &c,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -254,16 +254,16 @@ void GradientIntegrator::AssemblePA(const FiniteElementSpace &trial_fes,
|
||||
|
||||
// PA Gradient Apply 2D kernel
|
||||
template<int T_TR_D1D = 0, int T_TE_D1D = 0, int T_Q1D = 0>
|
||||
static void PAGradientApply2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAGradientApply2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
@@ -384,16 +384,16 @@ static void PAGradientApplyTranspose2D(const int NE,
|
||||
|
||||
// PA Gradient Apply 3D kernel
|
||||
template<const int T_TR_D1D = 0, const int T_TE_D1D = 0, const int T_Q1D = 0>
|
||||
static void PAGradientApply3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
int tr_d1d = 0,
|
||||
int te_d1d = 0,
|
||||
int q1d = 0)
|
||||
void PAGradientApply3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
int tr_d1d = 0,
|
||||
int te_d1d = 0,
|
||||
int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
@@ -579,16 +579,16 @@ static void PAGradientApplyTranspose3D(const int NE,
|
||||
|
||||
// Shared memory PA Gradient Apply 3D kernel
|
||||
template<const int T_TR_D1D = 0, const int T_TE_D1D = 0, const int T_Q1D = 0>
|
||||
static void SmemPAGradientApply3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPAGradientApply3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
|
||||
+194
-194
@@ -791,12 +791,12 @@ void SmemPAHcurlMassApply3D(const int D1D,
|
||||
}
|
||||
|
||||
// PA H(curl) curl-curl assemble 2D kernel
|
||||
static void PACurlCurlSetup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
Vector &coeff,
|
||||
Vector &op)
|
||||
void PACurlCurlSetup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
Vector &coeff,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -818,13 +818,13 @@ static void PACurlCurlSetup2D(const int Q1D,
|
||||
}
|
||||
|
||||
// PA H(curl) curl-curl assemble 3D kernel
|
||||
static void PACurlCurlSetup3D(const int Q1D,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
Vector &coeff,
|
||||
Vector &op)
|
||||
void PACurlCurlSetup3D(const int Q1D,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
Vector &coeff,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D*Q1D;
|
||||
const bool symmetric = (coeffDim != 9);
|
||||
@@ -1045,16 +1045,16 @@ void CurlCurlIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
}
|
||||
}
|
||||
|
||||
static void PACurlCurlApply2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &gc,
|
||||
const Array<double> &gct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
void PACurlCurlApply2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &gc,
|
||||
const Array<double> &gct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
constexpr static int VDIM = 2;
|
||||
constexpr static int MAX_D1D = HCURL_MAX_D1D;
|
||||
@@ -1166,19 +1166,19 @@ static void PACurlCurlApply2D(const int D1D,
|
||||
}
|
||||
|
||||
template<int MAX_D1D = HCURL_MAX_D1D, int MAX_Q1D = HCURL_MAX_Q1D>
|
||||
static void PACurlCurlApply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const bool symmetric,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &bct,
|
||||
const Array<double> &gc,
|
||||
const Array<double> &gct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
void PACurlCurlApply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const bool symmetric,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &bct,
|
||||
const Array<double> &gc,
|
||||
const Array<double> &gct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= MAX_D1D, "Error: D1D > MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= MAX_Q1D, "Error: Q1D > MAX_Q1D");
|
||||
@@ -1677,19 +1677,19 @@ static void PACurlCurlApply3D(const int D1D,
|
||||
}
|
||||
|
||||
template<int MAX_D1D = HCURL_MAX_D1D, int MAX_Q1D = HCURL_MAX_Q1D>
|
||||
static void SmemPACurlCurlApply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const bool symmetric,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &bct,
|
||||
const Array<double> &gc,
|
||||
const Array<double> &gct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
void SmemPACurlCurlApply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const bool symmetric,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &bct,
|
||||
const Array<double> &gc,
|
||||
const Array<double> &gct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= MAX_D1D, "Error: D1D > MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= MAX_Q1D, "Error: Q1D > MAX_Q1D");
|
||||
@@ -2032,13 +2032,13 @@ void CurlCurlIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
}
|
||||
}
|
||||
|
||||
static void PACurlCurlAssembleDiagonal2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
Vector &diag)
|
||||
void PACurlCurlAssembleDiagonal2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
Vector &diag)
|
||||
{
|
||||
constexpr static int VDIM = 2;
|
||||
constexpr static int MAX_Q1D = HCURL_MAX_Q1D;
|
||||
@@ -2087,16 +2087,16 @@ static void PACurlCurlAssembleDiagonal2D(const int D1D,
|
||||
}
|
||||
|
||||
template<int MAX_D1D = HCURL_MAX_D1D, int MAX_Q1D = HCURL_MAX_Q1D>
|
||||
static void PACurlCurlAssembleDiagonal3D(const int D1D,
|
||||
const int Q1D,
|
||||
const bool symmetric,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &go,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
Vector &diag)
|
||||
void PACurlCurlAssembleDiagonal3D(const int D1D,
|
||||
const int Q1D,
|
||||
const bool symmetric,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &go,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
Vector &diag)
|
||||
{
|
||||
constexpr static int VDIM = 3;
|
||||
MFEM_VERIFY(D1D <= MAX_D1D, "Error: D1D > MAX_D1D");
|
||||
@@ -2273,16 +2273,16 @@ static void PACurlCurlAssembleDiagonal3D(const int D1D,
|
||||
}
|
||||
|
||||
template<int MAX_D1D = HCURL_MAX_D1D, int MAX_Q1D = HCURL_MAX_Q1D>
|
||||
static void SmemPACurlCurlAssembleDiagonal3D(const int D1D,
|
||||
const int Q1D,
|
||||
const bool symmetric,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &go,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
Vector &diag)
|
||||
void SmemPACurlCurlAssembleDiagonal3D(const int D1D,
|
||||
const int Q1D,
|
||||
const bool symmetric,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &go,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
Vector &diag)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= MAX_D1D, "Error: D1D > MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= MAX_Q1D, "Error: Q1D > MAX_Q1D");
|
||||
@@ -2955,18 +2955,18 @@ void MixedVectorCurlIntegrator::AssemblePA(const FiniteElementSpace &trial_fes,
|
||||
// Apply to x corresponding to DOF's in H(curl) (trial), whose curl is
|
||||
// integrated against H(curl) test functions corresponding to y.
|
||||
template<int MAX_D1D = HCURL_MAX_D1D, int MAX_Q1D = HCURL_MAX_Q1D>
|
||||
static void PAHcurlL2Apply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &bct,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
void PAHcurlL2Apply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &bct,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= MAX_D1D, "Error: D1D > MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= MAX_Q1D, "Error: Q1D > MAX_Q1D");
|
||||
@@ -3297,16 +3297,16 @@ static void PAHcurlL2Apply3D(const int D1D,
|
||||
// Apply to x corresponding to DOF's in H(curl) (trial), whose curl is
|
||||
// integrated against H(curl) test functions corresponding to y.
|
||||
template<int MAX_D1D = HCURL_MAX_D1D, int MAX_Q1D = HCURL_MAX_Q1D>
|
||||
static void SmemPAHcurlL2Apply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
void SmemPAHcurlL2Apply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= MAX_D1D, "Error: D1D > MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= MAX_Q1D, "Error: Q1D > MAX_Q1D");
|
||||
@@ -3585,18 +3585,18 @@ static void SmemPAHcurlL2Apply3D(const int D1D,
|
||||
// Apply to x corresponding to DOF's in H(curl) (trial), whose curl is
|
||||
// integrated against H(div) test functions corresponding to y.
|
||||
template<int MAX_D1D = HCURL_MAX_D1D, int MAX_Q1D = HCURL_MAX_Q1D>
|
||||
static void PAHcurlHdivApply3D(const int D1D,
|
||||
const int D1Dtest,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &bct,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
void PAHcurlHdivApply3D(const int D1D,
|
||||
const int D1Dtest,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &bct,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= MAX_D1D, "Error: D1D > MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= MAX_Q1D, "Error: Q1D > MAX_Q1D");
|
||||
@@ -4071,18 +4071,18 @@ void MixedVectorWeakCurlIntegrator::AssemblePA(const FiniteElementSpace
|
||||
// Apply to x corresponding to DOF's in H(curl) (trial), integrated against curl
|
||||
// of H(curl) test functions corresponding to y.
|
||||
template<int MAX_D1D = HCURL_MAX_D1D, int MAX_Q1D = HCURL_MAX_Q1D>
|
||||
static void PAHcurlL2Apply3DTranspose(const int D1D,
|
||||
const int Q1D,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &bct,
|
||||
const Array<double> &gct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
void PAHcurlL2Apply3DTranspose(const int D1D,
|
||||
const int Q1D,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &bot,
|
||||
const Array<double> &bct,
|
||||
const Array<double> &gct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
// See PAHcurlL2Apply3D for comments.
|
||||
|
||||
@@ -4413,16 +4413,16 @@ static void PAHcurlL2Apply3DTranspose(const int D1D,
|
||||
}
|
||||
|
||||
template<int MAX_D1D = HCURL_MAX_D1D, int MAX_Q1D = HCURL_MAX_Q1D>
|
||||
static void SmemPAHcurlL2Apply3DTranspose(const int D1D,
|
||||
const int Q1D,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
void SmemPAHcurlL2Apply3DTranspose(const int D1D,
|
||||
const int Q1D,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
const Array<double> &bo,
|
||||
const Array<double> &bc,
|
||||
const Array<double> &gc,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= MAX_D1D, "Error: D1D > MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= MAX_Q1D, "Error: Q1D > MAX_Q1D");
|
||||
@@ -4675,13 +4675,13 @@ void MixedVectorWeakCurlIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
// Apply to x corresponding to DOFs in H^1 (domain) the (topological) gradient
|
||||
// to get a dof in H(curl) (range). You can think of the range as the "test" space
|
||||
// and the domain as the "trial" space, but there's no integration.
|
||||
static void PAHcurlApplyGradient2D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &G_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHcurlApplyGradient2D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &G_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto B = Reshape(B_.Read(), c_dofs1D, c_dofs1D);
|
||||
auto G = Reshape(G_.Read(), o_dofs1D, c_dofs1D);
|
||||
@@ -4753,12 +4753,12 @@ static void PAHcurlApplyGradient2D(const int c_dofs1D,
|
||||
}
|
||||
|
||||
// Specialization of PAHcurlApplyGradient2D to the case where B is identity
|
||||
static void PAHcurlApplyGradient2DBId(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &G_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHcurlApplyGradient2DBId(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &G_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto G = Reshape(G_.Read(), o_dofs1D, c_dofs1D);
|
||||
|
||||
@@ -4822,7 +4822,7 @@ static void PAHcurlApplyGradient2DBId(const int c_dofs1D,
|
||||
});
|
||||
}
|
||||
|
||||
static void PAHcurlApplyGradientTranspose2D(
|
||||
void PAHcurlApplyGradientTranspose2D(
|
||||
const int c_dofs1D, const int o_dofs1D, const int NE,
|
||||
const Array<double> &B_, const Array<double> &G_,
|
||||
const Vector &x_, Vector &y_)
|
||||
@@ -4898,7 +4898,7 @@ static void PAHcurlApplyGradientTranspose2D(
|
||||
|
||||
// Specialization of PAHcurlApplyGradientTranspose2D to the case where
|
||||
// B is identity
|
||||
static void PAHcurlApplyGradientTranspose2DBId(
|
||||
void PAHcurlApplyGradientTranspose2DBId(
|
||||
const int c_dofs1D, const int o_dofs1D, const int NE,
|
||||
const Array<double> &G_,
|
||||
const Vector &x_, Vector &y_)
|
||||
@@ -4965,13 +4965,13 @@ static void PAHcurlApplyGradientTranspose2DBId(
|
||||
});
|
||||
}
|
||||
|
||||
static void PAHcurlApplyGradient3D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &G_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHcurlApplyGradient3D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &G_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto B = Reshape(B_.Read(), c_dofs1D, c_dofs1D);
|
||||
auto G = Reshape(G_.Read(), o_dofs1D, c_dofs1D);
|
||||
@@ -5154,12 +5154,12 @@ static void PAHcurlApplyGradient3D(const int c_dofs1D,
|
||||
}
|
||||
|
||||
// Specialization of PAHcurlApplyGradient3D to the case where
|
||||
static void PAHcurlApplyGradient3DBId(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &G_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHcurlApplyGradient3DBId(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &G_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto G = Reshape(G_.Read(), o_dofs1D, c_dofs1D);
|
||||
|
||||
@@ -5322,7 +5322,7 @@ static void PAHcurlApplyGradient3DBId(const int c_dofs1D,
|
||||
});
|
||||
}
|
||||
|
||||
static void PAHcurlApplyGradientTranspose3D(
|
||||
void PAHcurlApplyGradientTranspose3D(
|
||||
const int c_dofs1D, const int o_dofs1D, const int NE,
|
||||
const Array<double> &B_, const Array<double> &G_,
|
||||
const Vector &x_, Vector &y_)
|
||||
@@ -5507,7 +5507,7 @@ static void PAHcurlApplyGradientTranspose3D(
|
||||
}
|
||||
|
||||
// Specialization of PAHcurlApplyGradientTranspose3D to the case where
|
||||
static void PAHcurlApplyGradientTranspose3DBId(
|
||||
void PAHcurlApplyGradientTranspose3DBId(
|
||||
const int c_dofs1D, const int o_dofs1D, const int NE,
|
||||
const Array<double> &G_,
|
||||
const Vector &x_, Vector &y_)
|
||||
@@ -5789,14 +5789,14 @@ void GradientInterpolator::AddMultTransposePA(const Vector &x, Vector &y) const
|
||||
}
|
||||
}
|
||||
|
||||
static void PAHcurlVecH1IdentityApply3D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &Bclosed,
|
||||
const Array<double> &Bopen,
|
||||
const Vector &pa_data,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHcurlVecH1IdentityApply3D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &Bclosed,
|
||||
const Array<double> &Bopen,
|
||||
const Vector &pa_data,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto Bc = Reshape(Bclosed.Read(), c_dofs1D, c_dofs1D);
|
||||
auto Bo = Reshape(Bopen.Read(), o_dofs1D, c_dofs1D);
|
||||
@@ -6002,14 +6002,14 @@ static void PAHcurlVecH1IdentityApply3D(const int c_dofs1D,
|
||||
});
|
||||
}
|
||||
|
||||
static void PAHcurlVecH1IdentityApplyTranspose3D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &Bclosed,
|
||||
const Array<double> &Bopen,
|
||||
const Vector &pa_data,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHcurlVecH1IdentityApplyTranspose3D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &Bclosed,
|
||||
const Array<double> &Bopen,
|
||||
const Vector &pa_data,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto Bc = Reshape(Bclosed.Read(), c_dofs1D, c_dofs1D);
|
||||
auto Bo = Reshape(Bopen.Read(), o_dofs1D, c_dofs1D);
|
||||
@@ -6228,14 +6228,14 @@ static void PAHcurlVecH1IdentityApplyTranspose3D(const int c_dofs1D,
|
||||
});
|
||||
}
|
||||
|
||||
static void PAHcurlVecH1IdentityApply2D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &Bclosed,
|
||||
const Array<double> &Bopen,
|
||||
const Vector &pa_data,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHcurlVecH1IdentityApply2D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &Bclosed,
|
||||
const Array<double> &Bopen,
|
||||
const Vector &pa_data,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto Bc = Reshape(Bclosed.Read(), c_dofs1D, c_dofs1D);
|
||||
auto Bo = Reshape(Bopen.Read(), o_dofs1D, c_dofs1D);
|
||||
@@ -6327,14 +6327,14 @@ static void PAHcurlVecH1IdentityApply2D(const int c_dofs1D,
|
||||
});
|
||||
}
|
||||
|
||||
static void PAHcurlVecH1IdentityApplyTranspose2D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &Bclosed,
|
||||
const Array<double> &Bopen,
|
||||
const Vector &pa_data,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHcurlVecH1IdentityApplyTranspose2D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<double> &Bclosed,
|
||||
const Array<double> &Bopen,
|
||||
const Vector &pa_data,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto Bc = Reshape(Bclosed.Read(), c_dofs1D, c_dofs1D);
|
||||
auto Bo = Reshape(Bopen.Read(), o_dofs1D, c_dofs1D);
|
||||
|
||||
+116
-116
@@ -539,12 +539,12 @@ void PAHdivMassApply3D(const int D1D,
|
||||
|
||||
// PA H(div) div-div assemble 2D kernel
|
||||
// NOTE: this is identical to PACurlCurlSetup3D
|
||||
static void PADivDivSetup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
Vector &coeff_,
|
||||
Vector &op)
|
||||
void PADivDivSetup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
Vector &coeff_,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -565,12 +565,12 @@ static void PADivDivSetup2D(const int Q1D,
|
||||
});
|
||||
}
|
||||
|
||||
static void PADivDivSetup3D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
Vector &coeff_,
|
||||
Vector &op)
|
||||
void PADivDivSetup3D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
Vector &coeff_,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -599,16 +599,16 @@ static void PADivDivSetup3D(const int Q1D,
|
||||
});
|
||||
}
|
||||
|
||||
static void PADivDivApply2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Array<double> &Bot_,
|
||||
const Array<double> &Gct_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PADivDivApply2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Array<double> &Bot_,
|
||||
const Array<double> &Gct_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
constexpr static int VDIM = 2;
|
||||
constexpr static int MAX_D1D = HDIV_MAX_D1D;
|
||||
@@ -718,16 +718,16 @@ static void PADivDivApply2D(const int D1D,
|
||||
}); // end of element loop
|
||||
}
|
||||
|
||||
static void PADivDivApply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Array<double> &Bot_,
|
||||
const Array<double> &Gct_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PADivDivApply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Array<double> &Bot_,
|
||||
const Array<double> &Gct_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= HDIV_MAX_D1D, "Error: D1D > HDIV_MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= HDIV_MAX_Q1D, "Error: Q1D > HDIV_MAX_Q1D");
|
||||
@@ -967,13 +967,13 @@ void DivDivIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
}
|
||||
}
|
||||
|
||||
static void PADivDivAssembleDiagonal2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Vector &op_,
|
||||
Vector &diag_)
|
||||
void PADivDivAssembleDiagonal2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Vector &op_,
|
||||
Vector &diag_)
|
||||
{
|
||||
constexpr static int VDIM = 2;
|
||||
constexpr static int MAX_Q1D = HDIV_MAX_Q1D;
|
||||
@@ -1023,13 +1023,13 @@ static void PADivDivAssembleDiagonal2D(const int D1D,
|
||||
});
|
||||
}
|
||||
|
||||
static void PADivDivAssembleDiagonal3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Vector &op_,
|
||||
Vector &diag_)
|
||||
void PADivDivAssembleDiagonal3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Vector &op_,
|
||||
Vector &diag_)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= HDIV_MAX_D1D, "Error: D1D > HDIV_MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= HDIV_MAX_Q1D, "Error: Q1D > HDIV_MAX_Q1D");
|
||||
@@ -1104,11 +1104,11 @@ void DivDivIntegrator::AssembleDiagonalPA(Vector& diag)
|
||||
}
|
||||
|
||||
// PA H(div)-L2 (div u, p) assemble 2D kernel
|
||||
static void PADivL2Setup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
Vector &coeff_,
|
||||
Vector &op)
|
||||
void PADivL2Setup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
Vector &coeff_,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -1123,11 +1123,11 @@ static void PADivL2Setup2D(const int Q1D,
|
||||
});
|
||||
}
|
||||
|
||||
static void PADivL2Setup3D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
Vector &coeff_,
|
||||
Vector &op)
|
||||
void PADivL2Setup3D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
Vector &coeff_,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -1225,16 +1225,16 @@ VectorFEDivergenceIntegrator::AssemblePA(const FiniteElementSpace &trial_fes,
|
||||
|
||||
// Apply to x corresponding to DOF's in H(div) (trial), whose divergence is
|
||||
// integrated against L_2 test functions corresponding to y.
|
||||
static void PAHdivL2Apply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Array<double> &L2Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHdivL2Apply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Array<double> &L2Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= HDIV_MAX_D1D, "Error: D1D > HDIV_MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= HDIV_MAX_Q1D, "Error: Q1D > HDIV_MAX_Q1D");
|
||||
@@ -1388,16 +1388,16 @@ static void PAHdivL2Apply3D(const int D1D,
|
||||
|
||||
// Apply to x corresponding to DOF's in H(div) (trial), whose divergence is
|
||||
// integrated against L_2 test functions corresponding to y.
|
||||
static void PAHdivL2Apply2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Array<double> &L2Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHdivL2Apply2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &Bo_,
|
||||
const Array<double> &Gc_,
|
||||
const Array<double> &L2Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
constexpr static int VDIM = 2;
|
||||
constexpr static int MAX_D1D = HDIV_MAX_D1D;
|
||||
@@ -1494,16 +1494,16 @@ static void PAHdivL2Apply2D(const int D1D,
|
||||
}); // end of element loop
|
||||
}
|
||||
|
||||
static void PAHdivL2ApplyTranspose3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &L2Bo_,
|
||||
const Array<double> &Gct_,
|
||||
const Array<double> &Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHdivL2ApplyTranspose3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &L2Bo_,
|
||||
const Array<double> &Gct_,
|
||||
const Array<double> &Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= HDIV_MAX_D1D, "Error: D1D > HDIV_MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= HDIV_MAX_Q1D, "Error: Q1D > HDIV_MAX_Q1D");
|
||||
@@ -1656,16 +1656,16 @@ static void PAHdivL2ApplyTranspose3D(const int D1D,
|
||||
}); // end of element loop
|
||||
}
|
||||
|
||||
static void PAHdivL2ApplyTranspose2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &L2Bo_,
|
||||
const Array<double> &Gct_,
|
||||
const Array<double> &Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHdivL2ApplyTranspose2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &L2Bo_,
|
||||
const Array<double> &Gct_,
|
||||
const Array<double> &Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
constexpr static int VDIM = 2;
|
||||
constexpr static int MAX_D1D = HDIV_MAX_D1D;
|
||||
@@ -1791,16 +1791,16 @@ void VectorFEDivergenceIntegrator::AddMultTransposePA(const Vector &x,
|
||||
}
|
||||
}
|
||||
|
||||
static void PAHdivL2AssembleDiagonal_ADAt_3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &L2Bo_,
|
||||
const Array<double> &Gct_,
|
||||
const Array<double> &Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &D_,
|
||||
Vector &diag_)
|
||||
void PAHdivL2AssembleDiagonal_ADAt_3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &L2Bo_,
|
||||
const Array<double> &Gct_,
|
||||
const Array<double> &Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &D_,
|
||||
Vector &diag_)
|
||||
{
|
||||
MFEM_VERIFY(D1D <= HDIV_MAX_D1D, "Error: D1D > HDIV_MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= HDIV_MAX_Q1D, "Error: Q1D > HDIV_MAX_Q1D");
|
||||
@@ -1916,16 +1916,16 @@ static void PAHdivL2AssembleDiagonal_ADAt_3D(const int D1D,
|
||||
}); // end of element loop
|
||||
}
|
||||
|
||||
static void PAHdivL2AssembleDiagonal_ADAt_2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &L2Bo_,
|
||||
const Array<double> &Gct_,
|
||||
const Array<double> &Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &D_,
|
||||
Vector &diag_)
|
||||
void PAHdivL2AssembleDiagonal_ADAt_2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int L2D1D,
|
||||
const int NE,
|
||||
const Array<double> &L2Bo_,
|
||||
const Array<double> &Gct_,
|
||||
const Array<double> &Bot_,
|
||||
const Vector &op_,
|
||||
const Vector &D_,
|
||||
Vector &diag_)
|
||||
{
|
||||
constexpr static int VDIM = 2;
|
||||
|
||||
|
||||
+21
-21
@@ -17,13 +17,13 @@ namespace mfem
|
||||
{
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EAMassAssemble1D(const int NE,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EAMassAssemble1D(const int NE,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -67,13 +67,13 @@ static void EAMassAssemble1D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EAMassAssemble2D(const int NE,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EAMassAssemble2D(const int NE,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -139,13 +139,13 @@ static void EAMassAssemble2D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void EAMassAssemble3D(const int NE,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void EAMassAssemble3D(const int NE,
|
||||
const Array<double> &basis,
|
||||
const Vector &padata,
|
||||
Vector &eadata,
|
||||
const bool add,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
+56
-56
@@ -155,12 +155,12 @@ void MassIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAMassAssembleDiagonal2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAMassAssembleDiagonal2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -201,12 +201,12 @@ static void PAMassAssembleDiagonal2D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_NBZ = 0>
|
||||
static void SmemPAMassAssembleDiagonal2D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Vector &d_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPAMassAssembleDiagonal2D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Vector &d_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -267,12 +267,12 @@ static void SmemPAMassAssembleDiagonal2D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAMassAssembleDiagonal3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAMassAssembleDiagonal3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -336,12 +336,12 @@ static void PAMassAssembleDiagonal3D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void SmemPAMassAssembleDiagonal3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Vector &d_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPAMassAssembleDiagonal3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Vector &d_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -569,14 +569,14 @@ static void OccaPAMassApply3D(const int D1D,
|
||||
#endif // MFEM_USE_OCCA
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAMassApply2D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAMassApply2D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -661,14 +661,14 @@ static void PAMassApply2D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_NBZ = 0>
|
||||
static void SmemPAMassApply2D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPAMassApply2D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
MFEM_CONTRACT_VAR(bt_);
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
@@ -784,14 +784,14 @@ static void SmemPAMassApply2D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAMassApply3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAMassApply3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -925,14 +925,14 @@ static void PAMassApply3D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void SmemPAMassApply3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPAMassApply3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &bt_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
MFEM_CONTRACT_VAR(bt_);
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
|
||||
@@ -22,12 +22,12 @@ namespace mfem
|
||||
// PA Vector Diffusion Integrator
|
||||
|
||||
// PA Diffusion Assemble 2D kernel
|
||||
static void PAVectorDiffusionSetup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &c,
|
||||
Vector &op)
|
||||
void PAVectorDiffusionSetup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &c,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -59,12 +59,12 @@ static void PAVectorDiffusionSetup2D(const int Q1D,
|
||||
}
|
||||
|
||||
// PA Diffusion Assemble 3D kernel
|
||||
static void PAVectorDiffusionSetup3D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &c,
|
||||
Vector &op)
|
||||
void PAVectorDiffusionSetup3D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<double> &w,
|
||||
const Vector &j,
|
||||
const Vector &c,
|
||||
Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
@@ -251,7 +251,7 @@ void VectorDiffusionIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
}
|
||||
|
||||
// PA Diffusion Apply 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_VDIM = 0> static
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_VDIM = 0>
|
||||
void PAVectorDiffusionApply2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
@@ -374,7 +374,7 @@ void PAVectorDiffusionApply2D(const int NE,
|
||||
|
||||
// PA Diffusion Apply 3D kernel
|
||||
template<const int T_D1D = 0,
|
||||
const int T_Q1D = 0> static
|
||||
const int T_Q1D = 0>
|
||||
void PAVectorDiffusionApply3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
@@ -606,13 +606,13 @@ void VectorDiffusionIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAVectorDiffusionDiagonal2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAVectorDiffusionDiagonal2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -673,13 +673,13 @@ static void PAVectorDiffusionDiagonal2D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAVectorDiffusionDiagonal3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAVectorDiffusionDiagonal3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Vector &d,
|
||||
Vector &y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
constexpr int DIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
|
||||
+30
-30
@@ -104,14 +104,14 @@ void VectorMassIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
|
||||
template<const int T_D1D = 0,
|
||||
const int T_Q1D = 0>
|
||||
static void PAVectorMassApply2D(const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &Bt_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAVectorMassApply2D(const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &Bt_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -201,14 +201,14 @@ static void PAVectorMassApply2D(const int NE,
|
||||
|
||||
template<const int T_D1D = 0,
|
||||
const int T_Q1D = 0>
|
||||
static void PAVectorMassApply3D(const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &Bt_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAVectorMassApply3D(const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &Bt_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -379,13 +379,13 @@ void VectorMassIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
}
|
||||
|
||||
template<const int T_D1D = 0, const int T_Q1D = 0>
|
||||
static void PAVectorMassAssembleDiagonal2D(const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &Bt_,
|
||||
const Vector &op_,
|
||||
Vector &diag_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAVectorMassAssembleDiagonal2D(const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &Bt_,
|
||||
const Vector &op_,
|
||||
Vector &diag_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -431,13 +431,13 @@ static void PAVectorMassAssembleDiagonal2D(const int NE,
|
||||
}
|
||||
|
||||
template<const int T_D1D = 0, const int T_Q1D = 0>
|
||||
static void PAVectorMassAssembleDiagonal3D(const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &Bt_,
|
||||
const Vector &op_,
|
||||
Vector &diag_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAVectorMassAssembleDiagonal3D(const int NE,
|
||||
const Array<double> &B_,
|
||||
const Array<double> &Bt_,
|
||||
const Vector &op_,
|
||||
Vector &diag_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
@@ -116,15 +116,15 @@ void VectorConvectionNLFIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
|
||||
// PA Convection NL 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAConvectionNLApply2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAConvectionNLApply2D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -252,15 +252,15 @@ static void PAConvectionNLApply2D(const int NE,
|
||||
|
||||
// PA Convection NL 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAConvectionNLApply3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void PAConvectionNLApply3D(const int NE,
|
||||
const Array<double> &b,
|
||||
const Array<double> &g,
|
||||
const Array<double> &bt,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
@@ -558,14 +558,14 @@ static void PAConvectionNLApply3D(const int NE,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_MAX_D1D =0, int T_MAX_Q1D =0>
|
||||
static void SmemPAConvectionNLApply3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void SmemPAConvectionNLApply3D(const int NE,
|
||||
const Array<double> &b_,
|
||||
const Array<double> &g_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
|
||||
+17
-17
@@ -27,14 +27,14 @@ namespace quadrature_interpolator
|
||||
{
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int MAX_D1D = 0, int MAX_Q1D = 0>
|
||||
static void Det2D(const int NE,
|
||||
const double *b,
|
||||
const double *g,
|
||||
const double *x,
|
||||
double *y,
|
||||
const int vdim = 1,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void Det2D(const int NE,
|
||||
const double *b,
|
||||
const double *g,
|
||||
const double *x,
|
||||
double *y,
|
||||
const int vdim = 1,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
constexpr int DIM = 2;
|
||||
static constexpr int NBZ = 1;
|
||||
@@ -79,15 +79,15 @@ static void Det2D(const int NE,
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int MAX_D1D = 0, int MAX_Q1D = 0,
|
||||
bool SMEM = true>
|
||||
static void Det3D(const int NE,
|
||||
const double *b,
|
||||
const double *g,
|
||||
const double *x,
|
||||
double *y,
|
||||
const int vdim = 1,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0,
|
||||
Vector *d_buff = nullptr) // used only with SMEM = false
|
||||
void Det3D(const int NE,
|
||||
const double *b,
|
||||
const double *g,
|
||||
const double *x,
|
||||
double *y,
|
||||
const int vdim = 1,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0,
|
||||
Vector *d_buff = nullptr) // used only with SMEM = false
|
||||
{
|
||||
constexpr int DIM = 3;
|
||||
static constexpr int MQ1 = T_Q1D ? T_Q1D : MAX_Q1D;
|
||||
|
||||
+14
-14
@@ -31,13 +31,13 @@ namespace quadrature_interpolator
|
||||
template<QVectorLayout Q_LAYOUT,
|
||||
int T_VDIM = 0, int T_D1D = 0, int T_Q1D = 0,
|
||||
int T_NBZ = 1, int MAX_D1D = 0, int MAX_Q1D = 0>
|
||||
static void Values2D(const int NE,
|
||||
const double *b_,
|
||||
const double *x_,
|
||||
double *y_,
|
||||
const int vdim = 0,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void Values2D(const int NE,
|
||||
const double *b_,
|
||||
const double *x_,
|
||||
double *y_,
|
||||
const int vdim = 0,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
static constexpr int NBZ = T_NBZ ? T_NBZ : 1;
|
||||
|
||||
@@ -95,13 +95,13 @@ static void Values2D(const int NE,
|
||||
template<QVectorLayout Q_LAYOUT,
|
||||
int T_VDIM = 0, int T_D1D = 0, int T_Q1D = 0,
|
||||
int MAX_D1D = 0, int MAX_Q1D = 0>
|
||||
static void Values3D(const int NE,
|
||||
const double *b_,
|
||||
const double *x_,
|
||||
double *y_,
|
||||
const int vdim = 0,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void Values3D(const int NE,
|
||||
const double *b_,
|
||||
const double *x_,
|
||||
double *y_,
|
||||
const int vdim = 0,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
+18
-18
@@ -31,15 +31,15 @@ namespace quadrature_interpolator
|
||||
template<QVectorLayout Q_LAYOUT, bool GRAD_PHYS,
|
||||
int T_VDIM = 0, int T_D1D = 0, int T_Q1D = 0,
|
||||
int T_NBZ = 1, int MAX_D1D = 0, int MAX_Q1D = 0>
|
||||
static void Derivatives2D(const int NE,
|
||||
const double *b_,
|
||||
const double *g_,
|
||||
const double *j_,
|
||||
const double *x_,
|
||||
double *y_,
|
||||
const int vdim = 0,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void Derivatives2D(const int NE,
|
||||
const double *b_,
|
||||
const double *g_,
|
||||
const double *j_,
|
||||
const double *x_,
|
||||
double *y_,
|
||||
const int vdim = 0,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -139,15 +139,15 @@ static void Derivatives2D(const int NE,
|
||||
template<QVectorLayout Q_LAYOUT, bool GRAD_PHYS,
|
||||
int T_VDIM = 0, int T_D1D = 0, int T_Q1D = 0,
|
||||
int MAX_D1D = 0, int MAX_Q1D = 0>
|
||||
static void Derivatives3D(const int NE,
|
||||
const double *b_,
|
||||
const double *g_,
|
||||
const double *j_,
|
||||
const double *x_,
|
||||
double *y_,
|
||||
const int vdim = 0,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
void Derivatives3D(const int NE,
|
||||
const double *b_,
|
||||
const double *g_,
|
||||
const double *j_,
|
||||
const double *x_,
|
||||
double *y_,
|
||||
const int vdim = 0,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
+20
-20
@@ -61,16 +61,16 @@ namespace quadrature_interpolator
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template<const int T_VDIM, const int T_ND, const int T_NQ>
|
||||
static void Eval2D(const int NE,
|
||||
const int vdim,
|
||||
const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom,
|
||||
const DofToQuad &maps,
|
||||
const Vector &e_vec,
|
||||
Vector &q_val,
|
||||
Vector &q_der,
|
||||
Vector &q_det,
|
||||
const int eval_flags)
|
||||
void Eval2D(const int NE,
|
||||
const int vdim,
|
||||
const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom,
|
||||
const DofToQuad &maps,
|
||||
const Vector &e_vec,
|
||||
Vector &q_val,
|
||||
Vector &q_der,
|
||||
Vector &q_det,
|
||||
const int eval_flags)
|
||||
{
|
||||
using QI = QuadratureInterpolator;
|
||||
|
||||
@@ -209,16 +209,16 @@ static void Eval2D(const int NE,
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template<const int T_VDIM, const int T_ND, const int T_NQ>
|
||||
static void Eval3D(const int NE,
|
||||
const int vdim,
|
||||
const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom,
|
||||
const DofToQuad &maps,
|
||||
const Vector &e_vec,
|
||||
Vector &q_val,
|
||||
Vector &q_der,
|
||||
Vector &q_det,
|
||||
const int eval_flags)
|
||||
void Eval3D(const int NE,
|
||||
const int vdim,
|
||||
const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom,
|
||||
const DofToQuad &maps,
|
||||
const Vector &e_vec,
|
||||
Vector &q_val,
|
||||
Vector &q_der,
|
||||
Vector &q_det,
|
||||
const int eval_flags)
|
||||
{
|
||||
using QI = QuadratureInterpolator;
|
||||
|
||||
|
||||
+1
-1
@@ -1306,7 +1306,7 @@ namespace internal
|
||||
// MFEM_FORALL-based copy kernel -- used by protected methods below.
|
||||
// Needed as a workaround for the nvcc restriction that methods with MFEM_FORALL
|
||||
// in them must to be public.
|
||||
static inline void device_copy(double *d_dest, const double *d_src, int size)
|
||||
inline void device_copy(double *d_dest, const double *d_src, int size)
|
||||
{
|
||||
MFEM_FORALL(i, size, d_dest[i] = d_src[i];);
|
||||
}
|
||||
|
||||
+1
-1
@@ -234,7 +234,7 @@ void TMOPRefinerEstimator::SetTriIntRules()
|
||||
|
||||
// Reftype = 0 // original element
|
||||
const int Nvert = 3, NEsplit = 1;
|
||||
Mesh meshsplit(2, Nvert, NEsplit, 0 ,2);
|
||||
Mesh meshsplit(2, Nvert, NEsplit, 0,2);
|
||||
const double tri_v[3][2] =
|
||||
{
|
||||
{0, 0}, {1, 0}, {0, 1}
|
||||
|
||||
+7
-1
@@ -164,7 +164,13 @@ __device__ void abort_msg(T & msg)
|
||||
#endif
|
||||
|
||||
// Abort inside a device kernel
|
||||
#if defined(__CUDA_ARCH__)
|
||||
#if defined(__CUDA_ARCH__) && defined(_WIN32)
|
||||
#define MFEM_ABORT_KERNEL(msg) \
|
||||
{ \
|
||||
printf(msg); \
|
||||
__debugbreak(); \
|
||||
}
|
||||
#elif defined(__CUDA_ARCH__)
|
||||
#define MFEM_ABORT_KERNEL(msg) \
|
||||
{ \
|
||||
printf(msg); \
|
||||
|
||||
@@ -79,7 +79,13 @@ int isockstream::establish()
|
||||
int on=1;
|
||||
setsockopt(port, SOL_SOCKET, SO_REUSEADDR, (char *)(&on), sizeof(on));
|
||||
|
||||
if (bind(port,(const sockaddr*)&sa,(socklen_t)sizeof(struct sockaddr_in)) < 0)
|
||||
if (bind(
|
||||
#ifdef _WIN32
|
||||
(SOCKET)port
|
||||
#else
|
||||
port
|
||||
#endif
|
||||
,(const sockaddr*)&sa,(socklen_t)sizeof(struct sockaddr_in)) < 0)
|
||||
{
|
||||
mfem::err << "isockstream::establish(): bind() failed!" << endl;
|
||||
close(port);
|
||||
|
||||
+3325
-2996
File diff suppressed because it is too large
Load Diff
@@ -78,16 +78,6 @@ if (MFEM_USE_MPI)
|
||||
endif()
|
||||
endif()
|
||||
|
||||
if (MFEM_USE_ARPACK)
|
||||
list(APPEND SRCS eigensolvers.cpp arpack.cpp)
|
||||
list(APPEND HDRS eigensolvers.hpp arpack.hpp)
|
||||
endif()
|
||||
|
||||
if (MFEM_USE_SPECTRA)
|
||||
list(APPEND SRCS spectra.cpp)
|
||||
list(APPEND HDRS eigen.hpp spectra.hpp)
|
||||
endif()
|
||||
|
||||
if (MFEM_USE_SUNDIALS)
|
||||
list(APPEND SRCS sundials.cpp)
|
||||
list(APPEND HDRS sundials.hpp)
|
||||
|
||||
-1122
File diff suppressed because it is too large
Load Diff
@@ -1,240 +0,0 @@
|
||||
// Copyright (c) 2010-2020, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#ifndef MFEM_ARPACK
|
||||
#define MFEM_ARPACK
|
||||
|
||||
#include "../config/config.hpp"
|
||||
|
||||
#ifdef MFEM_USE_ARPACK
|
||||
|
||||
#include <string>
|
||||
|
||||
using namespace std;
|
||||
|
||||
#ifdef MFEM_USE_MPI
|
||||
#include <mpi.h>
|
||||
#include "hypre.hpp"
|
||||
#endif
|
||||
|
||||
#include "operator.hpp"
|
||||
|
||||
#define DSAUPD dsaupd_
|
||||
#define DSEUPD dseupd_
|
||||
|
||||
#ifdef MFEM_USE_MPI
|
||||
#define PDSAUPD pdsaupd_
|
||||
#define PDSEUPD pdseupd_
|
||||
#endif
|
||||
|
||||
extern "C" void DSAUPD(int *ido,char *bmat, int *n,
|
||||
char *which, int *nev,double *tol,double *resid,
|
||||
int *ncv,double *v, int *ldv,
|
||||
int *iparam, int *ipntr,
|
||||
double *workd, double *workl, int *lworkl, int *info);
|
||||
|
||||
extern "C" void DSEUPD(int *, char *,int *, double *,
|
||||
double *,int *, double *,char *, int *, char *,
|
||||
int *,double *,double *,int *, double *,
|
||||
int *, int *,int *, double *,
|
||||
double *,int *, int *);
|
||||
|
||||
#ifdef MFEM_USE_MPI
|
||||
|
||||
extern "C" void PDSAUPD(int *comm, int *ido,char *bmat, int *n,
|
||||
char *which, int *nev,double *tol,double *resid,
|
||||
int *ncv,double *v, int *ldv,
|
||||
int *iparam, int *ipntr,
|
||||
double *workd, double *workl, int *lworkl, int *info);
|
||||
|
||||
extern "C" void PDSEUPD(int *comm, int *, char *,int *, double *,
|
||||
double *,int *, double *,char *, int *, char *,
|
||||
int *,double *,double *,int *, double *,
|
||||
int *, int *,int *, double *,
|
||||
double *,int *, int *);
|
||||
|
||||
#endif
|
||||
|
||||
extern "C" {
|
||||
void arpackgetcommdbg_(int *,int *,int *);
|
||||
void arpacksetcommdbg_(int *,int *,int *);
|
||||
void arpacksymdbg_(int *,int *,int *,int *,int *,int *,int *);
|
||||
void arpacknonsymdbg_(int *,int *,int *,int *,int *,int *,int *);
|
||||
void arpackcmplxdbg_(int *,int *,int *,int *,int *,int *,int *);
|
||||
}
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
class ArPackSym : public Eigensolver
|
||||
{
|
||||
public:
|
||||
|
||||
ArPackSym();
|
||||
virtual ~ArPackSym();
|
||||
|
||||
/** ARPACK modes are described in section 3.5 of the ARPACK manual.
|
||||
Mode 1: regular mode to solve A x = lambda x
|
||||
No solver and no mass matrix are needed.
|
||||
Mode 2: regular inverse mode to solve A x = lambda M x
|
||||
Both A and M are needed and the solver should compute M^{-1}.
|
||||
Mode 3: shift-invert mode to solve either A x = lambda x
|
||||
or A x = lambda M x
|
||||
Mass matrix is optional. The solver should compute
|
||||
(A-sigma I)^{-1} or (A-sigma M)^{-1}. The shift parameter,
|
||||
sigma, also needs to be set with SetShift().
|
||||
Mode 4: Buckling mode to solve K x = lambda K_G x
|
||||
K is set using SetMassMatrix(), K_G is set using SetOperator(),
|
||||
and the solver should compute (K-sigma K_G)^{-1}. The shift
|
||||
parameter, sigma, also needs to be set with SetShift().
|
||||
Mode 5: Cayley mode to solve A x = lambda M x
|
||||
Both A and M are needed and the solver should compute
|
||||
(A - sigma M)^{-1}. The shift parameter, sigma, also needs
|
||||
to be set with SetShift().
|
||||
*/
|
||||
void SetMode(int mode);
|
||||
|
||||
inline void SetTol(double tol) { tol_ = tol; }
|
||||
inline void SetMaxIter(int max_iter) { max_iter_ = max_iter; }
|
||||
inline void SetPrintLevel(int logging) { logging_ = logging; }
|
||||
inline void SetShift(double sigma) { sigma_ = sigma; }
|
||||
inline void SetNumModes(int num_eigs) { nev_ = num_eigs; }
|
||||
|
||||
virtual void SetSolver(Solver & solver);
|
||||
virtual void SetOperator(Operator & A);
|
||||
virtual void SetMassMatrix(Operator & M);
|
||||
|
||||
void Solve();
|
||||
|
||||
/// Collect the converged eigenvalues
|
||||
virtual void GetEigenvalues(Array<double> & eigenvalues);
|
||||
|
||||
/// Extract a single eigenvector
|
||||
virtual Vector & GetEigenvector(unsigned int i);
|
||||
|
||||
/// Transfer ownership of the converged eigenvectors
|
||||
Vector ** StealEigenvectors();
|
||||
|
||||
protected:
|
||||
|
||||
int myid_; // Index of this processor
|
||||
int max_iter_;
|
||||
int logging_;
|
||||
|
||||
// The following variables are for ARPACK
|
||||
int nloc_; // number of items stored locally
|
||||
int nev_; // number of requested eigenvalues
|
||||
int ncv_; // number of ritz vectors
|
||||
int rvec_; // boolean to return eigenvectors as well
|
||||
int mode_; // 1 = standard, 2 = generalized, 3 = shift invert,
|
||||
// 4 = buckling, 5 = Cayley
|
||||
int lworkl_; // length of lworkl_ work array
|
||||
int iparam_[12]; // arpack parameters
|
||||
int ipntr_[12]; // arpack pointers
|
||||
|
||||
char bmat_; // I for standard problem, G for generalized
|
||||
char which_[3]; // spectrum portion: LA, SA, LM, SM, BE
|
||||
char hwmny_; // DSEUPD: A for all eigenvalues, S for some
|
||||
|
||||
double tol_; // relative accuracy bound for Ritz values
|
||||
double sigma_; // eigenvalue shift parameter
|
||||
|
||||
int * select_;// workspace used during eigenvalue computation
|
||||
double * dv_; // Ritz values
|
||||
double * v_; // ncv Lanczos basis vectors
|
||||
double * resid_; // residual vector
|
||||
double * workd_; // work array for 3 vectors used in Arnoldi iteration
|
||||
double * workl_; // work array
|
||||
|
||||
// Operators and Vectors needed outside of ARPACK
|
||||
Solver * solver_;
|
||||
Operator * A_;
|
||||
Operator * B_;
|
||||
|
||||
Vector * w_;
|
||||
Vector * x_;
|
||||
Vector * y_;
|
||||
Vector * z_;
|
||||
|
||||
Vector ** eigenvectors_;
|
||||
|
||||
string solverName_;
|
||||
|
||||
void reverseComm();
|
||||
|
||||
int reverseCommMode1();
|
||||
int reverseCommMode2();
|
||||
int reverseCommMode3();
|
||||
int reverseCommMode4();
|
||||
int reverseCommMode5();
|
||||
|
||||
virtual void prepareEigenvectors();
|
||||
|
||||
void printErrors(const int & info, const int iparam[],
|
||||
const char & bmat, const int & n,
|
||||
const char which[],
|
||||
const int & nev, const int & ncv,
|
||||
const int & lworkl );
|
||||
|
||||
private:
|
||||
|
||||
virtual int computeNlocf() { return nloc_; }
|
||||
virtual int computeIter(int & ido);
|
||||
virtual int computeEigs();
|
||||
|
||||
};
|
||||
|
||||
#ifdef MFEM_USE_MPI
|
||||
|
||||
class ParArPackSym : public ArPackSym
|
||||
{
|
||||
public:
|
||||
ParArPackSym(MPI_Comm comm);
|
||||
virtual ~ParArPackSym() {}
|
||||
|
||||
void SetOperator(Operator & A);
|
||||
void SetMassMatrix(Operator & M);
|
||||
|
||||
/// Collect the converged eigenvalues
|
||||
void GetEigenvalues(Array<double> & eigenvalues);
|
||||
|
||||
/// Extract a single eigenvector
|
||||
Vector & GetEigenvector(unsigned int i);
|
||||
|
||||
/// Transfer ownership of the converged eigenvectors
|
||||
// HypreParVector ** StealEigenvectors();
|
||||
Vector ** StealEigenvectors();
|
||||
|
||||
protected:
|
||||
|
||||
void prepareEigenvectors();
|
||||
|
||||
private:
|
||||
|
||||
MPI_Comm comm_;
|
||||
MPI_Fint commf_; // Fortran style MPI communicator
|
||||
int numProcs_; // Number of processors
|
||||
|
||||
HYPRE_Int * part_; // parallel partitioning for eigenvectors
|
||||
|
||||
int computeNlocf();
|
||||
int computeIter(int & ido);
|
||||
int computeEigs();
|
||||
|
||||
};
|
||||
|
||||
#endif // MFEM_USE_MPI
|
||||
|
||||
};
|
||||
|
||||
#endif // MFEM_USE_ARPACK
|
||||
|
||||
#endif // MFEM_ARPACK
|
||||
@@ -1,94 +0,0 @@
|
||||
#ifndef MFEM_EIGEN_HPP
|
||||
#define MFEM_EIGEN_HPP
|
||||
|
||||
#include <vector>
|
||||
#include <Eigen/Sparse>
|
||||
|
||||
#include "vector.hpp"
|
||||
#include "sparsemat.hpp"
|
||||
#include "densemat.hpp"
|
||||
|
||||
namespace mfem{
|
||||
/** @brief Eigen template specialization for vector conversion */
|
||||
template <typename T>
|
||||
struct VectorConverter {
|
||||
static Vector from(const Eigen::Matrix<T, Eigen::Dynamic, 1>& other)
|
||||
{
|
||||
Vector v(other.rows());
|
||||
|
||||
for (size_t i = 0; i < v.Size(); i++)
|
||||
v(i) = other(i);
|
||||
|
||||
return std::move(v);
|
||||
}
|
||||
|
||||
static Eigen::Matrix<T, Eigen::Dynamic, 1> to(const Vector& other)
|
||||
{
|
||||
Eigen::Matrix<T, Eigen::Dynamic, 1> v(other.Size());
|
||||
|
||||
for (size_t i = 0; i < v.Size(); i++)
|
||||
v(i) = other(i);
|
||||
|
||||
return std::move(v);
|
||||
}
|
||||
};
|
||||
|
||||
/** @brief Eigen template specialization for dense matrix conversion */
|
||||
template <typename T>
|
||||
struct DenseMatrixConverter {
|
||||
static DenseMatrix from(const Eigen::Matrix<T, Eigen::Dynamic, Eigen::Dynamic>& other)
|
||||
{
|
||||
DenseMatrix mat(other.rows(), other.cols());
|
||||
|
||||
for (size_t j = 0; j < mat.Width(); j++)
|
||||
for (size_t i = 0; i < mat.Height(); i++)
|
||||
mat(i, j) = other(i, j);
|
||||
|
||||
return mat;
|
||||
}
|
||||
|
||||
static Eigen::Matrix<T, Eigen::Dynamic, Eigen::Dynamic> to(const DenseMatrix& other)
|
||||
{
|
||||
Eigen::Matrix<T, Eigen::Dynamic, Eigen::Dynamic> mat(other.Height(), other.Width());
|
||||
|
||||
for (size_t j = 0; j < mat.cols(); j++)
|
||||
for (size_t i = 0; i < mat.rows(); i++)
|
||||
mat(i, j) = other(i, j);
|
||||
|
||||
return mat;
|
||||
}
|
||||
};
|
||||
|
||||
/** @brief Eigen template specialization for sparse matrix conversion */
|
||||
template <class T>
|
||||
struct SparseMatrixConverter {
|
||||
static SparseMatrix from(const Eigen::SparseMatrix<T, Eigen::RowMajor>& other)
|
||||
{
|
||||
return SparseMatrix(other.outerIndexPtr(), other.innerIndexPtr(), other.valuePtr(), other.rows(), other.cols());
|
||||
}
|
||||
|
||||
static Eigen::SparseMatrix<T, Eigen::RowMajor> to(const SparseMatrix& other)
|
||||
{
|
||||
// MFEM memory info
|
||||
const int *I = other.GetI(), *J = other.GetJ();
|
||||
const T* Data = other.GetData();
|
||||
|
||||
// Eigen triplet
|
||||
std::vector<Eigen::Triplet<double>> tripletList;
|
||||
tripletList.reserve(other.GetMemoryData().Capacity());
|
||||
|
||||
for (size_t i = 0; i < other.Size(); i++) {
|
||||
for (size_t k = I[i], end = I[i + 1]; k < end; k++)
|
||||
tripletList.push_back(Eigen::Triplet<double>(i, J[k], Data[k]));
|
||||
}
|
||||
|
||||
// Create Eigen sparse matrix
|
||||
Eigen::SparseMatrix<T, Eigen::RowMajor> mat(other.Height(), other.Width());
|
||||
mat.setFromTriplets(tripletList.begin(), tripletList.end());
|
||||
|
||||
return mat;
|
||||
}
|
||||
};
|
||||
}
|
||||
|
||||
#endif // MFEM_EIGEN_HPP
|
||||
@@ -1,23 +0,0 @@
|
||||
// Copyright (c) 2010-2020, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "linalg.hpp"
|
||||
#include "eigensolver.hpp"
|
||||
|
||||
using namespace std;
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
Eigensolver::Eigensolver()
|
||||
{}
|
||||
|
||||
};
|
||||
@@ -1,53 +0,0 @@
|
||||
// Copyright (c) 2010-2020, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#ifndef MFEM_EIGENSOLVERS
|
||||
#define MFEM_EIGENSOLVERS
|
||||
|
||||
#include "vector.hpp"
|
||||
#include "operator.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// Abstract Eigensolver
|
||||
class Eigensolver
|
||||
{
|
||||
public:
|
||||
|
||||
Eigensolver();
|
||||
virtual ~Eigensolver() {}
|
||||
|
||||
virtual void SetTol(double tol) = 0;
|
||||
virtual void SetMaxIter(int max_iter) = 0;
|
||||
virtual void SetPrintLevel(int logging) = 0;
|
||||
virtual void SetNumModes(int num_eigs) = 0;
|
||||
|
||||
virtual void SetOperator(Operator & A) = 0;
|
||||
virtual void SetMassMatrix(Operator & M) = 0;
|
||||
|
||||
/// Perform the eigenvalue solve
|
||||
virtual void Solve() = 0;
|
||||
|
||||
/// Collect the converged eigenvalues
|
||||
virtual void GetEigenvalues(Array<double> & eigenvalues) = 0;
|
||||
|
||||
/// Extract a single eigenvector
|
||||
virtual Vector & GetEigenvector(unsigned int i) = 0;
|
||||
|
||||
/// Transfer ownership of the converged eigenvectors
|
||||
virtual Vector ** StealEigenvectors() = 0;
|
||||
|
||||
};
|
||||
|
||||
}
|
||||
|
||||
#endif
|
||||
+1
-1
@@ -378,7 +378,7 @@ void Swap(T &a, T &b)
|
||||
b = tmp;
|
||||
}
|
||||
|
||||
const double Epsilon = std::numeric_limits<double>::epsilon();
|
||||
constexpr double Epsilon = std::numeric_limits<double>::epsilon();
|
||||
|
||||
/// Utility function used in CalcSingularvalue<3>.
|
||||
MFEM_HOST_DEVICE static inline
|
||||
|
||||
@@ -48,16 +48,6 @@
|
||||
#include "ginkgo.hpp"
|
||||
#endif
|
||||
|
||||
#ifdef MFEM_USE_ARPACK
|
||||
#include "eigensolver.hpp"
|
||||
#include "arpack.hpp"
|
||||
#endif
|
||||
|
||||
#ifdef MFEM_USE_SPECTRA
|
||||
#include "eigen.hpp"
|
||||
#include "spectra.hpp"
|
||||
#endif
|
||||
|
||||
#ifdef MFEM_USE_MPI
|
||||
#include "hypre_parcsr.hpp"
|
||||
#include "hypre.hpp"
|
||||
|
||||
@@ -1,157 +0,0 @@
|
||||
#include "spectra.hpp"
|
||||
|
||||
#include "../fem/bilinearform.hpp"
|
||||
|
||||
namespace mfem {
|
||||
SpectraEigenSolver::SpectraEigenSolver()
|
||||
{
|
||||
// Init params
|
||||
_nconv = 0;
|
||||
_nev = 1;
|
||||
_ncv = 1;
|
||||
_max_iter = 1000;
|
||||
_tol = 1e-3;
|
||||
}
|
||||
|
||||
SpectraEigenSolver::~SpectraEigenSolver()
|
||||
{
|
||||
delete _A_s, _B_s, _S, _G;
|
||||
}
|
||||
|
||||
/// Set dimension of Krylov subspace in the Lanczos method
|
||||
SpectraEigenSolver& SpectraEigenSolver::SetKrylov(double ncv)
|
||||
{
|
||||
_ncv = ncv;
|
||||
|
||||
return *this;
|
||||
}
|
||||
|
||||
/// Set solver tolerance
|
||||
SpectraEigenSolver& SpectraEigenSolver::SetTol(double tol)
|
||||
{
|
||||
_tol = tol;
|
||||
|
||||
return *this;
|
||||
}
|
||||
|
||||
/// Set maximum number of iterations
|
||||
SpectraEigenSolver& SpectraEigenSolver::SetMaxIter(int max_iter)
|
||||
{
|
||||
_max_iter = max_iter;
|
||||
|
||||
return *this;
|
||||
}
|
||||
|
||||
/// Set the number of required eigenmodes
|
||||
SpectraEigenSolver& SpectraEigenSolver::SetNumModes(int nev)
|
||||
{
|
||||
_nev = nev;
|
||||
|
||||
return *this;
|
||||
}
|
||||
|
||||
/// Set operator for standard eigenvalue problem (A*x = lambda*x)
|
||||
SpectraEigenSolver& SpectraEigenSolver::SetOperator(const Operator& A)
|
||||
{
|
||||
// Set EIGEN operators
|
||||
_A_e = SparseMatrixConverter<double>::to(static_cast<const BilinearForm&>(A).SpMat());
|
||||
|
||||
// Set SPECTRA operators
|
||||
_A_s = new SparseSymMatProd<double>(_A_e);
|
||||
|
||||
return *this;
|
||||
}
|
||||
|
||||
/// Set operator for generalized eigenvalue problem (A*x = lambda*B*x)
|
||||
SpectraEigenSolver& SpectraEigenSolver::SetOperators(const Operator& A, const Operator& B)
|
||||
{
|
||||
// Set EIGEN operators
|
||||
_A_e = SparseMatrixConverter<double>::to(static_cast<const BilinearForm&>(A).SpMat());
|
||||
_B_e = SparseMatrixConverter<double>::to(static_cast<const BilinearForm&>(B).SpMat());
|
||||
|
||||
// Set SPECTRA operators
|
||||
_A_s = new SparseSymMatProd<double>(_A_e);
|
||||
_B_s = new SparseCholesky<double>(_B_e);
|
||||
|
||||
return *this;
|
||||
}
|
||||
|
||||
/// Solve the eigenvalue problem for the specified number of eigenvalues
|
||||
void SpectraEigenSolver::Solve()
|
||||
{
|
||||
// Set the dimension of the Krilov space equal to the number of requested eigenvalues if necessary
|
||||
if (_ncv < _nev)
|
||||
_ncv = _nev;
|
||||
|
||||
if (!_B_s) {
|
||||
_S = new SymEigsSolver<SparseSymMatProd<double>>(*_A_s, _nev, _ncv);
|
||||
_S->init();
|
||||
_nconv = _S->compute(SortRule::SmallestMagn, _max_iter, _tol, SortRule::SmallestMagn);
|
||||
}
|
||||
else {
|
||||
_G = new SymGEigsSolver<SparseSymMatProd<double>, SparseCholesky<double>, GEigsMode::Cholesky>(*_A_s, *_B_s, _nev, _ncv);
|
||||
_G->init();
|
||||
_nconv = _G->compute(SortRule::SmallestMagn, _max_iter, _tol, SortRule::SmallestMagn);
|
||||
}
|
||||
}
|
||||
|
||||
/// Get the number of converged eigenvalues
|
||||
int SpectraEigenSolver::GetNumConverged()
|
||||
{
|
||||
return _nconv;
|
||||
}
|
||||
|
||||
/// Get the corresponding eigenvalue
|
||||
double SpectraEigenSolver::GetEigenvalue(unsigned int i) const
|
||||
{
|
||||
if (!_B_s) {
|
||||
if (_S->info() == CompInfo::Successful && i < _nconv)
|
||||
return _S->eigenvalues()[i];
|
||||
else
|
||||
return 0;
|
||||
}
|
||||
else {
|
||||
if (_G->info() == CompInfo::Successful && i < _nconv)
|
||||
return _G->eigenvalues()[i];
|
||||
else
|
||||
return 0;
|
||||
}
|
||||
}
|
||||
|
||||
Eigen::VectorXd SpectraEigenSolver::GetEigenvalues(unsigned int i) const
|
||||
{
|
||||
if (!_B_s) {
|
||||
if (_S->info() == CompInfo::Successful && i < _nconv)
|
||||
return _S->eigenvalues().segment(0, i);
|
||||
}
|
||||
else {
|
||||
if (_G->info() == CompInfo::Successful && i < _nconv)
|
||||
return _G->eigenvalues().segment(0, i);
|
||||
}
|
||||
}
|
||||
|
||||
/// Get the corresponding eigenvector
|
||||
Eigen::VectorXd SpectraEigenSolver::GetEigenvector(unsigned int i) const
|
||||
{
|
||||
if (!_B_s) {
|
||||
if (_S->info() == CompInfo::Successful && i < _nconv)
|
||||
return _S->eigenvectors().col(i);
|
||||
}
|
||||
else {
|
||||
if (_G->info() == CompInfo::Successful && i < _nconv)
|
||||
return _G->eigenvectors().col(i);
|
||||
}
|
||||
}
|
||||
|
||||
Eigen::MatrixXd SpectraEigenSolver::GetEigenvectors(unsigned int i) const
|
||||
{
|
||||
if (!_B_s) {
|
||||
if (_S->info() == CompInfo::Successful && i < _nconv)
|
||||
return _S->eigenvectors().topRows(i);
|
||||
}
|
||||
else {
|
||||
if (_G->info() == CompInfo::Successful && i < _nconv)
|
||||
return _G->eigenvectors().topRows(i);
|
||||
}
|
||||
}
|
||||
} // namespace mfem
|
||||
@@ -1,77 +0,0 @@
|
||||
#ifndef MFEM_SPECTRA_HPP
|
||||
#define MFEM_SPECTRA_HPP
|
||||
|
||||
#include <Spectra/GenEigsSolver.h>
|
||||
#include <Spectra/MatOp/SparseCholesky.h>
|
||||
#include <Spectra/MatOp/SparseGenMatProd.h>
|
||||
#include <Spectra/SymEigsSolver.h>
|
||||
#include <Spectra/SymGEigsSolver.h>
|
||||
|
||||
#include "eigen.hpp"
|
||||
|
||||
using namespace Spectra;
|
||||
|
||||
namespace mfem {
|
||||
class SpectraEigenSolver {
|
||||
public:
|
||||
SpectraEigenSolver();
|
||||
|
||||
virtual ~SpectraEigenSolver();
|
||||
|
||||
/// Set dimension of Krylov subspace in the Lanczos method
|
||||
SpectraEigenSolver& SetKrylov(double ncv);
|
||||
|
||||
/// Set solver tolerance
|
||||
SpectraEigenSolver& SetTol(double tol);
|
||||
|
||||
/// Set maximum number of iterations
|
||||
SpectraEigenSolver& SetMaxIter(int max_iter);
|
||||
|
||||
/// Set the number of required eigenmodes
|
||||
SpectraEigenSolver& SetNumModes(int nev);
|
||||
|
||||
/// Set operator for standard eigenvalue problem (A*x = lambda*x)
|
||||
SpectraEigenSolver& SetOperator(const Operator& A);
|
||||
|
||||
/// Set operator for generalized eigenvalue problem (A*x = lambda*B*x)
|
||||
SpectraEigenSolver& SetOperators(const Operator& A, const Operator& B);
|
||||
|
||||
/// Solve the eigenvalue problem for the specified number of eigenvalues
|
||||
void Solve();
|
||||
|
||||
/// Get the number of converged eigenvalues
|
||||
int GetNumConverged();
|
||||
|
||||
/// Get the corresponding eigenvalue
|
||||
double GetEigenvalue(unsigned int i) const;
|
||||
|
||||
Eigen::VectorXd GetEigenvalues(unsigned int i = 0) const;
|
||||
|
||||
/// Get the corresponding eigenvector
|
||||
Eigen::VectorXd GetEigenvector(unsigned int i) const;
|
||||
|
||||
Eigen::MatrixXd GetEigenvectors(unsigned int i) const;
|
||||
|
||||
protected:
|
||||
// Params
|
||||
int _nconv, _nev, _ncv, _max_iter;
|
||||
double _tol;
|
||||
|
||||
// EIGEN Operators
|
||||
Eigen::SparseMatrix<double> _A_e, _B_e;
|
||||
|
||||
// Spectra Operators
|
||||
SparseSymMatProd<double>* _A_s = nullptr;
|
||||
SparseCholesky<double>* _B_s = nullptr;
|
||||
|
||||
// Eigenvalue solution based on Spectra
|
||||
SymEigsSolver<SparseSymMatProd<double>>* _S = nullptr;
|
||||
SymGEigsSolver<SparseSymMatProd<double>, SparseCholesky<double>, GEigsMode::Cholesky>* _G = nullptr;
|
||||
|
||||
// // Eigenvalue solution based on Eigen
|
||||
// Eigen::SelfAdjointEigenSolver<Eigen::MatrixXd>* _S = nullptr;
|
||||
// Eigen::GeneralizedSelfAdjointEigenSolver<Eigen::MatrixXd>* _G = nullptr;
|
||||
};
|
||||
} // namespace mfem
|
||||
|
||||
#endif // MFEM_SPECTRA_HPP
|
||||
+1
-1
@@ -1677,7 +1677,7 @@ int KINSolver::GradientMult(N_Vector v, N_Vector Jv, N_Vector u,
|
||||
|
||||
// Wrapper for evaluating linear systems J u = b
|
||||
int KINSolver::LinSysSetup(N_Vector u, N_Vector, SUNMatrix J,
|
||||
void *, N_Vector , N_Vector )
|
||||
void *, N_Vector, N_Vector )
|
||||
{
|
||||
const SundialsNVector mfem_u(u);
|
||||
KINSolver *self = static_cast<KINSolver*>(GET_CONTENT(J));
|
||||
|
||||
@@ -274,7 +274,7 @@ endif
|
||||
# List of MFEM dependencies, that require the *_LIB variable to be non-empty
|
||||
MFEM_REQ_LIB_DEPS = SUPERLU MUMPS METIS FMS CONDUIT SIDRE LAPACK SUNDIALS MESQUITE\
|
||||
SUITESPARSE STRUMPACK GINKGO GNUTLS NETCDF PETSC SLEPC MPFR PUMI HIOP GSLIB\
|
||||
OCCA CEED RAJA UMPIRE MKL_CPARDISO AMGX CALIPER ARPACK
|
||||
OCCA CEED RAJA UMPIRE MKL_CPARDISO AMGX CALIPER
|
||||
|
||||
PETSC_ERROR_MSG = $(if $(PETSC_FOUND),,. PETSC config not found: $(PETSC_VARS))
|
||||
SLEPC_ERROR_MSG = $(if $(SLEPC_FOUND),,. SLEPC config not found: $(SLEPC_VARS))
|
||||
@@ -292,7 +292,7 @@ ifeq ($(MAKECMDGOALS),config)
|
||||
endif
|
||||
|
||||
# List of MFEM dependencies, processed below
|
||||
MFEM_DEPENDENCIES = $(MFEM_REQ_LIB_DEPS) SPECTRA LIBUNWIND OPENMP CUDA HIP
|
||||
MFEM_DEPENDENCIES = $(MFEM_REQ_LIB_DEPS) LIBUNWIND OPENMP CUDA HIP
|
||||
|
||||
# List of deprecated MFEM dependencies, processed below
|
||||
MFEM_LEGACY_DEPENDENCIES = OPENMP
|
||||
@@ -340,7 +340,7 @@ MFEM_DEFINES = MFEM_VERSION MFEM_VERSION_STRING MFEM_GIT_STRING MFEM_USE_MPI\
|
||||
MFEM_USE_PUMI MFEM_USE_HIOP MFEM_USE_GSLIB MFEM_USE_CUDA MFEM_USE_HIP\
|
||||
MFEM_USE_OCCA MFEM_USE_CEED MFEM_USE_RAJA MFEM_USE_UMPIRE MFEM_USE_SIMD\
|
||||
MFEM_USE_ADIOS2 MFEM_USE_MKL_CPARDISO MFEM_USE_AMGX MFEM_USE_MUMPS\
|
||||
MFEM_USE_CALIPER MFEM_USE_ARPACK MFEM_USE_SPECTRA MFEM_SOURCE_DIR MFEM_INSTALL_DIR
|
||||
MFEM_USE_CALIPER MFEM_SOURCE_DIR MFEM_INSTALL_DIR
|
||||
|
||||
# List of makefile variables that will be written to config.mk:
|
||||
MFEM_CONFIG_VARS = MFEM_CXX MFEM_HOST_CXX MFEM_CPPFLAGS MFEM_CXXFLAGS\
|
||||
@@ -652,8 +652,6 @@ status info:
|
||||
$(info MFEM_USE_SUNDIALS = $(MFEM_USE_SUNDIALS))
|
||||
$(info MFEM_USE_MESQUITE = $(MFEM_USE_MESQUITE))
|
||||
$(info MFEM_USE_SUITESPARSE = $(MFEM_USE_SUITESPARSE))
|
||||
$(info MFEM_USE_ARPACK = $(MFEM_USE_ARPACK))
|
||||
$(info MFEM_USE_SPECTRA = $(MFEM_USE_SPECTRA))
|
||||
$(info MFEM_USE_SUPERLU = $(MFEM_USE_SUPERLU))
|
||||
$(info MFEM_USE_MUMPS = $(MFEM_USE_MUMPS))
|
||||
$(info MFEM_USE_STRUMPACK = $(MFEM_USE_STRUMPACK))
|
||||
|
||||
+27
-27
@@ -2850,14 +2850,14 @@ void Mesh::Make3D(int nx, int ny, int nz, Element::Type type,
|
||||
y = sfc[3*k + 1];
|
||||
z = sfc[3*k + 2];
|
||||
|
||||
ind[0] = VTX(x , y , z );
|
||||
ind[1] = VTX(x+1, y , z );
|
||||
ind[0] = VTX(x, y, z );
|
||||
ind[1] = VTX(x+1, y, z );
|
||||
ind[2] = VTX(x+1, y+1, z );
|
||||
ind[3] = VTX(x , y+1, z );
|
||||
ind[4] = VTX(x , y , z+1);
|
||||
ind[5] = VTX(x+1, y , z+1);
|
||||
ind[3] = VTX(x, y+1, z );
|
||||
ind[4] = VTX(x, y, z+1);
|
||||
ind[5] = VTX(x+1, y, z+1);
|
||||
ind[6] = VTX(x+1, y+1, z+1);
|
||||
ind[7] = VTX(x , y+1, z+1);
|
||||
ind[7] = VTX(x, y+1, z+1);
|
||||
|
||||
AddHex(ind, 1);
|
||||
}
|
||||
@@ -2870,12 +2870,12 @@ void Mesh::Make3D(int nx, int ny, int nz, Element::Type type,
|
||||
{
|
||||
for (x = 0; x < nx; x++)
|
||||
{
|
||||
ind[0] = VTX(x , y , z );
|
||||
ind[1] = VTX(x+1, y , z );
|
||||
ind[0] = VTX(x, y, z );
|
||||
ind[1] = VTX(x+1, y, z );
|
||||
ind[2] = VTX(x+1, y+1, z );
|
||||
ind[3] = VTX(x , y+1, z );
|
||||
ind[4] = VTX(x , y , z+1);
|
||||
ind[5] = VTX(x+1, y , z+1);
|
||||
ind[3] = VTX(x, y+1, z );
|
||||
ind[4] = VTX(x, y, z+1);
|
||||
ind[5] = VTX(x+1, y, z+1);
|
||||
ind[6] = VTX(x+1, y+1, z+1);
|
||||
ind[7] = VTX( x, y+1, z+1);
|
||||
if (type == Element::TETRAHEDRON)
|
||||
@@ -2906,10 +2906,10 @@ void Mesh::Make3D(int nx, int ny, int nz, Element::Type type,
|
||||
{
|
||||
for (x = 0; x < nx; x++)
|
||||
{
|
||||
ind[0] = VTX(x , y , 0);
|
||||
ind[1] = VTX(x , y+1, 0);
|
||||
ind[0] = VTX(x, y, 0);
|
||||
ind[1] = VTX(x, y+1, 0);
|
||||
ind[2] = VTX(x+1, y+1, 0);
|
||||
ind[3] = VTX(x+1, y , 0);
|
||||
ind[3] = VTX(x+1, y, 0);
|
||||
if (type == Element::TETRAHEDRON)
|
||||
{
|
||||
AddBdrQuadAsTriangles(ind, 1);
|
||||
@@ -2929,10 +2929,10 @@ void Mesh::Make3D(int nx, int ny, int nz, Element::Type type,
|
||||
{
|
||||
for (x = 0; x < nx; x++)
|
||||
{
|
||||
ind[0] = VTX(x , y , nz);
|
||||
ind[1] = VTX(x+1, y , nz);
|
||||
ind[0] = VTX(x, y, nz);
|
||||
ind[1] = VTX(x+1, y, nz);
|
||||
ind[2] = VTX(x+1, y+1, nz);
|
||||
ind[3] = VTX(x , y+1, nz);
|
||||
ind[3] = VTX(x, y+1, nz);
|
||||
if (type == Element::TETRAHEDRON)
|
||||
{
|
||||
AddBdrQuadAsTriangles(ind, 6);
|
||||
@@ -2952,10 +2952,10 @@ void Mesh::Make3D(int nx, int ny, int nz, Element::Type type,
|
||||
{
|
||||
for (y = 0; y < ny; y++)
|
||||
{
|
||||
ind[0] = VTX(0 , y , z );
|
||||
ind[1] = VTX(0 , y , z+1);
|
||||
ind[2] = VTX(0 , y+1, z+1);
|
||||
ind[3] = VTX(0 , y+1, z );
|
||||
ind[0] = VTX(0, y, z );
|
||||
ind[1] = VTX(0, y, z+1);
|
||||
ind[2] = VTX(0, y+1, z+1);
|
||||
ind[3] = VTX(0, y+1, z );
|
||||
if (type == Element::TETRAHEDRON)
|
||||
{
|
||||
AddBdrQuadAsTriangles(ind, 5);
|
||||
@@ -2971,10 +2971,10 @@ void Mesh::Make3D(int nx, int ny, int nz, Element::Type type,
|
||||
{
|
||||
for (y = 0; y < ny; y++)
|
||||
{
|
||||
ind[0] = VTX(nx, y , z );
|
||||
ind[0] = VTX(nx, y, z );
|
||||
ind[1] = VTX(nx, y+1, z );
|
||||
ind[2] = VTX(nx, y+1, z+1);
|
||||
ind[3] = VTX(nx, y , z+1);
|
||||
ind[3] = VTX(nx, y, z+1);
|
||||
if (type == Element::TETRAHEDRON)
|
||||
{
|
||||
AddBdrQuadAsTriangles(ind, 3);
|
||||
@@ -2990,10 +2990,10 @@ void Mesh::Make3D(int nx, int ny, int nz, Element::Type type,
|
||||
{
|
||||
for (z = 0; z < nz; z++)
|
||||
{
|
||||
ind[0] = VTX(x , 0, z );
|
||||
ind[0] = VTX(x, 0, z );
|
||||
ind[1] = VTX(x+1, 0, z );
|
||||
ind[2] = VTX(x+1, 0, z+1);
|
||||
ind[3] = VTX(x , 0, z+1);
|
||||
ind[3] = VTX(x, 0, z+1);
|
||||
if (type == Element::TETRAHEDRON)
|
||||
{
|
||||
AddBdrQuadAsTriangles(ind, 2);
|
||||
@@ -3009,8 +3009,8 @@ void Mesh::Make3D(int nx, int ny, int nz, Element::Type type,
|
||||
{
|
||||
for (z = 0; z < nz; z++)
|
||||
{
|
||||
ind[0] = VTX(x , ny, z );
|
||||
ind[1] = VTX(x , ny, z+1);
|
||||
ind[0] = VTX(x, ny, z );
|
||||
ind[1] = VTX(x, ny, z+1);
|
||||
ind[2] = VTX(x+1, ny, z+1);
|
||||
ind[3] = VTX(x+1, ny, z );
|
||||
if (type == Element::TETRAHEDRON)
|
||||
|
||||
+18
-43
@@ -1895,9 +1895,6 @@ void Mesh::ReadGmshMesh(std::istream &input, int &curved, int &read_gf)
|
||||
ho_wdg[2] = wdg18; ho_wdg[3] = wdg40;
|
||||
ho_pyr[2] = pyr14; ho_pyr[3] = pyr30;
|
||||
|
||||
bool has_nonpositive_phys_domain = false;
|
||||
bool has_positive_phys_domain = false;
|
||||
|
||||
if (binary)
|
||||
{
|
||||
int n_elem_part = 0; // partial sum of elements that are read
|
||||
@@ -1948,19 +1945,17 @@ void Mesh::ReadGmshMesh(std::istream &input, int &curved, int &read_gf)
|
||||
vert_indices[vi] = it->second;
|
||||
}
|
||||
|
||||
// Non-positive attributes are not allowed in MFEM. However,
|
||||
// by default, Gmsh sets the physical domain of all elements
|
||||
// to zero. In the case that all elements have physical domain
|
||||
// zero, we will given them attribute 1. If only some elements
|
||||
// have physical domain zero, we will throw an error.
|
||||
// non-positive attributes are not allowed in MFEM
|
||||
if (phys_domain <= 0)
|
||||
{
|
||||
has_nonpositive_phys_domain = true;
|
||||
phys_domain = 1;
|
||||
}
|
||||
else
|
||||
{
|
||||
has_positive_phys_domain = true;
|
||||
MFEM_ABORT("Non-positive element attribute in Gmsh mesh!\n"
|
||||
"By default Gmsh sets element tags (attributes)"
|
||||
" to '0' but MFEM requires that they be"
|
||||
" positive integers.\n"
|
||||
"Use \"Physical Curve\", \"Physical Surface\","
|
||||
" or \"Physical Volume\" to set tags/attributes"
|
||||
" for all curves, surfaces, or volumes in your"
|
||||
" Gmsh geometry to values which are >= 1.");
|
||||
}
|
||||
|
||||
// initialize the mesh element
|
||||
@@ -2177,19 +2172,17 @@ void Mesh::ReadGmshMesh(std::istream &input, int &curved, int &read_gf)
|
||||
vert_indices[vi] = it->second;
|
||||
}
|
||||
|
||||
// Non-positive attributes are not allowed in MFEM. However,
|
||||
// by default, Gmsh sets the physical domain of all elements
|
||||
// to zero. In the case that all elements have physical domain
|
||||
// zero, we will given them attribute 1. If only some elements
|
||||
// have physical domain zero, we will throw an error.
|
||||
// non-positive attributes are not allowed in MFEM
|
||||
if (phys_domain <= 0)
|
||||
{
|
||||
has_nonpositive_phys_domain = true;
|
||||
phys_domain = 1;
|
||||
}
|
||||
else
|
||||
{
|
||||
has_positive_phys_domain = true;
|
||||
MFEM_ABORT("Non-positive element attribute in Gmsh mesh!\n"
|
||||
"By default Gmsh sets element tags (attributes)"
|
||||
" to '0' but MFEM requires that they be"
|
||||
" positive integers.\n"
|
||||
"Use \"Physical Curve\", \"Physical Surface\","
|
||||
" or \"Physical Volume\" to set tags/attributes"
|
||||
" for all curves, surfaces, or volumes in your"
|
||||
" Gmsh geometry to values which are >= 1.");
|
||||
}
|
||||
|
||||
// initialize the mesh element
|
||||
@@ -2374,24 +2367,6 @@ void Mesh::ReadGmshMesh(std::istream &input, int &curved, int &read_gf)
|
||||
} // el (all elements)
|
||||
} // if ASCII
|
||||
|
||||
if (has_positive_phys_domain && has_nonpositive_phys_domain)
|
||||
{
|
||||
MFEM_ABORT("Non-positive element attribute in Gmsh mesh!\n"
|
||||
"By default Gmsh sets element tags (attributes)"
|
||||
" to '0' but MFEM requires that they be"
|
||||
" positive integers.\n"
|
||||
"Use \"Physical Curve\", \"Physical Surface\","
|
||||
" or \"Physical Volume\" to set tags/attributes"
|
||||
" for all curves, surfaces, or volumes in your"
|
||||
" Gmsh geometry to values which are >= 1.");
|
||||
}
|
||||
else if (has_nonpositive_phys_domain)
|
||||
{
|
||||
mfem::out << "\nGmsh reader: all element attributes were zero.\n"
|
||||
<< "MFEM only supports positive element attributes.\n"
|
||||
<< "Setting element attributes to 1.\n\n";
|
||||
}
|
||||
|
||||
if (!elements_3D.empty())
|
||||
{
|
||||
Dim = 3;
|
||||
|
||||
+1
-1
@@ -612,7 +612,7 @@ int NCMesh::NewSegment(int n0, int n1, int attr, int vattr1, int vattr2)
|
||||
// get (degenerate) faces and assign face attributes
|
||||
int v0 = el.node[0], v1 = el.node[1];
|
||||
faces.Get(v0, v0, v0, v0)->attribute = vattr1;
|
||||
faces.Get(v1, v1, v1 ,v1)->attribute = vattr2;
|
||||
faces.Get(v1, v1, v1,v1)->attribute = vattr2;
|
||||
|
||||
return new_id;
|
||||
}
|
||||
|
||||
@@ -1159,8 +1159,8 @@ static double u0(const Vector &x) { return sin(3.0 * PI * (x[1] + x[0])); }
|
||||
|
||||
enum {NORM, AREA};
|
||||
|
||||
static double qf(const int order, const int ker, Mesh &m,
|
||||
FiniteElementSpace &fes, GridFunction &u)
|
||||
double qf(const int order, const int ker, Mesh &m,
|
||||
FiniteElementSpace &fes, GridFunction &u)
|
||||
{
|
||||
const Geometry::Type type = m.GetElementBaseGeometry(0);
|
||||
const IntegrationRule &ir(IntRules.Get(type, order));
|
||||
|
||||
@@ -483,11 +483,11 @@ void ScreenedPoisson::AssembleElementVector(const FiniteElement &el,
|
||||
pval=shapef*elfun;
|
||||
if (fval>0.0)
|
||||
{
|
||||
elvect.Add( -w , shapef);
|
||||
elvect.Add( -w, shapef);
|
||||
}
|
||||
else if (fval<0.0)
|
||||
{
|
||||
elvect.Add( w , shapef);
|
||||
elvect.Add( w, shapef);
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -523,7 +523,7 @@ void ScreenedPoisson::AssembleElementGrad(const FiniteElement &el,
|
||||
el.CalcPhysDShape(trans, B);
|
||||
el.CalcPhysShape(trans,shapef);
|
||||
|
||||
AddMult_a_VVt(w , shapef, elmat);
|
||||
AddMult_a_VVt(w, shapef, elmat);
|
||||
AddMult_a_AAt(w * diffcoef, B, elmat);
|
||||
}
|
||||
}
|
||||
@@ -683,11 +683,11 @@ void PUMPLaplacian::AssembleElementVector(const FiniteElement &el,
|
||||
// add the external load -1 if tval > 0.0; 1 if tval < 0.0;
|
||||
if (tval>0.0)
|
||||
{
|
||||
elvect.Add( -w*fval , shapef);
|
||||
elvect.Add( -w*fval, shapef);
|
||||
}
|
||||
else if (tval<0.0)
|
||||
{
|
||||
elvect.Add( w*fval , shapef);
|
||||
elvect.Add( w*fval, shapef);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@@ -117,7 +117,7 @@ int main(int argc, char *argv[])
|
||||
MPI_Finalize();
|
||||
return 1;
|
||||
}
|
||||
if (prob >3 || prob <0) prob = 0; // default problem = H1
|
||||
if (prob >3 || prob <0) { prob = 0; } // default problem = H1
|
||||
if (prob == 3)
|
||||
{
|
||||
if (kappa < 0)
|
||||
@@ -221,7 +221,7 @@ int main(int argc, char *argv[])
|
||||
gradu = new VectorFunctionCoefficient(dim,gradu_exact);
|
||||
b.AddDomainIntegrator(new DomainLFIntegrator(*f));
|
||||
b.AddBdrFaceIntegrator(
|
||||
new DGDirichletLFIntegrator(*scalar_u, one, sigma, kappa));
|
||||
new DGDirichletLFIntegrator(*scalar_u, one, sigma, kappa));
|
||||
a.AddDomainIntegrator(new DiffusionIntegrator(one));
|
||||
a.AddInteriorFaceIntegrator(new DGDiffusionIntegrator(one, sigma, kappa));
|
||||
a.AddBdrFaceIntegrator(new DGDiffusionIntegrator(one, sigma, kappa));
|
||||
@@ -291,8 +291,8 @@ int main(int argc, char *argv[])
|
||||
|
||||
x = *X;
|
||||
JumpScaling js(1.0, jump_scaling_type == 2 ? JumpScaling::P_SQUARED_OVER_H
|
||||
: jump_scaling_type == 1 ? JumpScaling::ONE_OVER_H
|
||||
: JumpScaling::CONSTANT);
|
||||
: jump_scaling_type == 1 ? JumpScaling::ONE_OVER_H
|
||||
: JumpScaling::CONSTANT);
|
||||
switch (prob)
|
||||
{
|
||||
case 0: rates.AddH1GridFunction(&x,scalar_u,gradu); break;
|
||||
@@ -305,7 +305,7 @@ int main(int argc, char *argv[])
|
||||
delete B;
|
||||
delete A;
|
||||
|
||||
if (l==pr) break;
|
||||
if (l==pr) { break; }
|
||||
|
||||
pmesh->UniformRefinement();
|
||||
fespace->Update();
|
||||
|
||||
@@ -104,7 +104,7 @@ int main(int argc, char *argv[])
|
||||
args.PrintUsage(cout);
|
||||
return 1;
|
||||
}
|
||||
if (prob >3 || prob <0) prob = 0; // default problem = H1
|
||||
if (prob >3 || prob <0) { prob = 0; } // default problem = H1
|
||||
if (prob == 3)
|
||||
{
|
||||
if (kappa < 0)
|
||||
@@ -194,7 +194,7 @@ int main(int argc, char *argv[])
|
||||
gradu = new VectorFunctionCoefficient(dim,gradu_exact);
|
||||
b.AddDomainIntegrator(new DomainLFIntegrator(*f));
|
||||
b.AddBdrFaceIntegrator(
|
||||
new DGDirichletLFIntegrator(*scalar_u, one, sigma, kappa));
|
||||
new DGDirichletLFIntegrator(*scalar_u, one, sigma, kappa));
|
||||
a.AddDomainIntegrator(new DiffusionIntegrator(one));
|
||||
a.AddInteriorFaceIntegrator(new DGDiffusionIntegrator(one, sigma, kappa));
|
||||
a.AddBdrFaceIntegrator(new DGDiffusionIntegrator(one, sigma, kappa));
|
||||
@@ -224,8 +224,8 @@ int main(int argc, char *argv[])
|
||||
}
|
||||
|
||||
JumpScaling js(1.0, jump_scaling_type == 2 ? JumpScaling::P_SQUARED_OVER_H
|
||||
: jump_scaling_type == 1 ? JumpScaling::ONE_OVER_H
|
||||
: JumpScaling::CONSTANT);
|
||||
: jump_scaling_type == 1 ? JumpScaling::ONE_OVER_H
|
||||
: JumpScaling::CONSTANT);
|
||||
|
||||
switch (prob)
|
||||
{
|
||||
@@ -235,7 +235,7 @@ int main(int argc, char *argv[])
|
||||
case 3: rates.AddL2GridFunction(&x,scalar_u,gradu,&one,js); break;
|
||||
}
|
||||
|
||||
if (l==sr) break;
|
||||
if (l==sr) { break; }
|
||||
|
||||
mesh->UniformRefinement();
|
||||
fespace->Update();
|
||||
|
||||
@@ -98,7 +98,7 @@ TEST_CASE("DoF Transformation Classes",
|
||||
double uAv = A.InnerProduct(v, u);
|
||||
|
||||
REQUIRE(fabs(uAv - At.InnerProduct(vt, u )) < tol * fabs(uAv));
|
||||
REQUIRE(fabs(uAv - tA.InnerProduct(v , ut)) < tol * fabs(uAv));
|
||||
REQUIRE(fabs(uAv - tA.InnerProduct(v, ut)) < tol * fabs(uAv));
|
||||
REQUIRE(fabs(uAv - tAt.InnerProduct(vt, ut)) < tol * fabs(uAv));
|
||||
}
|
||||
SECTION("Inner product of a primal vector and a dual vector")
|
||||
@@ -119,7 +119,7 @@ TEST_CASE("DoF Transformation Classes",
|
||||
double fAv = A.InnerProduct(v, f);
|
||||
|
||||
REQUIRE(fabs(fAv - At.InnerProduct(vt, f )) < tol * fabs(fAv));
|
||||
REQUIRE(fabs(fAv - tA.InnerProduct(v , ft)) < tol * fabs(fAv));
|
||||
REQUIRE(fabs(fAv - tA.InnerProduct(v, ft)) < tol * fabs(fAv));
|
||||
REQUIRE(fabs(fAv - tAt.InnerProduct(vt, ft)) < tol * fabs(fAv));
|
||||
}
|
||||
}
|
||||
@@ -185,9 +185,9 @@ TEST_CASE("DoF Transformation Functions",
|
||||
|
||||
double fAv = A.InnerProduct(v, f);
|
||||
|
||||
REQUIRE(fabs(fAv - nAn.InnerProduct(v , f )) < tol * fabs(fAv));
|
||||
REQUIRE(fabs(fAv - nAn.InnerProduct(v, f )) < tol * fabs(fAv));
|
||||
REQUIRE(fabs(fAv - At.InnerProduct(vt, f )) < tol * fabs(fAv));
|
||||
REQUIRE(fabs(fAv - tA.InnerProduct(v , ft)) < tol * fabs(fAv));
|
||||
REQUIRE(fabs(fAv - tA.InnerProduct(v, ft)) < tol * fabs(fAv));
|
||||
REQUIRE(fabs(fAv - tAt.InnerProduct(vt, ft)) < tol * fabs(fAv));
|
||||
}
|
||||
SECTION("TransformDual")
|
||||
@@ -217,9 +217,9 @@ TEST_CASE("DoF Transformation Functions",
|
||||
|
||||
double uAv = A.InnerProduct(v, u);
|
||||
|
||||
REQUIRE(fabs(uAv - nAn.InnerProduct(v , u )) < tol * fabs(uAv));
|
||||
REQUIRE(fabs(uAv - nAn.InnerProduct(v, u )) < tol * fabs(uAv));
|
||||
REQUIRE(fabs(uAv - At.InnerProduct(vt, u )) < tol * fabs(uAv));
|
||||
REQUIRE(fabs(uAv - tA.InnerProduct(v , ut)) < tol * fabs(uAv));
|
||||
REQUIRE(fabs(uAv - tA.InnerProduct(v, ut)) < tol * fabs(uAv));
|
||||
REQUIRE(fabs(uAv - tAt.InnerProduct(vt, ut)) < tol * fabs(uAv));
|
||||
}
|
||||
}
|
||||
|
||||
Reference in New Issue
Block a user