Compare commits
536
Commits
gpu-maxwell
...
fixes
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|
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|
|
c4e4c21951 |
@@ -29,16 +29,12 @@ Runs a number of static repository-level sanity checks.
|
||||
|
||||
- `branch-history` guards against accidental commits of large files using the `--history` option of the `config/githooks/pre-push` script.
|
||||
|
||||
## `mfem-analysis.yml` (`build-analysis`)
|
||||
|
||||
Checks if the code builds and satisfies minimal requirements.
|
||||
|
||||
- `gitignore` builds hypre, METIS, and MFEM using `mfem/github-actions/build-hypre`, `mfem/github-actions/build-metis`, and `mfem/github-actions/build-mfem` and checks for correct `.gitignore` settings by running the `tests/scripts/gitignore` script.
|
||||
|
||||
## `builds-and-tests.yml`
|
||||
|
||||
Runs a matrix of builds and tests runs with different compilers, OS, mfem/hypre settings, etc. Also processes and upload Codecov reports.
|
||||
|
||||
One matrix job runs `tests/scripts/gitignore` after `make test-noclean` to check generated artifacts against `.gitignore`.
|
||||
|
||||
Uses the following GitHub Actions from <https://github.com/mfem/github-actions>:
|
||||
|
||||
- `mfem/github-actions/build-hypre`
|
||||
|
||||
@@ -111,6 +111,7 @@ jobs:
|
||||
build-system: make
|
||||
hypre-target: int64
|
||||
precision: fp64
|
||||
gitignore-check: YES
|
||||
- os: ubuntu-latest
|
||||
target: opt
|
||||
codecov: NO
|
||||
@@ -141,6 +142,10 @@ jobs:
|
||||
|
||||
continue-on-error: ${{ matrix.enzyme && true || false }}
|
||||
|
||||
# Enable ccache for all jobs except Windows (would need sccache).
|
||||
env:
|
||||
USE_CCACHE: ${{ matrix.os != 'windows-latest' }}
|
||||
|
||||
steps:
|
||||
# Fix 'No space left on device' errors for Ubuntu builds.
|
||||
- name: Run Actions Cleaner
|
||||
@@ -289,6 +294,52 @@ jobs:
|
||||
echo "OMPI_CC=$LLVM_PREFIX/bin/clang" >> $GITHUB_ENV
|
||||
echo "OMPI_CXX=$LLVM_PREFIX/bin/clang++" >> $GITHUB_ENV
|
||||
|
||||
# Restore the compiler cache (ccache). The key embeds the run id, so new
|
||||
# runs save a fresh snapshot; the restore-keys prefix warm-starts from the
|
||||
# most recent prior run (incl. the base branch for PRs).
|
||||
- name: cache ccache
|
||||
if: ${{ env.USE_CCACHE == 'true' }}
|
||||
uses: actions/cache@v5
|
||||
with:
|
||||
path: .ccache
|
||||
key: ccache-${{ matrix.os }}-${{ matrix.build-system }}-${{ matrix.target }}-${{ matrix.mpi }}-${{ matrix.hypre-target }}-${{ matrix.precision }}${{ matrix.enzyme && '-enzyme' || '' }}-${{ github.run_id }}
|
||||
restore-keys: |
|
||||
ccache-${{ matrix.os }}-${{ matrix.build-system }}-${{ matrix.target }}-${{ matrix.mpi }}-${{ matrix.hypre-target }}-${{ matrix.precision }}${{ matrix.enzyme && '-enzyme' || '' }}-
|
||||
|
||||
# Configure ccache and select how it is injected into the MFEM build:
|
||||
# - make: set CXX="ccache g++"; for MPI, OMPI_CXX="ccache g++" so mpicxx
|
||||
# runs ccache around g++ (not ccache around the mpicxx wrapper).
|
||||
# - cmake: set CMAKE_<LANG>_COMPILER_LAUNCHER=ccache.
|
||||
# - enzyme: wrap the brew clang++ via OMPI_CXX.
|
||||
# The chosen options are passed through build-mfem's 'config-options'
|
||||
# input (see the build step below).
|
||||
- name: configure ccache
|
||||
if: ${{ env.USE_CCACHE == 'true' }}
|
||||
run: |
|
||||
command -v ccache >/dev/null 2>&1 || {
|
||||
if [[ "${{ runner.os }}" == "Linux" ]]; then
|
||||
sudo apt-get update && sudo apt-get install -y ccache
|
||||
else
|
||||
brew install ccache
|
||||
fi
|
||||
}
|
||||
echo "CCACHE_DIR=${{ github.workspace }}/.ccache" >> $GITHUB_ENV
|
||||
echo "CCACHE_MAXSIZE=1G" >> $GITHUB_ENV
|
||||
echo "CCACHE_COMPILERCHECK=content" >> $GITHUB_ENV
|
||||
# Ignore header timestamps (restamped by each checkout) so direct mode hits.
|
||||
echo "CCACHE_SLOPPINESS=include_file_mtime,include_file_ctime,time_macros" >> $GITHUB_ENV
|
||||
# Hash absolute paths relative to the workspace.
|
||||
echo "CCACHE_BASEDIR=${{ github.workspace }}" >> $GITHUB_ENV
|
||||
if [[ "${{ matrix.enzyme }}" == "true" ]]; then
|
||||
echo "OMPI_CXX=ccache $LLVM_PREFIX/bin/clang++" >> $GITHUB_ENV
|
||||
elif [[ "${{ matrix.build-system }}" == "cmake" ]]; then
|
||||
echo 'CCACHE_CONFIG_OPTS=-DCMAKE_CXX_COMPILER_LAUNCHER=ccache -DCMAKE_C_COMPILER_LAUNCHER=ccache' >> $GITHUB_ENV
|
||||
else
|
||||
echo "OMPI_CXX=ccache g++" >> $GITHUB_ENV
|
||||
echo 'CCACHE_CONFIG_OPTS=CXX="ccache g++" MPICXX="mpicxx"' >> $GITHUB_ENV
|
||||
fi
|
||||
shell: bash
|
||||
|
||||
# MFEM build and test
|
||||
- name: build
|
||||
uses: mfem/github-actions/build-mfem@v2.7
|
||||
@@ -304,9 +355,14 @@ jobs:
|
||||
metis-dir: ${{ env.METIS_TOP_DIR }}
|
||||
mfem-dir: ${{ env.MFEM_TOP_DIR }}
|
||||
precision: ${{ matrix.precision }}
|
||||
config-options: ${{ matrix.config-opts }}
|
||||
config-options: ${{ matrix.config-opts }} ${{ env.CCACHE_CONFIG_OPTS }}
|
||||
library-only: ${{ matrix.target == 'dbg' && matrix.os != 'ubuntu-latest' }}
|
||||
|
||||
- name: ccache stats
|
||||
if: ${{ env.USE_CCACHE == 'true' }}
|
||||
run: ccache -s
|
||||
shell: bash
|
||||
|
||||
# Run checks (and only checks) on debug targets
|
||||
- name: checks
|
||||
if: matrix.build-system == 'make' && matrix.target == 'dbg'
|
||||
@@ -317,7 +373,13 @@ jobs:
|
||||
- name: tests
|
||||
if: matrix.build-system == 'make' && (matrix.target == 'opt' || matrix.os == 'ubuntu-latest')
|
||||
run: |
|
||||
cd ${{ env.MFEM_TOP_DIR }} && make test
|
||||
cd ${{ env.MFEM_TOP_DIR }}
|
||||
if [[ "${{ matrix.gitignore-check }}" == "YES" ]]; then
|
||||
make test-noclean
|
||||
else
|
||||
make test
|
||||
fi
|
||||
shell: bash
|
||||
|
||||
- name: cmake checks
|
||||
if: matrix.build-system == 'cmake' && matrix.target == 'dbg'
|
||||
@@ -369,3 +431,9 @@ jobs:
|
||||
directories: "fem general linalg mesh"
|
||||
env:
|
||||
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
|
||||
|
||||
- name: gitignore
|
||||
if: matrix.gitignore-check == 'YES'
|
||||
run: |
|
||||
cd ${{ env.MFEM_TOP_DIR }}/tests/scripts
|
||||
./runtest gitignore
|
||||
|
||||
@@ -0,0 +1,42 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
# This file is part of the MFEM library. For more information and source code
|
||||
# availability visit https://mfem.org.
|
||||
#
|
||||
# MFEM is free software; you can redistribute it and/or modify it under the
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
---
|
||||
# A closed PR's caches can never be restored again, so delete them to free
|
||||
# space against the 10 GB per-repo cache limit.
|
||||
name: Cleanup PR caches
|
||||
|
||||
on:
|
||||
pull_request:
|
||||
types: [closed]
|
||||
|
||||
permissions:
|
||||
actions: write
|
||||
|
||||
jobs:
|
||||
cleanup:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- name: Delete caches for the closed PR
|
||||
env:
|
||||
GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
|
||||
GH_REPO: ${{ github.repository }}
|
||||
PR_REF: refs/pull/${{ github.event.pull_request.number }}/merge
|
||||
run: |
|
||||
echo "Deleting caches for $PR_REF"
|
||||
while :; do
|
||||
ids=$(gh cache list --ref "$PR_REF" --limit 100 --json id --jq '.[].id')
|
||||
[ -n "$ids" ] || break
|
||||
echo "$ids" | while read -r id; do
|
||||
[ -n "$id" ] || continue
|
||||
echo "Deleting cache $id"
|
||||
gh cache delete "$id" || echo " (already gone)"
|
||||
done
|
||||
done
|
||||
@@ -14,9 +14,19 @@ name: "Static Analysis"
|
||||
on:
|
||||
push:
|
||||
branches: ["master", "next"]
|
||||
paths-ignore: &docs-only-paths
|
||||
- "**/*.md"
|
||||
- "doc/**"
|
||||
- ".binder/**"
|
||||
- "CITATION.cff"
|
||||
- "LICENSE"
|
||||
- "NOTICE"
|
||||
- "CHANGELOG"
|
||||
- "INSTALL"
|
||||
pull_request:
|
||||
# The branches below must be a subset of the branches above
|
||||
branches: ["master"]
|
||||
paths-ignore: *docs-only-paths
|
||||
|
||||
concurrency:
|
||||
group: ${{ github.workflow }}-${{ github.ref }}
|
||||
|
||||
@@ -1,102 +0,0 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
# This file is part of the MFEM library. For more information and source code
|
||||
# availability visit https://mfem.org.
|
||||
#
|
||||
# MFEM is free software; you can redistribute it and/or modify it under the
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
name: "Build Analysis"
|
||||
|
||||
permissions:
|
||||
actions: write
|
||||
|
||||
on:
|
||||
push:
|
||||
branches:
|
||||
- master
|
||||
- next
|
||||
pull_request:
|
||||
workflow_dispatch:
|
||||
|
||||
concurrency:
|
||||
group: ${{ github.workflow }}-${{ github.ref }}
|
||||
cancel-in-progress: true
|
||||
|
||||
env:
|
||||
HYPRE_ARCHIVE: v2.19.0.tar.gz
|
||||
HYPRE_TOP_DIR: hypre-2.19.0
|
||||
METIS_ARCHIVE: metis-4.0.3.tar.gz
|
||||
METIS_TOP_DIR: metis-4.0.3
|
||||
COVERAGE_ENV: mfem-coverage
|
||||
MFEM_ACTIONS_VERSION: v2.7
|
||||
|
||||
jobs:
|
||||
gitignore:
|
||||
runs-on: ubuntu-latest
|
||||
|
||||
steps:
|
||||
- name: checkout MFEM
|
||||
uses: actions/checkout@v6
|
||||
with:
|
||||
path: mfem
|
||||
|
||||
- name: Get MPI (Linux)
|
||||
run: |
|
||||
sudo apt-get install openmpi-bin libopenmpi-dev
|
||||
export OMPI_MCA_rmaps_base_oversubscribe=1
|
||||
|
||||
- name: Cache Hypre Install
|
||||
id: hypre-cache
|
||||
uses: actions/cache@v5
|
||||
with:
|
||||
path: ${{ env.HYPRE_TOP_DIR }}
|
||||
key: ${{ runner.os }}-ompi-build-${{ env.HYPRE_TOP_DIR }}-int32-fp64-${{ env.MFEM_ACTIONS_VERSION }}
|
||||
|
||||
- name: Get Hypre
|
||||
if: steps.hypre-cache.outputs.cache-hit != 'true'
|
||||
uses: mfem/github-actions/build-hypre@v2.7
|
||||
with:
|
||||
archive: ${{ env.HYPRE_ARCHIVE }}
|
||||
dir: ${{ env.HYPRE_TOP_DIR }}
|
||||
target: int32
|
||||
precision: fp64
|
||||
|
||||
- name: Cache Metis Install
|
||||
id: metis-cache
|
||||
uses: actions/cache@v5
|
||||
with:
|
||||
path: ${{ env.METIS_TOP_DIR }}
|
||||
key: ${{ runner.os }}-build-${{ env.METIS_TOP_DIR }}-${{ env.MFEM_ACTIONS_VERSION }}
|
||||
|
||||
- name: Install Metis
|
||||
if: steps.metis-cache.outputs.cache-hit != 'true'
|
||||
uses: mfem/github-actions/build-metis@v2.7
|
||||
with:
|
||||
archive: ${{ env.METIS_ARCHIVE }}
|
||||
dir: ${{ env.METIS_TOP_DIR }}
|
||||
|
||||
# MFEM build and test
|
||||
- name: build-mfem
|
||||
uses: mfem/github-actions/build-mfem@v2.7
|
||||
with:
|
||||
os: ${{ runner.os }}
|
||||
target: opt
|
||||
codecov: NO
|
||||
mpi: par
|
||||
build-system: make
|
||||
hypre-dir: ${{ env.HYPRE_TOP_DIR }}
|
||||
metis-dir: ${{ env.METIS_TOP_DIR }}
|
||||
mfem-dir: mfem
|
||||
|
||||
- name: test (no clean)
|
||||
run: |
|
||||
cd mfem && make test-noclean
|
||||
|
||||
- name: gitignore
|
||||
run: |
|
||||
cd mfem/tests/scripts
|
||||
./runtest gitignore
|
||||
@@ -13,6 +13,7 @@ name: "Checks"
|
||||
|
||||
permissions:
|
||||
actions: write
|
||||
pull-requests: read
|
||||
|
||||
on:
|
||||
push:
|
||||
@@ -29,6 +30,11 @@ concurrency:
|
||||
# by checking if the workflow trigger is 'push' ("github.event_name == 'push'")
|
||||
# and if we are in a fork ("github.event.pull_request.head.repo.full_name !=
|
||||
# github.repository").
|
||||
#
|
||||
# The logic for the branch-history check is slightly different, since that check
|
||||
# also inspects the PR's labels to allow for overriding failures. In this case,
|
||||
# we run on all 'pull_request' triggers, but only run for 'push' triggers that
|
||||
# do not correspond to any open PRs.
|
||||
|
||||
jobs:
|
||||
file-headers-check:
|
||||
@@ -128,10 +134,7 @@ jobs:
|
||||
|
||||
branch-history:
|
||||
if: |
|
||||
github.ref != 'refs/heads/next' &&
|
||||
github.ref != 'refs/heads/master' &&
|
||||
(github.event_name == 'push' ||
|
||||
github.event.pull_request.head.repo.full_name != github.repository)
|
||||
github.ref != 'refs/heads/next' && github.ref != 'refs/heads/master'
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- name: checkout mfem
|
||||
@@ -139,7 +142,27 @@ jobs:
|
||||
with:
|
||||
fetch-depth: 0
|
||||
|
||||
- name: check for pull request
|
||||
id: check_pr
|
||||
if: github.event_name == 'push'
|
||||
env:
|
||||
GH_TOKEN: ${{ github.token }}
|
||||
run: |
|
||||
pr_exists=$(gh pr list --repo "$GITHUB_REPOSITORY" \
|
||||
--head "$GITHUB_REF_NAME" \
|
||||
--state open \
|
||||
--json number \
|
||||
--jq 'length > 0')
|
||||
echo "pr_exists=$pr_exists" >> "$GITHUB_OUTPUT"
|
||||
|
||||
- name: branch-history
|
||||
id: branch_history
|
||||
if: |
|
||||
(github.event_name == 'pull_request' ||
|
||||
github.event_name == 'workflow_dispatch' ||
|
||||
steps.check_pr.outputs.pr_exists == 'false')
|
||||
continue-on-error: ${{ contains(github.event.pull_request.labels.*.name,
|
||||
'branch-history-override') }}
|
||||
run: |
|
||||
# We override origin to make sure we point to the main repo.
|
||||
# This is to have consistent test results on PRs from forks.
|
||||
@@ -147,3 +170,9 @@ jobs:
|
||||
git remote add origin https://github.com/mfem/mfem.git
|
||||
git checkout -b gh-actions-branch-history
|
||||
./config/githooks/pre-push --history
|
||||
|
||||
- name: report branch-history override
|
||||
if: steps.branch_history.outcome == 'failure'
|
||||
run: |
|
||||
echo "::warning::branch-history check failed, but the" \
|
||||
"'branch-history-override' label is set."
|
||||
|
||||
@@ -17,7 +17,17 @@ permissions:
|
||||
on:
|
||||
push:
|
||||
branches: ["master", "next"]
|
||||
paths-ignore: &docs-only-paths
|
||||
- "**/*.md"
|
||||
- "doc/**"
|
||||
- ".binder/**"
|
||||
- "CITATION.cff"
|
||||
- "LICENSE"
|
||||
- "NOTICE"
|
||||
- "CHANGELOG"
|
||||
- "INSTALL"
|
||||
pull_request:
|
||||
paths-ignore: *docs-only-paths
|
||||
workflow_dispatch:
|
||||
|
||||
concurrency:
|
||||
|
||||
@@ -260,6 +260,7 @@ miniapps/meshing/polar-nc
|
||||
miniapps/meshing/mesh-quality
|
||||
miniapps/meshing/hpref
|
||||
miniapps/meshing/phpref
|
||||
miniapps/meshing/pref321
|
||||
miniapps/meshing/mobius-strip.mesh
|
||||
miniapps/meshing/klein-bottle.mesh
|
||||
miniapps/meshing/toroid-*.mesh
|
||||
|
||||
@@ -102,12 +102,14 @@ report_baseline:
|
||||
mkdir -p ${MACHINE_NAME}
|
||||
rundir="${MACHINE_NAME}/$(date +%Y-%m-%d)-gitlab-${BASELINE_TEST}-${CI_COMMIT_REF_SLUG}"
|
||||
rundir=$(${CI_PROJECT_DIR}/.gitlab/scripts/safe_create_rundir ${rundir})
|
||||
cp ${CI_PROJECT_DIR}/${ARTIFACTS_DIR}/* ${rundir}
|
||||
status=0
|
||||
cp ${CI_PROJECT_DIR}/${ARTIFACTS_DIR}/* ${rundir} || { status=1; }
|
||||
printf "%s\n" "" "Pipeline URL:" "$CI_PIPELINE_URL" \
|
||||
>> ${rundir}/pipeline.txt
|
||||
# We create an autotest-email.html file, because that's how we signal
|
||||
# that there was an error / diff (temporary).
|
||||
if [[ -f ${rundir}/${BASELINE_TEST}.err ]] || \
|
||||
if [[ $status -ne 0 ]] || \
|
||||
[[ -f ${rundir}/${BASELINE_TEST}.err ]] || \
|
||||
[[ -f ${rundir}/${BASELINE_TEST}-${MACHINE_NAME}.diff ]]; then
|
||||
cp ${rundir}/pipeline.txt ${rundir}/autotest-email.html
|
||||
fi
|
||||
|
||||
@@ -15,6 +15,10 @@ Version 4.9.1 (development)
|
||||
|
||||
Discretization improvements
|
||||
---------------------------
|
||||
- Improved FindPointsGSLIB surface mesh capability with support for simplices
|
||||
and an option to specify axis-aligned bounding box padding for near-surface
|
||||
point queries.
|
||||
|
||||
- Added GPU-enabled partial assembly for simplicial Bernstein H1 basis based on
|
||||
ragged tensor algorithms (see DOI: 10.1137/11082539X) for mass and diffusion
|
||||
integrators.
|
||||
@@ -42,8 +46,19 @@ Discretization improvements
|
||||
|
||||
- Extend FindPointsGSLIB to support surface meshes.
|
||||
|
||||
- Added support for complex-valued mixed bilinear forms via the new classes
|
||||
MixedSesquilinearForm and ParMixedSesquilinearForm, mirroring the existing
|
||||
SesquilinearForm classes. Rectangular complex operators are now also
|
||||
handled correctly by ComplexSparseMatrix::GetSystemMatrix and
|
||||
ComplexHypreParMatrix::GetSystemMatrix, which previously assumed equal
|
||||
trial and test spaces.
|
||||
|
||||
Meshing improvements
|
||||
--------------------
|
||||
- Added support for nonuniform anisotropic mesh refinement on parallel quad/hex
|
||||
meshes with arbitrary spacing in each direction. This enables in particular
|
||||
3:1 refinement in parallel, as demonstrated in the new meshing miniapp pref321.
|
||||
|
||||
- Added option to guarantee mesh validity during TMOP-based r-adaptivity, using
|
||||
bounds on the determinant of the mesh transformation Jacobian.
|
||||
|
||||
@@ -64,18 +79,53 @@ Linear and nonlinear solvers
|
||||
PRefinement multigrid methods for problems posed on trace spaces (see e.g. the
|
||||
DPG miniapps).
|
||||
|
||||
- Added new class MultiVector: an array of Vectors of different sizes where each
|
||||
Vector can be allocated independently. Also, added associated methods in class
|
||||
Operator: MultMV, MultTransposeMV, and GetGradientMV, that use MultiVector
|
||||
objects for input and/or output parameters. [PR #5249]
|
||||
|
||||
GPU computing
|
||||
-------------
|
||||
- Improved partial assembly for VectorDivergenceIntegrator with shared-memory
|
||||
kernels, kernel registration, and transpose support.
|
||||
|
||||
- Improved partial-assembly diagonal kernels for VectorMassIntegrator (shared-
|
||||
memory specializations) and ElasticityIntegrator (no scratch Q-vector).
|
||||
|
||||
- Added PA gradient and diagonal support for VectorConvectionNLFIntegrator
|
||||
(AssembleGradPA, AddMultGradPA, AssembleGradDiagonalPA).
|
||||
|
||||
- Added device assembly support for 3D H(curl) VectorFEDomainLFIntegrator.
|
||||
|
||||
- Added partial assembly support for MixedScalarWeakGradientIntegrator.
|
||||
|
||||
- Added partial assembly support for MixedDotProductIntegrator.
|
||||
|
||||
- Added partial assembly support for MixedScalarCrossProductIntegrator.
|
||||
|
||||
- Added partial assembly support for MixedScalarWeakCrossProductIntegrator.
|
||||
|
||||
- Added support for device partial assembly CurlInterpolator.
|
||||
This supports 2D and 3D variants:
|
||||
2D H1 (out-of-plane) to RT (in-plane)
|
||||
2D ND (in-plane) to Integral L2 (out-of-plane)
|
||||
3D ND to RT
|
||||
|
||||
- Added NVIDIA cuDSS library interface. Implementation examples have been
|
||||
added to ex1 and ex1p. See https://developer.nvidia.com/cudss for more
|
||||
details. Supported versions >= 0.6.0.
|
||||
|
||||
- Allow specifying GPU kernel launch bounds for native and RAJA GPU backends.
|
||||
|
||||
- Changed VectorFEMassIntegrator to use kernel specialization dispatch for
|
||||
partial assembly.
|
||||
|
||||
- Added support for FiniteElement::MapType::INTEGRAL spaces to
|
||||
QuadratureInterpolator.
|
||||
|
||||
- Added support for FiniteElement::MapType::INTEGRAL spaces to
|
||||
MixedScalarCurlIntegrator.
|
||||
|
||||
New and updated examples and miniapps
|
||||
-------------------------------------
|
||||
- The Lorentz miniapp (in miniapps/electromagnetics) has been updated to
|
||||
@@ -90,6 +140,12 @@ Miscellaneous
|
||||
using the new method ApplyDofSigns() in class ParFiniteElementSpace: the
|
||||
method will return immediately if no sign flips are needed.
|
||||
|
||||
API changes
|
||||
-----------
|
||||
- Removed ProjectGrad from 2D RT elements. Users should use ProjectCurl instead.
|
||||
This also fixes a bug where ProjectCurl was returning the negative curl,
|
||||
identical to ProjectGrad.
|
||||
|
||||
|
||||
Version 4.9, released on Dec 11, 2025
|
||||
=====================================
|
||||
|
||||
+10
-12
@@ -88,18 +88,9 @@ if (MFEM_USE_STRUMPACK OR MFEM_USE_MUMPS)
|
||||
# Just needed to find the MPI_Fortran libraries to link with
|
||||
set(XSDK_ENABLE_Fortran ON)
|
||||
endif()
|
||||
# Ginkgo requires C++17:
|
||||
if ((MFEM_USE_GINKGO) AND ("${CMAKE_CXX_STANDARD}" LESS "17"))
|
||||
set(CMAKE_CXX_STANDARD 17 CACHE STRING "C++ standard to use." FORCE)
|
||||
# Google Benchmark, SUNDIALS, STRUMPACK, Tribol, RAJA and Umpire require C++14:
|
||||
elseif ((MFEM_USE_BENCHMARK OR
|
||||
MFEM_USE_SUNDIALS OR
|
||||
MFEM_USE_STRUMPACK OR
|
||||
MFEM_USE_TRIBOL OR
|
||||
MFEM_USE_RAJA OR
|
||||
MFEM_USE_UMPIRE) AND
|
||||
("${CMAKE_CXX_STANDARD}" LESS "14"))
|
||||
set(CMAKE_CXX_STANDARD 14 CACHE STRING "C++ standard to use." FORCE)
|
||||
# RAJA requires C++20:
|
||||
if ((MFEM_USE_UMPIRE OR MFEM_USE_RAJA) AND ("${CMAKE_CXX_STANDARD}" LESS "20"))
|
||||
set(CMAKE_CXX_STANDARD 20 CACHE STRING "C++ standard to use." FORCE)
|
||||
endif()
|
||||
|
||||
# Include xSDK default CMake file.
|
||||
@@ -239,6 +230,13 @@ else()
|
||||
set(MFEM_DEBUG OFF)
|
||||
endif()
|
||||
|
||||
# Shadow warnings for clang only; GCC's -Wshadow flags more.
|
||||
if (CMAKE_CXX_COMPILER_ID MATCHES "Clang")
|
||||
set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -pedantic -Wall -Wshadow")
|
||||
elseif (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
|
||||
set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -pedantic -Wall")
|
||||
endif()
|
||||
|
||||
# Shared build on Windows
|
||||
if (WIN32 AND BUILD_SHARED_LIBS)
|
||||
# CMAKE_WINDOWS_EXPORT_ALL_SYMBOLS works only with MSVC?
|
||||
|
||||
@@ -6,7 +6,6 @@
|
||||
<a href="https://github.com/mfem/mfem/blob/master/LICENSE"><img alt="License" src="https://img.shields.io/badge/License-BSD-blue.svg"></a>
|
||||
<a href="https://github.com/mfem/mfem/releases/latest"><img alt="GitHub release" src="https://img.shields.io/github/v/release/mfem/mfem"></a>
|
||||
<a href="https://github.com/mfem/mfem/actions/workflows/repo-check.yml?query=branch%3Amaster"><img alt="Repo check" src="https://github.com/mfem/mfem/actions/workflows/repo-check.yml/badge.svg?branch=master"></a>
|
||||
<a href="https://github.com/mfem/mfem/actions/workflows/mfem-analysis.yml?query=branch%3Amaster"><img alt="Build Analysis" src="https://github.com/mfem/mfem/actions/workflows/mfem-analysis.yml/badge.svg?branch=master"></a>
|
||||
<a href="https://github.com/mfem/mfem/actions/workflows/builds-and-tests.yml?query=branch%3Amaster"><img alt="Builds and Tests" src="https://github.com/mfem/mfem/actions/workflows/builds-and-tests.yml/badge.svg?branch=master"></a>
|
||||
<a href="https://ci.appveyor.com/project/mfem/mfem"><img alt="Build Status" src="https://ci.appveyor.com/api/projects/status/19non9sqm6msi2wy?svg=true"></a>
|
||||
<a href="https://docs.mfem.org/html/index.html"><img alt="Documentation" src="https://img.shields.io/badge/code-documented-brightgreen.svg"></a>
|
||||
|
||||
@@ -22,15 +22,15 @@ include(MfemCmakeUtilities)
|
||||
mfem_find_package(SuiteSparse SuiteSparse SuiteSparse_DIR "" "" "" ""
|
||||
"Paths to headers required by SuiteSparse."
|
||||
"Libraries required by SuiteSparse."
|
||||
ADD_COMPONENT "UMFPACK" "include;suitesparse" umfpack.h "lib" umfpack
|
||||
ADD_COMPONENT "KLU" "include;suitesparse" klu.h "lib" klu
|
||||
ADD_COMPONENT "AMD" "include;suitesparse" amd.h "lib" amd
|
||||
ADD_COMPONENT "BTF" "include;suitesparse" btf.h "lib" btf
|
||||
ADD_COMPONENT "CHOLMOD" "include;suitesparse" cholmod.h "lib" cholmod
|
||||
ADD_COMPONENT "COLAMD" "include;suitesparse" colamd.h "lib" colamd
|
||||
ADD_COMPONENT "CAMD" "include;suitesparse" camd.h "lib" camd
|
||||
ADD_COMPONENT "CCOLAMD" "include;suitesparse" ccolamd.h "lib" ccolamd
|
||||
ADD_COMPONENT "config" "include;suitesparse" SuiteSparse_config.h "lib"
|
||||
ADD_COMPONENT "UMFPACK" "include;include/suitesparse;suitesparse" umfpack.h "lib" umfpack
|
||||
ADD_COMPONENT "KLU" "include;include/suitesparse;suitesparse" klu.h "lib" klu
|
||||
ADD_COMPONENT "AMD" "include;include/suitesparse;suitesparse" amd.h "lib" amd
|
||||
ADD_COMPONENT "BTF" "include;include/suitesparse;suitesparse" btf.h "lib" btf
|
||||
ADD_COMPONENT "CHOLMOD" "include;include/suitesparse;suitesparse" cholmod.h "lib" cholmod
|
||||
ADD_COMPONENT "COLAMD" "include;include/suitesparse;suitesparse" colamd.h "lib" colamd
|
||||
ADD_COMPONENT "CAMD" "include;include/suitesparse;suitesparse" camd.h "lib" camd
|
||||
ADD_COMPONENT "CCOLAMD" "include;include/suitesparse;suitesparse" ccolamd.h "lib" ccolamd
|
||||
ADD_COMPONENT "config" "include;include/suitesparse;suitesparse" SuiteSparse_config.h "lib"
|
||||
suitesparseconfig)
|
||||
|
||||
if (SuiteSparse_FOUND AND METIS_VERSION_5)
|
||||
|
||||
+35
-4
@@ -27,7 +27,10 @@ MPICXX = mpicxx
|
||||
|
||||
BASE_FLAGS = -std=c++17
|
||||
OPTIM_FLAGS = -O3 $(BASE_FLAGS)
|
||||
DEBUG_FLAGS = -g $(XCOMPILER)-Wall $(BASE_FLAGS)
|
||||
|
||||
# The variable WARNING_FLAGS depends on which compiler is used, and is defined
|
||||
# later in this file.
|
||||
DEBUG_FLAGS = $(strip -g $(addprefix $(XCOMPILER),$(WARNING_FLAGS)) $(BASE_FLAGS))
|
||||
|
||||
# Prefixes for passing flags to the compiler and linker when using CXX or MPICXX
|
||||
CXX_XCOMPILER =
|
||||
@@ -46,6 +49,10 @@ SHARED = NO
|
||||
#
|
||||
# If you set MFEM_USE_ENZYME=YES, must use CUDA_CXX=clang++
|
||||
CUDA_CXX = nvcc
|
||||
# CUDA compute capability used during compilation, e.g. sm_60. Multiple
|
||||
# architectures can be requested as a comma-separated list, e.g. sm_70,sm_80.
|
||||
# A single value may also be one of the nvcc special values "all",
|
||||
# "all-major", or "native".
|
||||
CUDA_ARCH = sm_60
|
||||
# Base CUDA install directory, only needed if building with clang+cuda:
|
||||
# The default setting is:
|
||||
@@ -54,11 +61,23 @@ CUDA_ARCH = sm_60
|
||||
# 3. Use /usr/local/cuda
|
||||
CUDA_DIR = $(or $(CUDA_HOME),$(patsubst %/,%,$(dir \
|
||||
$(patsubst %/,%,$(dir $(shell command -v nvcc))))),/usr/local/cuda)
|
||||
# Derive nvcc/clang architecture flags from CUDA_ARCH. A comma-separated list
|
||||
# expands into one -gencode / --cuda-gpu-arch flag per architecture; otherwise
|
||||
# use the -arch / --cuda-gpu-arch shorthand.
|
||||
MFEM_COMMA := ,
|
||||
CUDA_ARCH_NUMS = $(patsubst sm_%,%,$(subst $(MFEM_COMMA), ,$(CUDA_ARCH)))
|
||||
NVCC_ARCH_FLAGS = $(strip $(if $(findstring $(MFEM_COMMA),$(CUDA_ARCH)),\
|
||||
$(foreach arch,$(CUDA_ARCH_NUMS),\
|
||||
-gencode arch=compute_$(arch)$(MFEM_COMMA)code=sm_$(arch)),\
|
||||
-arch=$(CUDA_ARCH)))
|
||||
CLANG_ARCH_FLAGS = $(strip $(if $(findstring $(MFEM_COMMA),$(CUDA_ARCH)),\
|
||||
$(foreach arch,$(CUDA_ARCH_NUMS),--cuda-gpu-arch=sm_$(arch)),\
|
||||
--cuda-gpu-arch=$(CUDA_ARCH)))
|
||||
# flags for clang+cuda
|
||||
CLANG_CUDA_FLAGS = -xcuda --cuda-path=$(CUDA_DIR) --cuda-gpu-arch=$(CUDA_ARCH)
|
||||
CLANG_CUDA_FLAGS = -xcuda --cuda-path=$(CUDA_DIR) $(CLANG_ARCH_FLAGS)
|
||||
# flags for nvcc
|
||||
NVCC_FLAGS = -x=cu --expt-extended-lambda --expt-relaxed-constexpr \
|
||||
-arch=$(CUDA_ARCH) -isystem "$(CUDA_DIR)/include"
|
||||
$(NVCC_ARCH_FLAGS) -isystem "$(CUDA_DIR)/include"
|
||||
# Prefixes for passing flags to the host compiler and linker when using
|
||||
# CUDA_CXX=nvcc
|
||||
CUDA_XCOMPILER = -Xcompiler=
|
||||
@@ -376,7 +395,7 @@ CUDSS_LIBRARY_DIR = $(CUDSS_DIR)/lib
|
||||
CUDSS_OPT = -I$(CUDSS_INCLUDE_DIR)
|
||||
CUDSS_LIB = \
|
||||
$(XLINKER)-rpath,$(CUDSS_LIBRARY_DIR) -L$(CUDSS_LIBRARY_DIR) -lcudss
|
||||
# The cuDSS communication and threading libraries.
|
||||
# The cuDSS communication and threading libraries.
|
||||
MFEM_CUDSS_COMM_LIB = $(abspath $(wildcard $(or $(CUDSS_COMM_LIB),\
|
||||
$(subst @MFEM_DIR@,$(MFEM_DIR), $(CUDSS_LIBRARY_DIR)/libcudss_commlayer_openmpi.so))))
|
||||
MFEM_CUDSS_THREADING_LIB = $(abspath $(wildcard $(or $(CUDSS_THREADING_LIB),\
|
||||
@@ -659,3 +678,15 @@ VERBOSE = NO
|
||||
|
||||
# Optional build tag
|
||||
MFEM_BUILD_TAG = $(shell uname -snm)
|
||||
|
||||
# Enable -pedantic flag only for gcc or clang. nvcc complains with -pedantic
|
||||
# because of line directives.
|
||||
PEDANTIC_FLAG = $(if \
|
||||
$(findstring NVIDIA,$(shell $(MFEM_CXX) --version 2>&1)),, \
|
||||
$(if $(or \
|
||||
$(findstring gcc version,$(shell $(MFEM_CXX) -v 2>&1)), \
|
||||
$(findstring clang version,$(shell $(MFEM_CXX) -v 2>&1))),-pedantic,))
|
||||
# Enable shadow warnings for clang only; GCC's -Wshadow flags more.
|
||||
SHADOW_WARNING_FLAG = $(if $(findstring clang,\
|
||||
$(shell $(MFEM_HOST_CXX) --version 2>/dev/null)),-Wshadow,)
|
||||
WARNING_FLAGS = $(PEDANTIC_FLAG) -Wall $(SHADOW_WARNING_FLAG)
|
||||
|
||||
@@ -39,3 +39,8 @@ when a picture was added for documentation.
|
||||
If that is the case, make sure the failure is indeed justified, and rerun the
|
||||
push command with the `--no-verify` option. This will skip the hooks, allowing
|
||||
you to push those changes.
|
||||
|
||||
The `branch-history` check is run automatically through GitHub Actions. If a
|
||||
branch is known to have a large number of changes that are legitimate, the
|
||||
check can be overridden by setting the label 'branch-history-override' on the
|
||||
pull request.
|
||||
|
||||
@@ -0,0 +1,38 @@
|
||||
MFEM mesh v1.0
|
||||
|
||||
#
|
||||
# MFEM Geometry Types (see fem/geom.hpp):
|
||||
#
|
||||
# POINT = 0
|
||||
# SEGMENT = 1
|
||||
# TRIANGLE = 2
|
||||
# SQUARE = 3
|
||||
# TETRAHEDRON = 4
|
||||
# CUBE = 5
|
||||
# PRISM = 6
|
||||
# PYRAMID = 7
|
||||
|
||||
dimension
|
||||
2
|
||||
|
||||
elements
|
||||
2
|
||||
1 3 0 1 4 3
|
||||
1 2 1 2 4
|
||||
|
||||
boundary
|
||||
5
|
||||
1 1 0 1
|
||||
1 1 1 2
|
||||
1 1 2 4
|
||||
1 1 4 3
|
||||
1 1 3 0
|
||||
|
||||
vertices
|
||||
5
|
||||
2
|
||||
0 0
|
||||
1 0
|
||||
2 0
|
||||
0 1
|
||||
1 1
|
||||
@@ -1083,7 +1083,8 @@ EXCLUDE_PATTERNS =
|
||||
# ANamespace::AClass, ANamespace::*Test
|
||||
|
||||
EXCLUDE_SYMBOLS = mfem::internal \
|
||||
mfem::kernels::internal
|
||||
mfem::kernels::internal \
|
||||
mfem::future::detail
|
||||
|
||||
# The EXAMPLE_PATH tag can be used to specify one or more files or directories
|
||||
# that contain example code fragments that are included (see the \include
|
||||
|
||||
@@ -201,6 +201,7 @@ namespace mfem {
|
||||
* - <a class="el" href="nurbs__naca__cmesh_8cpp_source.html">NURBS NACA Mesher</a>: generate NURBS based mesh around a NACA foil
|
||||
* - <a class="el" href="nurbs__printfunc_8cpp_source.html">NURBS Printer</a>: print the NURBS-basis
|
||||
* - <a class="el" href="nurbs__mesh_info_8cpp_source.html">NURBS Mesh info</a>: print the info of a NURBS mesh
|
||||
* - <a class="el" href="nurbs__surface_8cpp_source.html">NURBS Surface</a>: interpolate a 3D Surface in a NURBS Patch
|
||||
*
|
||||
* <H3>Miniapps</H3>
|
||||
* - <a class="el" href="volta_8cpp_source.html">Volta</a>: simple electrostatics simulation code
|
||||
@@ -245,6 +246,9 @@ namespace mfem {
|
||||
* - <a class="el" href="pdiffusion_8cpp_source.html">DPG Diffusion example</a>: DPG formulation for the diffusion problem
|
||||
* - <a class="el" href="pmaxwell_8cpp_source.html">DPG Maxwell example</a>: DPG formulation for the indefinite Maxwell problem
|
||||
* - <a class="el" href="lor__elast_8cpp_source.html">LOR Elasticity</a>: solve linear elasticity with LOR preconditioning on GPUs
|
||||
* - <a class="el" href="reflector_8cpp_source.html">Reflector Miniapp</a>: reflect a mesh about a plane
|
||||
* - <a class="el" href="ref321_8cpp_source.html">3:1 Refinement Miniapp</a>: perform 3:1 anisotropic mesh refinements
|
||||
* - <a class="el" href="pref321_8cpp_source.html">3:1 Refinement Miniapp</a>: parallel 3:1 anisotropic mesh refinements
|
||||
*
|
||||
* See also the <a class="el" href="https://mfem.org/examples/">examples documentation</a> online.
|
||||
*/
|
||||
|
||||
+8
-1
@@ -57,6 +57,8 @@ set(SRCS
|
||||
integ/lininteg_domain_grad.cpp
|
||||
integ/lininteg_domain_vectorfe.cpp
|
||||
integ/nonlininteg_vecconvection_pa.cpp
|
||||
integ/nonlininteg_vecconvection_pa_diag.cpp
|
||||
integ/nonlininteg_vecconvection_pa_grad.cpp
|
||||
integ/nonlininteg_vecconvection_mf.cpp
|
||||
coefficient.cpp
|
||||
complex_fem.cpp
|
||||
@@ -133,7 +135,7 @@ set(SRCS
|
||||
tmop/assemble/diag2.cpp
|
||||
tmop/assemble/grad2_limit.cpp
|
||||
tmop/assemble/grad2.cpp
|
||||
tmop/assemble/diag3_limit.cpp
|
||||
tmop/assemble/diag3_limit.cpp
|
||||
tmop/assemble/diag3.cpp
|
||||
tmop/assemble/grad3_limit.cpp
|
||||
tmop/assemble/grad3.cpp
|
||||
@@ -204,7 +206,11 @@ set(HDRS
|
||||
integ/bilininteg_mass_kernels.hpp
|
||||
integ/bilininteg_mass_pa_simplices.hpp
|
||||
integ/bilininteg_vecdiffusion_pa.hpp
|
||||
integ/bilininteg_vecdiv_pa.hpp
|
||||
integ/bilininteg_vecmass_pa.hpp
|
||||
integ/nonlininteg_vecconvection_pa.hpp
|
||||
integ/nonlininteg_vecconvection_pa_diag.hpp
|
||||
integ/nonlininteg_vecconvection_pa_grad.hpp
|
||||
coefficient.hpp
|
||||
complex_fem.hpp
|
||||
convergence.hpp
|
||||
@@ -311,6 +317,7 @@ set(HDRS
|
||||
tmop_tools.hpp
|
||||
tmop_amr.hpp
|
||||
gslib.hpp
|
||||
gslib/gslib_kernel_helpers.hpp
|
||||
transfer.hpp
|
||||
hyperbolic.hpp
|
||||
integrator.hpp
|
||||
|
||||
@@ -1997,7 +1997,11 @@ void PADiscreteLinearOperatorExtension::Assemble()
|
||||
}
|
||||
else
|
||||
{
|
||||
mfem_error("A real ElementRestriction is required in this setting!");
|
||||
const L2ElementRestriction* l2_elem_restrict =
|
||||
dynamic_cast<const L2ElementRestriction*>(elem_restrict_test);
|
||||
MFEM_VERIFY(l2_elem_restrict,
|
||||
"A real ElementRestriction is required in this setting!");
|
||||
test_multiplicity = 1.0;
|
||||
}
|
||||
|
||||
auto tm = test_multiplicity.ReadWrite();
|
||||
@@ -2036,7 +2040,13 @@ void PADiscreteLinearOperatorExtension::AddMult(
|
||||
}
|
||||
else
|
||||
{
|
||||
mfem_error("In this setting you need a real ElementRestriction!");
|
||||
const L2ElementRestriction* l2_elem_restrict =
|
||||
dynamic_cast<const L2ElementRestriction*>(elem_restrict_test);
|
||||
MFEM_VERIFY(l2_elem_restrict,
|
||||
"In this setting you need a real ElementRestriction!");
|
||||
tempY.SetSize(y.Size());
|
||||
l2_elem_restrict->MultTranspose(localTest, tempY);
|
||||
y += tempY;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
+410
-326
File diff suppressed because it is too large
Load Diff
+1036
-138
File diff suppressed because it is too large
Load Diff
@@ -166,6 +166,75 @@ public:
|
||||
return sqrt(err_r * err_r + err_i * err_i);
|
||||
}
|
||||
|
||||
/// @brief Returns Max|u_ex - u_h| error for complex-valued H1 or L2 elements
|
||||
///
|
||||
/// Compute the $L_\infty$ error across the entire domain.
|
||||
///
|
||||
/// @param[in] exsolr Coefficient object reproducing the real part of the
|
||||
/// anticipated values of the scalar field, Re(u_ex).
|
||||
/// @param[in] exsoli Coefficient object reproducing the imaginary part of
|
||||
/// the anticipated values of the scalar field, Im(u_ex).
|
||||
/// @param[in] irs Optional pointer to an array of custom integration
|
||||
/// rules e.g. higher order than the default rules. If
|
||||
/// present the array will be indexed by
|
||||
/// Geometry::Type.
|
||||
///
|
||||
/// @note Uses ComputeLpError internally. See the ComputeLpError
|
||||
/// documentation for generalizations of this error computation.
|
||||
///
|
||||
/// @note If an array of integration rules is provided through @a irs, be
|
||||
/// sure to include valid rules for each element type that may occur
|
||||
/// in the list of elements.
|
||||
///
|
||||
virtual real_t ComputeMaxError(Coefficient &exsolr,
|
||||
Coefficient &exsoli,
|
||||
const IntegrationRule *irs[] = NULL) const
|
||||
{
|
||||
return ComputeLpError(infinity(), exsolr, exsoli, NULL, irs);
|
||||
}
|
||||
|
||||
/// @brief Returns ||u_ex - u_h||_Lp for complex-valued H1 or L2 elements
|
||||
///
|
||||
/// Computes:
|
||||
/// $$(\sum_{elems} \int_{elem} w \, |u_{ex} - u_h|^p)^{1/p}$$
|
||||
/// Where:
|
||||
/// $$|u_{ex} - u_h| = \sqrt{Re(u_{ex} - u_h)^2 + Im(u_{ex} - u_h)^2}$$
|
||||
///
|
||||
/// @param[in] p Real value indicating the exponent of the $L^p$ norm.
|
||||
/// To avoid domain errors p should have a positive value,
|
||||
/// either finite or infinite.
|
||||
/// @param[in] exsolr Coefficient object reproducing the real part of the
|
||||
/// anticipated values of the scalar field, Re(u_ex).
|
||||
/// @param[in] exsoli Coefficient object reproducing the imaginary part of
|
||||
/// the anticipated values of the scalar field, Im(u_ex).
|
||||
/// @param[in] weight Optional pointer to a Coefficient object reproducing
|
||||
/// a weighting function, w.
|
||||
/// @param[in] irs Optional pointer to an array of custom integration
|
||||
/// rules e.g. higher order than the default rules. If
|
||||
/// present the array will be indexed by Geometry::Type.
|
||||
/// @param[in] elems Optional pointer to a marker array, with a length
|
||||
/// equal to the number of local elements, indicating
|
||||
/// which elements to integrate over. Only those elements
|
||||
/// corresponding to non-zero entries in @a elems will
|
||||
/// contribute to the computed L2 error.
|
||||
///
|
||||
/// @note If an array of integration rules is provided through @a irs, be
|
||||
/// sure to include valid rules for each element type that may occur
|
||||
/// in the list of elements.
|
||||
///
|
||||
/// @note Quadratures with negative weights (as in some simplex integration
|
||||
/// rules in MFEM) can produce negative integrals even with
|
||||
/// non-negative integrands. To avoid returning negative errors this
|
||||
/// function uses the absolute values of the element-wise integrals.
|
||||
/// This may lead to results which are not entirely consistent with
|
||||
/// such integration rules.
|
||||
virtual real_t ComputeLpError(const real_t p,
|
||||
Coefficient &exsolr,
|
||||
Coefficient &exsoli,
|
||||
Coefficient *weight = NULL,
|
||||
const IntegrationRule *irs[] = NULL,
|
||||
const Array<int> *elems = NULL) const;
|
||||
|
||||
/// Save the ComplexGridFunction to an output stream.
|
||||
virtual void Save(std::ostream &out) const;
|
||||
|
||||
@@ -323,6 +392,9 @@ private:
|
||||
bool RealInteg();
|
||||
bool ImagInteg();
|
||||
|
||||
void BuildComplexOperator(OperatorHandle &A_r, OperatorHandle &A_i,
|
||||
OperatorHandle &A) const;
|
||||
|
||||
public:
|
||||
SesquilinearForm(FiniteElementSpace *fes,
|
||||
ComplexOperator::Convention
|
||||
@@ -436,6 +508,186 @@ public:
|
||||
virtual ~SesquilinearForm();
|
||||
};
|
||||
|
||||
/** Class for a mixed sesquilinear form
|
||||
|
||||
A mixed sesquilinear form is a generalization of a mixed bilinear form to
|
||||
complex-valued fields. Mixed sesquilinear forms are linear in the second
|
||||
argument but the first argument involves a complex conjugate in the sense
|
||||
that:
|
||||
|
||||
a(alpha u, beta v) = conj(alpha) beta a(u, v)
|
||||
|
||||
The @a convention argument in the class's constructor is documented in the
|
||||
mfem::ComplexOperator class found in linalg/complex_operator.hpp.
|
||||
|
||||
When supplying integrators to the MixedSesquilinearForm either the real or
|
||||
imaginary integrator can be NULL. This indicates that the corresponding
|
||||
portion of the complex-valued material coefficient is equal to zero.
|
||||
*/
|
||||
class MixedSesquilinearForm
|
||||
{
|
||||
private:
|
||||
ComplexOperator::Convention conv;
|
||||
|
||||
MixedBilinearForm * mblfr;
|
||||
MixedBilinearForm * mblfi;
|
||||
|
||||
/* These methods check if the real/imag parts of the sesqulinear form are not
|
||||
empty */
|
||||
bool RealInteg();
|
||||
bool ImagInteg();
|
||||
|
||||
public:
|
||||
MixedSesquilinearForm(
|
||||
FiniteElementSpace * trial_fes,
|
||||
FiniteElementSpace * test_fes,
|
||||
ComplexOperator::Convention convention = ComplexOperator::HERMITIAN);
|
||||
|
||||
/** @brief Create a MixedSesquilinearForm on the given trial and test
|
||||
FiniteElementSpaces, using the same integrators as the
|
||||
MixedBilinearForms @a bfr and @a bfi.
|
||||
|
||||
The FiniteElementSpace pointers are not owned by the newly constructed
|
||||
object.
|
||||
|
||||
The integrators are copied as pointers and they are not owned by the
|
||||
newly constructed MixedSesquilinearForm. */
|
||||
MixedSesquilinearForm(
|
||||
FiniteElementSpace * trial_fes,
|
||||
FiniteElementSpace * test_fes,
|
||||
MixedBilinearForm * bfr,
|
||||
MixedBilinearForm * bfi,
|
||||
ComplexOperator::Convention convention = ComplexOperator::HERMITIAN);
|
||||
|
||||
ComplexOperator::Convention GetConvention() const { return conv; }
|
||||
void SetConvention(const ComplexOperator::Convention & convention) { conv = convention; }
|
||||
|
||||
/// Set the desired assembly level.
|
||||
/** Valid choices are:
|
||||
|
||||
- AssemblyLevel::LEGACY (default)
|
||||
- AssemblyLevel::FULL
|
||||
- AssemblyLevel::PARTIAL
|
||||
- AssemblyLevel::ELEMENT
|
||||
- AssemblyLevel::NONE
|
||||
|
||||
This method must be called before assembly. */
|
||||
void SetAssemblyLevel(AssemblyLevel assembly_level)
|
||||
{
|
||||
mblfr->SetAssemblyLevel(assembly_level);
|
||||
mblfi->SetAssemblyLevel(assembly_level);
|
||||
}
|
||||
|
||||
MixedBilinearForm & real() { return *mblfr; }
|
||||
MixedBilinearForm & imag() { return *mblfi; }
|
||||
const MixedBilinearForm & real() const { return *mblfr; }
|
||||
const MixedBilinearForm & imag() const { return *mblfi; }
|
||||
|
||||
/// Adds new Domain Integrator.
|
||||
void AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds new Domain Integrator, restricted to specific attributes.
|
||||
void AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & elem_marker);
|
||||
|
||||
/// Adds new Boundary Integrator.
|
||||
void AddBoundaryIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/** @brief Adds new boundary Integrator, restricted to specific boundary
|
||||
attributes.
|
||||
|
||||
Assumes ownership of @a bfi.
|
||||
|
||||
The mfem::array @a bdr_marker is stored internally as a pointer to the given
|
||||
mfem::Array<int> object. */
|
||||
void AddBoundaryIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker);
|
||||
|
||||
/// Adds new interior Face Integrator. Assumes ownership of @a bfi.
|
||||
void AddInteriorFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds new boundary Face Integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/** @brief Adds new boundary Face Integrator, restricted to specific boundary
|
||||
attributes.
|
||||
|
||||
Assumes ownership of @a bfi.
|
||||
|
||||
The mfem::array @a bdr_marker is stored internally as a pointer to the given
|
||||
mfem::Array<int> object. */
|
||||
void AddBdrFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker);
|
||||
|
||||
/** @brief Add a trace face integrator. Assumes ownership of @a bfi.
|
||||
|
||||
This type of integrator assembles terms over all faces of the mesh using
|
||||
the face FE from the trial space and the two adjacent volume FEs from
|
||||
the test space. */
|
||||
void AddTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds a boundary trace face integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds a boundary trace face integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> &bdr_marker);
|
||||
|
||||
/// Assemble the local matrix
|
||||
void Assemble(int skip_zeros = 1);
|
||||
|
||||
/// Finalizes the matrix initialization.
|
||||
void Finalize(int skip_zeros = 1);
|
||||
|
||||
/// Updates the internal mixed forms with the new finite element space.
|
||||
virtual void Update();
|
||||
|
||||
/** @brief Return a ComplexSparseMatrix wrapping the local (L-dof) real
|
||||
and imaginary matrices of the form.
|
||||
|
||||
The returned wrapper has to be deleted by the caller, but it does not
|
||||
own the wrapped real and imaginary matrices, which remain owned by
|
||||
this form. */
|
||||
ComplexSparseMatrix *AssembleComplexSparseMatrix();
|
||||
|
||||
/// Return the trial FE space associated with the MixedSesquilinearForm.
|
||||
FiniteElementSpace *TrialFESpace() { return mblfr->TrialFESpace(); }
|
||||
|
||||
/// Read-only access to the associated trial FiniteElementSpace.
|
||||
const FiniteElementSpace *TrialFESpace() const { return mblfr->TrialFESpace(); }
|
||||
|
||||
/// Return the test FE space associated with the MixedSesquilinearForm.
|
||||
FiniteElementSpace *TestFESpace() { return mblfr->TestFESpace(); }
|
||||
|
||||
/// Read-only access to the associated test FiniteElementSpace.
|
||||
const FiniteElementSpace *TestFESpace() const { return mblfr->TestFESpace(); }
|
||||
|
||||
|
||||
void FormRectangularLinearSystem(const Array<int> & ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
Vector & x,
|
||||
Vector & b,
|
||||
OperatorHandle & A,
|
||||
Vector & X,
|
||||
Vector & B);
|
||||
|
||||
void FormRectangularSystemMatrix(const Array<int> & ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
OperatorHandle & A);
|
||||
|
||||
virtual ~MixedSesquilinearForm();
|
||||
};
|
||||
|
||||
#ifdef MFEM_USE_MPI
|
||||
|
||||
/// Class for parallel complex-valued grid function - real + imaginary part
|
||||
@@ -737,6 +989,12 @@ private:
|
||||
bool RealInteg();
|
||||
bool ImagInteg();
|
||||
|
||||
void SetImaginaryEssentialDiagonalToZero(
|
||||
const Array<int> &ess_tdof_list, OperatorHandle &A);
|
||||
|
||||
void BuildComplexOperator(OperatorHandle &A_r, OperatorHandle &A_i,
|
||||
OperatorHandle &A) const;
|
||||
|
||||
public:
|
||||
ParSesquilinearForm(ParFiniteElementSpace *pf,
|
||||
ComplexOperator::Convention
|
||||
@@ -852,6 +1110,169 @@ public:
|
||||
virtual ~ParSesquilinearForm();
|
||||
};
|
||||
|
||||
/** Class for a parallel mixed sesquilinear form
|
||||
|
||||
A mixed sesquilinear form is a generalization of a mixed bilinear form to
|
||||
complex-valued fields. Mixed sesquilinear forms are linear in the second
|
||||
argument but the first argument involves a complex conjugate in the sense
|
||||
that:
|
||||
|
||||
a(alpha u, beta v) = conj(alpha) beta a(u, v)
|
||||
|
||||
The @a convention argument in the class's constructor is documented in the
|
||||
mfem::ComplexOperator class found in linalg/complex_operator.hpp.
|
||||
|
||||
When supplying integrators to the ParMixedSesquilinearForm either the real
|
||||
or imaginary integrator can be NULL. This indicates that the corresponding
|
||||
portion of the complex-valued material coefficient is equal to zero.
|
||||
*/
|
||||
class ParMixedSesquilinearForm
|
||||
{
|
||||
private:
|
||||
ComplexOperator::Convention conv;
|
||||
|
||||
ParMixedBilinearForm * pmblfr;
|
||||
ParMixedBilinearForm * pmblfi;
|
||||
|
||||
/* These methods check if the real/imag parts of the sesqulinear form are
|
||||
not empty */
|
||||
bool RealInteg();
|
||||
bool ImagInteg();
|
||||
|
||||
public:
|
||||
ParMixedSesquilinearForm(
|
||||
ParFiniteElementSpace * trial_fes,
|
||||
ParFiniteElementSpace * test_fes,
|
||||
ComplexOperator::Convention convention = ComplexOperator::HERMITIAN);
|
||||
|
||||
/** @brief Create a ParMixedSesquilinearForm on the given trial and test
|
||||
ParFiniteElementSpaces, using the same integrators as the
|
||||
ParMixedBilinearForms @a pbfr and @a pbfi.
|
||||
|
||||
The ParFiniteElementSpace pointers are not owned by the newly
|
||||
constructed object.
|
||||
|
||||
The integrators are copied as pointers and they are not owned by the
|
||||
newly constructed ParMixedSesquilinearForm. */
|
||||
ParMixedSesquilinearForm(
|
||||
ParFiniteElementSpace * trial_fes,
|
||||
ParFiniteElementSpace * test_fes,
|
||||
ParMixedBilinearForm * pbfr,
|
||||
ParMixedBilinearForm * pbfi,
|
||||
ComplexOperator::Convention convention = ComplexOperator::HERMITIAN);
|
||||
|
||||
ComplexOperator::Convention GetConvention() const { return conv; }
|
||||
void SetConvention(const ComplexOperator::Convention & convention) { conv = convention; }
|
||||
|
||||
/// Set the desired assembly level.
|
||||
/** Valid choices are:
|
||||
|
||||
- AssemblyLevel::LEGACY (default)
|
||||
- AssemblyLevel::FULL
|
||||
- AssemblyLevel::PARTIAL
|
||||
- AssemblyLevel::ELEMENT
|
||||
- AssemblyLevel::NONE
|
||||
|
||||
This method must be called before assembly. */
|
||||
void SetAssemblyLevel(AssemblyLevel assembly_level)
|
||||
{
|
||||
pmblfr->SetAssemblyLevel(assembly_level);
|
||||
pmblfi->SetAssemblyLevel(assembly_level);
|
||||
}
|
||||
|
||||
ParMixedBilinearForm & real() { return *pmblfr; }
|
||||
ParMixedBilinearForm & imag() { return *pmblfi; }
|
||||
const ParMixedBilinearForm & real() const { return *pmblfr; }
|
||||
const ParMixedBilinearForm & imag() const { return *pmblfi; }
|
||||
|
||||
/// Adds new Domain Integrator.
|
||||
void AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds new Domain Integrator, restricted to specific attributes.
|
||||
void AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & elem_marker);
|
||||
|
||||
/// Adds new Boundary Integrator.
|
||||
void AddBoundaryIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/** @brief Adds new boundary Integrator, restricted to specific boundary
|
||||
attributes.
|
||||
|
||||
Assumes ownership of @a bfi.
|
||||
|
||||
The mfem::array @a bdr_marker is stored internally as a pointer to the given
|
||||
mfem::Array<int> object. */
|
||||
void AddBoundaryIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker);
|
||||
|
||||
/// Adds new interior Face Integrator. Assumes ownership of @a bfi.
|
||||
void AddInteriorFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds new boundary Face Integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/** @brief Adds new boundary Face Integrator, restricted to specific boundary
|
||||
attributes.
|
||||
|
||||
Assumes ownership of @a bfi.
|
||||
|
||||
The mfem::array @a bdr_marker is stored internally as a pointer to the given
|
||||
mfem::Array<int> object. */
|
||||
void AddBdrFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker);
|
||||
|
||||
/** @brief Add a trace face integrator. Assumes ownership of @a bfi.
|
||||
|
||||
This type of integrator assembles terms over all faces of the mesh using
|
||||
the face FE from the trial space and the two adjacent volume FEs from
|
||||
the test space. */
|
||||
void AddTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds a boundary trace face integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds a boundary trace face integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> &bdr_marker);
|
||||
|
||||
/// Assemble the local matrix
|
||||
void Assemble(int skip_zeros = 1);
|
||||
|
||||
/// Finalizes the matrix initialization.
|
||||
void Finalize(int skip_zeros = 1);
|
||||
|
||||
/// Updates the internal mixed forms with the new finite element space.
|
||||
virtual void Update();
|
||||
|
||||
/// Returns the matrix assembled on the true dofs, i.e. P^t A P.
|
||||
/** The returned matrix has to be deleted by the caller. */
|
||||
ComplexHypreParMatrix * ParallelAssemble();
|
||||
|
||||
void FormRectangularLinearSystem(const Array<int> & ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
Vector & x,
|
||||
Vector & b,
|
||||
OperatorHandle & A,
|
||||
Vector & X,
|
||||
Vector & B);
|
||||
|
||||
void FormRectangularSystemMatrix(const Array<int> & ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
OperatorHandle & A);
|
||||
|
||||
virtual ~ParMixedSesquilinearForm();
|
||||
};
|
||||
|
||||
#endif // MFEM_USE_MPI
|
||||
|
||||
}
|
||||
|
||||
@@ -809,7 +809,7 @@ ParaViewDataCollectionBase::ParaViewDataCollectionBase(
|
||||
|
||||
void ParaViewDataCollectionBase::SetLevelsOfDetail(int levels_of_detail_)
|
||||
{
|
||||
levels_of_detail = levels_of_detail_;
|
||||
levels_of_detail = std::max(levels_of_detail_, 1);
|
||||
}
|
||||
|
||||
void ParaViewDataCollectionBase::SetHighOrderOutput(bool high_order_output_)
|
||||
@@ -1181,12 +1181,14 @@ void ParaViewDataCollection::SaveGFieldVTU(std::ostream &os, int ref_,
|
||||
DenseMatrix vval, pmat;
|
||||
std::vector<char> buf;
|
||||
int vec_dim = it->second->VectorDim();
|
||||
int map_type = it->second->FESpace()->GetTypicalFE()->GetMapType();
|
||||
os << "<DataArray type=\"" << GetDataTypeString()
|
||||
<< "\" Name=\"" << it->first
|
||||
<< "\" NumberOfComponents=\"" << vec_dim << "\" "
|
||||
<< VTKComponentLabels(vec_dim) << " "
|
||||
<< "format=\"" << GetDataFormatString() << "\" >" << '\n';
|
||||
if (vec_dim == 1)
|
||||
if (vec_dim == 1 && (map_type == FiniteElement::VALUE ||
|
||||
map_type == FiniteElement::INTEGRAL))
|
||||
{
|
||||
for (int i = 0; i < mesh->GetNE(); i++)
|
||||
{
|
||||
|
||||
@@ -51,4 +51,52 @@ DifferentiableOperator::DifferentiableOperator(
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
void FDJacobian::Mult(const Vector &v, Vector &y) const
|
||||
{
|
||||
// See [1] for choice of eps.
|
||||
//
|
||||
// [1] Woodward, C.S., Gardner, D.J. and Evans, K.J., 2015. On the use of
|
||||
// finite difference matrix-vector products in Newton-Krylov solvers for
|
||||
// implicit climate dynamics with spectral elements. Procedia Computer
|
||||
// Science, 51, pp.2036-2045.
|
||||
real_t eps;
|
||||
if (fixed_eps > 0.0)
|
||||
{
|
||||
eps = fixed_eps;
|
||||
}
|
||||
else
|
||||
{
|
||||
const real_t vnorm_local = v.Norml2();
|
||||
real_t vnorm;
|
||||
MPI_Allreduce(&vnorm_local, &vnorm, 1, MPITypeMap<real_t>::mpi_type, MPI_SUM,
|
||||
MPI_COMM_WORLD);
|
||||
eps = lambda * (lambda + xnorm / vnorm);
|
||||
}
|
||||
|
||||
// x + eps * v
|
||||
{
|
||||
const auto d_v = v.Read();
|
||||
const auto d_x = x.Read();
|
||||
auto d_xpev = xpev.Write();
|
||||
mfem::forall(x.Size(), [=] MFEM_HOST_DEVICE (int i)
|
||||
{
|
||||
d_xpev[i] = d_x[i] + eps * d_v[i];
|
||||
});
|
||||
}
|
||||
|
||||
// y = f(x + eps * v)
|
||||
op.Mult(xpev, y);
|
||||
|
||||
// y = (f(x + eps * v) - f(x)) / eps
|
||||
{
|
||||
const auto d_f = f.Read();
|
||||
auto d_y = y.ReadWrite();
|
||||
mfem::forall(f.Size(), [=] MFEM_HOST_DEVICE (int i)
|
||||
{
|
||||
d_y[i] = (d_y[i] - d_f[i]) / eps;
|
||||
});
|
||||
}
|
||||
}
|
||||
|
||||
#endif // MFEM_USE_MPI
|
||||
|
||||
+23
-22
@@ -697,17 +697,18 @@ void DifferentiableOperator::AddIntegrator(
|
||||
|
||||
// The explicit captures are necessary to avoid dependency on
|
||||
// the specific instance of this class (this pointer).
|
||||
restriction_callback =
|
||||
[=, solutions = this->solutions, parameters = this->parameters]
|
||||
(std::vector<Vector> &sol,
|
||||
const std::vector<Vector> &par,
|
||||
std::vector<Vector> &f)
|
||||
restriction_callback = [element_dof_ordering,
|
||||
solutions_ = this->solutions,
|
||||
parameters_ = this->parameters]
|
||||
(std::vector<Vector> &sol,
|
||||
const std::vector<Vector> &par,
|
||||
std::vector<Vector> &f)
|
||||
{
|
||||
restriction<entity_t>(solutions, sol, f,
|
||||
restriction<entity_t>(solutions_, sol, f,
|
||||
element_dof_ordering);
|
||||
restriction<entity_t>(parameters, par, f,
|
||||
restriction<entity_t>(parameters_, par, f,
|
||||
element_dof_ordering,
|
||||
solutions.size());
|
||||
solutions_.size());
|
||||
};
|
||||
|
||||
prolongation_transpose = get_prolongation_transpose(
|
||||
@@ -835,19 +836,19 @@ void DifferentiableOperator::AddIntegrator(
|
||||
|
||||
// capture by ref:
|
||||
&restriction_cb = this->restriction_callback,
|
||||
&fields_e = this->fields_e,
|
||||
&residual_e = this->residual_e,
|
||||
&output_restriction_transpose = this->output_restriction_transpose
|
||||
&fields_e_ = this->fields_e,
|
||||
&residual_e_ = this->residual_e,
|
||||
&output_restriction_transpose_ = this->output_restriction_transpose
|
||||
]
|
||||
(std::vector<Vector> &sol, const std::vector<Vector> &par, Vector &res)
|
||||
mutable // mutable: needed to modify 'shmem_cache'
|
||||
{
|
||||
restriction_cb(sol, par, fields_e);
|
||||
restriction_cb(sol, par, fields_e_);
|
||||
|
||||
residual_e = 0.0;
|
||||
auto ye = Reshape(residual_e.ReadWrite(), test_vdim, num_test_dof, num_entities);
|
||||
residual_e_ = 0.0;
|
||||
auto ye = Reshape(residual_e_.ReadWrite(), test_vdim, num_test_dof, num_entities);
|
||||
|
||||
auto wrapped_fields_e = wrap_fields(fields_e,
|
||||
auto wrapped_fields_e = wrap_fields(fields_e_,
|
||||
action_shmem_info.field_sizes,
|
||||
num_entities);
|
||||
|
||||
@@ -878,7 +879,7 @@ void DifferentiableOperator::AddIntegrator(
|
||||
y, fhat, output_fop, output_dtq_shmem[0],
|
||||
scratch_shmem, dimension, use_sum_factorization);
|
||||
}, num_entities, thread_blocks, action_shmem_info.total_size, shmem_cache.ReadWrite());
|
||||
output_restriction_transpose(residual_e, res);
|
||||
output_restriction_transpose_(residual_e_, res);
|
||||
});
|
||||
|
||||
// Without this compile-time check, some valid instantiations of this method
|
||||
@@ -1193,7 +1194,7 @@ void DifferentiableOperator::AddIntegrator(
|
||||
|
||||
// capture by ref:
|
||||
&qpdc_mem = derivative_qp_caches_ref,
|
||||
&fields = fields_ref
|
||||
&fields_ = fields_ref
|
||||
](std::vector<Vector> &f_e, SparseMatrix *&A) mutable
|
||||
{
|
||||
auto wrapped_fields_e = wrap_fields(f_e, shmem_info.field_sizes,
|
||||
@@ -1241,14 +1242,14 @@ void DifferentiableOperator::AddIntegrator(
|
||||
{
|
||||
if (input_is_dependent[s])
|
||||
{
|
||||
trial_field = &fields[input_to_field[s]];
|
||||
trial_field = &fields_[input_to_field[s]];
|
||||
}
|
||||
}
|
||||
|
||||
auto trial_fes = *std::get_if<const ParFiniteElementSpace *>
|
||||
(&trial_field->data);
|
||||
auto test_fes = *std::get_if<const ParFiniteElementSpace *>
|
||||
(&fields[output_to_field[0]].data);
|
||||
(&fields_[output_to_field[0]].data);
|
||||
|
||||
A = new SparseMatrix(test_fes->GetVSize(), trial_fes->GetVSize());
|
||||
|
||||
@@ -1334,7 +1335,7 @@ void DifferentiableOperator::AddIntegrator(
|
||||
input_to_field,
|
||||
output_to_field,
|
||||
&spmatcb = assemble_derivative_sparsematrix_callbacks_ref,
|
||||
&fields = fields_ref
|
||||
&fields_ = fields_ref
|
||||
](std::vector<Vector> &f_e, HypreParMatrix *&A) mutable
|
||||
{
|
||||
SparseMatrix *spmat = nullptr;
|
||||
@@ -1366,14 +1367,14 @@ void DifferentiableOperator::AddIntegrator(
|
||||
{
|
||||
if (input_is_dependent[s])
|
||||
{
|
||||
trial_field = &fields[input_to_field[s]];
|
||||
trial_field = &fields_[input_to_field[s]];
|
||||
}
|
||||
}
|
||||
|
||||
auto trial_fes = *std::get_if<const ParFiniteElementSpace *>
|
||||
(&trial_field->data);
|
||||
auto test_fes = *std::get_if<const ParFiniteElementSpace *>
|
||||
(&fields[output_to_field[0]].data);
|
||||
(&fields_[output_to_field[0]].data);
|
||||
|
||||
if (same_test_and_trial)
|
||||
{
|
||||
|
||||
+742
-768
File diff suppressed because it is too large
Load Diff
+9
-52
@@ -597,7 +597,7 @@ struct ThreadBlocks
|
||||
int z = 1;
|
||||
};
|
||||
|
||||
#if defined(MFEM_USE_CUDA_OR_HIP)
|
||||
#if defined(MFEM_USE_CUDA_OR_HIP_LANG)
|
||||
template <typename func_t>
|
||||
__global__ void forall_kernel_shmem(func_t f, int n)
|
||||
{
|
||||
@@ -617,10 +617,11 @@ void forall(func_t f,
|
||||
int num_shmem = 0,
|
||||
real_t *shmem = nullptr)
|
||||
{
|
||||
if (Device::Allows(Backend::CUDA_MASK) ||
|
||||
Device::Allows(Backend::HIP_MASK))
|
||||
internal::RequireKernelCompilation();
|
||||
|
||||
#if defined(MFEM_USE_CUDA_OR_HIP_LANG)
|
||||
if (Device::Allows(Backend::CUDA_MASK | Backend::HIP_MASK))
|
||||
{
|
||||
#if defined(MFEM_USE_CUDA_OR_HIP)
|
||||
// int gridsize = (N + Z - 1) / Z;
|
||||
int num_bytes = num_shmem * sizeof(decltype(shmem));
|
||||
dim3 block_size(blocks.x, blocks.y, blocks.z);
|
||||
@@ -631,9 +632,10 @@ void forall(func_t f,
|
||||
MFEM_GPU_CHECK(hipGetLastError());
|
||||
#endif
|
||||
MFEM_DEVICE_SYNC;
|
||||
#endif
|
||||
return;
|
||||
}
|
||||
else if (Device::Allows(Backend::CPU_MASK))
|
||||
#endif
|
||||
if (Device::Allows(Backend::CPU_MASK))
|
||||
{
|
||||
MFEM_ASSERT(!((bool)num_shmem != (bool)shmem),
|
||||
"Backend::CPU needs a pre-allocated shared memory block");
|
||||
@@ -671,52 +673,7 @@ public:
|
||||
MPI_COMM_WORLD);
|
||||
}
|
||||
|
||||
void Mult(const Vector &v, Vector &y) const override
|
||||
{
|
||||
// See [1] for choice of eps.
|
||||
//
|
||||
// [1] Woodward, C.S., Gardner, D.J. and Evans, K.J., 2015. On the use of
|
||||
// finite difference matrix-vector products in Newton-Krylov solvers for
|
||||
// implicit climate dynamics with spectral elements. Procedia Computer
|
||||
// Science, 51, pp.2036-2045.
|
||||
real_t eps;
|
||||
if (fixed_eps > 0.0)
|
||||
{
|
||||
eps = fixed_eps;
|
||||
}
|
||||
else
|
||||
{
|
||||
const real_t vnorm_local = v.Norml2();
|
||||
real_t vnorm;
|
||||
MPI_Allreduce(&vnorm_local, &vnorm, 1, MPITypeMap<real_t>::mpi_type, MPI_SUM,
|
||||
MPI_COMM_WORLD);
|
||||
eps = lambda * (lambda + xnorm / vnorm);
|
||||
}
|
||||
|
||||
// x + eps * v
|
||||
{
|
||||
const auto d_v = v.Read();
|
||||
const auto d_x = x.Read();
|
||||
auto d_xpev = xpev.Write();
|
||||
mfem::forall(x.Size(), [=] MFEM_HOST_DEVICE (int i)
|
||||
{
|
||||
d_xpev[i] = d_x[i] + eps * d_v[i];
|
||||
});
|
||||
}
|
||||
|
||||
// y = f(x + eps * v)
|
||||
op.Mult(xpev, y);
|
||||
|
||||
// y = (f(x + eps * v) - f(x)) / eps
|
||||
{
|
||||
const auto d_f = f.Read();
|
||||
auto d_y = y.ReadWrite();
|
||||
mfem::forall(f.Size(), [=] MFEM_HOST_DEVICE (int i)
|
||||
{
|
||||
d_y[i] = (d_y[i] - d_f[i]) / eps;
|
||||
});
|
||||
}
|
||||
}
|
||||
void Mult(const Vector &v, Vector &y) const override;
|
||||
|
||||
virtual MemoryClass GetMemoryClass() const override
|
||||
{
|
||||
|
||||
+6
-5
@@ -1316,13 +1316,14 @@ void VectorFiniteElement::Project_RT(
|
||||
}
|
||||
}
|
||||
|
||||
void VectorFiniteElement::ProjectGrad_RT(
|
||||
void VectorFiniteElement::ProjectCurl2D_RT(
|
||||
const real_t *nk, const Array<int> &d2n, const FiniteElement &fe,
|
||||
ElementTransformation &Trans, DenseMatrix &grad) const
|
||||
{
|
||||
// 2D "ProjectCurl_RT"
|
||||
if (dim != 2)
|
||||
{
|
||||
mfem_error("VectorFiniteElement::ProjectGrad_RT works only in 2D!");
|
||||
mfem_error("VectorFiniteElement::ProjectCurl2D_RT works only in 2D!");
|
||||
}
|
||||
|
||||
DenseMatrix dshape(fe.GetDof(), fe.GetDim());
|
||||
@@ -1333,8 +1334,8 @@ void VectorFiniteElement::ProjectGrad_RT(
|
||||
for (int k = 0; k < dof; k++)
|
||||
{
|
||||
fe.CalcDShape(Nodes.IntPoint(k), dshape);
|
||||
tk[0] = nk[d2n[k]*dim+1];
|
||||
tk[1] = -nk[d2n[k]*dim];
|
||||
tk[0] = -nk[d2n[k]*dim+1];
|
||||
tk[1] = nk[d2n[k]*dim];
|
||||
dshape.Mult(tk, grad_k);
|
||||
for (int j = 0; j < grad_k.Size(); j++)
|
||||
{
|
||||
@@ -1381,7 +1382,7 @@ void VectorFiniteElement::ProjectCurl_ND(
|
||||
}
|
||||
}
|
||||
|
||||
void VectorFiniteElement::ProjectCurl_RT(
|
||||
void VectorFiniteElement::ProjectCurl3D_RT(
|
||||
const real_t *nk, const Array<int> &d2n, const FiniteElement &fe,
|
||||
ElementTransformation &Trans, DenseMatrix &curl) const
|
||||
{
|
||||
|
||||
+8
-7
@@ -957,10 +957,11 @@ protected:
|
||||
const FiniteElement &fe, ElementTransformation &Trans,
|
||||
DenseMatrix &I) const;
|
||||
|
||||
// rotated gradient in 2D
|
||||
void ProjectGrad_RT(const real_t *nk, const Array<int> &d2n,
|
||||
const FiniteElement &fe, ElementTransformation &Trans,
|
||||
DenseMatrix &grad) const;
|
||||
// Input is a scalar representing the Z (out of plane) component, Output is
|
||||
// the X-Y (in-plane) RT curl
|
||||
void ProjectCurl2D_RT(const real_t *nk, const Array<int> &d2n,
|
||||
const FiniteElement &fe, ElementTransformation &Trans,
|
||||
DenseMatrix &grad) const;
|
||||
|
||||
// Compute the curl as a discrete operator from ND FE (fe) to ND FE (this).
|
||||
// The natural FE for the range is RT, so this is an approximation.
|
||||
@@ -968,9 +969,9 @@ protected:
|
||||
const FiniteElement &fe, ElementTransformation &Trans,
|
||||
DenseMatrix &curl) const;
|
||||
|
||||
void ProjectCurl_RT(const real_t *nk, const Array<int> &d2n,
|
||||
const FiniteElement &fe, ElementTransformation &Trans,
|
||||
DenseMatrix &curl) const;
|
||||
void ProjectCurl3D_RT(const real_t *nk, const Array<int> &d2n,
|
||||
const FiniteElement &fe, ElementTransformation &Trans,
|
||||
DenseMatrix &curl) const;
|
||||
|
||||
/** @brief Project a vector coefficient onto the ND basis functions
|
||||
@param tk Edge tangent vectors for this element type
|
||||
|
||||
@@ -307,12 +307,12 @@ public:
|
||||
|
||||
/** @brief virtual function which evaluates the values of all
|
||||
shape functions at a given point ip and stores
|
||||
them in the vector shape of dimension Dof (4) */
|
||||
them in the vector shape of dimension Dof (6) */
|
||||
void CalcShape(const IntegrationPoint &ip, Vector &shape) const override;
|
||||
|
||||
/** @brief virtual function which evaluates the values of all
|
||||
partial derivatives of all shape functions at a given
|
||||
point ip and stores them in the matrix dshape (Dof x Dim) (4 x 3)
|
||||
point ip and stores them in the matrix dshape (Dof x Dim) (6 x 3)
|
||||
so that each row contains the derivatives of one shape function */
|
||||
void CalcDShape(const IntegrationPoint &ip,
|
||||
DenseMatrix &dshape) const override;
|
||||
@@ -336,12 +336,12 @@ public:
|
||||
|
||||
/** @brief virtual function which evaluates the values of all
|
||||
shape functions at a given point ip and stores
|
||||
them in the vector shape of dimension Dof (4) */
|
||||
them in the vector shape of dimension Dof (5) */
|
||||
void CalcShape(const IntegrationPoint &ip, Vector &shape) const override;
|
||||
|
||||
/** @brief virtual function which evaluates the values of all
|
||||
partial derivatives of all shape functions at a given
|
||||
point ip and stores them in the matrix dshape (Dof x Dim) (4 x 3)
|
||||
point ip and stores them in the matrix dshape (Dof x Dim) (5 x 3)
|
||||
so that each row contains the derivatives of one shape function */
|
||||
void CalcDShape(const IntegrationPoint &ip,
|
||||
DenseMatrix &dshape) const override;
|
||||
|
||||
+131
-58
@@ -1757,22 +1757,45 @@ H1_BergotPyramidElement::H1_BergotPyramidElement(const int p, const int btype)
|
||||
real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
real_t z = ip.z;
|
||||
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
// Compute the limit of the basis functions as z->1 with x and y on the
|
||||
// line between the center of the base and the apex
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
T(o++, m) = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
T(o++, m) = ((k + 3.) * k + 2.) / 2.;
|
||||
}
|
||||
else
|
||||
{
|
||||
T(o++, m) = 0.;
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
{
|
||||
T(o++, m) = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -1793,25 +1816,44 @@ void H1_BergotPyramidElement::CalcShape(const IntegrationPoint &ip,
|
||||
Vector u(dof);
|
||||
#endif
|
||||
|
||||
real_t x = (ip.z < 1.0) ? (ip.x / (1.0 - ip.z)) : 0.0;
|
||||
real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
real_t z = ip.z;
|
||||
const real_t x = (ip.z < 1.0) ? (ip.x / (1.0 - ip.z)) : 0.0;
|
||||
const real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
const real_t z = ip.z;
|
||||
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0), z, 1.0,
|
||||
shape_z);
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
u[o++] = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
}
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
// Compute the limit of the basis functions as z->1 with x and y on the
|
||||
// line between the center of the base and the apex
|
||||
u = 0.;
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
u(o) = ((k + 3.) * k + 2.) / 2.;
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
u[o++] = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
}
|
||||
}
|
||||
Ti.Mult(u, shape);
|
||||
}
|
||||
|
||||
@@ -1830,37 +1872,68 @@ void H1_BergotPyramidElement::CalcDShape(const IntegrationPoint &ip,
|
||||
Vector dshape_z(order+1);
|
||||
Vector dshape_z_dt(order+1);
|
||||
#endif
|
||||
real_t x = (ip.z < 1.0) ? (ip.x / (1.0 - ip.z)) : 0.0;
|
||||
real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
real_t z = ip.z;
|
||||
const real_t x = (ip.z < 1.0) ? (ip.x / (1.0 - ip.z)) : 0.0;
|
||||
const real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
const real_t z = ip.z;
|
||||
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData(), dshape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData(), dshape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0), z, 1.0,
|
||||
shape_z, dshape_z, dshape_z_dt);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
// Compute the limit of the gradients of the basis functions as
|
||||
// z->1 with x and y on the line between the center of the base and the
|
||||
// apex
|
||||
du = 0.;
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
du(o,0) = dshape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,1) = shape_x(i) * dshape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,2) = shape_x(i) * shape_y(j) * dshape_z(k) *
|
||||
pow(1.0 - ip.z, maxij) +
|
||||
(ip.x * dshape_x(i) * shape_y(j) +
|
||||
ip.y * shape_x(i) * dshape_y(j)) *
|
||||
shape_z(k) * pow(1.0 - ip.z, maxij - 2) -
|
||||
maxij * shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
{
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
du(o,2) = (((k + 6.) * k + 11.) * k + 6.) * k / 6.;
|
||||
}
|
||||
else if (i == 1 && j == 0)
|
||||
{
|
||||
du(o,0) = ((((k + 10.) * k + 35.) * k + 50.) * k + 24.) / 24.;
|
||||
}
|
||||
else if (i == 0 && j == 1)
|
||||
{
|
||||
du(o,1) = ((((k + 10.) * k + 35.) * k + 50.) * k + 24.) / 24.;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData(), dshape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData(), dshape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0,
|
||||
shape_z, dshape_z, dshape_z_dt);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
{
|
||||
du(o,0) = dshape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,1) = shape_x(i) * dshape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,2) = shape_x(i) * shape_y(j) * dshape_z(k) *
|
||||
pow(1.0 - ip.z, maxij) +
|
||||
(ip.x * dshape_x(i) * shape_y(j) +
|
||||
ip.y * shape_x(i) * dshape_y(j)) *
|
||||
shape_z(k) * pow(1.0 - ip.z, maxij - 2) -
|
||||
maxij * shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
(maxij > 0 ? pow(1.0 - ip.z, maxij - 1) : 0.0);
|
||||
}
|
||||
}
|
||||
}
|
||||
Ti.Mult(du, dshape);
|
||||
}
|
||||
|
||||
|
||||
@@ -208,6 +208,8 @@ private:
|
||||
#endif
|
||||
DenseMatrixInverse Ti;
|
||||
|
||||
static constexpr real_t apex_tol = 1e-8;
|
||||
|
||||
public:
|
||||
H1_BergotPyramidElement(const int p,
|
||||
const int btype = BasisType::GaussLobatto);
|
||||
|
||||
+130
-56
@@ -1106,9 +1106,16 @@ L2_BergotPyramidElement::L2_BergotPyramidElement(const int p, const int btype)
|
||||
{
|
||||
const real_t wik = op[i] + op[k] + op[p-i-k];
|
||||
const real_t w = wik * wjk * op[p-k];
|
||||
Nodes.IntPoint(o++).Set3(op[i] * (op[j] + op[p-j-k]) / w,
|
||||
op[j] * (op[j] + op[p-j-k]) / w,
|
||||
op[k] * op[p-k] / w);
|
||||
if (std::abs(w) < apex_tol)
|
||||
{
|
||||
Nodes.IntPoint(o++).Set3(0.,0.,1.);
|
||||
}
|
||||
else
|
||||
{
|
||||
Nodes.IntPoint(o++).Set3(op[i] * (op[j] + op[p-j-k]) / w,
|
||||
op[j] * (op[i] + op[p-i-k]) / w,
|
||||
op[k] * op[p-k] / w);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@@ -1125,22 +1132,45 @@ L2_BergotPyramidElement::L2_BergotPyramidElement(const int p, const int btype)
|
||||
const real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
const real_t z = ip.z;
|
||||
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
// Compute the limit of the basis functions as z->1 with x and y on the
|
||||
// line between the center of the base and the apex
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
T(o++, m) = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
T(o++, m) = ((k + 3.) * k + 2.) / 2.;
|
||||
}
|
||||
else
|
||||
{
|
||||
T(o++, m) = 0.;
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
{
|
||||
T(o++, m) = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -1165,26 +1195,41 @@ void L2_BergotPyramidElement::CalcShape(const IntegrationPoint &ip,
|
||||
const real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
const real_t z = ip.z;
|
||||
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0), z, 1.0,
|
||||
shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
// Compute the limit of the basis functions as z->1 with x and y on the
|
||||
// line between the center of the base and the apex
|
||||
u = 0.;
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
u[o++] = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
u(o) = ((k + 3.) * k + 2.) / 2.;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
u[o++] = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
}
|
||||
}
|
||||
Ti.Mult(u, shape);
|
||||
}
|
||||
|
||||
@@ -1208,35 +1253,64 @@ void L2_BergotPyramidElement::CalcDShape(const IntegrationPoint &ip,
|
||||
const real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
const real_t z = ip.z;
|
||||
|
||||
Poly_1D::CalcLegendre(p, x, shape_x.GetData(), dshape_x.GetData());
|
||||
Poly_1D::CalcLegendre(p, y, shape_y.GetData(), dshape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0), z, 1.0,
|
||||
shape_z, dshape_z, dshape_z_dt);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
// Compute the limit of the gradients of the basis functions as
|
||||
// z->1 with x and y on the line between the center of the base and the
|
||||
// apex
|
||||
du = 0.;
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
du(o,0) = dshape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,1) = shape_x(i) * dshape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,2) = shape_x(i) * shape_y(j) * dshape_z(k) *
|
||||
pow(1.0 - ip.z, maxij) +
|
||||
(ip.x * dshape_x(i) * shape_y(j) +
|
||||
ip.y * shape_x(i) * dshape_y(j)) *
|
||||
shape_z(k) * pow(1.0 - ip.z, maxij - 2) -
|
||||
((maxij > 0) ? (maxij * shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1)) : 0.0);
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
{
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
du(o,2) = (((k + 6.) * k + 11.) * k + 6.) * k / 6.;
|
||||
}
|
||||
else if (i == 1 && j == 0)
|
||||
{
|
||||
du(o,0) = ((((k + 10.) * k + 35.) * k + 50.) * k + 24.) / 24.;
|
||||
}
|
||||
else if (i == 0 && j == 1)
|
||||
{
|
||||
du(o,1) = ((((k + 10.) * k + 35.) * k + 50.) * k + 24.) / 24.;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
Poly_1D::CalcLegendre(p, x, shape_x.GetData(), dshape_x.GetData());
|
||||
Poly_1D::CalcLegendre(p, y, shape_y.GetData(), dshape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0,
|
||||
shape_z, dshape_z, dshape_z_dt);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
{
|
||||
du(o,0) = dshape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,1) = shape_x(i) * dshape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,2) = shape_x(i) * shape_y(j) * dshape_z(k) *
|
||||
pow(1.0 - ip.z, maxij) +
|
||||
(ip.x * dshape_x(i) * shape_y(j) +
|
||||
ip.y * shape_x(i) * dshape_y(j)) *
|
||||
shape_z(k) * pow(1.0 - ip.z, maxij - 2) -
|
||||
maxij * shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
(maxij > 0 ? pow(1.0 - ip.z, maxij - 1) : 0.0);
|
||||
}
|
||||
}
|
||||
}
|
||||
Ti.Mult(du, dshape);
|
||||
}
|
||||
|
||||
|
||||
@@ -225,6 +225,8 @@ private:
|
||||
#endif
|
||||
DenseMatrixInverse Ti;
|
||||
|
||||
static constexpr real_t apex_tol = 1e-8;
|
||||
|
||||
public:
|
||||
/// Construct the L2_PyramidElement of order @a p and BasisType @a btype
|
||||
L2_BergotPyramidElement(const int p,
|
||||
|
||||
+38
-1
@@ -1282,12 +1282,49 @@ ND_SegmentElement::ND_SegmentElement(const int p, const int ob_type)
|
||||
}
|
||||
}
|
||||
|
||||
void ND_SegmentElement::CalcShape(const IntegrationPoint &ip,
|
||||
Vector &shape) const
|
||||
{
|
||||
if (obasis1d.IsIntegratedType()) { obasis1d.ScaleIntegrated(false); }
|
||||
obasis1d.Eval(ip.x, shape);
|
||||
}
|
||||
|
||||
void ND_SegmentElement::CalcVShape(const IntegrationPoint &ip,
|
||||
DenseMatrix &shape) const
|
||||
{
|
||||
Vector vshape(shape.Data(), dof);
|
||||
|
||||
obasis1d.Eval(ip.x, vshape);
|
||||
CalcShape(ip, vshape);
|
||||
}
|
||||
|
||||
void ND_SegmentElement::ProjectIntegrated(VectorCoefficient &vc,
|
||||
ElementTransformation &Trans,
|
||||
Vector &dofs) const
|
||||
{
|
||||
MFEM_ASSERT(obasis1d.IsIntegratedType(), "Not integrated type");
|
||||
real_t vk[Geometry::MaxDim];
|
||||
Vector xk(vk, vc.GetVDim());
|
||||
|
||||
const real_t *cp = poly1d.ClosedPoints(dof, BasisType::GaussLobatto);
|
||||
const IntegrationRule &ir = IntRules.Get(Geometry::SEGMENT, dof);
|
||||
IntegrationPoint ip;
|
||||
|
||||
for (int i = 0; i < dof; i++)
|
||||
{
|
||||
const real_t h = cp[i+1] - cp[i];
|
||||
real_t val = 0.0;
|
||||
|
||||
for (int q = 0; q < ir.GetNPoints(); q++)
|
||||
{
|
||||
const IntegrationPoint &ip1d = ir.IntPoint(q);
|
||||
ip.x = cp[i] + h*ip1d.x;
|
||||
Trans.SetIntPoint(&ip);
|
||||
vc.Eval(xk, Trans, ip);
|
||||
val += ip1d.weight*Trans.Jacobian().InnerProduct(tk, vk);
|
||||
}
|
||||
|
||||
dofs(i) = val*h;
|
||||
}
|
||||
}
|
||||
|
||||
const real_t ND_WedgeElement::tk[15] =
|
||||
|
||||
+10
-3
@@ -303,8 +303,7 @@ public:
|
||||
/** @brief Construct the ND_SegmentElement of order @a p and open
|
||||
BasisType @a ob_type */
|
||||
ND_SegmentElement(const int p, const int ob_type = BasisType::GaussLegendre);
|
||||
void CalcShape(const IntegrationPoint &ip, Vector &shape) const override
|
||||
{ obasis1d.Eval(ip.x, shape); }
|
||||
void CalcShape(const IntegrationPoint &ip, Vector &shape) const override;
|
||||
void CalcVShape(const IntegrationPoint &ip,
|
||||
DenseMatrix &shape) const override;
|
||||
void CalcVShape(ElementTransformation &Trans,
|
||||
@@ -325,7 +324,10 @@ public:
|
||||
using FiniteElement::Project;
|
||||
void Project(VectorCoefficient &vc,
|
||||
ElementTransformation &Trans, Vector &dofs) const override
|
||||
{ Project_ND(tk, dof2tk, vc, Trans, dofs); }
|
||||
{
|
||||
if (obasis1d.IsIntegratedType()) { ProjectIntegrated(vc, Trans, dofs); }
|
||||
else { Project_ND(tk, dof2tk, vc, Trans, dofs); }
|
||||
}
|
||||
void ProjectMatrixCoefficient(MatrixCoefficient &mc,
|
||||
ElementTransformation &T,
|
||||
Vector &dofs) const override
|
||||
@@ -338,6 +340,11 @@ public:
|
||||
ElementTransformation &Trans,
|
||||
DenseMatrix &grad) const override
|
||||
{ ProjectGrad_ND(tk, dof2tk, fe, Trans, grad); }
|
||||
|
||||
protected:
|
||||
void ProjectIntegrated(VectorCoefficient &vc,
|
||||
ElementTransformation &Trans,
|
||||
Vector &dofs) const;
|
||||
};
|
||||
|
||||
class ND_WedgeElement : public VectorFiniteElement
|
||||
|
||||
@@ -17,6 +17,12 @@
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
struct ScalarPyramid
|
||||
{
|
||||
// Default basis type for H1 and L2 pyramids
|
||||
static inline int DefaultType = 1; // Bergot(0) or Fuentes(1)
|
||||
};
|
||||
|
||||
/** Base class for arbitrary order basis functions on pyramid-shaped elements
|
||||
|
||||
This base class provides a common class to store temporary vectors,
|
||||
|
||||
+6
-16
@@ -73,16 +73,11 @@ public:
|
||||
void Project(const FiniteElement &fe, ElementTransformation &Trans,
|
||||
DenseMatrix &I) const override
|
||||
{ Project_RT(nk, dof2nk, fe, Trans, I); }
|
||||
// Gradient + rotation = Curl: H1 -> H(div)
|
||||
void ProjectGrad(const FiniteElement &fe,
|
||||
ElementTransformation &Trans,
|
||||
DenseMatrix &grad) const override
|
||||
{ ProjectGrad_RT(nk, dof2nk, fe, Trans, grad); }
|
||||
// Curl = Gradient + rotation: H1 -> H(div)
|
||||
void ProjectCurl(const FiniteElement &fe,
|
||||
ElementTransformation &Trans,
|
||||
DenseMatrix &curl) const override
|
||||
{ ProjectGrad_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
{ ProjectCurl2D_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
|
||||
void GetFaceMap(const int face_id, Array<int> &face_map) const override;
|
||||
|
||||
@@ -148,7 +143,7 @@ public:
|
||||
void ProjectCurl(const FiniteElement &fe,
|
||||
ElementTransformation &Trans,
|
||||
DenseMatrix &curl) const override
|
||||
{ ProjectCurl_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
{ ProjectCurl3D_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
|
||||
/// @brief Return the mapping from lexicographically ordered face DOFs to
|
||||
/// lexicographically ordered element DOFs corresponding to local face
|
||||
@@ -210,16 +205,11 @@ public:
|
||||
void Project(const FiniteElement &fe, ElementTransformation &Trans,
|
||||
DenseMatrix &I) const override
|
||||
{ Project_RT(nk, dof2nk, fe, Trans, I); }
|
||||
// Gradient + rotation = Curl: H1 -> H(div)
|
||||
void ProjectGrad(const FiniteElement &fe,
|
||||
ElementTransformation &Trans,
|
||||
DenseMatrix &grad) const override
|
||||
{ ProjectGrad_RT(nk, dof2nk, fe, Trans, grad); }
|
||||
// Curl = Gradient + rotation: H1 -> H(div)
|
||||
void ProjectCurl(const FiniteElement &fe,
|
||||
ElementTransformation &Trans,
|
||||
DenseMatrix &curl) const override
|
||||
{ ProjectGrad_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
{ ProjectCurl2D_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
};
|
||||
|
||||
|
||||
@@ -274,7 +264,7 @@ public:
|
||||
void ProjectCurl(const FiniteElement &fe,
|
||||
ElementTransformation &Trans,
|
||||
DenseMatrix &curl) const override
|
||||
{ ProjectCurl_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
{ ProjectCurl3D_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
};
|
||||
|
||||
class RT_WedgeElement : public VectorFiniteElement
|
||||
@@ -332,7 +322,7 @@ public:
|
||||
void ProjectCurl(const FiniteElement &fe,
|
||||
ElementTransformation &Trans,
|
||||
DenseMatrix &curl) const override
|
||||
{ ProjectCurl_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
{ ProjectCurl3D_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
};
|
||||
|
||||
/** Arbitrary order H(Div) basis functions defined on pyramid-shaped elements
|
||||
@@ -428,7 +418,7 @@ public:
|
||||
virtual void ProjectCurl(const FiniteElement &fe,
|
||||
ElementTransformation &Trans,
|
||||
DenseMatrix &curl) const
|
||||
{ ProjectCurl_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
{ ProjectCurl3D_RT(nk, dof2nk, fe, Trans, curl); }
|
||||
|
||||
void CalcRawVShape(const IntegrationPoint &ip,
|
||||
DenseMatrix &shape) const;
|
||||
|
||||
+88
-30
@@ -228,7 +228,19 @@ FiniteElementCollection *FiniteElementCollection::New(const char *name)
|
||||
}
|
||||
else if (!strncmp(name, "H1_", 3))
|
||||
{
|
||||
fec = new H1_FECollection(atoi(name + 7), atoi(name + 3));
|
||||
// Parse pyramid basis type if included in the name
|
||||
const char *pyr = strstr(name, "Pyr");
|
||||
if (pyr == NULL)
|
||||
{
|
||||
// Use default pyramid type elements
|
||||
fec = new H1_FECollection(atoi(name + 7), atoi(name + 3));
|
||||
}
|
||||
else
|
||||
{
|
||||
// Use specific pyramid type elements
|
||||
fec = new H1_FECollection(atoi(name + 7), atoi(name + 3),
|
||||
BasisType::GaussLobatto, atoi(pyr + 3));
|
||||
}
|
||||
}
|
||||
else if (!strncmp(name, "H1Pos_Trace_", 12))
|
||||
{
|
||||
@@ -245,26 +257,44 @@ FiniteElementCollection *FiniteElementCollection::New(const char *name)
|
||||
}
|
||||
else if (!strncmp(name, "H1@", 3))
|
||||
{
|
||||
fec = new H1_FECollection(atoi(name + 9), atoi(name + 5),
|
||||
BasisType::GetType(name[3]));
|
||||
// Parse pyramid basis type if included in the name
|
||||
const char *pyr = strstr(name, "Pyr");
|
||||
if (pyr == NULL)
|
||||
{
|
||||
// Use default pyramid type elements
|
||||
fec = new H1_FECollection(atoi(name + 9), atoi(name + 5),
|
||||
BasisType::GetType(name[3]));
|
||||
}
|
||||
else
|
||||
{
|
||||
// Use specific pyramid type elements
|
||||
fec = new H1_FECollection(atoi(name + 9), atoi(name + 5),
|
||||
BasisType::GetType(name[3]),
|
||||
atoi(pyr + 3));
|
||||
}
|
||||
}
|
||||
else if (!strncmp(name, "L2_T", 4))
|
||||
fec = new L2_FECollection(atoi(name + 10), atoi(name + 6),
|
||||
atoi(name + 4));
|
||||
else if (!strncmp(name, "L2_", 3))
|
||||
else if (!strncmp(name, "L2", 2))
|
||||
{
|
||||
fec = new L2_FECollection(atoi(name + 7), atoi(name + 3));
|
||||
}
|
||||
else if (!strncmp(name, "L2Int_T", 7))
|
||||
{
|
||||
fec = new L2_FECollection(atoi(name + 13), atoi(name + 9),
|
||||
atoi(name + 7), FiniteElement::INTEGRAL);
|
||||
}
|
||||
else if (!strncmp(name, "L2Int_", 6))
|
||||
{
|
||||
fec = new L2_FECollection(atoi(name + 10), atoi(name + 6),
|
||||
BasisType::GaussLegendre,
|
||||
FiniteElement::INTEGRAL);
|
||||
// Parse Map Type
|
||||
const int mtype = strstr(name, "Int") == NULL ?
|
||||
FiniteElement::VALUE : FiniteElement::INTEGRAL;
|
||||
|
||||
// Parse the base order
|
||||
const int p = atoi(strstr(name, "_P") + 2);
|
||||
|
||||
// Parse the mesh dimension
|
||||
const int dim = atoi(strstr(name, "D") - 1);
|
||||
|
||||
// Parse basis type if specified
|
||||
const char *t = strstr(name, "_T");
|
||||
const int btype = t == NULL ? BasisType::GaussLegendre : atoi(t + 2);
|
||||
|
||||
// Parse the pyramid type if specified
|
||||
const char *pyr = strstr(name, "Pyr");
|
||||
const int ptype = pyr == NULL ? 1 : atoi(pyr + 3);
|
||||
|
||||
// Create collection
|
||||
fec = new L2_FECollection(p, dim, btype, mtype, ptype);
|
||||
}
|
||||
else if (!strncmp(name, "RT_Trace_", 9))
|
||||
{
|
||||
@@ -1709,9 +1739,10 @@ const int *RT1_3DFECollection::DofOrderForOrientation(Geometry::Type GeomType,
|
||||
|
||||
|
||||
H1_FECollection::H1_FECollection(const int p, const int dim, const int btype,
|
||||
const int pyrtype)
|
||||
const int pyr_type)
|
||||
: FiniteElementCollection(p)
|
||||
, dim(dim)
|
||||
, p_type(pyr_type)
|
||||
{
|
||||
MFEM_VERIFY(p >= 1, "H1_FECollection requires order >= 1.");
|
||||
MFEM_VERIFY(dim >= 0 && dim <= 3, "H1_FECollection requires 0 <= dim <= 3.");
|
||||
@@ -1724,7 +1755,14 @@ H1_FECollection::H1_FECollection(const int p, const int dim, const int btype,
|
||||
{
|
||||
case BasisType::GaussLobatto:
|
||||
{
|
||||
snprintf(h1_name, 32, "H1_%dD_P%d", dim, p);
|
||||
if (pyr_type == ScalarPyramid::DefaultType)
|
||||
{
|
||||
snprintf(h1_name, 32, "H1_%dD_P%d", dim, p);
|
||||
}
|
||||
else
|
||||
{
|
||||
snprintf(h1_name, 32, "H1_%dD_P%d_Pyr%d", dim, p, pyr_type);
|
||||
}
|
||||
break;
|
||||
}
|
||||
case BasisType::Positive:
|
||||
@@ -1910,11 +1948,11 @@ H1_FECollection::H1_FECollection(const int p, const int dim, const int btype,
|
||||
H1_dof[Geometry::TETRAHEDRON] = (TriDof*pm3)/3;
|
||||
H1_dof[Geometry::CUBE] = QuadDof*pm1;
|
||||
H1_dof[Geometry::PRISM] = TriDof*pm1;
|
||||
if (pyrtype == 0 || b_type == BasisType::Positive)
|
||||
if (pyr_type == 0 || b_type == BasisType::Positive)
|
||||
{
|
||||
H1_dof[Geometry::PYRAMID] = pm2*pm1*(2*p-3)/6; // Bergot (JSC)
|
||||
}
|
||||
else if (pyrtype == 1)
|
||||
else if (pyr_type == 1)
|
||||
{
|
||||
H1_dof[Geometry::PYRAMID] = pm1*pm1*pm1; // Fuentes
|
||||
}
|
||||
@@ -1935,13 +1973,15 @@ H1_FECollection::H1_FECollection(const int p, const int dim, const int btype,
|
||||
new H1_TetrahedronElement(p, btype);
|
||||
H1_Elements[Geometry::CUBE] = new H1_HexahedronElement(p, btype);
|
||||
H1_Elements[Geometry::PRISM] = new H1_WedgeElement(p, btype);
|
||||
if (pyrtype == 0)
|
||||
if (pyr_type == 0)
|
||||
{
|
||||
H1_Elements[Geometry::PYRAMID] = new H1_BergotPyramidElement(p, btype);
|
||||
H1_Elements[Geometry::PYRAMID] =
|
||||
new H1_BergotPyramidElement(p, btype);
|
||||
}
|
||||
else
|
||||
{
|
||||
H1_Elements[Geometry::PYRAMID] = new H1_FuentesPyramidElement(p, btype);
|
||||
H1_Elements[Geometry::PYRAMID] =
|
||||
new H1_FuentesPyramidElement(p, btype);
|
||||
}
|
||||
}
|
||||
|
||||
@@ -2148,6 +2188,7 @@ L2_FECollection::L2_FECollection(const int p, const int dim, const int btype,
|
||||
: FiniteElementCollection(p)
|
||||
, dim(dim)
|
||||
, m_type(map_type)
|
||||
, p_type(pyr_type)
|
||||
{
|
||||
MFEM_VERIFY(p >= 0, "L2_FECollection requires order >= 0.");
|
||||
|
||||
@@ -2163,10 +2204,25 @@ L2_FECollection::L2_FECollection(const int p, const int dim, const int btype,
|
||||
switch (btype)
|
||||
{
|
||||
case BasisType::GaussLegendre:
|
||||
snprintf(d_name, 32, "%s_%dD_P%d", prefix, dim, p);
|
||||
if (pyr_type == ScalarPyramid::DefaultType)
|
||||
{
|
||||
snprintf(d_name, 32, "%s_%dD_P%d", prefix, dim, p);
|
||||
}
|
||||
else
|
||||
{
|
||||
snprintf(d_name, 32, "%s_%dD_P%d_Pyr%d", prefix, dim, p, pyr_type);
|
||||
}
|
||||
break;
|
||||
default:
|
||||
snprintf(d_name, 32, "%s_T%d_%dD_P%d", prefix, btype, dim, p);
|
||||
if (pyr_type == ScalarPyramid::DefaultType)
|
||||
{
|
||||
snprintf(d_name, 32, "%s_T%d_%dD_P%d", prefix, btype, dim, p);
|
||||
}
|
||||
else
|
||||
{
|
||||
snprintf(d_name, 32, "%s_T%d_%dD_P%d_Pyr%d",
|
||||
prefix, btype, dim, p, pyr_type);
|
||||
}
|
||||
}
|
||||
|
||||
for (int g = 0; g < Geometry::NumGeom; g++)
|
||||
@@ -2285,11 +2341,13 @@ L2_FECollection::L2_FECollection(const int p, const int dim, const int btype,
|
||||
L2_Elements[Geometry::PRISM] = new L2_WedgeElement(p, btype);
|
||||
if (pyr_type == 0)
|
||||
{
|
||||
L2_Elements[Geometry::PYRAMID] = new L2_BergotPyramidElement(p, btype);
|
||||
L2_Elements[Geometry::PYRAMID] =
|
||||
new L2_BergotPyramidElement(p, btype);
|
||||
}
|
||||
else
|
||||
{
|
||||
L2_Elements[Geometry::PYRAMID] = new L2_FuentesPyramidElement(p, btype);
|
||||
L2_Elements[Geometry::PYRAMID] =
|
||||
new L2_FuentesPyramidElement(p, btype);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
+10
-5
@@ -100,6 +100,10 @@ public:
|
||||
return FiniteElementForGeometry(GeomType);
|
||||
}
|
||||
|
||||
/** @brief Returns a collection of the trace elements.
|
||||
|
||||
@note The collection is owned by the caller and is NOT deleted in the
|
||||
destructor. */
|
||||
virtual FiniteElementCollection *GetTraceCollection() const;
|
||||
|
||||
virtual ~FiniteElementCollection();
|
||||
@@ -286,7 +290,7 @@ protected:
|
||||
class H1_FECollection : public FiniteElementCollection
|
||||
{
|
||||
protected:
|
||||
int dim, b_type;
|
||||
int dim, b_type, p_type;
|
||||
char h1_name[32];
|
||||
FiniteElement *H1_Elements[Geometry::NumGeom];
|
||||
int H1_dof[Geometry::NumGeom];
|
||||
@@ -295,7 +299,7 @@ protected:
|
||||
public:
|
||||
explicit H1_FECollection(const int p, const int dim = 3,
|
||||
const int btype = BasisType::GaussLobatto,
|
||||
const int pyrtype = 1);
|
||||
const int pyr_type = ScalarPyramid::DefaultType);
|
||||
|
||||
const FiniteElement *
|
||||
FiniteElementForGeometry(Geometry::Type GeomType) const override;
|
||||
@@ -320,7 +324,7 @@ public:
|
||||
const int *GetDofMap(Geometry::Type GeomType, int p) const;
|
||||
|
||||
FiniteElementCollection *Clone(int p) const override
|
||||
{ return new H1_FECollection(p, dim, b_type); }
|
||||
{ return new H1_FECollection(p, dim, b_type, p_type); }
|
||||
|
||||
int GetConstructorOrder() const override
|
||||
{ return base_p; }
|
||||
@@ -367,6 +371,7 @@ private:
|
||||
int dim;
|
||||
int b_type; // BasisType
|
||||
int m_type; // map type
|
||||
int p_type; // Pyramid type (0 -> Bergot, 1 -> Fuentes)
|
||||
char d_name[32];
|
||||
ScalarFiniteElement *L2_Elements[Geometry::NumGeom];
|
||||
ScalarFiniteElement *Tr_Elements[Geometry::NumGeom];
|
||||
@@ -379,7 +384,7 @@ public:
|
||||
L2_FECollection(const int p, const int dim,
|
||||
const int btype = BasisType::GaussLegendre,
|
||||
const int map_type = FiniteElement::VALUE,
|
||||
const int pyrtype = 1);
|
||||
const int pyr_type = ScalarPyramid::DefaultType);
|
||||
|
||||
const FiniteElement *
|
||||
FiniteElementForGeometry(Geometry::Type GeomType) const override;
|
||||
@@ -409,7 +414,7 @@ public:
|
||||
int GetBasisType() const { return b_type; }
|
||||
|
||||
FiniteElementCollection *Clone(int p) const override
|
||||
{ return new L2_FECollection(p, dim, b_type, m_type); }
|
||||
{ return new L2_FECollection(p, dim, b_type, m_type, p_type); }
|
||||
|
||||
int GetConstructorOrder() const override
|
||||
{ return base_p; }
|
||||
|
||||
+1236
-728
File diff suppressed because it is too large
Load Diff
+166
-51
@@ -12,6 +12,9 @@
|
||||
#ifndef MFEM_GSLIB
|
||||
#define MFEM_GSLIB
|
||||
|
||||
#include <map>
|
||||
#include <vector>
|
||||
|
||||
#include "../config/config.hpp"
|
||||
#ifdef MFEM_USE_MPI
|
||||
#include "pgridfunc.hpp"
|
||||
@@ -119,6 +122,11 @@ protected:
|
||||
// IntegrationRules for simplex->Quad/Hex and to project to p_max in-case of
|
||||
// p-refinement.
|
||||
Array<IntegrationRule *> ir_split;
|
||||
/// Integration rules built at the field polynomial order (only for surface
|
||||
/// meshes when mesh order is not the same as gridfunction order).
|
||||
Array<IntegrationRule *> ir_split_sol;
|
||||
/// Order at which #ir_split_sol was built; -1 means not built.
|
||||
int ir_split_sol_order = -1;
|
||||
Array<FiniteElementSpace *> fes_rst_map; //FESpaces to map Quad/Hex->Simplex
|
||||
Array<GridFunction *> gf_rst_map; // GridFunctions to map Quad/Hex->Simplex
|
||||
FiniteElementCollection *fec_map_lin;
|
||||
@@ -134,6 +142,8 @@ protected:
|
||||
AvgType avgtype; // average type used for L2 functions
|
||||
Array<int> split_element_map;
|
||||
Array<int> split_element_index;
|
||||
// Geometry::Type (as int) of the original element for each split quad.
|
||||
Array<int> split_element_geom;
|
||||
int NE_split_total; // total number of elements after mesh splitting
|
||||
int mesh_points_cnt; // number of mesh nodes
|
||||
// Tolerance to ignore points found beyond the mesh boundary.
|
||||
@@ -141,6 +151,12 @@ protected:
|
||||
double bdr_tol;
|
||||
// Use CPU functions for Mesh/GridFunction on device for gslib1.0.7
|
||||
bool gpu_to_cpu_fallback = false;
|
||||
// Check if a point is inside the oriented bounding box of an
|
||||
// element before the Newton iteration.
|
||||
// Note: only used in MFEM implementation (not in gslib) which currently
|
||||
// supports GPU kernels for area meshes in 2D, volume meshes in 3D,
|
||||
// and surface meshes in 1D/2D/3D.
|
||||
bool obb_check = true;
|
||||
|
||||
// Device specific data used for FindPoints
|
||||
struct DEV_STRUCT
|
||||
@@ -162,11 +178,16 @@ protected:
|
||||
mutable double surf_dist_tol;
|
||||
} DEV;
|
||||
|
||||
/// Use GSLIB for communication and interpolation
|
||||
// Helper function to setup and free gslib's crystal router.
|
||||
void SetupCrystal(); // Called inside Setup and SetupSurf_base
|
||||
void FreeCrystal(); // Called inside FreeData
|
||||
|
||||
/// Use GSLIB for communication and interpolation. Updates field_out on
|
||||
/// host.
|
||||
virtual void InterpolateH1(const GridFunction &field_in, Vector &field_out,
|
||||
const int field_out_ordering);
|
||||
/// Uses GSLIB Crystal Router for communication followed by MFEM's
|
||||
/// interpolation functions
|
||||
/// interpolation functions. Updates field_out on host.
|
||||
virtual void InterpolateGeneral(const GridFunction &field_in,
|
||||
Vector &field_out,
|
||||
const int field_out_ordering);
|
||||
@@ -181,12 +202,26 @@ protected:
|
||||
IntegrationRule *irule,
|
||||
int order);
|
||||
|
||||
/** @brief Build integration rules at the given @a order for each split mesh
|
||||
* and store them in @a ir_out. Requires that \ref SetupSplitMeshes has
|
||||
* already been called. */
|
||||
virtual void SetupIntegrationRules(const int order,
|
||||
Array<IntegrationRule *> &ir_out);
|
||||
|
||||
/** @brief Helper function that calls \ref SetupSplitMeshes and
|
||||
* \ref SetupIntegrationRuleForSplitMesh. */
|
||||
* \ref SetupIntegrationRules. */
|
||||
virtual void SetupSplitMeshesAndIntegrationRules(const int order);
|
||||
|
||||
/// Get GridFunction value at the points expected by GSLIB.
|
||||
virtual void GetNodalValues(const GridFunction *gf_in, Vector &node_vals) const;
|
||||
/** @brief Get GridFunction value at the points expected by GSLIB.
|
||||
* @param[in] gf_in Grid function to evaluate.
|
||||
* @param[out] node_vals Output values.
|
||||
* @param[in] ir_in If non-null, use these rules instead of #ir_split.
|
||||
* @param[in] by_element If true, output has element-major layout
|
||||
* [nel][vdim][ndofs]; otherwise component-major
|
||||
* layout [vdim][total_pts]. */
|
||||
virtual void GetNodalValues(const GridFunction *gf_in, Vector &node_vals,
|
||||
const Array<IntegrationRule *> *ir_in = nullptr,
|
||||
bool by_element = false) const;
|
||||
|
||||
/** @brief Map {r,s,t} coordinates from [-1,1] to [0,1] for MFEM. For
|
||||
* simplices, find the original element number (that was split into
|
||||
@@ -291,29 +326,60 @@ protected:
|
||||
void findptsedge_setup_2(DEV_STRUCT &devs,
|
||||
const double *const elx[2],
|
||||
const unsigned n,
|
||||
const uint nel,
|
||||
const unsigned int nel,
|
||||
const unsigned m,
|
||||
const double bbox_tol,
|
||||
const uint local_hash_size,
|
||||
const uint global_hash_size);
|
||||
const double bbox_rel_size_inc,
|
||||
const unsigned int local_hash_size,
|
||||
const unsigned int global_hash_size,
|
||||
const Vector *aabb_sz_inc);
|
||||
|
||||
/// Preprocess 3D surface mesh needed for FindPoints.
|
||||
void findptssurf_setup_3(DEV_STRUCT &devs,
|
||||
const double *const elx[3],
|
||||
const unsigned n,
|
||||
const uint nel,
|
||||
const unsigned int nel,
|
||||
const unsigned m,
|
||||
const double bbox_tol,
|
||||
const uint local_hash_size,
|
||||
const uint global_hash_size,
|
||||
const int rD);
|
||||
const double bbox_rel_size_inc,
|
||||
const unsigned int local_hash_size,
|
||||
const unsigned int global_hash_size,
|
||||
const int rD,
|
||||
const Vector *aabb_sz_inc);
|
||||
|
||||
/** @brief Shared implementation for the public surface-setup methods.
|
||||
*
|
||||
* @details Initializes the surface-search data structures, builds the
|
||||
* split-element representation expected by gslib, and constructs the
|
||||
* element bounding boxes used by the MFEM surface kernels.
|
||||
*
|
||||
* If @a aabb_sz_inc is null, the setup stores the default oriented
|
||||
* bounding boxes and uses @a bbox_rel_size_inc as their relative size
|
||||
* increase factor.
|
||||
*
|
||||
* If @a aabb_sz_inc is non-null, the setup stores axis-aligned bounding
|
||||
* boxes only, applies the requested absolute AABB expansion in each
|
||||
* physical direction, and adjusts the tolerance @a bdr_tol so points
|
||||
* found in the expanded region are classified as border points.
|
||||
*
|
||||
* @param[in] m Input surface mesh.
|
||||
* @param[in] bbox_rel_size_inc Relative size increase applied when
|
||||
* expanding each element bounding box during
|
||||
* setup.
|
||||
* @param[in] aabb_sz_inc Optional total absolute AABB expansion
|
||||
* applied to the stored axis-aligned
|
||||
* bounding boxes after construction.
|
||||
* @param[in] newt_tol Newton tolerance for the point-search
|
||||
* kernels.
|
||||
*/
|
||||
void SetupSurf_Base(Mesh &m,
|
||||
const double bbox_rel_size_inc,
|
||||
const Vector *aabb_sz_inc,
|
||||
const double newt_tol);
|
||||
public:
|
||||
/// Serial constructor
|
||||
FindPointsGSLIB();
|
||||
|
||||
/// Serial constructor + setup with given Mesh (see \ref Setup)
|
||||
FindPointsGSLIB(Mesh &mesh_in, const double bb_t = 0.1,
|
||||
FindPointsGSLIB(Mesh &mesh_in, const double bbox_rel_size_inc = 0.1,
|
||||
const double newt_tol = 1.0e-12,
|
||||
const int npt_max = 256);
|
||||
|
||||
@@ -322,7 +388,7 @@ public:
|
||||
FindPointsGSLIB(MPI_Comm comm_);
|
||||
|
||||
/// Constructor + setup with given ParMesh (see \ref Setup)
|
||||
FindPointsGSLIB(ParMesh &mesh_in, const double bb_t = 0.1,
|
||||
FindPointsGSLIB(ParMesh &mesh_in, const double bbox_rel_size_inc = 0.1,
|
||||
const double newt_tol = 1.0e-12,
|
||||
const int npt_max = 256);
|
||||
#endif
|
||||
@@ -338,23 +404,59 @@ public:
|
||||
Note: not tested with periodic (L2).
|
||||
Note: the input mesh \p m must have Nodes set.
|
||||
|
||||
@param[in] m Input mesh.
|
||||
@param[in] bb_t (Optional) Relative size of bounding box around
|
||||
each element.
|
||||
@param[in] newt_tol (Optional) Newton tolerance for the gslib
|
||||
search methods.
|
||||
@param[in] npt_max (Optional) Number of points for simultaneous
|
||||
iteration. This alters performance and
|
||||
memory footprint.
|
||||
@param[in] m Input mesh.
|
||||
@param[in] bbox_rel_size_inc (Optional) Relative size increase applied
|
||||
when expanding each element bounding box.
|
||||
@param[in] newt_tol (Optional) Newton tolerance for the gslib
|
||||
search methods.
|
||||
@param[in] npt_max (Optional) Number of points for
|
||||
simultaneous iteration. This alters
|
||||
performance and memory footprint.
|
||||
*/
|
||||
void Setup(Mesh &m, const double bb_t = 0.1, const double newt_tol = 1.0e-12,
|
||||
void Setup(Mesh &m, const double bbox_rel_size_inc = 0.1,
|
||||
const double newt_tol = 1.0e-12,
|
||||
const int npt_max = 256);
|
||||
|
||||
/// Preprocess the surface mesh to compute data for FindPoints.
|
||||
void SetupSurf(Mesh &m,
|
||||
const double bb_t = 0.1,
|
||||
const double newt_tol = 1.0e-12,
|
||||
const int npt_max = 256);
|
||||
const double bbox_rel_size_inc = 0.1,
|
||||
const double newt_tol = 1.0e-12);
|
||||
|
||||
/** @brief Preprocess the surface mesh to compute data for FindPoints using
|
||||
* absolute AABB expansion.
|
||||
*
|
||||
* @details This method computes only axis-aligned bounding boxes and
|
||||
* increases their total length by a user-specified amount in each
|
||||
* physical direction. The absolute AABB expansion is applied
|
||||
* symmetrically to the lower and upper bounds.
|
||||
*
|
||||
* The size of @a aabb_sz_inc determines how the expansion values are
|
||||
* interpreted:
|
||||
* - `1`: one expansion value used in every direction for every element
|
||||
* - `NElements`: one expansion value per element, reused in x/y/z
|
||||
* directions
|
||||
* - `SpaceDim`: one expansion value per physical direction, reused for
|
||||
* every element
|
||||
* - `NElements*SpaceDim`: one expansion value per element and direction,
|
||||
* ordered as `(dx1,dy1,dz1, ... dxN,dyN,dzN)`
|
||||
*
|
||||
* This method disables the oriented bounding-box precheck because the
|
||||
* stored boxes are modified only in their axis-aligned representation.
|
||||
*
|
||||
* @param[in] m Input surface mesh.
|
||||
* @param[in] aabb_sz_inc Total absolute AABB expansion applied in
|
||||
* each physical direction to the stored
|
||||
* axis-aligned bounding boxes.
|
||||
* @param[in] newt_tol Newton tolerance for the point-search
|
||||
* kernels.
|
||||
*
|
||||
* @note We disable the oriented bounding box check with this setup.
|
||||
* @a bdr_tol is also adjusted so that all points in the AABBs can
|
||||
* be found.
|
||||
*/
|
||||
void SetupSurfWithAABBExpansion(Mesh &m, const Vector &aabb_sz_inc,
|
||||
const double newt_tol = 1.0e-12);
|
||||
|
||||
|
||||
/** @brief Searches positions given in physical space by \p point_pos.
|
||||
|
||||
@@ -401,7 +503,8 @@ public:
|
||||
/// Setup FindPoints and search positions
|
||||
void FindPoints(Mesh &m, const Vector &point_pos,
|
||||
const int point_pos_ordering = Ordering::byNODES,
|
||||
const double bb_t = 0.1, const double newt_tol = 1.0e-12,
|
||||
const double bbox_rel_size_inc = 0.1,
|
||||
const double newt_tol = 1.0e-12,
|
||||
const int npt_max = 256);
|
||||
|
||||
/** @brief Interpolation of field values at prescribed reference space
|
||||
@@ -413,7 +516,11 @@ public:
|
||||
mesh that was given to Setup().
|
||||
@param[out] field_out Interpolated values. For points that are not found
|
||||
the value is set to #default_interp_value.
|
||||
The output ordering is determined from field_in.*/
|
||||
The output ordering is determined from field_in.
|
||||
|
||||
@note: field_out is moved to device if field_in is on device. Otherwise,
|
||||
field_out memory allocation is not changed.
|
||||
*/
|
||||
virtual void Interpolate(const GridFunction &field_in, Vector &field_out);
|
||||
|
||||
/// Interpolation of field values, with output ordering specification.
|
||||
@@ -468,7 +575,12 @@ public:
|
||||
* @details When using FindPoints, gslib may return points as found on the
|
||||
* boundary even when they are slightly outside the domain. This tolerance
|
||||
* is used to filter such points based on the distance^2 value and mark them
|
||||
* as not found.*/
|
||||
* as not found.
|
||||
*
|
||||
* @note When the SetupSurfWithAABBExpansion method is used for surface
|
||||
* meshes, this tolerance is automatically computed based on the size of
|
||||
* expanded AABBs. Using this method will override that computed tolerance.
|
||||
* */
|
||||
virtual void SetDistanceToleranceForPointsFoundOnBoundary(double bdr_tol_)
|
||||
{
|
||||
bdr_tol = bdr_tol_;
|
||||
@@ -603,25 +715,28 @@ public:
|
||||
Note: not tested with periodic meshes (L2).
|
||||
Note: the input mesh \p m must have Nodes set.
|
||||
|
||||
@param[in] m Input mesh.
|
||||
@param[in] meshid A unique # for each overlapping mesh. This id is
|
||||
used to make sure that points being searched are not
|
||||
looked for in the mesh that they belong to.
|
||||
@param[in] gfmax (Optional) GridFunction in H1 that is used as a
|
||||
discriminator when one point is located in multiple
|
||||
meshes. The mesh that maximizes gfmax is chosen.
|
||||
For example, using the distance field based on the
|
||||
overlapping boundaries is helpful for convergence
|
||||
during Schwarz iterations.
|
||||
@param[in] bb_t (Optional) Relative size of bounding box around
|
||||
each element.
|
||||
@param[in] newt_tol (Optional) Newton tolerance for the gslib
|
||||
search methods.
|
||||
@param[in] npt_max (Optional) Number of points for simultaneous
|
||||
iteration. This alters performance and
|
||||
memory footprint.*/
|
||||
void Setup(Mesh &m, const int meshid, GridFunction *gfmax = NULL,
|
||||
const double bb_t = 0.1, const double newt_tol = 1.0e-12,
|
||||
@param[in] m Input mesh.
|
||||
@param[in] meshid A unique # for each overlapping mesh.
|
||||
This id is used to make sure that points
|
||||
being searched are not looked for in the
|
||||
mesh that they belong to.
|
||||
@param[in] gfmax (Optional) GridFunction in H1 that is used
|
||||
as a discriminator when one point is
|
||||
located in multiple meshes. The mesh that
|
||||
maximizes gfmax is chosen. For example,
|
||||
using the distance field based on the
|
||||
overlapping boundaries is helpful for
|
||||
convergence during Schwarz iterations.
|
||||
@param[in] bbox_rel_size_inc (Optional) Relative size increase applied
|
||||
when expanding each element bounding box.
|
||||
@param[in] newt_tol (Optional) Newton tolerance for the gslib
|
||||
search methods.
|
||||
@param[in] npt_max (Optional) Number of points for
|
||||
simultaneous iteration. This alters
|
||||
performance and memory footprint.*/
|
||||
void Setup(Mesh &m, const int meshid, GridFunction *gfmax = nullptr,
|
||||
const double bbox_rel_size_inc = 0.1,
|
||||
const double newt_tol = 1.0e-12,
|
||||
const int npt_max = 256);
|
||||
|
||||
/** Searches positions given in physical space by \p point_pos. All output
|
||||
@@ -677,7 +792,7 @@ class GSOPGSLIB
|
||||
protected:
|
||||
struct gslib::crystal *cr; // gslib's internal data
|
||||
struct gslib::comm *gsl_comm; // gslib's internal data
|
||||
struct gslib::gs_data *gsl_data = NULL;
|
||||
struct gslib::gs_data *gsl_data = nullptr;
|
||||
int num_ids;
|
||||
|
||||
public:
|
||||
|
||||
+64
-170
@@ -11,7 +11,7 @@
|
||||
|
||||
#include "../gslib.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/kernels.hpp"
|
||||
#include "gslib_kernel_helpers.hpp"
|
||||
|
||||
#ifdef MFEM_USE_GSLIB
|
||||
|
||||
@@ -27,8 +27,6 @@
|
||||
#pragma GCC diagnostic pop
|
||||
#endif
|
||||
|
||||
#include <climits>
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
#if GSLIB_RELEASE_VERSION >= 10009
|
||||
@@ -54,127 +52,14 @@ struct findptsElementGPT_t
|
||||
double x[DIM], jac[DIM * DIM], hes[4];
|
||||
};
|
||||
|
||||
struct dbl_range_t
|
||||
{
|
||||
double min, max;
|
||||
};
|
||||
struct obbox_t
|
||||
{
|
||||
double c0[DIM], A[DIM * DIM];
|
||||
dbl_range_t x[DIM];
|
||||
};
|
||||
|
||||
struct findptsLocalHashData_t
|
||||
{
|
||||
int hash_n;
|
||||
dbl_range_t bnd[DIM];
|
||||
double fac[DIM];
|
||||
unsigned int *offset;
|
||||
int max;
|
||||
};
|
||||
|
||||
// Eval the ith Lagrange interpolant and its first derivative at x.
|
||||
// Note: lCoeff stores pre-computed coefficients for fast evaluation.
|
||||
static MFEM_HOST_DEVICE inline void lag_eval_first_der(double *p0, double x,
|
||||
int i, const double *z,
|
||||
const double *lCoeff,
|
||||
int pN)
|
||||
{
|
||||
double u0 = 1, u1 = 0;
|
||||
for (int j = 0; j < pN; ++j)
|
||||
{
|
||||
if (i != j)
|
||||
{
|
||||
double d_j = 2 * (x - z[j]);
|
||||
u1 = d_j * u1 + u0;
|
||||
u0 = d_j * u0;
|
||||
}
|
||||
}
|
||||
p0[i] = lCoeff[i] * u0;
|
||||
p0[pN+i] = 2.0 * lCoeff[i] * u1;
|
||||
}
|
||||
|
||||
// Eval the ith Lagrange interpolant and its first and second derivative at x.
|
||||
// Note: lCoeff stores pre-computed coefficients for fast evaluation.
|
||||
static MFEM_HOST_DEVICE inline void lag_eval_second_der(double *p0, double x,
|
||||
int i, const double *z,
|
||||
const double *lCoeff,
|
||||
int pN)
|
||||
{
|
||||
double u0 = 1, u1 = 0, u2 = 0;
|
||||
for (int j = 0; j < pN; ++j)
|
||||
{
|
||||
if (i != j)
|
||||
{
|
||||
double d_j = 2 * (x - z[j]);
|
||||
u2 = d_j * u2 + u1;
|
||||
u1 = d_j * u1 + u0;
|
||||
u0 = d_j * u0;
|
||||
}
|
||||
}
|
||||
p0[i] = lCoeff[i] * u0;
|
||||
p0[pN+i] = 2.0 * lCoeff[i] * u1;
|
||||
p0[2*pN+i] = 8.0 * lCoeff[i] * u2;
|
||||
}
|
||||
|
||||
// Axis-aligned bounding box test.
|
||||
static MFEM_HOST_DEVICE inline double AABB_test(const obbox_t *const b,
|
||||
const double x[2])
|
||||
{
|
||||
double test = 1;
|
||||
for (int d = 0; d < 2; ++d)
|
||||
{
|
||||
double b_d = (x[d] - b->x[d].min) * (b->x[d].max - x[d]);
|
||||
test = test < 0 ? test : b_d;
|
||||
}
|
||||
return test;
|
||||
}
|
||||
|
||||
// Axis-aligned bounding box test followed by oriented bounding-box test.
|
||||
static MFEM_HOST_DEVICE inline double bbox_test(const obbox_t *const b,
|
||||
const double x[2])
|
||||
{
|
||||
const double bxyz = AABB_test(b, x);
|
||||
if (bxyz < 0)
|
||||
{
|
||||
return bxyz;
|
||||
}
|
||||
else
|
||||
{
|
||||
double dxyz[2];
|
||||
for (int d = 0; d < 2; ++d)
|
||||
{
|
||||
dxyz[d] = x[d] - b->c0[d];
|
||||
}
|
||||
double test = 1;
|
||||
for (int d = 0; d < 2; ++d)
|
||||
{
|
||||
double rst = 0;
|
||||
for (int e = 0; e < 2; ++e)
|
||||
{
|
||||
rst += b->A[d * 2 + e] * dxyz[e];
|
||||
}
|
||||
double brst = (rst + 1) * (1 - rst);
|
||||
test = test < 0 ? test : brst;
|
||||
}
|
||||
return test;
|
||||
}
|
||||
}
|
||||
|
||||
// Element index corresponding to hash mesh that the point is located in.
|
||||
static MFEM_HOST_DEVICE inline int hash_index(const findptsLocalHashData_t *p,
|
||||
const double x[2])
|
||||
{
|
||||
const int n = p->hash_n;
|
||||
int sum = 0;
|
||||
for (int d = 2 - 1; d >= 0; --d)
|
||||
{
|
||||
sum *= n;
|
||||
int i = (int)floor((x[d] - p->bnd[d].min) * p->fac[d]);
|
||||
sum += i < 0 ? 0 : (n - 1 < i ? n - 1 : i);
|
||||
}
|
||||
return sum;
|
||||
}
|
||||
using dbl_range_t = gslib::dbl_range_t;
|
||||
using obbox_t = gslib::obbox_t<DIM>;
|
||||
using findptsLocalHashData_t = gslib::findptsLocalHashData_t<DIM>;
|
||||
using gslib::bbox_test;
|
||||
using gslib::hash_index;
|
||||
using gslib::l2norm2;
|
||||
using gslib::lag_eval_first_der;
|
||||
using gslib::lag_eval_second_der;
|
||||
|
||||
/*Solve Ax=y. A is row-major */
|
||||
static MFEM_HOST_DEVICE inline void lin_solve_2(double x[2], const double A[4],
|
||||
@@ -185,12 +70,6 @@ static MFEM_HOST_DEVICE inline void lin_solve_2(double x[2], const double A[4],
|
||||
x[1] = idet*(A[0]*y[1] - A[2]*y[0]);
|
||||
}
|
||||
|
||||
/* L2 norm squared. */
|
||||
static MFEM_HOST_DEVICE inline double l2norm2(const double x[2])
|
||||
{
|
||||
return x[0] * x[0] + x[1] * x[1];
|
||||
}
|
||||
|
||||
/* the bit structure of flags is CSSRR
|
||||
the C bit --- 1<<4 --- is set when the point is converged
|
||||
RR is 0 = 00b if r is unconstrained,
|
||||
@@ -352,7 +231,7 @@ static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *res,
|
||||
const findptsElementPoint_t *p,
|
||||
const double tol)
|
||||
{
|
||||
const double dist2 = l2norm2(resid);
|
||||
const double dist2 = l2norm2<2>(resid);
|
||||
const double decr = p->dist2 - dist2;
|
||||
const double pred = p->dist2p;
|
||||
for (int d = 0; d < 2; ++d)
|
||||
@@ -695,25 +574,25 @@ static MFEM_HOST_DEVICE double tensor_ig2_j(double *g_partials,
|
||||
}
|
||||
|
||||
template<int T_D1D = 0>
|
||||
static void FindPointsLocal2D_Kernel(const int npt,
|
||||
const double tol,
|
||||
const double *x,
|
||||
const int point_pos_ordering,
|
||||
const double *xElemCoord,
|
||||
const int nel,
|
||||
const double *wtend,
|
||||
const double *boxinfo,
|
||||
const int hash_n,
|
||||
const double *hashMin,
|
||||
const double *hashFac,
|
||||
unsigned int *hashOffset,
|
||||
unsigned int *const code_base,
|
||||
unsigned int *const el_base,
|
||||
double *const r_base,
|
||||
double *const dist2_base,
|
||||
const double *gll1D,
|
||||
const double *lagcoeff,
|
||||
const int pN = 0)
|
||||
static void FindPointsLocal2DKernel(const int npt,
|
||||
const double tol,
|
||||
const double *x,
|
||||
const int point_pos_ordering,
|
||||
const double *xElemCoord,
|
||||
const int nel,
|
||||
const double *wtend,
|
||||
const double *boxinfo,
|
||||
const int hash_n,
|
||||
const double *hashMin,
|
||||
const double *hashFac,
|
||||
unsigned int *hashOffset,
|
||||
unsigned int *const code_base,
|
||||
unsigned int *const el_base,
|
||||
double *const r_base,
|
||||
double *const dist2_base,
|
||||
const double *gll1D,
|
||||
const double *lagcoeff,
|
||||
const int pN = 0)
|
||||
{
|
||||
const int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
const int D1D = T_D1D ? T_D1D : pN;
|
||||
@@ -1175,30 +1054,45 @@ void FindPointsGSLIB::FindPointsLocal2(const Vector &point_pos,
|
||||
switch (DEV.dof1d)
|
||||
{
|
||||
case 2:
|
||||
return FindPointsLocal2D_Kernel<2>(
|
||||
npt, DEV.newt_tol, pp, point_pos_ordering, pgslm, NE_split_total, pwt,
|
||||
pbb, DEV.lh_nx, plhm, plhf, plho, pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
FindPointsLocal2DKernel<2>(npt, DEV.newt_tol, pp,
|
||||
point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
case 3:
|
||||
return FindPointsLocal2D_Kernel<3>(
|
||||
npt, DEV.newt_tol, pp, point_pos_ordering, pgslm, NE_split_total, pwt,
|
||||
pbb, DEV.lh_nx, plhm, plhf, plho, pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
FindPointsLocal2DKernel<3>(npt, DEV.newt_tol, pp,
|
||||
point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
case 4:
|
||||
return FindPointsLocal2D_Kernel<4>(
|
||||
npt, DEV.newt_tol, pp, point_pos_ordering, pgslm, NE_split_total, pwt,
|
||||
pbb, DEV.lh_nx, plhm, plhf, plho, pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
FindPointsLocal2DKernel<4>(npt, DEV.newt_tol, pp,
|
||||
point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
case 5:
|
||||
return FindPointsLocal2D_Kernel<5>(
|
||||
npt, DEV.newt_tol, pp, point_pos_ordering, pgslm, NE_split_total, pwt,
|
||||
pbb, DEV.lh_nx, plhm, plhf, plho, pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
FindPointsLocal2DKernel<5>(npt, DEV.newt_tol, pp,
|
||||
point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
default:
|
||||
return FindPointsLocal2D_Kernel(npt, DEV.newt_tol, pp, point_pos_ordering,
|
||||
pgslm, NE_split_total, pwt, pbb, DEV.lh_nx,
|
||||
plhm, plhf, plho, pcode, pelem,
|
||||
pref, pdist, pgll1d, plc, DEV.dof1d);
|
||||
FindPointsLocal2DKernel(npt, DEV.newt_tol, pp,
|
||||
point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc, DEV.dof1d);
|
||||
break;
|
||||
}
|
||||
}
|
||||
#undef DIM2
|
||||
|
||||
+29
-157
@@ -11,9 +11,7 @@
|
||||
|
||||
#include "../gslib.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/kernels.hpp"
|
||||
|
||||
#include <climits>
|
||||
#include "gslib_kernel_helpers.hpp"
|
||||
|
||||
#ifdef MFEM_USE_GSLIB
|
||||
|
||||
@@ -59,128 +57,15 @@ struct findptsElemPt
|
||||
double x[DIM], jac[DIM * DIM], hes[18];
|
||||
};
|
||||
|
||||
struct dbl_range_t
|
||||
{
|
||||
double min, max;
|
||||
};
|
||||
|
||||
struct obbox_t
|
||||
{
|
||||
double c0[DIM], A[DIM * DIM];
|
||||
dbl_range_t x[DIM];
|
||||
};
|
||||
|
||||
struct findptsLocalHashData_t
|
||||
{
|
||||
int hash_n;
|
||||
dbl_range_t bnd[DIM];
|
||||
double fac[DIM];
|
||||
unsigned int *offset;
|
||||
// int max;
|
||||
};
|
||||
|
||||
// Eval the ith Lagrange interpolant and its first derivative at x.
|
||||
// Note: lCoeff stores pre-computed coefficients for fast evaluation.
|
||||
static MFEM_HOST_DEVICE inline void lag_eval_first_der(double *p0, double x,
|
||||
int i, const double *z,
|
||||
const double *lCoeff,
|
||||
int pN)
|
||||
{
|
||||
double u0 = 1, u1 = 0;
|
||||
for (int j = 0; j < pN; ++j)
|
||||
{
|
||||
if (i != j)
|
||||
{
|
||||
double d_j = 2*(x-z[j]);
|
||||
u1 = d_j*u1+u0;
|
||||
u0 = d_j*u0;
|
||||
}
|
||||
}
|
||||
p0[i] = lCoeff[i]*u0;
|
||||
p0[pN+i] = 2.0*lCoeff[i]*u1;
|
||||
}
|
||||
|
||||
// Eval the ith Lagrange interpolant and its first and second derivative at x.
|
||||
// Note: lCoeff stores pre-computed coefficients for fast evaluation.
|
||||
static MFEM_HOST_DEVICE inline void lag_eval_second_der(double *p0, double x,
|
||||
int i, const double *z,
|
||||
const double *lCoeff,
|
||||
int pN)
|
||||
{
|
||||
double u0 = 1, u1 = 0, u2 = 0;
|
||||
for (int j = 0; j < pN; ++j)
|
||||
{
|
||||
if (i != j)
|
||||
{
|
||||
double d_j = 2*(x-z[j]);
|
||||
u2 = d_j*u2+u1;
|
||||
u1 = d_j*u1+u0;
|
||||
u0 = d_j*u0;
|
||||
}
|
||||
}
|
||||
p0[i] = lCoeff[i]*u0;
|
||||
p0[pN+i] = 2.0*lCoeff[i]*u1;
|
||||
p0[2*pN+i] = 8.0*lCoeff[i]*u2;
|
||||
}
|
||||
|
||||
// Axis-aligned bounding box test.
|
||||
static MFEM_HOST_DEVICE inline double AABB_test(const obbox_t *const b,
|
||||
const double x[3])
|
||||
{
|
||||
double b_d;
|
||||
for (int d = 0; d < 3; ++d)
|
||||
{
|
||||
b_d = (x[d]-b->x[d].min)*(b->x[d].max-x[d]);
|
||||
if (b_d < 0) { return b_d; }
|
||||
}
|
||||
return b_d;
|
||||
}
|
||||
|
||||
// Axis-aligned bounding box test followed by oriented bounding-box test.
|
||||
static MFEM_HOST_DEVICE inline double bbox_test(const obbox_t *const b,
|
||||
const double x[3])
|
||||
{
|
||||
const double bxyz = AABB_test(b, x);
|
||||
if (bxyz < 0)
|
||||
{
|
||||
return bxyz;
|
||||
}
|
||||
else
|
||||
{
|
||||
double dxyz[3];
|
||||
for (int d = 0; d < 3; ++d)
|
||||
{
|
||||
dxyz[d] = x[d]-b->c0[d];
|
||||
}
|
||||
double test = 1;
|
||||
for (int d = 0; d < 3; ++d)
|
||||
{
|
||||
double rst = 0;
|
||||
for (int e = 0; e < 3; ++e)
|
||||
{
|
||||
rst += b->A[d*3+e]*dxyz[e];
|
||||
}
|
||||
double brst = (rst+1)*(1-rst);
|
||||
test = test < 0 ? test : brst;
|
||||
}
|
||||
return test;
|
||||
}
|
||||
}
|
||||
|
||||
// Element index corresponding to hash mesh that the point is located in.
|
||||
static MFEM_HOST_DEVICE inline int hash_index(const findptsLocalHashData_t *p,
|
||||
const double x[3])
|
||||
{
|
||||
const int n = p->hash_n;
|
||||
int sum = 0;
|
||||
for (int d = 3-1; d >= 0; --d)
|
||||
{
|
||||
sum *= n;
|
||||
int i = (int)floor((x[d]-p->bnd[d].min)*p->fac[d]);
|
||||
sum += i < 0 ? 0 : (n-1 < i ? n-1 : i);
|
||||
}
|
||||
return sum;
|
||||
}
|
||||
using dbl_range_t = gslib::dbl_range_t;
|
||||
using obbox_t = gslib::obbox_t<DIM>;
|
||||
using findptsLocalHashData_t = gslib::findptsLocalHashData_t<DIM>;
|
||||
using gslib::bbox_test;
|
||||
using gslib::hash_index;
|
||||
using gslib::l2norm2;
|
||||
using gslib::lag_eval_first_der;
|
||||
using gslib::lag_eval_second_der;
|
||||
using gslib::lin_solve_sym_2;
|
||||
|
||||
// Solve Ax=y. A is row-major.
|
||||
static MFEM_HOST_DEVICE inline void lin_solve_3(double x[3], const double A[9],
|
||||
@@ -199,22 +84,6 @@ static MFEM_HOST_DEVICE inline void lin_solve_3(double x[3], const double A[9],
|
||||
x[2] = idet*(inv6*y[0]+inv7*y[1]+inv8*y[2]);
|
||||
}
|
||||
|
||||
// Solve Ax=y. A is a symmetric 2x2 matrix.
|
||||
static MFEM_HOST_DEVICE inline void lin_solve_sym_2(double x[2],
|
||||
const double A[3],
|
||||
const double y[2])
|
||||
{
|
||||
const double idet = 1 / (A[0]*A[2]-A[1]*A[1]);
|
||||
x[0] = idet*(A[2]*y[0]-A[1]*y[1]);
|
||||
x[1] = idet*(A[0]*y[1]-A[1]*y[0]);
|
||||
}
|
||||
|
||||
// L2 norm.
|
||||
static MFEM_HOST_DEVICE inline double l2norm2(const double x[3])
|
||||
{
|
||||
return x[0]*x[0]+x[1]*x[1]+x[2]*x[2];
|
||||
}
|
||||
|
||||
/* the bit structure of flags is CTTSSRR
|
||||
the C bit --- 1<<6 --- is set when the point is converged
|
||||
RR is 0 = 00b if r is unconstrained,
|
||||
@@ -459,7 +328,7 @@ static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsPt *res,
|
||||
const findptsPt *p,
|
||||
const double tol)
|
||||
{
|
||||
const double dist2 = l2norm2(resid);
|
||||
const double dist2 = l2norm2<3>(resid);
|
||||
const double decr = p->dist2-dist2;
|
||||
const double pred = p->dist2p;
|
||||
for (int d = 0; d < 3; ++d)
|
||||
@@ -1809,33 +1678,36 @@ void FindPointsGSLIB::FindPointsLocal3(const Vector &point_pos,
|
||||
{
|
||||
case 2:
|
||||
FindPointsLocal3DKernel<2>(npt, DEV.newt_tol, pp, point_pos_ordering,
|
||||
pgslm, NE_split_total, pwt, pbb, DEV.lh_nx, plhm,
|
||||
plhf, plho, pcode, pelem, pref, pdist, pgll1d,
|
||||
plc);
|
||||
pgslm, NE_split_total, pwt, pbb,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
break;
|
||||
case 3:
|
||||
FindPointsLocal3DKernel<3>(npt, DEV.newt_tol, pp, point_pos_ordering,
|
||||
pgslm, NE_split_total, pwt, pbb, DEV.lh_nx, plhm,
|
||||
plhf, plho, pcode, pelem, pref, pdist, pgll1d,
|
||||
plc);
|
||||
pgslm, NE_split_total, pwt, pbb,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
break;
|
||||
case 4:
|
||||
FindPointsLocal3DKernel<4>(npt, DEV.newt_tol, pp, point_pos_ordering,
|
||||
pgslm, NE_split_total, pwt, pbb, DEV.lh_nx, plhm,
|
||||
plhf, plho, pcode, pelem, pref, pdist, pgll1d,
|
||||
plc);
|
||||
pgslm, NE_split_total, pwt, pbb,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
break;
|
||||
case 5:
|
||||
FindPointsLocal3DKernel<5>(npt, DEV.newt_tol, pp, point_pos_ordering,
|
||||
pgslm, NE_split_total, pwt, pbb, DEV.lh_nx, plhm,
|
||||
plhf, plho, pcode, pelem, pref, pdist, pgll1d,
|
||||
plc);
|
||||
pgslm, NE_split_total, pwt, pbb,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
break;
|
||||
default:
|
||||
FindPointsLocal3DKernel(npt, DEV.newt_tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc,
|
||||
FindPointsLocal3DKernel(npt, DEV.newt_tol, pp,
|
||||
point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist, pgll1d, plc,
|
||||
DEV.dof1d);
|
||||
break;
|
||||
}
|
||||
}
|
||||
#undef pMax
|
||||
|
||||
+107
-176
@@ -11,6 +11,7 @@
|
||||
|
||||
#include "../gslib.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "gslib_kernel_helpers.hpp"
|
||||
|
||||
#ifdef MFEM_USE_GSLIB
|
||||
|
||||
@@ -52,113 +53,14 @@ struct findptsElementGPT_t
|
||||
double x[sDIM], jac[sDIM*rDIM], hes[sDIM*rDIM];
|
||||
};
|
||||
|
||||
struct dbl_range_t
|
||||
{
|
||||
double min, max;
|
||||
};
|
||||
|
||||
struct obbox_t
|
||||
{
|
||||
double c0[sDIM], A[sDIM*sDIM];
|
||||
dbl_range_t x[sDIM];
|
||||
};
|
||||
|
||||
struct findptsLocalHashData_t
|
||||
{
|
||||
int hash_n;
|
||||
dbl_range_t bnd[sDIM];
|
||||
double fac[sDIM];
|
||||
unsigned int *offset;
|
||||
};
|
||||
|
||||
static MFEM_HOST_DEVICE inline void lag_eval_second_der(double *p0, double x,
|
||||
int i, const double *z,
|
||||
const double *lCoeff,
|
||||
int pN)
|
||||
{
|
||||
double u0 = 1, u1 = 0, u2 = 0;
|
||||
for (int j = 0; j < pN; ++j)
|
||||
{
|
||||
if (i != j)
|
||||
{
|
||||
double d_j = 2 * (x-z[j]);
|
||||
u2 = d_j * u2 + u1;
|
||||
u1 = d_j * u1 + u0;
|
||||
u0 = d_j * u0;
|
||||
}
|
||||
}
|
||||
double *p1 = p0 + pN, *p2 = p0 + 2 * pN;
|
||||
p0[i] = lCoeff[i] * u0;
|
||||
p1[i] = 2.0 * lCoeff[i] * u1;
|
||||
p2[i] = 8.0 * lCoeff[i] * u2;
|
||||
}
|
||||
|
||||
/* positive when possibly inside */
|
||||
static MFEM_HOST_DEVICE inline double obbox_axis_test(const obbox_t *const b,
|
||||
const double x[sDIM])
|
||||
{
|
||||
double b_d;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
b_d = (x[d] - b->x[d].min) * (b->x[d].max - x[d]);
|
||||
if (b_d < 0) // if outside in any dimension
|
||||
{
|
||||
return b_d;
|
||||
}
|
||||
}
|
||||
return b_d; // only positive if inside
|
||||
}
|
||||
|
||||
/* positive when given point is possibly inside given obbox b */
|
||||
static MFEM_HOST_DEVICE inline double obbox_test(const obbox_t *const b,
|
||||
const double x[sDIM])
|
||||
{
|
||||
const double bxyz = obbox_axis_test(b,x);
|
||||
if (bxyz<0) // test if point is in AABB
|
||||
{
|
||||
return bxyz;
|
||||
}
|
||||
else // test OBB only if inside AABB
|
||||
{
|
||||
double dxyz[sDIM];
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
dxyz[d] = x[d] - b->c0[d];
|
||||
}
|
||||
double test = 1;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
double rst = 0;
|
||||
for (int e=0; e<sDIM; ++e)
|
||||
{
|
||||
rst += b->A[d*2 + e] * dxyz[e];
|
||||
}
|
||||
double brst = (rst+1)*(1-rst);
|
||||
test = test<0 ? test : brst;
|
||||
}
|
||||
return test;
|
||||
}
|
||||
}
|
||||
|
||||
/* Hash index in the hash table to the elements that possibly contain the point x */
|
||||
static MFEM_HOST_DEVICE inline int hash_index(const findptsLocalHashData_t *p,
|
||||
const double x[2])
|
||||
{
|
||||
const int n = p->hash_n;
|
||||
int sum = 0;
|
||||
for (int d=sDIM-1; d>=0; --d)
|
||||
{
|
||||
sum *= n;
|
||||
int i = (int)floor((x[d] - p->bnd[d].min) * p->fac[d]);
|
||||
sum += i<0 ? 0 : (n-1 < i ? n-1 : i);
|
||||
}
|
||||
return sum;
|
||||
}
|
||||
|
||||
static MFEM_HOST_DEVICE inline double l2norm2(const double x[2])
|
||||
{
|
||||
return x[0] * x[0] + x[1] * x[1];
|
||||
}
|
||||
using dbl_range_t = gslib::dbl_range_t;
|
||||
using obbox_t = gslib::obbox_t<sDIM>;
|
||||
using findptsLocalHashData_t = gslib::findptsLocalHashData_t<sDIM>;
|
||||
using gslib::AABB_test;
|
||||
using gslib::bbox_test;
|
||||
using gslib::hash_index;
|
||||
using gslib::l2norm2;
|
||||
using gslib::lag_eval_second_der;
|
||||
|
||||
/* the bit structure of flags is CRR
|
||||
the C bit --- 1<<2 --- is set when the point is converged
|
||||
@@ -187,29 +89,29 @@ static MFEM_HOST_DEVICE inline int point_index(const int x)
|
||||
/* check reduction in objective against prediction, and adjust
|
||||
trust region radius (p->tr) accordingly;
|
||||
may reject the prior step, returning 1; otherwise returns 0
|
||||
sets out->dist2, out->index, out->x, out->oldr in any event,
|
||||
leaving out->r, out->dr, out->flags to be set when returning 0 */
|
||||
static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *out,
|
||||
sets out_pt->dist2, out_pt->index, out_pt->x, out_pt->oldr in any event,
|
||||
leaving out_pt->r, out_pt->dr, out_pt->flags to be set when returning 0 */
|
||||
static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *out_pt,
|
||||
const double resid[2],
|
||||
const findptsElementPoint_t *p,
|
||||
const double tol)
|
||||
{
|
||||
const double dist2 = l2norm2(resid);
|
||||
const double dist2 = l2norm2<2>(resid);
|
||||
const double decr = p->dist2 - dist2;
|
||||
const double pred = p->dist2p;
|
||||
out->x[0] = p->x[0];
|
||||
out->x[1] = p->x[1];
|
||||
out->oldr = p->r;
|
||||
out->dist2 = dist2;
|
||||
out_pt->x[0] = p->x[0];
|
||||
out_pt->x[1] = p->x[1];
|
||||
out_pt->oldr = p->r;
|
||||
out_pt->dist2 = dist2;
|
||||
if (decr >= 0.01*pred)
|
||||
{
|
||||
if (decr >= 0.9*pred) // very good iteration
|
||||
{
|
||||
out->tr = p->tr*2;
|
||||
out_pt->tr = p->tr*2;
|
||||
}
|
||||
else // somewhat good iteration
|
||||
{
|
||||
out->tr = p->tr;
|
||||
out_pt->tr = p->tr;
|
||||
}
|
||||
return false;
|
||||
}
|
||||
@@ -220,21 +122,21 @@ static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *out,
|
||||
"very good iteration" --- this doubles the trust radius,
|
||||
which is why we divide by 4 below */
|
||||
double v0 = fabs(p->r - p->oldr);
|
||||
out->tr = v0/4.0;
|
||||
out->dist2 = p->dist2;
|
||||
out->r = p->oldr;
|
||||
out->flags = p->flags>>3;
|
||||
out->dist2p = -HUGE_VAL;
|
||||
out_pt->tr = v0/4.0;
|
||||
out_pt->dist2 = p->dist2;
|
||||
out_pt->r = p->oldr;
|
||||
out_pt->flags = p->flags>>3;
|
||||
out_pt->dist2p = -HUGE_VAL;
|
||||
if (pred < dist2*tol)
|
||||
{
|
||||
out->flags |= CONVERGED_FLAG;
|
||||
out_pt->flags |= CONVERGED_FLAG;
|
||||
}
|
||||
return true;
|
||||
}
|
||||
}
|
||||
|
||||
static MFEM_HOST_DEVICE inline void newton_edge( findptsElementPoint_t *const
|
||||
out,
|
||||
out_pt,
|
||||
const double jac[2],
|
||||
const double rhess,
|
||||
const double resid[2],
|
||||
@@ -304,9 +206,9 @@ newton_edge_fin:
|
||||
{
|
||||
new_flags |= CONVERGED_FLAG;
|
||||
}
|
||||
out->r = newr;
|
||||
out->dist2p = -v;
|
||||
out->flags = flags | new_flags | ((p->flags & FLAG_MASK)<<3);
|
||||
out_pt->r = newr;
|
||||
out_pt->dist2p = -v;
|
||||
out_pt->flags = flags | new_flags | ((p->flags & FLAG_MASK)<<3);
|
||||
}
|
||||
|
||||
static MFEM_HOST_DEVICE void seed_j( const double *elx[sDIM],
|
||||
@@ -332,26 +234,27 @@ static MFEM_HOST_DEVICE void seed_j( const double *elx[sDIM],
|
||||
}
|
||||
|
||||
template<int T_D1D = 0>
|
||||
static void FindPointsEdgeLocal2D_Kernel( const int npt,
|
||||
const double tol,
|
||||
const double dist2tol,
|
||||
const double *x,
|
||||
const int point_pos_ordering,
|
||||
const double *xElemCoord,
|
||||
const int nel,
|
||||
const double *wtend,
|
||||
const double *boxinfo,
|
||||
const int hash_n,
|
||||
const double *hashMin,
|
||||
const double *hashFac,
|
||||
unsigned int *hashOffset,
|
||||
unsigned int *const code_base,
|
||||
unsigned int *const el_base,
|
||||
double *const r_base,
|
||||
double *const dist2_base,
|
||||
const double *gll1D,
|
||||
const double *lagcoeff,
|
||||
const int pN = 0 )
|
||||
static void FindPointsEdgeLocal2DKernel( const int npt,
|
||||
const double tol,
|
||||
const double dist2tol,
|
||||
const double *x,
|
||||
const int point_pos_ordering,
|
||||
const double *xElemCoord,
|
||||
const int nel,
|
||||
const double *wtend,
|
||||
const double *boxinfo,
|
||||
const bool obb_check,
|
||||
const int hash_n,
|
||||
const double *hashMin,
|
||||
const double *hashFac,
|
||||
unsigned int *hashOffset,
|
||||
unsigned int *const code_base,
|
||||
unsigned int *const el_base,
|
||||
double *const r_base,
|
||||
double *const dist2_base,
|
||||
const double *gll1D,
|
||||
const double *lagcoeff,
|
||||
const int pN = 0 )
|
||||
{
|
||||
const int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
const int D1D = T_D1D ? T_D1D : pN;
|
||||
@@ -412,22 +315,34 @@ static void FindPointsEdgeLocal2D_Kernel( const int npt,
|
||||
{
|
||||
const unsigned int el = *elp;
|
||||
|
||||
const int n_box_ents = obb_check ? (3*sDIM + sDIM2) : (2*sDIM);
|
||||
bool pass_bb = true;
|
||||
obbox_t box;
|
||||
int n_box_ents = 3*sDIM + sDIM2;
|
||||
|
||||
for (int idx = 0; idx < sDIM; ++idx)
|
||||
if (obb_check)
|
||||
{
|
||||
box.c0[idx] = boxinfo[n_box_ents*el + idx];
|
||||
box.x[idx].min = boxinfo[n_box_ents*el + sDIM + idx];
|
||||
box.x[idx].max = boxinfo[n_box_ents*el + 2*sDIM + idx];
|
||||
for (int idx = 0; idx < sDIM; ++idx)
|
||||
{
|
||||
box.c0[idx] = boxinfo[n_box_ents*el + idx];
|
||||
box.x[idx].min = boxinfo[n_box_ents*el + sDIM + idx];
|
||||
box.x[idx].max = boxinfo[n_box_ents*el + 2*sDIM + idx];
|
||||
}
|
||||
for (int idx = 0; idx < sDIM2; ++idx)
|
||||
{
|
||||
box.A[idx] = boxinfo[n_box_ents*el + 3*sDIM + idx];
|
||||
}
|
||||
pass_bb = (bbox_test(&box, x_i) >= 0);
|
||||
}
|
||||
else
|
||||
{
|
||||
for (int d = 0; d < sDIM; ++d)
|
||||
{
|
||||
box.x[d].min = boxinfo[n_box_ents*el + d];
|
||||
box.x[d].max = boxinfo[n_box_ents*el + sDIM + d];
|
||||
}
|
||||
pass_bb = (AABB_test(&box, x_i) >= 0);
|
||||
}
|
||||
|
||||
for (int idx = 0; idx < sDIM2; ++idx)
|
||||
{
|
||||
box.A[idx] = boxinfo[n_box_ents*el + 3*sDIM + idx];
|
||||
}
|
||||
|
||||
if (obbox_test(&box,x_i)>=0)
|
||||
if (pass_bb)
|
||||
{
|
||||
//------------ findpts_local ------------------
|
||||
{
|
||||
@@ -516,11 +431,14 @@ static void FindPointsEdgeLocal2D_Kernel( const int npt,
|
||||
double *hess = jac + sDIM*rDIM;
|
||||
|
||||
findptsElementGEdge_t edge;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
edge.x[d] = constraint_workspace + d*D1D;
|
||||
}
|
||||
MFEM_FOREACH_THREAD(j,x,D1D)
|
||||
{
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
edge.x[d] = constraint_workspace + d*D1D;
|
||||
edge.x[d][j] = elx[d][j];
|
||||
}
|
||||
}
|
||||
@@ -681,28 +599,41 @@ void FindPointsGSLIB::FindPointsEdgeLocal2( const Vector &point_pos,
|
||||
auto pgll1d = DEV.gll1d.ReadWrite(use_dev);
|
||||
auto plc = DEV.lagcoeff.Read(use_dev);
|
||||
double dist2tol = DEV.surf_dist_tol;
|
||||
const bool obb_chk = obb_check;
|
||||
switch (DEV.dof1d)
|
||||
{
|
||||
case 2:
|
||||
return FindPointsEdgeLocal2D_Kernel<2>(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
FindPointsEdgeLocal2DKernel<2>(npt, DEV.newt_tol, dist2tol,
|
||||
pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
case 3:
|
||||
return FindPointsEdgeLocal2D_Kernel<3>(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
FindPointsEdgeLocal2DKernel<3>(npt, DEV.newt_tol, dist2tol,
|
||||
pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
case 4:
|
||||
return FindPointsEdgeLocal2D_Kernel<4>(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
FindPointsEdgeLocal2DKernel<4>(npt, DEV.newt_tol, dist2tol,
|
||||
pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
default:
|
||||
return FindPointsEdgeLocal2D_Kernel(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc, DEV.dof1d);
|
||||
FindPointsEdgeLocal2DKernel(npt, DEV.newt_tol, dist2tol, pp,
|
||||
point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc, DEV.dof1d);
|
||||
break;
|
||||
}
|
||||
}
|
||||
#undef sDIM
|
||||
|
||||
+109
-181
@@ -11,6 +11,7 @@
|
||||
|
||||
#include "../gslib.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "gslib_kernel_helpers.hpp"
|
||||
|
||||
#ifdef MFEM_USE_GSLIB
|
||||
|
||||
@@ -54,117 +55,14 @@ struct findptsElementGPT_t
|
||||
double x[sDIM], jac[sDIM], hes[sDIM*(1+1)];
|
||||
};
|
||||
|
||||
struct dbl_range_t
|
||||
{
|
||||
double min, max;
|
||||
};
|
||||
|
||||
struct obbox_t
|
||||
{
|
||||
double c0[sDIM], A[sDIM*sDIM];
|
||||
dbl_range_t x[sDIM];
|
||||
};
|
||||
|
||||
struct findptsLocalHashData_t
|
||||
{
|
||||
int hash_n;
|
||||
dbl_range_t bnd[sDIM];
|
||||
double fac[sDIM];
|
||||
unsigned int *offset;
|
||||
};
|
||||
|
||||
static MFEM_HOST_DEVICE inline void lag_eval_second_der(double *p0, double x,
|
||||
int i, const double *z,
|
||||
const double *lCoeff,
|
||||
int pN)
|
||||
{
|
||||
double u0 = 1, u1 = 0, u2 = 0;
|
||||
for (int j=0; j<pN; ++j)
|
||||
{
|
||||
if (i!=j)
|
||||
{
|
||||
double d_j = 2 * (x-z[j]);
|
||||
u2 = d_j * u2 + u1;
|
||||
u1 = d_j * u1 + u0;
|
||||
u0 = d_j * u0;
|
||||
}
|
||||
}
|
||||
double *p1 = p0 + pN, *p2 = p0 + 2 * pN;
|
||||
p0[i] = lCoeff[i] * u0;
|
||||
p1[i] = 2.0 * lCoeff[i] * u1;
|
||||
p2[i] = 8.0 * lCoeff[i] * u2;
|
||||
}
|
||||
|
||||
/* positive when possibly inside */
|
||||
static MFEM_HOST_DEVICE inline double obbox_axis_test(const obbox_t *const b,
|
||||
const double x[sDIM])
|
||||
{
|
||||
double b_d;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
b_d = (x[d] - b->x[d].min) * (b->x[d].max - x[d]);
|
||||
if (b_d < 0) // if outside in any dimension
|
||||
{
|
||||
return b_d;
|
||||
}
|
||||
}
|
||||
return b_d; // only positive if inside in all dimensions
|
||||
}
|
||||
|
||||
/* positive when possibly inside */
|
||||
static MFEM_HOST_DEVICE inline double obbox_test(const obbox_t *const b,
|
||||
const double x[sDIM])
|
||||
{
|
||||
const double bxyz = obbox_axis_test(b, x);
|
||||
if (bxyz<0)
|
||||
{
|
||||
return bxyz;
|
||||
}
|
||||
else
|
||||
{
|
||||
double dxyz[3];
|
||||
// dxyz: distance of the point from the center of the OBB
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
dxyz[d] = x[d] - b->c0[d];
|
||||
}
|
||||
// transform dxyz to the local coordinate system of the OBB,
|
||||
// and check if the point is inside the OBB [-1,1]^sDIM
|
||||
double test = 1;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
double rst = 0;
|
||||
for (int e=0; e<sDIM; ++e)
|
||||
{
|
||||
rst += b->A[d*sDIM + e] * dxyz[e];
|
||||
}
|
||||
double brst = (rst+1)*(1-rst);
|
||||
test = test<0 ? test : brst;
|
||||
}
|
||||
return test;
|
||||
}
|
||||
}
|
||||
|
||||
/* Hash index in the hash table to the elements that possibly contain the point x */
|
||||
static MFEM_HOST_DEVICE inline int hash_index(const findptsLocalHashData_t *p,
|
||||
const double x[sDIM])
|
||||
{
|
||||
const int n = p->hash_n;
|
||||
int sum = 0;
|
||||
for (int d=sDIM-1; d>=0; --d)
|
||||
{
|
||||
sum *= n;
|
||||
int i = (int)floor((x[d] - p->bnd[d].min) * p->fac[d]);
|
||||
sum += i<0 ? 0 : (n-1 < i ? n-1 : i);
|
||||
}
|
||||
return sum;
|
||||
}
|
||||
|
||||
|
||||
static MFEM_HOST_DEVICE inline double norm2(const double x[sDIM])
|
||||
{
|
||||
return ( x[0]*x[0] + x[1]*x[1] + x[2]*x[2] );
|
||||
}
|
||||
using dbl_range_t = gslib::dbl_range_t;
|
||||
using obbox_t = gslib::obbox_t<sDIM>;
|
||||
using findptsLocalHashData_t = gslib::findptsLocalHashData_t<sDIM>;
|
||||
using gslib::AABB_test;
|
||||
using gslib::bbox_test;
|
||||
using gslib::hash_index;
|
||||
using gslib::l2norm2;
|
||||
using gslib::lag_eval_second_der;
|
||||
|
||||
/* the bit structure of flags is CRR
|
||||
the C bit --- 1<<2 --- is set when the point is converged
|
||||
@@ -175,47 +73,46 @@ static MFEM_HOST_DEVICE inline double norm2(const double x[sDIM])
|
||||
#define CONVERGED_FLAG (1u<<2)
|
||||
#define FLAG_MASK 0x07u
|
||||
|
||||
/* returns the number of constrained reference coordinates, max 2
|
||||
/* returns the number of constrained reference coordinates, max 1
|
||||
*/
|
||||
static MFEM_HOST_DEVICE inline int num_constrained(const int flags)
|
||||
{
|
||||
const int y = (flags | flags>>1);
|
||||
return (y & 1u) + (y>>2 & 1u);
|
||||
return ((flags | flags>>1) & 1u);
|
||||
}
|
||||
|
||||
static MFEM_HOST_DEVICE inline int point_index(const int x)
|
||||
{
|
||||
return ((x>>1)&1u) | ((x>>2)&2u);
|
||||
return ((x>>1)&1u);
|
||||
}
|
||||
|
||||
/* check reduction in objective against prediction, and adjust
|
||||
trust region radius (p->tr) accordingly;
|
||||
may reject the prior step, returning 1; otherwise returns 0
|
||||
sets out->dist2, out->index, out->x, out->oldr in any event,
|
||||
leaving out->r, out->dr, out->flags to be set when returning 0 */
|
||||
static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *out,
|
||||
sets out_pt->dist2, out_pt->index, out_pt->x, out_pt->oldr in any event,
|
||||
leaving out_pt->r, out_pt->dr, out_pt->flags to be set when returning 0 */
|
||||
static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *out_pt,
|
||||
const double resid[3],
|
||||
const findptsElementPoint_t *p,
|
||||
const double tol)
|
||||
{
|
||||
const double dist2 = norm2(resid);
|
||||
const double dist2 = l2norm2<sDIM>(resid);
|
||||
const double decr = p->dist2 - dist2;
|
||||
const double pred = p->dist2p;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
out->x[d] = p->x[d];
|
||||
out_pt->x[d] = p->x[d];
|
||||
}
|
||||
out->oldr = p->r;
|
||||
out->dist2 = dist2;
|
||||
out_pt->oldr = p->r;
|
||||
out_pt->dist2 = dist2;
|
||||
if (decr>=0.01*pred)
|
||||
{
|
||||
if (decr>=0.9*pred) // very good iteration
|
||||
{
|
||||
out->tr = 2*p->tr;
|
||||
out_pt->tr = 2*p->tr;
|
||||
}
|
||||
else // good iteration
|
||||
{
|
||||
out->tr = p->tr;
|
||||
out_pt->tr = p->tr;
|
||||
}
|
||||
return false;
|
||||
}
|
||||
@@ -226,21 +123,21 @@ static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *out,
|
||||
"very good iteration" --- this doubles the trust radius,
|
||||
which is why we divide by 4 below */
|
||||
double v0 = fabs(p->r - p->oldr);
|
||||
out->tr = v0/4.0;
|
||||
out->dist2 = p->dist2;
|
||||
out->r = p->oldr;
|
||||
out->flags = p->flags>>3;
|
||||
out->dist2p = -HUGE_VAL;
|
||||
out_pt->tr = v0/4.0;
|
||||
out_pt->dist2 = p->dist2;
|
||||
out_pt->r = p->oldr;
|
||||
out_pt->flags = p->flags>>3;
|
||||
out_pt->dist2p = -HUGE_VAL;
|
||||
if (pred<dist2*tol)
|
||||
{
|
||||
out->flags |= CONVERGED_FLAG;
|
||||
out_pt->flags |= CONVERGED_FLAG;
|
||||
}
|
||||
return true;
|
||||
}
|
||||
}
|
||||
|
||||
static MFEM_HOST_DEVICE inline void newton_edge(findptsElementPoint_t *const
|
||||
out,
|
||||
out_pt,
|
||||
const double jac[sDIM*rDIM],
|
||||
const double rhes,
|
||||
const double resid[sDIM],
|
||||
@@ -314,9 +211,9 @@ newton_edge_fin:
|
||||
{
|
||||
new_flags |= CONVERGED_FLAG;
|
||||
}
|
||||
out->r = nr;
|
||||
out->dist2p = -v;
|
||||
out->flags = flags | new_flags | ((p->flags & FLAG_MASK)<<3);
|
||||
out_pt->r = nr;
|
||||
out_pt->dist2p = -v;
|
||||
out_pt->flags = flags | new_flags | ((p->flags & FLAG_MASK)<<3);
|
||||
#undef EVAL
|
||||
}
|
||||
|
||||
@@ -338,31 +235,32 @@ static MFEM_HOST_DEVICE void seed_j(const double *elx[sDIM],
|
||||
{
|
||||
dx[d] = x[d] - elx[d][ir];
|
||||
}
|
||||
dist2[ir] = norm2(dx);;
|
||||
dist2[ir] = l2norm2(dx);
|
||||
r[ir] = z[ir];
|
||||
}
|
||||
|
||||
template<int T_D1D = 0>
|
||||
static void FindPointsEdgeLocal3D_Kernel(const int npt,
|
||||
const double tol,
|
||||
const double dist2tol,
|
||||
const double *x,
|
||||
const int point_pos_ordering,
|
||||
const double *xElemCoord,
|
||||
const int nel,
|
||||
const double *wtend,
|
||||
const double *boxinfo,
|
||||
const int hash_n,
|
||||
const double *hashMin,
|
||||
const double *hashFac,
|
||||
unsigned int *hashOffset,
|
||||
unsigned int *const code_base,
|
||||
unsigned int *const el_base,
|
||||
double *const r_base,
|
||||
double *const dist2_base,
|
||||
const double *gll1D,
|
||||
const double *lagcoeff,
|
||||
const int pN = 0)
|
||||
static void FindPointsEdgeLocal3DKernel(const int npt,
|
||||
const double tol,
|
||||
const double dist2tol,
|
||||
const double *x,
|
||||
const int point_pos_ordering,
|
||||
const double *xElemCoord,
|
||||
const int nel,
|
||||
const double *wtend,
|
||||
const double *boxinfo,
|
||||
const bool obb_check,
|
||||
const int hash_n,
|
||||
const double *hashMin,
|
||||
const double *hashFac,
|
||||
unsigned int *hashOffset,
|
||||
unsigned int *const code_base,
|
||||
unsigned int *const el_base,
|
||||
double *const r_base,
|
||||
double *const dist2_base,
|
||||
const double *gll1D,
|
||||
const double *lagcoeff,
|
||||
const int pN = 0)
|
||||
{
|
||||
const int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
const int D1D = T_D1D ? T_D1D : pN;
|
||||
@@ -419,21 +317,35 @@ static void FindPointsEdgeLocal3D_Kernel(const int npt,
|
||||
for (; elp!=ele; ++elp)
|
||||
{
|
||||
const unsigned int el = *elp;
|
||||
|
||||
const int n_box_ents = obb_check ? (3*sDIM + sDIM2) : (2*sDIM);
|
||||
bool pass_bb = true;
|
||||
obbox_t box;
|
||||
int n_box_ents = 3*sDIM + sDIM2;
|
||||
|
||||
for (int idx = 0; idx < sDIM; ++idx)
|
||||
if (obb_check)
|
||||
{
|
||||
box.c0[idx] = boxinfo[n_box_ents*el + idx];
|
||||
box.x[idx].min = boxinfo[n_box_ents*el + sDIM + idx];
|
||||
box.x[idx].max = boxinfo[n_box_ents*el + 2*sDIM + idx];
|
||||
for (int idx = 0; idx < sDIM; ++idx)
|
||||
{
|
||||
box.c0[idx] = boxinfo[n_box_ents*el + idx];
|
||||
box.x[idx].min = boxinfo[n_box_ents*el + sDIM + idx];
|
||||
box.x[idx].max = boxinfo[n_box_ents*el + 2*sDIM + idx];
|
||||
}
|
||||
for (int idx = 0; idx < sDIM2; ++idx)
|
||||
{
|
||||
box.A[idx] = boxinfo[n_box_ents*el + 3*sDIM + idx];
|
||||
}
|
||||
pass_bb = (bbox_test(&box, x_i) >= 0);
|
||||
}
|
||||
for (int idx = 0; idx < sDIM2; ++idx)
|
||||
else
|
||||
{
|
||||
box.A[idx] = boxinfo[n_box_ents*el + 3*sDIM + idx];
|
||||
for (int d = 0; d < sDIM; ++d)
|
||||
{
|
||||
box.x[d].min = boxinfo[n_box_ents*el + d];
|
||||
box.x[d].max = boxinfo[n_box_ents*el + sDIM + d];
|
||||
}
|
||||
pass_bb = (AABB_test(&box, x_i) >= 0);
|
||||
}
|
||||
|
||||
if (obbox_test(&box, x_i)>=0)
|
||||
if (pass_bb)
|
||||
{
|
||||
//// findpts_local ////
|
||||
{
|
||||
@@ -521,11 +433,14 @@ static void FindPointsEdgeLocal3D_Kernel(const int npt,
|
||||
double *hess = jac + sDIM*rDIM;
|
||||
|
||||
findptsElementGEdge_t edge;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
edge.x[d] = constraint_workspace + d*D1D;
|
||||
}
|
||||
MFEM_FOREACH_THREAD(j,x,D1D)
|
||||
{
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
edge.x[d] = constraint_workspace + d*D1D;
|
||||
edge.x[d][j] = elx[d][j];
|
||||
}
|
||||
}
|
||||
@@ -688,28 +603,41 @@ void FindPointsGSLIB::FindPointsEdgeLocal3(const Vector &point_pos,
|
||||
auto pgll1d = DEV.gll1d.ReadWrite(use_dev);
|
||||
auto plc = DEV.lagcoeff.Read(use_dev);
|
||||
double dist2tol = DEV.surf_dist_tol;
|
||||
const bool obb_chk = obb_check;
|
||||
switch (DEV.dof1d)
|
||||
{
|
||||
case 2:
|
||||
return FindPointsEdgeLocal3D_Kernel<2>(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
FindPointsEdgeLocal3DKernel<2>(npt, DEV.newt_tol, dist2tol,
|
||||
pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
case 3:
|
||||
return FindPointsEdgeLocal3D_Kernel<3>(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
FindPointsEdgeLocal3DKernel<3>(npt, DEV.newt_tol, dist2tol,
|
||||
pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
case 4:
|
||||
return FindPointsEdgeLocal3D_Kernel<4>(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
FindPointsEdgeLocal3DKernel<4>(npt, DEV.newt_tol, dist2tol,
|
||||
pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
default:
|
||||
return FindPointsEdgeLocal3D_Kernel(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc, DEV.dof1d);
|
||||
FindPointsEdgeLocal3DKernel(npt, DEV.newt_tol, dist2tol, pp,
|
||||
point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc, DEV.dof1d);
|
||||
break;
|
||||
}
|
||||
}
|
||||
#undef rDIM2
|
||||
|
||||
+131
-206
@@ -11,6 +11,7 @@
|
||||
|
||||
#include "../gslib.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "gslib_kernel_helpers.hpp"
|
||||
#ifdef MFEM_USE_GSLIB
|
||||
|
||||
#ifdef MFEM_HAVE_GCC_PRAGMA_DIAGNOSTIC
|
||||
@@ -51,124 +52,15 @@ struct findptsElementGPT_t
|
||||
double x[sDIM], jac[sDIM*rDIM], hes[sDIM*(rDIM+1)];
|
||||
};
|
||||
|
||||
struct dbl_range_t
|
||||
{
|
||||
double min, max;
|
||||
};
|
||||
|
||||
struct obbox_t
|
||||
{
|
||||
double c0[sDIM], A[sDIM*sDIM];
|
||||
dbl_range_t x[sDIM];
|
||||
};
|
||||
|
||||
struct findptsLocalHashData_t
|
||||
{
|
||||
int hash_n;
|
||||
dbl_range_t bnd[sDIM];
|
||||
double fac[sDIM];
|
||||
unsigned int *offset;
|
||||
};
|
||||
|
||||
static MFEM_HOST_DEVICE inline void lag_eval_second_der(double *p0, double x,
|
||||
int i, const double *z,
|
||||
const double *lCoeff,
|
||||
int pN)
|
||||
{
|
||||
double u0 = 1, u1 = 0, u2 = 0;
|
||||
for (int j = 0; j < pN; ++j)
|
||||
{
|
||||
if (i != j)
|
||||
{
|
||||
double d_j = 2 * (x - z[j]);
|
||||
u2 = d_j * u2 + u1;
|
||||
u1 = d_j * u1 + u0;
|
||||
u0 = d_j * u0;
|
||||
}
|
||||
}
|
||||
p0[i] = lCoeff[i] * u0;
|
||||
p0[pN+i] = 2.0 * lCoeff[i] * u1;
|
||||
p0[2*pN+i] = 8.0 * lCoeff[i] * u2;
|
||||
}
|
||||
|
||||
/* positive when possibly inside */
|
||||
static MFEM_HOST_DEVICE inline double AABB_test(const obbox_t *const b,
|
||||
const double x[sDIM])
|
||||
{
|
||||
double b_d;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
b_d = (x[d] - b->x[d].min) * (b->x[d].max - x[d]);
|
||||
if (b_d < 0) // if outside in any dimension
|
||||
{
|
||||
return b_d;
|
||||
}
|
||||
}
|
||||
return b_d; // only positive if inside in all dimensions
|
||||
}
|
||||
|
||||
/* positive when possibly inside */
|
||||
static MFEM_HOST_DEVICE inline double bbox_test(const obbox_t *const b,
|
||||
const double x[sDIM])
|
||||
{
|
||||
const double bxyz = AABB_test(b, x);
|
||||
if (bxyz<0)
|
||||
{
|
||||
return bxyz;
|
||||
}
|
||||
else
|
||||
{
|
||||
double dxyz[3];
|
||||
// dxyz: distance of the point from the center of the OBB
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
dxyz[d] = x[d] - b->c0[d];
|
||||
}
|
||||
// tranform dxyz to the local coordinate system of the OBB,
|
||||
// and check if the point is inside the OBB [-1,1]^sDIM
|
||||
double test = 1;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
double rst = 0;
|
||||
for (int e=0; e<sDIM; ++e)
|
||||
{
|
||||
rst += b->A[d*sDIM + e] * dxyz[e];
|
||||
}
|
||||
double brst = (rst+1)*(1-rst);
|
||||
test = test<0 ? test : brst;
|
||||
}
|
||||
return test;
|
||||
}
|
||||
}
|
||||
|
||||
/* Hash index in the hash table to the elements that possibly contain the point x */
|
||||
static MFEM_HOST_DEVICE inline int hash_index(const findptsLocalHashData_t *p,
|
||||
const double x[sDIM])
|
||||
{
|
||||
const int n = p->hash_n;
|
||||
int sum = 0;
|
||||
for (int d=sDIM-1; d>=0; --d)
|
||||
{
|
||||
sum *= n;
|
||||
int i = (int)floor((x[d] - p->bnd[d].min) * p->fac[d]);
|
||||
sum += i<0 ? 0 : (n-1 < i ? n-1 : i);
|
||||
}
|
||||
return sum;
|
||||
}
|
||||
|
||||
static MFEM_HOST_DEVICE inline void lin_solve_sym_2(double x[2],
|
||||
const double A[3],
|
||||
const double y[2])
|
||||
{
|
||||
const double idet = 1 / (A[0] * A[2] - A[1] * A[1]);
|
||||
x[0] = idet * (A[2] * y[0] - A[1] * y[1]);
|
||||
x[1] = idet * (A[0] * y[1] - A[1] * y[0]);
|
||||
}
|
||||
|
||||
static MFEM_HOST_DEVICE inline double l2norm2(const double x[sDIM])
|
||||
{
|
||||
return ( x[0]*x[0] + x[1]*x[1] + x[2]*x[2]);
|
||||
}
|
||||
using dbl_range_t = gslib::dbl_range_t;
|
||||
using obbox_t = gslib::obbox_t<sDIM>;
|
||||
using findptsLocalHashData_t = gslib::findptsLocalHashData_t<sDIM>;
|
||||
using gslib::AABB_test;
|
||||
using gslib::bbox_test;
|
||||
using gslib::hash_index;
|
||||
using gslib::l2norm2;
|
||||
using gslib::lag_eval_second_der;
|
||||
using gslib::lin_solve_sym_2;
|
||||
|
||||
/* the bit structure of flags is CSSRR
|
||||
the C bit --- 1<<4 --- is set when the point is converged
|
||||
@@ -219,18 +111,10 @@ static MFEM_HOST_DEVICE inline int point_index(const int x)
|
||||
return ((x>>1)&1u) | ((x>>2)&2u);
|
||||
}
|
||||
|
||||
static MFEM_HOST_DEVICE inline findptsElementGEdge_t
|
||||
static MFEM_HOST_DEVICE inline void
|
||||
get_edge(const double *elx[3], const double *wtend, int ei,
|
||||
double *workspace, int &side_init, int jidx, int pN)
|
||||
int &side_init, int jidx, int pN, findptsElementGEdge_t &edge)
|
||||
{
|
||||
findptsElementGEdge_t edge;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
edge.x[d] = workspace + d*pN;
|
||||
edge.dxdn[d] = workspace + sDIM*pN + d*pN;
|
||||
edge.d2xdn[d] = workspace + 2*sDIM*pN + d*pN;
|
||||
}
|
||||
|
||||
// given edge index, compute normal and tangential directions
|
||||
const int dn = ei>>1, //0 for rmin/rmax, 1 for smin/smax
|
||||
de = plus_1_mod_2(dn); // 1 for rmin/rmax, 0 for smin/smax
|
||||
@@ -256,7 +140,6 @@ get_edge(const double *elx[3], const double *wtend, int ei,
|
||||
edge.d2xdn[dd][jj] = sums_k[1];
|
||||
#undef ELX
|
||||
}
|
||||
return edge;
|
||||
}
|
||||
|
||||
static MFEM_HOST_DEVICE inline findptsElementGPT_t get_pt(const double *elx[3],
|
||||
@@ -312,34 +195,34 @@ static MFEM_HOST_DEVICE inline findptsElementGPT_t get_pt(const double *elx[3],
|
||||
/* check reduction in objective against prediction, and adjust
|
||||
trust region radius (p->tr) accordingly;
|
||||
may reject the prior step, returning 1; otherwise returns 0
|
||||
sets out->dist2, out->index, out->x, out->oldr in any event,
|
||||
leaving out->r, out->dr, out->flags to be set when returning 0 */
|
||||
static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *out,
|
||||
sets out_pt->dist2, out_pt->index, out_pt->x, out_pt->oldr in any event,
|
||||
leaving out_pt->r, out_pt->dr, out_pt->flags to be set when returning 0 */
|
||||
static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *out_pt,
|
||||
const double resid[3],
|
||||
const findptsElementPoint_t *p,
|
||||
const double tol)
|
||||
{
|
||||
const double dist2 = l2norm2(resid);
|
||||
const double dist2 = l2norm2<sDIM>(resid);
|
||||
const double decr = p->dist2 - dist2;
|
||||
const double pred = p->dist2p;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
out->x[d] = p->x[d];
|
||||
out_pt->x[d] = p->x[d];
|
||||
}
|
||||
for (int d=0; d<rDIM; ++d)
|
||||
{
|
||||
out->oldr[d] = p->r[d];
|
||||
out_pt->oldr[d] = p->r[d];
|
||||
}
|
||||
out->dist2 = dist2;
|
||||
out_pt->dist2 = dist2;
|
||||
if (decr>=0.01*pred)
|
||||
{
|
||||
if (decr>=0.9*pred) // very good iteration
|
||||
{
|
||||
out->tr = 2*p->tr;
|
||||
out_pt->tr = 2*p->tr;
|
||||
}
|
||||
else // good iteration
|
||||
{
|
||||
out->tr = p->tr;
|
||||
out_pt->tr = p->tr;
|
||||
}
|
||||
return false;
|
||||
}
|
||||
@@ -351,17 +234,17 @@ static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *out,
|
||||
which is why we divide by 4 below */
|
||||
double v0 = fabs(p->r[0] - p->oldr[0]),
|
||||
v1 = fabs(p->r[1] - p->oldr[1]);
|
||||
out->tr = ( v0>v1 ? v0 : v1 )/4;
|
||||
out->dist2 = p->dist2;
|
||||
out->flags = p->flags >> 5;
|
||||
out->dist2p = -HUGE_VAL;
|
||||
out_pt->tr = ( v0>v1 ? v0 : v1 )/4;
|
||||
out_pt->dist2 = p->dist2;
|
||||
out_pt->flags = p->flags >> 5;
|
||||
out_pt->dist2p = -HUGE_VAL;
|
||||
for (int d=0; d<rDIM; ++d)
|
||||
{
|
||||
out->r[d] = p->oldr[d];
|
||||
out_pt->r[d] = p->oldr[d];
|
||||
}
|
||||
if (pred<dist2*tol)
|
||||
{
|
||||
out->flags |= CONVERGED_FLAG;
|
||||
out_pt->flags |= CONVERGED_FLAG;
|
||||
}
|
||||
return true;
|
||||
}
|
||||
@@ -369,7 +252,7 @@ static MFEM_HOST_DEVICE bool reject_prior_step_q(findptsElementPoint_t *out,
|
||||
|
||||
/* minimize ||resid - jac * dr||_2, with |dr| <= tr, |r0+dr|<=1
|
||||
(exact solution of trust region problem) */
|
||||
static MFEM_HOST_DEVICE void newton_face( findptsElementPoint_t *const out,
|
||||
static MFEM_HOST_DEVICE void newton_face( findptsElementPoint_t *const out_pt,
|
||||
const double jac[sDIM*rDIM],
|
||||
const double rhes[3],
|
||||
const double resid[sDIM],
|
||||
@@ -540,19 +423,19 @@ newton_face_constrained:
|
||||
}
|
||||
|
||||
newton_face_fin:
|
||||
out->dist2p = -2*v;
|
||||
out_pt->dist2p = -2*v;
|
||||
dr[0] = r[0] - p->r[0];
|
||||
dr[1] = r[1] - p->r[1];
|
||||
if ( fabs(dr[0])+fabs(dr[1]) < tol)
|
||||
{
|
||||
new_flags |= CONVERGED_FLAG;
|
||||
}
|
||||
out->r[0] = r[0], out->r[1] = r[1];
|
||||
out->flags = new_flags | ((p->flags & FLAG_MASK)<<5);
|
||||
out_pt->r[0] = r[0], out_pt->r[1] = r[1];
|
||||
out_pt->flags = new_flags | ((p->flags & FLAG_MASK)<<5);
|
||||
}
|
||||
|
||||
static MFEM_HOST_DEVICE inline void newton_edge(findptsElementPoint_t *const
|
||||
out,
|
||||
out_pt,
|
||||
const double jac[sDIM*rDIM],
|
||||
const double rhes,
|
||||
const double resid[sDIM],
|
||||
@@ -637,10 +520,10 @@ newton_edge_fin:
|
||||
{
|
||||
new_flags |= CONVERGED_FLAG;
|
||||
}
|
||||
out->r[de] = nr;
|
||||
out->r[dn] = p->r[dn];
|
||||
out->dist2p = -v;
|
||||
out->flags = flags | new_flags | ((p->flags & FLAG_MASK)<<5);
|
||||
out_pt->r[de] = nr;
|
||||
out_pt->r[dn] = p->r[dn];
|
||||
out_pt->dist2p = -v;
|
||||
out_pt->flags = flags | new_flags | ((p->flags & FLAG_MASK)<<5);
|
||||
#undef EVAL
|
||||
}
|
||||
|
||||
@@ -676,26 +559,27 @@ static MFEM_HOST_DEVICE void seed_j(const double *elx[sDIM],
|
||||
// global memory access of element coordinates.
|
||||
// Are the structs being stored in "local memory" or registers?
|
||||
template<int T_D1D = 0>
|
||||
static void FindPointsSurfLocal3D_Kernel(const int npt,
|
||||
const double tol,
|
||||
const double dist2tol,
|
||||
const double *x,
|
||||
const int point_pos_ordering,
|
||||
const double *xElemCoord,
|
||||
const int nel,
|
||||
const double *wtend,
|
||||
const double *boxinfo,
|
||||
const int hash_n,
|
||||
const double *hashMin,
|
||||
const double *hashFac,
|
||||
unsigned int *hashOffset,
|
||||
unsigned int *const code_base,
|
||||
unsigned int *const el_base,
|
||||
double *const r_base,
|
||||
double *const dist2_base,
|
||||
const double *gll1D,
|
||||
const double *lagcoeff,
|
||||
const int pN = 0)
|
||||
static void FindPointsSurfLocal3DKernel(const int npt,
|
||||
const double tol,
|
||||
const double dist2tol,
|
||||
const double *x,
|
||||
const int point_pos_ordering,
|
||||
const double *xElemCoord,
|
||||
const int nel,
|
||||
const double *wtend,
|
||||
const double *boxinfo,
|
||||
const bool obb_check,
|
||||
const int hash_n,
|
||||
const double *hashMin,
|
||||
const double *hashFac,
|
||||
unsigned int *hashOffset,
|
||||
unsigned int *const code_base,
|
||||
unsigned int *const el_base,
|
||||
double *const r_base,
|
||||
double *const dist2_base,
|
||||
const double *gll1D,
|
||||
const double *lagcoeff,
|
||||
const int pN = 0)
|
||||
{
|
||||
const int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
const int D1D = T_D1D ? T_D1D : pN;
|
||||
@@ -753,22 +637,36 @@ static void FindPointsSurfLocal3D_Kernel(const int npt,
|
||||
{
|
||||
const unsigned int el = *elp;
|
||||
|
||||
// construct obbox on the fly
|
||||
const int n_box_ents = obb_check ? (3*sDIM + sDIM2) : (2*sDIM);
|
||||
bool pass_bb = true;
|
||||
obbox_t box;
|
||||
int n_box_ents = 3*sDIM + sDIM2;
|
||||
for (int idx = 0; idx < sDIM; ++idx)
|
||||
if (obb_check)
|
||||
{
|
||||
box.c0[idx] = boxinfo[n_box_ents*el + idx];
|
||||
box.x[idx].min = boxinfo[n_box_ents*el + sDIM + idx];
|
||||
box.x[idx].max = boxinfo[n_box_ents*el + 2*sDIM + idx];
|
||||
// construct obbox on the fly
|
||||
for (int idx = 0; idx < sDIM; ++idx)
|
||||
{
|
||||
box.c0[idx] = boxinfo[n_box_ents*el + idx];
|
||||
box.x[idx].min = boxinfo[n_box_ents*el + sDIM + idx];
|
||||
box.x[idx].max = boxinfo[n_box_ents*el + 2*sDIM + idx];
|
||||
}
|
||||
|
||||
for (int idx = 0; idx < sDIM2; ++idx)
|
||||
{
|
||||
box.A[idx] = boxinfo[n_box_ents*el + 3*sDIM + idx];
|
||||
}
|
||||
pass_bb = (bbox_test(&box, x_i) >= 0);
|
||||
}
|
||||
else
|
||||
{
|
||||
for (int d = 0; d < sDIM; ++d)
|
||||
{
|
||||
box.x[d].min = boxinfo[n_box_ents*el + d];
|
||||
box.x[d].max = boxinfo[n_box_ents*el + sDIM + d];
|
||||
}
|
||||
pass_bb = (AABB_test(&box, x_i) >= 0);
|
||||
}
|
||||
|
||||
for (int idx = 0; idx < sDIM2; ++idx)
|
||||
{
|
||||
box.A[idx] = boxinfo[n_box_ents*el + 3*sDIM + idx];
|
||||
}
|
||||
|
||||
if (bbox_test(&box, x_i) < 0) { continue; }
|
||||
if (!pass_bb) { continue; }
|
||||
|
||||
//// findpts_local ////
|
||||
{
|
||||
@@ -968,13 +866,19 @@ static void FindPointsSurfLocal3D_Kernel(const int npt,
|
||||
double *hes_T = jac + sDIM*rDIM;
|
||||
double *hes = hes_T + hes_count*sDIM;
|
||||
findptsElementGEdge_t edge;
|
||||
for (int d=0; d<sDIM; ++d)
|
||||
{
|
||||
edge.x[d] = constraint_workspace + d*D1D;
|
||||
edge.dxdn[d] = constraint_workspace + d*D1D
|
||||
+ sDIM*D1D;
|
||||
edge.d2xdn[d] = constraint_workspace + d*D1D
|
||||
+ 2*sDIM*D1D;
|
||||
}
|
||||
|
||||
MFEM_FOREACH_THREAD(j,x,D1D*sDIM)
|
||||
{
|
||||
// utilized first D1D threads
|
||||
edge = get_edge(elx, wtend, ei,
|
||||
constraint_workspace, edge_init, j,
|
||||
D1D);
|
||||
// One thread per physical component and edge DOF.
|
||||
get_edge(elx, wtend, ei, edge_init, j, D1D, edge);
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
@@ -1045,7 +949,15 @@ static void FindPointsSurfLocal3D_Kernel(const int npt,
|
||||
steep *= tmp->r[dn];
|
||||
if (steep<0)
|
||||
{
|
||||
newton_face( fpt,jac,hes,resid,tmp->flags&CONVERGED_FLAG,tmp,tol);
|
||||
double face_hes[3] =
|
||||
{
|
||||
dn == 0 ? hes[2] : hes[0],
|
||||
hes[1],
|
||||
dn == 0 ? hes[0] : hes[2]
|
||||
};
|
||||
newton_face(fpt, jac, face_hes, resid,
|
||||
tmp->flags & CONVERGED_FLAG,
|
||||
tmp, tol);
|
||||
}
|
||||
else
|
||||
{
|
||||
@@ -1211,29 +1123,42 @@ void FindPointsGSLIB::FindPointsSurfLocal3(const Vector &point_pos,
|
||||
auto pgll1d = DEV.gll1d.ReadWrite(use_dev);
|
||||
auto plc = DEV.lagcoeff.Read(use_dev);
|
||||
double dist2tol = DEV.surf_dist_tol;
|
||||
const bool obb_chk = obb_check;
|
||||
|
||||
switch (DEV.dof1d)
|
||||
{
|
||||
case 2:
|
||||
return FindPointsSurfLocal3D_Kernel<2>(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
FindPointsSurfLocal3DKernel<2>(npt, DEV.newt_tol, dist2tol,
|
||||
pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
case 3:
|
||||
return FindPointsSurfLocal3D_Kernel<3>(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
FindPointsSurfLocal3DKernel<3>(npt, DEV.newt_tol, dist2tol,
|
||||
pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
case 4:
|
||||
return FindPointsSurfLocal3D_Kernel<4>(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc);
|
||||
FindPointsSurfLocal3DKernel<4>(npt, DEV.newt_tol, dist2tol,
|
||||
pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc);
|
||||
break;
|
||||
default:
|
||||
return FindPointsSurfLocal3D_Kernel(
|
||||
npt, DEV.newt_tol, dist2tol, pp, point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, DEV.lh_nx, plhm, plhf,
|
||||
plho, pcode, pelem, pref, pdist, pgll1d, plc, DEV.dof1d);
|
||||
FindPointsSurfLocal3DKernel(npt, DEV.newt_tol, dist2tol, pp,
|
||||
point_pos_ordering, pgslm,
|
||||
NE_split_total, pwt, pbb, obb_chk,
|
||||
DEV.lh_nx, plhm, plhf, plho,
|
||||
pcode, pelem, pref, pdist,
|
||||
pgll1d, plc, DEV.dof1d);
|
||||
break;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@@ -0,0 +1,190 @@
|
||||
#ifndef MFEM_GSLIB_KERNEL_HELPERS_HPP
|
||||
#define MFEM_GSLIB_KERNEL_HELPERS_HPP
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
|
||||
#include <cmath>
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
namespace gslib
|
||||
{
|
||||
|
||||
struct dbl_range_t
|
||||
{
|
||||
double min, max;
|
||||
};
|
||||
|
||||
template <int SDIM>
|
||||
struct obbox_t
|
||||
{
|
||||
double c0[SDIM], A[SDIM * SDIM];
|
||||
dbl_range_t x[SDIM];
|
||||
};
|
||||
|
||||
template <int SDIM>
|
||||
struct findptsLocalHashData_t
|
||||
{
|
||||
int hash_n;
|
||||
dbl_range_t bnd[SDIM];
|
||||
double fac[SDIM];
|
||||
unsigned int *offset;
|
||||
};
|
||||
|
||||
// Eval the ith Lagrange interpolant at x.
|
||||
MFEM_HOST_DEVICE inline void lagrange_eval(double *p0, double x,
|
||||
int i, int p_Nq,
|
||||
double *z, double *lagrangeCoeff)
|
||||
{
|
||||
double p_i = (1 << (p_Nq - 1));
|
||||
for (int j = 0; j < p_Nq; ++j)
|
||||
{
|
||||
const double d_j = x - z[j];
|
||||
p_i *= j == i ? 1 : d_j;
|
||||
}
|
||||
p0[i] = lagrangeCoeff[i] * p_i;
|
||||
}
|
||||
|
||||
// Eval the ith Lagrange interpolant and its first derivative at x.
|
||||
MFEM_HOST_DEVICE inline void lag_eval_first_der(double *p0, double x,
|
||||
int i, const double *z,
|
||||
const double *lCoeff,
|
||||
int pN)
|
||||
{
|
||||
double u0 = 1, u1 = 0;
|
||||
for (int j = 0; j < pN; ++j)
|
||||
{
|
||||
if (i != j)
|
||||
{
|
||||
const double d_j = 2 * (x - z[j]);
|
||||
u1 = d_j * u1 + u0;
|
||||
u0 = d_j * u0;
|
||||
}
|
||||
}
|
||||
p0[i] = lCoeff[i] * u0;
|
||||
p0[pN + i] = 2.0 * lCoeff[i] * u1;
|
||||
}
|
||||
|
||||
// Eval the ith Lagrange interpolant and its first and second derivative at x.
|
||||
MFEM_HOST_DEVICE inline void lag_eval_second_der(double *p0, double x,
|
||||
int i, const double *z,
|
||||
const double *lCoeff,
|
||||
int pN)
|
||||
{
|
||||
double u0 = 1, u1 = 0, u2 = 0;
|
||||
for (int j = 0; j < pN; ++j)
|
||||
{
|
||||
if (i != j)
|
||||
{
|
||||
const double d_j = 2 * (x - z[j]);
|
||||
u2 = d_j * u2 + u1;
|
||||
u1 = d_j * u1 + u0;
|
||||
u0 = d_j * u0;
|
||||
}
|
||||
}
|
||||
p0[i] = lCoeff[i] * u0;
|
||||
p0[pN + i] = 2.0 * lCoeff[i] * u1;
|
||||
p0[2 * pN + i] = 8.0 * lCoeff[i] * u2;
|
||||
}
|
||||
|
||||
// Solve Ax=y where A is a symmetric 2x2 matrix packed as {a00, a01, a11}.
|
||||
MFEM_HOST_DEVICE inline void lin_solve_sym_2(double x[2],
|
||||
const double A[3],
|
||||
const double y[2])
|
||||
{
|
||||
const double idet = 1 / (A[0] * A[2] - A[1] * A[1]);
|
||||
x[0] = idet * (A[2] * y[0] - A[1] * y[1]);
|
||||
x[1] = idet * (A[0] * y[1] - A[1] * y[0]);
|
||||
}
|
||||
|
||||
// Positive when the point is inside the axis-aligned bounding box.
|
||||
template <int SDIM>
|
||||
MFEM_HOST_DEVICE inline double AABB_test(const obbox_t<SDIM> *const b,
|
||||
const double (&x)[SDIM])
|
||||
{
|
||||
double test = 1.0;
|
||||
for (int d = 0; d < SDIM; ++d)
|
||||
{
|
||||
const double b_d = (x[d] - b->x[d].min) * (b->x[d].max - x[d]);
|
||||
test = test < 0.0 ? test : b_d;
|
||||
}
|
||||
return test;
|
||||
}
|
||||
|
||||
// Positive when the point is inside the oriented bounding box.
|
||||
template <int SDIM>
|
||||
MFEM_HOST_DEVICE inline double bbox_test(const obbox_t<SDIM> *const b,
|
||||
const double (&x)[SDIM])
|
||||
{
|
||||
const double bxyz = AABB_test(b, x);
|
||||
if (bxyz < 0.0)
|
||||
{
|
||||
return bxyz;
|
||||
}
|
||||
|
||||
double dxyz[SDIM];
|
||||
for (int d = 0; d < SDIM; ++d)
|
||||
{
|
||||
dxyz[d] = x[d] - b->c0[d];
|
||||
}
|
||||
|
||||
double test = 1.0;
|
||||
for (int d = 0; d < SDIM; ++d)
|
||||
{
|
||||
double rst = 0.0;
|
||||
for (int e = 0; e < SDIM; ++e)
|
||||
{
|
||||
rst += b->A[d * SDIM + e] * dxyz[e];
|
||||
}
|
||||
const double brst = (rst + 1.0) * (1.0 - rst);
|
||||
test = test < 0.0 ? test : brst;
|
||||
}
|
||||
return test;
|
||||
}
|
||||
|
||||
// Hash index in the hash table for the point x.
|
||||
template <int SDIM>
|
||||
MFEM_HOST_DEVICE inline int hash_index(
|
||||
const findptsLocalHashData_t<SDIM> *const p,
|
||||
const double (&x)[SDIM])
|
||||
{
|
||||
const int n = p->hash_n;
|
||||
int sum = 0;
|
||||
for (int d = SDIM - 1; d >= 0; --d)
|
||||
{
|
||||
sum *= n;
|
||||
const int i = (int)floor((x[d] - p->bnd[d].min) * p->fac[d]);
|
||||
sum += i < 0 ? 0 : (n - 1 < i ? n - 1 : i);
|
||||
}
|
||||
return sum;
|
||||
}
|
||||
|
||||
// Squared Euclidean norm.
|
||||
template <int SDIM>
|
||||
MFEM_HOST_DEVICE inline double l2norm2(const double (&x)[SDIM])
|
||||
{
|
||||
double sum = 0.0;
|
||||
for (int d = 0; d < SDIM; ++d)
|
||||
{
|
||||
sum += x[d] * x[d];
|
||||
}
|
||||
return sum;
|
||||
}
|
||||
|
||||
template <int SDIM>
|
||||
MFEM_HOST_DEVICE inline double l2norm2(const double *x)
|
||||
{
|
||||
double sum = 0.0;
|
||||
for (int d = 0; d < SDIM; ++d)
|
||||
{
|
||||
sum += x[d] * x[d];
|
||||
}
|
||||
return sum;
|
||||
}
|
||||
|
||||
} // namespace gslib
|
||||
|
||||
} // namespace mfem
|
||||
|
||||
#endif
|
||||
@@ -11,7 +11,7 @@
|
||||
|
||||
#include "../gslib.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/kernels.hpp"
|
||||
#include "gslib_kernel_helpers.hpp"
|
||||
|
||||
#ifdef MFEM_USE_GSLIB
|
||||
|
||||
@@ -33,17 +33,7 @@ namespace mfem
|
||||
#define CODE_BORDER 1
|
||||
#define CODE_NOT_FOUND 2
|
||||
|
||||
static MFEM_HOST_DEVICE void lagrange_eval(double *p0, double x,
|
||||
int i, int p_Nq,
|
||||
double *z, double *lagrangeCoeff)
|
||||
{
|
||||
double p_i = (1 << (p_Nq - 1));
|
||||
for (int j=0; j<p_Nq; ++j)
|
||||
{
|
||||
p_i *= j==i ? 1 : x-z[j];
|
||||
}
|
||||
p0[i] = lagrangeCoeff[i] * p_i;
|
||||
}
|
||||
using gslib::lagrange_eval;
|
||||
|
||||
template<int T_D1D = 0>
|
||||
static void InterpolateLocal1DKernel(const double *const gf_in,
|
||||
@@ -123,21 +113,26 @@ void FindPointsGSLIB::InterpolateLocal1( const Vector &field_in,
|
||||
auto plcf = DEV.lagcoeff_sol.ReadWrite(use_dev);
|
||||
switch (dof1Dsol)
|
||||
{
|
||||
case 2: return InterpolateLocal1DKernel<2>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
case 3: return InterpolateLocal1DKernel<3>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
case 4: return InterpolateLocal1DKernel<4>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
case 5: return InterpolateLocal1DKernel<5>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
default: return InterpolateLocal1DKernel(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf, dof1Dsol);
|
||||
case 2:
|
||||
InterpolateLocal1DKernel<2>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
case 3:
|
||||
InterpolateLocal1DKernel<3>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
case 4:
|
||||
InterpolateLocal1DKernel<4>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
case 5:
|
||||
InterpolateLocal1DKernel<5>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
default:
|
||||
InterpolateLocal1DKernel(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf, dof1Dsol);
|
||||
break;
|
||||
}
|
||||
}
|
||||
#undef CODE_INTERNAL
|
||||
|
||||
@@ -11,6 +11,7 @@
|
||||
|
||||
#include "../gslib.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "gslib_kernel_helpers.hpp"
|
||||
|
||||
#ifdef MFEM_USE_GSLIB
|
||||
|
||||
@@ -32,18 +33,7 @@ namespace mfem
|
||||
#define CODE_BORDER 1
|
||||
#define CODE_NOT_FOUND 2
|
||||
|
||||
static MFEM_HOST_DEVICE void lagrange_eval(double *p0, double x,
|
||||
int i, int p_Nq,
|
||||
double *z, double *lagrangeCoeff)
|
||||
{
|
||||
double p_i = (1 << (p_Nq - 1));
|
||||
for (int j = 0; j < p_Nq; ++j)
|
||||
{
|
||||
double d_j = x - z[j];
|
||||
p_i *= j == i ? 1 : d_j;
|
||||
}
|
||||
p0[i] = lagrangeCoeff[i] * p_i;
|
||||
}
|
||||
using gslib::lagrange_eval;
|
||||
|
||||
template<int T_D1D = 0>
|
||||
static void InterpolateLocal2DKernel(const double *const gf_in,
|
||||
@@ -132,21 +122,26 @@ void FindPointsGSLIB::InterpolateLocal2(const Vector &field_in,
|
||||
auto plcf = DEV.lagcoeff_sol.ReadWrite(use_dev);
|
||||
switch (dof1Dsol)
|
||||
{
|
||||
case 2: return InterpolateLocal2DKernel<2>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
case 3: return InterpolateLocal2DKernel<3>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
case 4: return InterpolateLocal2DKernel<4>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
case 5: return InterpolateLocal2DKernel<5>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
default: return InterpolateLocal2DKernel(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf, dof1Dsol);
|
||||
case 2:
|
||||
InterpolateLocal2DKernel<2>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
case 3:
|
||||
InterpolateLocal2DKernel<3>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
case 4:
|
||||
InterpolateLocal2DKernel<4>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
case 5:
|
||||
InterpolateLocal2DKernel<5>(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
default:
|
||||
InterpolateLocal2DKernel(pfin, pgsl, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf, dof1Dsol);
|
||||
break;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@@ -11,6 +11,7 @@
|
||||
|
||||
#include "../gslib.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "gslib_kernel_helpers.hpp"
|
||||
|
||||
#ifdef MFEM_USE_GSLIB
|
||||
|
||||
@@ -32,18 +33,7 @@ namespace mfem
|
||||
#define CODE_BORDER 1
|
||||
#define CODE_NOT_FOUND 2
|
||||
|
||||
static MFEM_HOST_DEVICE void lagrange_eval(double *p0, double x,
|
||||
int i, int p_Nq,
|
||||
double *z, double *lagrangeCoeff)
|
||||
{
|
||||
double p_i = (1 << (p_Nq - 1));
|
||||
for (int j = 0; j < p_Nq; ++j)
|
||||
{
|
||||
double d_j = x - z[j];
|
||||
p_i *= j == i ? 1 : d_j;
|
||||
}
|
||||
p0[i] = lagrangeCoeff[i] * p_i;
|
||||
}
|
||||
using gslib::lagrange_eval;
|
||||
|
||||
template<int T_D1D = 0>
|
||||
static void InterpolateLocal3DKernel(const double *const gf_in,
|
||||
@@ -135,21 +125,26 @@ void FindPointsGSLIB::InterpolateLocal3(const Vector &field_in,
|
||||
auto plcf = DEV.lagcoeff_sol.ReadWrite(use_dev);
|
||||
switch (dof1Dsol)
|
||||
{
|
||||
case 2: return InterpolateLocal3DKernel<2>(pfin, pgsle, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
case 3: return InterpolateLocal3DKernel<3>(pfin, pgsle, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
case 4: return InterpolateLocal3DKernel<4>(pfin, pgsle, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
case 5: return InterpolateLocal3DKernel<5>(pfin, pgsle, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf);
|
||||
default: return InterpolateLocal3DKernel(pfin, pgsle, pgslr, pfout,
|
||||
npt, ncomp,
|
||||
pgll, plcf, dof1Dsol);
|
||||
case 2:
|
||||
InterpolateLocal3DKernel<2>(pfin, pgsle, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
case 3:
|
||||
InterpolateLocal3DKernel<3>(pfin, pgsle, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
case 4:
|
||||
InterpolateLocal3DKernel<4>(pfin, pgsle, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
case 5:
|
||||
InterpolateLocal3DKernel<5>(pfin, pgsle, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf);
|
||||
break;
|
||||
default:
|
||||
InterpolateLocal3DKernel(pfin, pgsle, pgslr, pfout,
|
||||
npt, ncomp, pgll, plcf, dof1Dsol);
|
||||
break;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@@ -368,6 +368,8 @@ void HybridizationExtension::ConstructH()
|
||||
|
||||
CAhatInvCt = 0.0;
|
||||
|
||||
// Fill the face-to-face adjacency array. Two faces are adjacent if they are
|
||||
// incident to a common element.
|
||||
mfem::forall(nf, [=] MFEM_HOST_DEVICE (int fi)
|
||||
{
|
||||
const int begin_f = d_face_face_offsets[fi];
|
||||
@@ -403,6 +405,12 @@ void HybridizationExtension::ConstructH()
|
||||
}
|
||||
}
|
||||
}
|
||||
// Fill unused entries with -1 to indicate invalid
|
||||
const int end_f = d_face_face_offsets[fi + 1];
|
||||
for (int i = begin_f + idx; i < end_f; ++i)
|
||||
{
|
||||
d_face_to_face[i] = -1;
|
||||
}
|
||||
});
|
||||
|
||||
mfem::forall(nf, [=] MFEM_HOST_DEVICE (int fi)
|
||||
@@ -412,6 +420,7 @@ void HybridizationExtension::ConstructH()
|
||||
for (int idx_j = begin; idx_j < end; ++idx_j)
|
||||
{
|
||||
const int fj = d_face_to_face[idx_j];
|
||||
if (fj < 0) { break; }
|
||||
for (int ei = 0; ei < 2; ++ei)
|
||||
{
|
||||
const int e = d_face_to_el(0, ei, fi);
|
||||
|
||||
@@ -178,6 +178,8 @@ void ConvectionIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
// Assumes tensor-product elements
|
||||
Mesh *mesh = fes.GetMesh();
|
||||
const FiniteElement &el = *fes.GetTypicalFE();
|
||||
MFEM_VERIFY(el.GetMapType() == FiniteElement::VALUE,
|
||||
"Only value map type currently supported");
|
||||
ElementTransformation &Trans = *mesh->GetTypicalElementTransformation();
|
||||
const IntegrationRule *ir = IntRule ? IntRule : &GetRule(el, Trans);
|
||||
if (DeviceCanUseCeed())
|
||||
|
||||
@@ -91,15 +91,15 @@ void ElasticityAddMultPA(const int dim, const int nDofs,
|
||||
void ElasticityAssembleDiagonalPA(const int dim, const int nDofs,
|
||||
const CoefficientVector &lambda,
|
||||
const CoefficientVector &mu, const GeometricFactors &geom,
|
||||
const DofToQuad &maps, QuadratureFunction &QVec, Vector &diag)
|
||||
const DofToQuad &maps, const IntegrationRule &ir, Vector &diag)
|
||||
{
|
||||
switch (dim)
|
||||
{
|
||||
case 2:
|
||||
ElasticityAssembleDiagonalPA_<2>(nDofs, lambda, mu, geom, maps, QVec, diag);
|
||||
ElasticityAssembleDiagonalPA_<2>(nDofs, lambda, mu, geom, maps, ir, diag);
|
||||
break;
|
||||
case 3:
|
||||
ElasticityAssembleDiagonalPA_<3>(nDofs, lambda, mu, geom, maps, QVec, diag);
|
||||
ElasticityAssembleDiagonalPA_<3>(nDofs, lambda, mu, geom, maps, ir, diag);
|
||||
break;
|
||||
default:
|
||||
MFEM_ABORT("Only dimensions 2 and 3 supported.");
|
||||
|
||||
@@ -38,7 +38,6 @@
|
||||
#include "../../linalg/vector.hpp"
|
||||
#include "../../linalg/tensor.hpp"
|
||||
#include "../quadinterpolator.hpp"
|
||||
#include "../bilininteg.hpp"
|
||||
#include "../coefficient.hpp"
|
||||
#include "../qfunction.hpp"
|
||||
|
||||
@@ -133,12 +132,12 @@ void ElasticityAssembleEA(const int dim, const int i_block, const int j_block,
|
||||
/// @param[in] mu Quadrature function for second Lame param.
|
||||
/// @param[in] geom Geometric factors corresponding to fespace.
|
||||
/// @param[in] maps DofToQuad maps for one element (assume elements all same).
|
||||
/// @param QVec Scratch Q-Vector. nQuad x dim x dim x dim x dim x numEls.
|
||||
/// @param[in] ir Integration rule.
|
||||
/// @param[out] diag diagonal of A. nDofs x dim x numEls.
|
||||
void ElasticityAssembleDiagonalPA(const int dim, const int nDofs,
|
||||
const CoefficientVector &lambda,
|
||||
const CoefficientVector &mu, const GeometricFactors &geom,
|
||||
const DofToQuad &maps, QuadratureFunction &QVec, Vector &diag);
|
||||
const DofToQuad &maps, const IntegrationRule &ir, Vector &diag);
|
||||
|
||||
/// Templated implementation of ElasticityAddMultPA.
|
||||
template<int dim, int i_block = -1, int j_block = -1>
|
||||
@@ -280,77 +279,67 @@ void ElasticityAddMultPA_(const int nDofs, const FiniteElementSpace &fespace,
|
||||
template<int dim>
|
||||
void ElasticityAssembleDiagonalPA_(const int nDofs,
|
||||
const CoefficientVector &lambda,
|
||||
const CoefficientVector &mu, const GeometricFactors &geom,
|
||||
const DofToQuad &maps, QuadratureFunction &QVec, Vector &diag)
|
||||
const CoefficientVector &mu,
|
||||
const GeometricFactors &geom,
|
||||
const DofToQuad &maps,
|
||||
const IntegrationRule &ir,
|
||||
Vector &diag)
|
||||
{
|
||||
using future::tensor;
|
||||
using future::make_tensor;
|
||||
using future::det;
|
||||
using future::inv;
|
||||
using future::make_tensor;
|
||||
using future::tensor;
|
||||
|
||||
// Assuming all elements are the same
|
||||
const auto &ir = QVec.GetIntRule(0);
|
||||
static constexpr int d = dim;
|
||||
const int numPoints = ir.GetNPoints();
|
||||
const int numEls = lambda.Size()/numPoints;
|
||||
const int numEls = lambda.Size() / numPoints;
|
||||
|
||||
const auto lamDev = Reshape(lambda.Read(), numPoints, numEls);
|
||||
const auto muDev = Reshape(mu.Read(), numPoints, numEls);
|
||||
const auto J = Reshape(geom.J.Read(), numPoints, d, d, numEls);
|
||||
auto Q = Reshape(QVec.ReadWrite(), numPoints, d,d, d, numEls);
|
||||
const real_t *ipWeights = ir.GetWeights().Read();
|
||||
mfem::forall_2D(numEls, numPoints,1, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(p, x,numPoints)
|
||||
{
|
||||
auto invJ = inv(make_tensor<d, d>(
|
||||
[&](int i, int j) { return J(p, i, j, e); }));
|
||||
const real_t w = ipWeights[p] /det(invJ);
|
||||
for (int n = 0; n < d; n++)
|
||||
{
|
||||
for (int m = 0; m < d; m++)
|
||||
{
|
||||
for (int q = 0; q < d; q++)
|
||||
{
|
||||
// compute contraction of 4*sym(grad(u))sym(grad(v)) term.
|
||||
// this contraction could be made slightly cheaper using Voigt
|
||||
// notation, but repeated entries are summed for simplicity.
|
||||
real_t contraction = 0.;
|
||||
for (int a = 0; a < d; a++)
|
||||
{
|
||||
for (int b = 0; b < d; b++)
|
||||
{
|
||||
contraction += ((a == q)*invJ(m,b) + (b==q)*invJ(m,a))*((a == q)
|
||||
*invJ(n, b) + (b==q)*invJ(n,a));
|
||||
}
|
||||
}
|
||||
// lambda*div(u)*div(v) + 2*mu*sym(grad(u))*sym(grad(v))
|
||||
// contraction = 4*sym(grad(u))sym(grad(v))
|
||||
Q(p,m,n,q,e) = w*(lamDev(p, e)*invJ(m,q)*invJ(n,q)
|
||||
+ 0.5*muDev(p, e)*contraction);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
|
||||
// Reduce quadrature function to an E-Vector
|
||||
const auto QRead = Reshape(QVec.Read(), numPoints, d, d, d, numEls);
|
||||
auto diagDev = Reshape(diag.Write(), nDofs, d, numEls);
|
||||
const auto G = Reshape(maps.G.Read(), numPoints, d, nDofs);
|
||||
auto diagDev = Reshape(diag.Write(), nDofs, d, numEls);
|
||||
|
||||
mfem::forall_2D(numEls, d, nDofs, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(i, y, nDofs)
|
||||
MFEM_FOREACH_THREAD_DIRECT(i, y, nDofs)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(q, x, d)
|
||||
MFEM_FOREACH_THREAD_DIRECT(q, x, d)
|
||||
{
|
||||
real_t sum = 0.;
|
||||
for (int n = 0; n < d; n++)
|
||||
real_t sum = 0.0;
|
||||
for (int p = 0; p < numPoints; p++)
|
||||
{
|
||||
for (int m = 0; m < d; m++)
|
||||
const auto invJ = inv(make_tensor<d, d>([&](int r, int c)
|
||||
{
|
||||
for (int p = 0; p < numPoints; p++ )
|
||||
return J(p, r, c, e);
|
||||
}));
|
||||
const real_t w = ipWeights[p] / det(invJ);
|
||||
|
||||
for (int n = 0; n < d; n++)
|
||||
{
|
||||
for (int m = 0; m < d; m++)
|
||||
{
|
||||
sum += QRead(p,m,n,q,e)*G(p,m,i)*G(p,n,i);
|
||||
// compute contraction of 4*sym(grad(u))sym(grad(v)) term.
|
||||
// this contraction could be made slightly cheaper using Voigt
|
||||
// notation, but repeated entries are summed for simplicity.
|
||||
real_t contraction = 0.0;
|
||||
for (int a = 0; a < d; a++)
|
||||
{
|
||||
for (int b = 0; b < d; b++)
|
||||
{
|
||||
contraction +=
|
||||
((a == q) * invJ(m, b) + (b == q) * invJ(m, a)) *
|
||||
((a == q) * invJ(n, b) + (b == q) * invJ(n, a));
|
||||
}
|
||||
}
|
||||
// lambda*div(u)*div(v) + 2*mu*sym(grad(u))*sym(grad(v))
|
||||
// contraction = 4*sym(grad(u))sym(grad(v))
|
||||
const real_t Q =
|
||||
w * (lamDev(p, e) * invJ(m, q) * invJ(n, q)
|
||||
+ 0.5 * muDev(p, e) * contraction);
|
||||
sum += Q * G(p, m, i) * G(p, n, i);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@@ -10,7 +10,6 @@
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "../bilininteg.hpp"
|
||||
#include "../gridfunc.hpp"
|
||||
#include "../qfunction.hpp"
|
||||
#include "bilininteg_elasticity_kernels.hpp"
|
||||
|
||||
@@ -59,9 +58,8 @@ void ElasticityIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
|
||||
void ElasticityIntegrator::AssembleDiagonalPA(Vector &diag)
|
||||
{
|
||||
q_vec->SetVDim(vdim*vdim*vdim*vdim);
|
||||
internal::ElasticityAssembleDiagonalPA(vdim, ndofs, *lambda_quad, *mu_quad,
|
||||
*geom, *maps, *q_vec, diag);
|
||||
*geom, *maps, *IntRule, diag);
|
||||
}
|
||||
|
||||
void ElasticityIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
|
||||
@@ -148,11 +148,12 @@ void PAHcurlMassAssembleDiagonal3D(const int D1D,
|
||||
}
|
||||
|
||||
void PAHcurlMassApply2D(const int NE, const bool symmetric,
|
||||
const bool scalar_coeff, const Array<real_t> &bo,
|
||||
const Array<real_t> &bc, const Array<real_t> &bot,
|
||||
const Array<real_t> &bct, const Vector &pa_data,
|
||||
const Vector &x, Vector &y, const int D1D,
|
||||
const int TestD1D, const int Q1D)
|
||||
[[maybe_unused]] const bool scalar_coeff,
|
||||
const Array<real_t> &bo, const Array<real_t> &bc,
|
||||
const Array<real_t> &bot, const Array<real_t> &bct,
|
||||
const Vector &pa_data, const Vector &x, Vector &y,
|
||||
const int D1D, [[maybe_unused]] const int TestD1D,
|
||||
const int Q1D)
|
||||
{
|
||||
MFEM_ASSERT(D1D == TestD1D,
|
||||
"Trial and Test space must have the same number of dofs");
|
||||
@@ -275,11 +276,12 @@ void PAHcurlMassApply2D(const int NE, const bool symmetric,
|
||||
}
|
||||
|
||||
void PAHcurlMassApply3D(const int NE, const bool symmetric,
|
||||
const bool scalar_coeff, const Array<real_t> &bo,
|
||||
const Array<real_t> &bc, const Array<real_t> &bot,
|
||||
const Array<real_t> &bct, const Vector &pa_data,
|
||||
const Vector &x, Vector &y, const int D1D,
|
||||
const int TestD1D, const int Q1D)
|
||||
[[maybe_unused]] const bool scalar_coeff,
|
||||
const Array<real_t> &bo, const Array<real_t> &bc,
|
||||
const Array<real_t> &bot, const Array<real_t> &bct,
|
||||
const Vector &pa_data, const Vector &x, Vector &y,
|
||||
const int D1D, [[maybe_unused]] const int TestD1D,
|
||||
const int Q1D)
|
||||
{
|
||||
MFEM_VERIFY(D1D == TestD1D,
|
||||
"Trial and test spaces must have same number of dofs");
|
||||
@@ -783,6 +785,23 @@ void PAHcurlL2Setup2D(const int Q1D,
|
||||
});
|
||||
}
|
||||
|
||||
void PAHcurlL2IntSetup2D(const int Q1D, const int NE, const Array<real_t> &w,
|
||||
Vector &coeff, const Vector &detJ, Vector &op)
|
||||
{
|
||||
const int NQ = Q1D*Q1D;
|
||||
auto W = w.Read();
|
||||
auto C = Reshape(coeff.Read(), NQ, NE);
|
||||
auto J = Reshape(detJ.Read(), NQ, NE);
|
||||
auto y = Reshape(op.Write(), NQ, NE);
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
for (int q = 0; q < NQ; ++q)
|
||||
{
|
||||
y(q,e) = W[q] * C(q,e) / J(q,e);
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
void PAHcurlL2Setup3D(const int NQ,
|
||||
const int coeffDim,
|
||||
const int NE,
|
||||
|
||||
@@ -190,19 +190,22 @@ void PAHcurlMassApply2D(const int NE, const bool symmetric,
|
||||
|
||||
// PA H(curl) Mass Apply 3D kernel
|
||||
void PAHcurlMassApply3D(const int NE, const bool symmetric,
|
||||
const bool scalar_coeff, const Array<real_t> &bo,
|
||||
const Array<real_t> &bc, const Array<real_t> &bot,
|
||||
const Array<real_t> &bct, const Vector &pa_data,
|
||||
const Vector &x, Vector &y, const int TrialD1D,
|
||||
const int TestD1D, const int Q1D);
|
||||
[[maybe_unused]] const bool scalar_coeff,
|
||||
const Array<real_t> &bo, const Array<real_t> &bc,
|
||||
const Array<real_t> &bot, const Array<real_t> &bct,
|
||||
const Vector &pa_data, const Vector &x, Vector &y,
|
||||
const int TrialD1D, [[maybe_unused]] const int TestD1D,
|
||||
const int Q1D);
|
||||
|
||||
// Shared memory PA H(curl) Mass Apply 3D kernel
|
||||
template <int T_D1D = 0, int T_Q1D = 0, int TBATCH = 0, bool ACCUMULATE = true>
|
||||
inline void SmemPAHcurlMassApply3D(
|
||||
const int NE, const bool symmetric, const bool scalar_coeff,
|
||||
const Array<real_t> &bo, const Array<real_t> &bc, const Array<real_t> &bot,
|
||||
const Array<real_t> &bct, const Vector &pa_data, const Vector &x, Vector &y,
|
||||
const int d1d = 0, const int = 0, const int q1d = 0)
|
||||
const int NE, const bool symmetric, [[maybe_unused]] const bool scalar_coeff,
|
||||
const Array<real_t> &bo, const Array<real_t> &bc,
|
||||
[[maybe_unused]] const Array<real_t> &bot,
|
||||
[[maybe_unused]] const Array<real_t> &bct, const Vector &pa_data,
|
||||
const Vector &x, Vector &y, const int d1d = 0,
|
||||
[[maybe_unused]] const int test_d1d = 0, const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -1886,13 +1889,17 @@ inline void SmemPACurlCurlApply3D(const int d1d,
|
||||
ForallWrap<3>(true, NE, device_kernel, host_kernel, Q1D, Q1D, Q1D);
|
||||
}
|
||||
|
||||
// PA H(curl)-L2 Assemble 2D kernel
|
||||
// PA H(curl)-L2 value Assemble 2D kernel
|
||||
void PAHcurlL2Setup2D(const int Q1D,
|
||||
const int NE,
|
||||
const Array<real_t> &w,
|
||||
Vector &coeff,
|
||||
Vector &op);
|
||||
|
||||
// PA H(curl)-L2 integral Assemble 2D kernel
|
||||
void PAHcurlL2IntSetup2D(const int Q1D, const int NE, const Array<real_t> &w,
|
||||
Vector &coeff, const Vector &detJ, Vector &op);
|
||||
|
||||
// PA H(curl)-L2 Assemble 3D kernel
|
||||
void PAHcurlL2Setup3D(const int NQ,
|
||||
const int coeffDim,
|
||||
|
||||
@@ -19,6 +19,213 @@
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
namespace
|
||||
{
|
||||
|
||||
void PAHcurlApplyCurl2D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Gc_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto Bo = Reshape(Bo_.Read(), o_dofs1D, o_dofs1D);
|
||||
auto Gc = Reshape(Gc_.Read(), o_dofs1D, c_dofs1D);
|
||||
auto X = Reshape(x_.Read(), 2 * c_dofs1D * o_dofs1D, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), o_dofs1D, o_dofs1D, NE);
|
||||
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
for (int iy = 0; iy < c_dofs1D; ++iy)
|
||||
{
|
||||
for (int ix = 0; ix < o_dofs1D; ++ix)
|
||||
{
|
||||
const real_t xv = X(ix + iy * o_dofs1D, e);
|
||||
for (int oy = 0; oy < o_dofs1D; ++oy)
|
||||
{
|
||||
const real_t gy = Gc(oy, iy);
|
||||
for (int ox = 0; ox < o_dofs1D; ++ox)
|
||||
{
|
||||
Y(ox, oy, e) -= Bo(ox, ix) * gy * xv;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
const int y_nd = c_dofs1D * o_dofs1D;
|
||||
for (int iy = 0; iy < o_dofs1D; ++iy)
|
||||
{
|
||||
for (int ix = 0; ix < c_dofs1D; ++ix)
|
||||
{
|
||||
const real_t xv = X(y_nd + ix + iy * c_dofs1D, e);
|
||||
for (int oy = 0; oy < o_dofs1D; ++oy)
|
||||
{
|
||||
const real_t by = Bo(oy, iy);
|
||||
for (int ox = 0; ox < o_dofs1D; ++ox)
|
||||
{
|
||||
Y(ox, oy, e) += Gc(ox, ix) * by * xv;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
void PAHcurlApplyCurlTranspose2D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Gc_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto Bo = Reshape(Bo_.Read(), o_dofs1D, o_dofs1D);
|
||||
auto Gc = Reshape(Gc_.Read(), o_dofs1D, c_dofs1D);
|
||||
auto X = Reshape(x_.Read(), o_dofs1D, o_dofs1D, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), 2 * c_dofs1D * o_dofs1D, NE);
|
||||
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
for (int dy = 0; dy < c_dofs1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < o_dofs1D; ++dx)
|
||||
{
|
||||
real_t sum = 0.0;
|
||||
for (int oy = 0; oy < o_dofs1D; ++oy)
|
||||
{
|
||||
const real_t gy = Gc(oy, dy);
|
||||
for (int ox = 0; ox < o_dofs1D; ++ox)
|
||||
{
|
||||
sum -= Bo(ox, dx) * gy * X(ox, oy, e);
|
||||
}
|
||||
}
|
||||
Y(dx + dy * o_dofs1D, e) += sum;
|
||||
}
|
||||
}
|
||||
|
||||
const int y_nd = c_dofs1D * o_dofs1D;
|
||||
for (int dy = 0; dy < o_dofs1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < c_dofs1D; ++dx)
|
||||
{
|
||||
real_t sum = 0.0;
|
||||
for (int oy = 0; oy < o_dofs1D; ++oy)
|
||||
{
|
||||
const real_t by = Bo(oy, dy);
|
||||
for (int ox = 0; ox < o_dofs1D; ++ox)
|
||||
{
|
||||
sum += Gc(ox, dx) * by * X(ox, oy, e);
|
||||
}
|
||||
}
|
||||
Y(y_nd + dx + dy * c_dofs1D, e) += sum;
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
void PAHdivApplyCurl2D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Gc_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto Bc = Reshape(Bc_.Read(), c_dofs1D, c_dofs1D);
|
||||
auto Gc = Reshape(Gc_.Read(), o_dofs1D, c_dofs1D);
|
||||
auto X = Reshape(x_.Read(), c_dofs1D, c_dofs1D, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), 2 * c_dofs1D * o_dofs1D, NE);
|
||||
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
for (int iy = 0; iy < c_dofs1D; ++iy)
|
||||
{
|
||||
for (int ix = 0; ix < c_dofs1D; ++ix)
|
||||
{
|
||||
const real_t xv = X(ix, iy, e);
|
||||
for (int oy = 0; oy < o_dofs1D; ++oy)
|
||||
{
|
||||
const real_t gy = Gc(oy, iy);
|
||||
for (int ox = 0; ox < c_dofs1D; ++ox)
|
||||
{
|
||||
Y(ox + oy * c_dofs1D, e) += Bc(ox, ix) * gy * xv;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
const int y_nd = c_dofs1D * o_dofs1D;
|
||||
for (int iy = 0; iy < c_dofs1D; ++iy)
|
||||
{
|
||||
for (int ix = 0; ix < c_dofs1D; ++ix)
|
||||
{
|
||||
const real_t xv = X(ix, iy, e);
|
||||
for (int oy = 0; oy < c_dofs1D; ++oy)
|
||||
{
|
||||
const real_t by = Bc(oy, iy);
|
||||
for (int ox = 0; ox < o_dofs1D; ++ox)
|
||||
{
|
||||
Y(y_nd + ox + oy * o_dofs1D, e) -= Gc(ox, ix) * by * xv;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
void PAHdivApplyCurlTranspose2D(const int c_dofs1D,
|
||||
const int o_dofs1D,
|
||||
const int NE,
|
||||
const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Gc_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
{
|
||||
auto Bc = Reshape(Bc_.Read(), c_dofs1D, c_dofs1D);
|
||||
auto Gc = Reshape(Gc_.Read(), o_dofs1D, c_dofs1D);
|
||||
auto X = Reshape(x_.Read(), 2 * c_dofs1D * o_dofs1D, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), c_dofs1D, c_dofs1D, NE);
|
||||
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
for (int dy = 0; dy < o_dofs1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < c_dofs1D; ++dx)
|
||||
{
|
||||
const real_t xv = X(dx + dy * c_dofs1D, e);
|
||||
for (int iy = 0; iy < c_dofs1D; ++iy)
|
||||
{
|
||||
const real_t gy = Gc(dy, iy);
|
||||
for (int ix = 0; ix < c_dofs1D; ++ix)
|
||||
{
|
||||
Y(ix, iy, e) += Bc(dx, ix) * gy * xv;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
const int y_nd = c_dofs1D * o_dofs1D;
|
||||
for (int dy = 0; dy < c_dofs1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < o_dofs1D; ++dx)
|
||||
{
|
||||
const real_t xv = X(y_nd + dx + dy * o_dofs1D, e);
|
||||
for (int iy = 0; iy < c_dofs1D; ++iy)
|
||||
{
|
||||
const real_t by = Bc(dy, iy);
|
||||
for (int ix = 0; ix < c_dofs1D; ++ix)
|
||||
{
|
||||
Y(ix, iy, e) -= Gc(dx, ix) * by * xv;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
// Apply to x corresponding to DOFs in H^1 (domain) the (topological) gradient
|
||||
// to get a dof in H(curl) (range). You can think of the range as the "test" space
|
||||
// and the domain as the "trial" space, but there's no integration.
|
||||
@@ -1955,15 +2162,101 @@ void IdentityInterpolator::AddMultTransposePA(const Vector &x, Vector &y) const
|
||||
void CurlInterpolator::AssemblePA(const FiniteElementSpace &dom_fes,
|
||||
const FiniteElementSpace &ran_fes)
|
||||
{
|
||||
// TODO: 1D and 2D meshes
|
||||
Mesh *mesh = dom_fes.GetMesh();
|
||||
dim = mesh->Dimension();
|
||||
ne = dom_fes.GetNE();
|
||||
pa_mode_2d = 0;
|
||||
MFEM_VERIFY(ne == ran_fes.GetNE(),
|
||||
"Different meshes for domain and range spaces");
|
||||
|
||||
if (dim == 2)
|
||||
{
|
||||
pa_data.SetSize(0);
|
||||
const FiniteElement *dom_fel = dom_fes.GetTypicalFE();
|
||||
const FiniteElement *ran_fel = ran_fes.GetTypicalFE();
|
||||
const bool hcurl_to_scalar =
|
||||
dynamic_cast<const VectorTensorFiniteElement*>(dom_fel) != NULL &&
|
||||
dom_fel->GetDerivType() == FiniteElement::CURL &&
|
||||
dynamic_cast<const TensorBasisElement*>(ran_fel) != NULL &&
|
||||
ran_fel->GetRangeType() == FiniteElement::SCALAR;
|
||||
const bool scalar_to_hdiv =
|
||||
dynamic_cast<const TensorBasisElement*>(dom_fel) != NULL &&
|
||||
dom_fel->GetRangeType() == FiniteElement::SCALAR &&
|
||||
dynamic_cast<const VectorTensorFiniteElement*>(ran_fel) != NULL &&
|
||||
ran_fel->GetDerivType() == FiniteElement::DIV;
|
||||
|
||||
MFEM_VERIFY(hcurl_to_scalar || scalar_to_hdiv,
|
||||
"2D CurlInterpolator PA supports H(curl)->scalar and scalar->H(div) only.");
|
||||
|
||||
int closed_basis_type = -1;
|
||||
int open_basis_type = -1;
|
||||
if (hcurl_to_scalar)
|
||||
{
|
||||
const auto *trial_fec = dynamic_cast<const ND_FECollection*>(dom_fes.FEColl());
|
||||
const auto *range_fec = dynamic_cast<const L2_FECollection*>(ran_fes.FEColl());
|
||||
MFEM_VERIFY(trial_fec != NULL, "H(curl) domain must use ND_FECollection.");
|
||||
MFEM_VERIFY(range_fec != NULL, "Scalar range must use L2_FECollection.");
|
||||
MFEM_VERIFY(ran_fel->GetMapType() == FiniteElement::INTEGRAL,
|
||||
"2D H(curl)->scalar CurlInterpolator PA supports integral-map scalar range spaces only.");
|
||||
closed_basis_type = trial_fec->GetClosedBasisType();
|
||||
open_basis_type = trial_fec->GetOpenBasisType();
|
||||
MFEM_VERIFY(range_fec->GetBasisType() == open_basis_type,
|
||||
"Domain/range open basis types do not match.");
|
||||
pa_mode_2d = 1;
|
||||
}
|
||||
else
|
||||
{
|
||||
const auto *trial_fec = dynamic_cast<const H1_FECollection*>(dom_fes.FEColl());
|
||||
const auto *range_fec = dynamic_cast<const RT_FECollection*>(ran_fes.FEColl());
|
||||
MFEM_VERIFY(trial_fec != NULL, "Scalar domain must use H1_FECollection.");
|
||||
MFEM_VERIFY(range_fec != NULL, "H(div) range must use RT_FECollection.");
|
||||
closed_basis_type = trial_fec->GetBasisType();
|
||||
open_basis_type = range_fec->GetOpenBasisType();
|
||||
MFEM_VERIFY(range_fec->GetClosedBasisType() == closed_basis_type,
|
||||
"Domain/range closed basis types do not match.");
|
||||
pa_mode_2d = 2;
|
||||
}
|
||||
|
||||
const int order = hcurl_to_scalar
|
||||
? dynamic_cast<const VectorTensorFiniteElement*>(dom_fel)->GetOrder()
|
||||
: dynamic_cast<const NodalTensorFiniteElement*>(dom_fel)->GetOrder();
|
||||
c_dofs1D = order + 1;
|
||||
o_dofs1D = order;
|
||||
|
||||
closed_dofquad_fe.reset(new H1_SegmentElement(order, closed_basis_type));
|
||||
open_dofquad_fe.reset(new L2_SegmentElement(order - 1, open_basis_type));
|
||||
|
||||
mfem::QuadratureFunctions1D qf1d;
|
||||
mfem::IntegrationRule closed_ir;
|
||||
closed_ir.SetSize(c_dofs1D);
|
||||
qf1d.GaussLobatto(c_dofs1D, &closed_ir);
|
||||
|
||||
mfem::IntegrationRule open_ir;
|
||||
open_ir.SetSize(o_dofs1D);
|
||||
qf1d.GaussLegendre(o_dofs1D, &open_ir);
|
||||
|
||||
maps_C_C = &closed_dofquad_fe->GetDofToQuad(closed_ir, DofToQuad::TENSOR);
|
||||
maps_O_C = &closed_dofquad_fe->GetDofToQuad(open_ir, DofToQuad::TENSOR);
|
||||
maps_O_O = &open_dofquad_fe->GetDofToQuad(open_ir, DofToQuad::TENSOR);
|
||||
|
||||
MFEM_VERIFY(maps_C_C->ndof == c_dofs1D && maps_C_C->nqpt == c_dofs1D, "");
|
||||
MFEM_VERIFY(maps_O_C->ndof == c_dofs1D && maps_O_C->nqpt == o_dofs1D, "");
|
||||
MFEM_VERIFY(maps_O_O->ndof == o_dofs1D && maps_O_O->nqpt == o_dofs1D, "");
|
||||
return;
|
||||
}
|
||||
|
||||
closed_dofquad_fe.reset();
|
||||
open_dofquad_fe.reset();
|
||||
maps_C_C = nullptr;
|
||||
maps_O_C = nullptr;
|
||||
maps_O_O = nullptr;
|
||||
|
||||
const VectorTensorFiniteElement *dom_el =
|
||||
dynamic_cast<const VectorTensorFiniteElement *>(dom_fes.GetTypicalFE());
|
||||
const VectorTensorFiniteElement *ran_el =
|
||||
dynamic_cast<const VectorTensorFiniteElement *>(ran_fes.GetTypicalFE());
|
||||
MFEM_VERIFY(dom_el != NULL, "Only VectorTensorFiniteElement is supported!");
|
||||
MFEM_VERIFY(ran_el != NULL, "Only VectorTensorFiniteElement is supported!");
|
||||
// only supports H(curl) -> H(div) because of discontinuity requirements
|
||||
MFEM_VERIFY(dom_el->GetDerivType() == FiniteElement::CURL,
|
||||
"Domain space must be H(curl)");
|
||||
MFEM_VERIFY(ran_el->GetDerivType() == FiniteElement::DIV,
|
||||
@@ -1971,9 +2264,7 @@ void CurlInterpolator::AssemblePA(const FiniteElementSpace &dom_fes,
|
||||
|
||||
const int dims = dom_el->GetDim();
|
||||
MFEM_VERIFY(dims == 3, "");
|
||||
dim = mesh->Dimension();
|
||||
|
||||
ne = dom_fes.GetNE();
|
||||
ndof_o = dom_el->GetOrder();
|
||||
int ndof_c = ndof_o + 1;
|
||||
nquad_o = ran_el->GetOrder();
|
||||
@@ -2052,14 +2343,58 @@ CurlInterpolator::CurlInterpolator() { static Kernels kernels{}; }
|
||||
|
||||
void CurlInterpolator::AddMultPA(const Vector &x, Vector &y) const
|
||||
{
|
||||
ApplyPAKernels::Run(dim, ndof_o, nquad_o, ne, ndof_o, nquad_o, pa_data, x,
|
||||
y);
|
||||
if (dim == 2)
|
||||
{
|
||||
MFEM_VERIFY(maps_C_C != nullptr && maps_O_C != nullptr,
|
||||
"2D CurlInterpolator PA data is not assembled.");
|
||||
if (pa_mode_2d == 1)
|
||||
{
|
||||
MFEM_VERIFY(maps_O_O != nullptr,
|
||||
"2D CurlInterpolator scalar curl map is not assembled.");
|
||||
PAHcurlApplyCurl2D(c_dofs1D, o_dofs1D, ne, maps_O_O->B, maps_O_C->G,
|
||||
x, y);
|
||||
}
|
||||
else if (pa_mode_2d == 2)
|
||||
{
|
||||
PAHdivApplyCurl2D(c_dofs1D, o_dofs1D, ne, maps_C_C->B, maps_O_C->G,
|
||||
x, y);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unsupported 2D CurlInterpolator mode.");
|
||||
}
|
||||
return;
|
||||
}
|
||||
|
||||
ApplyPAKernels::Run(dim, ndof_o, nquad_o, ne, ndof_o, nquad_o, pa_data, x, y);
|
||||
}
|
||||
|
||||
void CurlInterpolator::AddMultTransposePA(const Vector &x, Vector &y) const
|
||||
{
|
||||
ApplyTPAKernels::Run(dim, ndof_o, nquad_o, ne, ndof_o, nquad_o, pa_data, x,
|
||||
y);
|
||||
if (dim == 2)
|
||||
{
|
||||
MFEM_VERIFY(maps_C_C != nullptr && maps_O_C != nullptr,
|
||||
"2D CurlInterpolator PA data is not assembled.");
|
||||
if (pa_mode_2d == 1)
|
||||
{
|
||||
MFEM_VERIFY(maps_O_O != nullptr,
|
||||
"2D CurlInterpolator scalar curl map is not assembled.");
|
||||
PAHcurlApplyCurlTranspose2D(c_dofs1D, o_dofs1D, ne, maps_O_O->B,
|
||||
maps_O_C->G, x, y);
|
||||
}
|
||||
else if (pa_mode_2d == 2)
|
||||
{
|
||||
PAHdivApplyCurlTranspose2D(c_dofs1D, o_dofs1D, ne, maps_C_C->B,
|
||||
maps_O_C->G, x, y);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unsupported 2D CurlInterpolator mode.");
|
||||
}
|
||||
return;
|
||||
}
|
||||
|
||||
ApplyTPAKernels::Run(dim, ndof_o, nquad_o, ne, ndof_o, nquad_o, pa_data, x, y);
|
||||
}
|
||||
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
|
||||
@@ -12,6 +12,7 @@
|
||||
#include "../bilininteg.hpp"
|
||||
#include "../gridfunc.hpp"
|
||||
#include "../qfunction.hpp"
|
||||
#include "bilininteg_hdiv_kernels.hpp"
|
||||
#include "bilininteg_hcurl_kernels.hpp"
|
||||
#include "bilininteg_hcurlhdiv_kernels.hpp"
|
||||
|
||||
@@ -21,6 +22,29 @@ namespace mfem
|
||||
namespace
|
||||
{
|
||||
|
||||
class Rotated2DVectorCoefficient : public VectorCoefficient
|
||||
{
|
||||
public:
|
||||
explicit Rotated2DVectorCoefficient(VectorCoefficient &coeff)
|
||||
: VectorCoefficient(2), coeff_(&coeff), value_(2) { }
|
||||
|
||||
void SetTime(real_t t) override { coeff_->SetTime(t); }
|
||||
|
||||
using VectorCoefficient::Eval;
|
||||
void Eval(Vector &V, ElementTransformation &T,
|
||||
const IntegrationPoint &ip) override
|
||||
{
|
||||
coeff_->Eval(value_, T, ip);
|
||||
V.SetSize(2);
|
||||
V(0) = -value_(1);
|
||||
V(1) = value_(0);
|
||||
}
|
||||
|
||||
private:
|
||||
VectorCoefficient *coeff_;
|
||||
mutable Vector value_;
|
||||
};
|
||||
|
||||
void PAHcurlDotSetup2D(const int q1d,
|
||||
const int ne,
|
||||
const bool test_map_integral,
|
||||
@@ -305,6 +329,232 @@ void PAHcurlDotApplyTranspose2D(const int d1d,
|
||||
});
|
||||
}
|
||||
|
||||
void PAHdivDotSetup2D(const int q1d,
|
||||
const int ne,
|
||||
const bool test_map_integral,
|
||||
const Array<real_t> &w,
|
||||
const Vector &jacobians,
|
||||
const Vector &coeff,
|
||||
Vector &op)
|
||||
{
|
||||
auto W = Reshape(w.Read(), q1d, q1d);
|
||||
auto J = Reshape(jacobians.Read(), q1d, q1d, 2, 2, ne);
|
||||
auto C = Reshape(coeff.Read(), 2, q1d, q1d, ne);
|
||||
auto O = Reshape(op.Write(), 2, q1d, q1d, ne);
|
||||
|
||||
mfem::forall_2D(ne, q1d, q1d, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, q1d)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, q1d)
|
||||
{
|
||||
const real_t J11 = J(qx, qy, 0, 0, e);
|
||||
const real_t J12 = J(qx, qy, 1, 0, e);
|
||||
const real_t J21 = J(qx, qy, 0, 1, e);
|
||||
const real_t J22 = J(qx, qy, 1, 1, e);
|
||||
const real_t detJ = (J11 * J22) - (J21 * J12);
|
||||
const real_t scale = W(qx, qy) * (test_map_integral ? 1.0 / detJ : 1.0);
|
||||
const real_t Vx = C(0, qx, qy, e);
|
||||
const real_t Vy = C(1, qx, qy, e);
|
||||
|
||||
O(0, qx, qy, e) = scale * (J11 * Vx + J21 * Vy);
|
||||
O(1, qx, qy, e) = scale * (J12 * Vx + J22 * Vy);
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
void PAHdivDotApply2D(const int d1d,
|
||||
const int d1d_test,
|
||||
const int q1d,
|
||||
const int ne,
|
||||
const Array<real_t> &bo,
|
||||
const Array<real_t> &bc,
|
||||
const Array<real_t> &bt,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().HDIV_MAX_D1D, "");
|
||||
MFEM_VERIFY(d1d_test <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().HDIV_MAX_Q1D, "");
|
||||
|
||||
auto Bo = Reshape(bo.Read(), q1d, d1d - 1);
|
||||
auto Bc = Reshape(bc.Read(), q1d, d1d);
|
||||
auto Bt = Reshape(bt.Read(), d1d_test, q1d);
|
||||
auto O = Reshape(pa_data.Read(), 2, q1d, q1d, ne);
|
||||
auto X = Reshape(x.Read(), 2 * (d1d - 1) * d1d, ne);
|
||||
auto Y = Reshape(y.ReadWrite(), d1d_test, d1d_test, ne);
|
||||
|
||||
mfem::forall(ne, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
constexpr int MAX_D1D = DofQuadLimits::MAX_D1D;
|
||||
constexpr int MAX_Q1D = DofQuadLimits::HDIV_MAX_Q1D;
|
||||
|
||||
real_t mass[MAX_Q1D][MAX_Q1D][2];
|
||||
for (int qy = 0; qy < q1d; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < q1d; ++qx)
|
||||
{
|
||||
mass[qy][qx][0] = 0.0;
|
||||
mass[qy][qx][1] = 0.0;
|
||||
}
|
||||
}
|
||||
|
||||
int osc = 0;
|
||||
for (int dy = 0; dy < d1d - 1; ++dy)
|
||||
{
|
||||
real_t mass_x[MAX_Q1D];
|
||||
for (int qx = 0; qx < q1d; ++qx) { mass_x[qx] = 0.0; }
|
||||
for (int dx = 0; dx < d1d; ++dx)
|
||||
{
|
||||
const real_t t = X(dx + (dy * d1d) + osc, e);
|
||||
for (int qx = 0; qx < q1d; ++qx) { mass_x[qx] += t * Bc(qx, dx); }
|
||||
}
|
||||
for (int qy = 0; qy < q1d; ++qy)
|
||||
{
|
||||
const real_t wy = Bo(qy, dy);
|
||||
for (int qx = 0; qx < q1d; ++qx) { mass[qy][qx][0] += mass_x[qx] * wy; }
|
||||
}
|
||||
}
|
||||
|
||||
osc += d1d * (d1d - 1);
|
||||
for (int dy = 0; dy < d1d; ++dy)
|
||||
{
|
||||
real_t mass_x[MAX_Q1D];
|
||||
for (int qx = 0; qx < q1d; ++qx) { mass_x[qx] = 0.0; }
|
||||
for (int dx = 0; dx < d1d - 1; ++dx)
|
||||
{
|
||||
const real_t t = X(dx + (dy * (d1d - 1)) + osc, e);
|
||||
for (int qx = 0; qx < q1d; ++qx) { mass_x[qx] += t * Bo(qx, dx); }
|
||||
}
|
||||
for (int qy = 0; qy < q1d; ++qy)
|
||||
{
|
||||
const real_t wy = Bc(qy, dy);
|
||||
for (int qx = 0; qx < q1d; ++qx) { mass[qy][qx][1] += mass_x[qx] * wy; }
|
||||
}
|
||||
}
|
||||
|
||||
for (int qy = 0; qy < q1d; ++qy)
|
||||
{
|
||||
real_t sol_x[MAX_D1D];
|
||||
for (int dx = 0; dx < d1d_test; ++dx) { sol_x[dx] = 0.0; }
|
||||
for (int qx = 0; qx < q1d; ++qx)
|
||||
{
|
||||
const real_t s = O(0, qx, qy, e) * mass[qy][qx][0]
|
||||
+ O(1, qx, qy, e) * mass[qy][qx][1];
|
||||
for (int dx = 0; dx < d1d_test; ++dx)
|
||||
{
|
||||
sol_x[dx] += s * Bt(dx, qx);
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < d1d_test; ++dy)
|
||||
{
|
||||
const real_t wy = Bt(dy, qy);
|
||||
for (int dx = 0; dx < d1d_test; ++dx)
|
||||
{
|
||||
Y(dx, dy, e) += sol_x[dx] * wy;
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
void PAHdivDotApplyTranspose2D(const int d1d,
|
||||
const int d1d_test,
|
||||
const int q1d,
|
||||
const int ne,
|
||||
const Array<real_t> &bo,
|
||||
const Array<real_t> &bc,
|
||||
const Array<real_t> &b,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().HDIV_MAX_D1D, "");
|
||||
MFEM_VERIFY(d1d_test <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().HDIV_MAX_Q1D, "");
|
||||
|
||||
auto Bo = Reshape(bo.Read(), q1d, d1d - 1);
|
||||
auto Bc = Reshape(bc.Read(), q1d, d1d);
|
||||
auto B = Reshape(b.Read(), q1d, d1d_test);
|
||||
auto O = Reshape(pa_data.Read(), 2, q1d, q1d, ne);
|
||||
auto X = Reshape(x.Read(), d1d_test, d1d_test, ne);
|
||||
auto Y = Reshape(y.ReadWrite(), 2 * (d1d - 1) * d1d, ne);
|
||||
|
||||
mfem::forall(ne, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
constexpr int MAX_Q1D = DofQuadLimits::HDIV_MAX_Q1D;
|
||||
|
||||
real_t mass[MAX_Q1D][MAX_Q1D];
|
||||
for (int qy = 0; qy < q1d; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < q1d; ++qx)
|
||||
{
|
||||
mass[qy][qx] = 0.0;
|
||||
}
|
||||
}
|
||||
|
||||
for (int dy = 0; dy < d1d_test; ++dy)
|
||||
{
|
||||
real_t sol_x[MAX_Q1D];
|
||||
for (int qx = 0; qx < q1d; ++qx) { sol_x[qx] = 0.0; }
|
||||
for (int dx = 0; dx < d1d_test; ++dx)
|
||||
{
|
||||
const real_t t = X(dx, dy, e);
|
||||
for (int qx = 0; qx < q1d; ++qx) { sol_x[qx] += t * B(qx, dx); }
|
||||
}
|
||||
for (int qy = 0; qy < q1d; ++qy)
|
||||
{
|
||||
const real_t wy = B(qy, dy);
|
||||
for (int qx = 0; qx < q1d; ++qx) { mass[qy][qx] += sol_x[qx] * wy; }
|
||||
}
|
||||
}
|
||||
|
||||
int osc = 0;
|
||||
for (int dy = 0; dy < d1d - 1; ++dy)
|
||||
{
|
||||
real_t mass_x[MAX_Q1D];
|
||||
for (int qx = 0; qx < q1d; ++qx) { mass_x[qx] = 0.0; }
|
||||
for (int qy = 0; qy < q1d; ++qy)
|
||||
{
|
||||
const real_t wy = Bo(qy, dy);
|
||||
for (int qx = 0; qx < q1d; ++qx)
|
||||
{
|
||||
mass_x[qx] += (O(0, qx, qy, e) * mass[qy][qx]) * wy;
|
||||
}
|
||||
}
|
||||
for (int dx = 0; dx < d1d; ++dx)
|
||||
{
|
||||
real_t sum = 0.0;
|
||||
for (int qx = 0; qx < q1d; ++qx) { sum += mass_x[qx] * Bc(qx, dx); }
|
||||
Y(dx + (dy * d1d) + osc, e) += sum;
|
||||
}
|
||||
}
|
||||
|
||||
osc += d1d * (d1d - 1);
|
||||
for (int dy = 0; dy < d1d; ++dy)
|
||||
{
|
||||
real_t mass_x[MAX_Q1D];
|
||||
for (int qx = 0; qx < q1d; ++qx) { mass_x[qx] = 0.0; }
|
||||
for (int qy = 0; qy < q1d; ++qy)
|
||||
{
|
||||
const real_t wy = Bc(qy, dy);
|
||||
for (int qx = 0; qx < q1d; ++qx)
|
||||
{
|
||||
mass_x[qx] += (O(1, qx, qy, e) * mass[qy][qx]) * wy;
|
||||
}
|
||||
}
|
||||
for (int dx = 0; dx < d1d - 1; ++dx)
|
||||
{
|
||||
real_t sum = 0.0;
|
||||
for (int qx = 0; qx < q1d; ++qx) { sum += mass_x[qx] * Bo(qx, dx); }
|
||||
Y(dx + (dy * (d1d - 1)) + osc, e) += sum;
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
void PAHcurlDotApply3D(const int d1d,
|
||||
const int d1d_test,
|
||||
const int q1d,
|
||||
@@ -812,6 +1062,8 @@ void MixedScalarCurlIntegrator::AssemblePA(const FiniteElementSpace &trial_fes,
|
||||
= IntRule ? IntRule : &MassIntegrator::GetRule(*eltest, *eltest,
|
||||
*mesh->GetTypicalElementTransformation());
|
||||
|
||||
auto map_type = eltest->GetMapType();
|
||||
|
||||
const int dims = el->GetDim();
|
||||
MFEM_VERIFY(dims == 2, "");
|
||||
|
||||
@@ -843,7 +1095,23 @@ void MixedScalarCurlIntegrator::AssemblePA(const FiniteElementSpace &trial_fes,
|
||||
|
||||
if (dim == 2)
|
||||
{
|
||||
internal::PAHcurlL2Setup2D(quad1D, ne, ir->GetWeights(), coeff, pa_data);
|
||||
switch (map_type)
|
||||
{
|
||||
case FiniteElement::VALUE:
|
||||
internal::PAHcurlL2Setup2D(quad1D, ne, ir->GetWeights(), coeff,
|
||||
pa_data);
|
||||
break;
|
||||
case FiniteElement::INTEGRAL:
|
||||
{
|
||||
const MemoryType mt = (pa_mt == MemoryType::DEFAULT) ?
|
||||
Device::GetDeviceMemoryType() : pa_mt;
|
||||
auto geom = mesh->GetGeometricFactors(*ir, GeometricFactors::DETERMINANTS, mt);
|
||||
internal::PAHcurlL2IntSetup2D(quad1D, ne, ir->GetWeights(), coeff,
|
||||
geom->detJ, pa_data);
|
||||
} break;
|
||||
default:
|
||||
MFEM_ABORT("Unsupported map type");
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
@@ -1194,4 +1462,270 @@ void MixedVectorWeakCurlIntegrator::AddMultTransposePA(const Vector &x,
|
||||
}
|
||||
}
|
||||
|
||||
void MixedScalarWeakGradientIntegrator::AssemblePA(const FiniteElementSpace
|
||||
&trial_fes,
|
||||
const FiniteElementSpace &test_fes)
|
||||
{
|
||||
Mesh *mesh = trial_fes.GetMesh();
|
||||
const FiniteElement *trial_fel = trial_fes.GetTypicalFE();
|
||||
const FiniteElement *test_fel = test_fes.GetTypicalFE();
|
||||
|
||||
const TensorBasisElement *trial_tensor_el =
|
||||
dynamic_cast<const TensorBasisElement*>(trial_fel);
|
||||
MFEM_VERIFY(trial_tensor_el != NULL,
|
||||
"Only tensor-product scalar trial elements are supported!");
|
||||
|
||||
const VectorTensorFiniteElement *test_el =
|
||||
dynamic_cast<const VectorTensorFiniteElement*>(test_fel);
|
||||
MFEM_VERIFY(test_el != NULL, "Only VectorTensorFiniteElement is supported!");
|
||||
MFEM_VERIFY(test_el->GetDerivType() == mfem::FiniteElement::DIV,
|
||||
"Only H(div) test spaces are supported!");
|
||||
|
||||
const IntegrationRule *ir = IntRule ? IntRule : &MassIntegrator::GetRule(
|
||||
*test_el, *test_el,
|
||||
*mesh->GetTypicalElementTransformation());
|
||||
|
||||
const int dims = test_el->GetDim();
|
||||
MFEM_VERIFY(dims == 2 || dims == 3, "");
|
||||
|
||||
const int nq = ir->GetNPoints();
|
||||
dim = mesh->Dimension();
|
||||
MFEM_VERIFY(dim == 2 || dim == 3, "");
|
||||
|
||||
ne = trial_fes.GetNE();
|
||||
MFEM_VERIFY(ne == test_fes.GetNE(),
|
||||
"Different meshes for test and trial spaces");
|
||||
|
||||
mapsC = &test_el->GetDofToQuad(*ir, DofToQuad::TENSOR);
|
||||
mapsO = &test_el->GetDofToQuadOpen(*ir, DofToQuad::TENSOR);
|
||||
dofs1D = mapsC->ndof;
|
||||
quad1D = mapsC->nqpt;
|
||||
|
||||
L2mapsO = &trial_fel->GetDofToQuad(*ir, DofToQuad::TENSOR);
|
||||
L2dofs1D = L2mapsO->ndof;
|
||||
|
||||
MFEM_VERIFY(dofs1D == mapsO->ndof + 1 && quad1D == mapsO->nqpt, "");
|
||||
if (dim == 2) { MFEM_VERIFY(nq == quad1D * quad1D, ""); }
|
||||
else { MFEM_VERIFY(nq == quad1D * quad1D * quad1D, ""); }
|
||||
|
||||
pa_data.SetSize(nq * ne, Device::GetMemoryType());
|
||||
|
||||
QuadratureSpace qs(*mesh, *ir);
|
||||
CoefficientVector coeff(Q, qs, CoefficientStorage::FULL);
|
||||
|
||||
if (trial_fel->GetMapType() == FiniteElement::INTEGRAL)
|
||||
{
|
||||
const GeometricFactors *geom =
|
||||
mesh->GetGeometricFactors(*ir, GeometricFactors::DETERMINANTS);
|
||||
coeff /= geom->detJ;
|
||||
}
|
||||
|
||||
if (dim == 2)
|
||||
{
|
||||
internal::PAHdivL2Setup2D(quad1D, ne, ir->GetWeights(), coeff, pa_data);
|
||||
}
|
||||
else
|
||||
{
|
||||
internal::PAHdivL2Setup3D(quad1D, ne, ir->GetWeights(), coeff, pa_data);
|
||||
}
|
||||
}
|
||||
|
||||
void MixedScalarWeakGradientIntegrator::AddMultPA(const Vector &x,
|
||||
Vector &y) const
|
||||
{
|
||||
if (dim == 2)
|
||||
{
|
||||
internal::PAHdivL2ApplyTranspose2D(dofs1D, quad1D, L2dofs1D, ne, L2mapsO->B,
|
||||
mapsC->Gt, mapsO->Bt, pa_data, x, y);
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
internal::PAHdivL2ApplyTranspose3D(dofs1D, quad1D, L2dofs1D, ne, L2mapsO->B,
|
||||
mapsC->Gt, mapsO->Bt, pa_data, x, y);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unsupported dimension!");
|
||||
}
|
||||
}
|
||||
|
||||
void MixedScalarWeakGradientIntegrator::AddMultTransposePA(const Vector &x,
|
||||
Vector &y) const
|
||||
{
|
||||
if (dim == 2)
|
||||
{
|
||||
internal::PAHdivL2Apply2D(dofs1D, quad1D, L2dofs1D, ne, mapsO->B, mapsC->G,
|
||||
L2mapsO->Bt, pa_data, x, y);
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
internal::PAHdivL2Apply3D(dofs1D, quad1D, L2dofs1D, ne, mapsO->B, mapsC->G,
|
||||
L2mapsO->Bt, pa_data, x, y);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unsupported dimension!");
|
||||
}
|
||||
}
|
||||
|
||||
void MixedScalarCrossProductIntegrator::AssemblePA(const FiniteElementSpace
|
||||
&trial_fes,
|
||||
const FiniteElementSpace &test_fes)
|
||||
{
|
||||
Mesh *mesh = trial_fes.GetMesh();
|
||||
const FiniteElement *trial_fel = trial_fes.GetTypicalFE();
|
||||
const FiniteElement *test_fel = test_fes.GetTypicalFE();
|
||||
|
||||
const VectorTensorFiniteElement *trial_el =
|
||||
dynamic_cast<const VectorTensorFiniteElement *>(trial_fel);
|
||||
MFEM_VERIFY(trial_el != NULL, "Only VectorTensorFiniteElement is supported!");
|
||||
MFEM_VERIFY(trial_el->GetDerivType() == mfem::FiniteElement::DIV,
|
||||
"Only H(div) trial spaces are supported!");
|
||||
|
||||
const TensorBasisElement *test_tensor_el =
|
||||
dynamic_cast<const TensorBasisElement*>(test_fel);
|
||||
MFEM_VERIFY(test_tensor_el != NULL,
|
||||
"Only tensor-product scalar test elements are supported!");
|
||||
|
||||
const IntegrationRule *ir = IntRule;
|
||||
if (ir == nullptr)
|
||||
{
|
||||
const int order = trial_fel->GetOrder() + test_fel->GetOrder()
|
||||
+ mesh->GetTypicalElementTransformation()->OrderW();
|
||||
ir = &IntRules.Get(trial_fel->GetGeomType(), order);
|
||||
}
|
||||
|
||||
dim = mesh->Dimension();
|
||||
MFEM_VERIFY(dim == 2, "Only 2D is supported.");
|
||||
MFEM_VERIFY(trial_el->GetDim() == dim && test_fel->GetDim() == dim,
|
||||
"Trial/test dimension mismatch.");
|
||||
|
||||
ne = trial_fes.GetNE();
|
||||
MFEM_VERIFY(ne == test_fes.GetNE(),
|
||||
"Different meshes for test and trial spaces");
|
||||
|
||||
geom = mesh->GetGeometricFactors(*ir, GeometricFactors::JACOBIANS);
|
||||
mapsC = &trial_el->GetDofToQuad(*ir, DofToQuad::TENSOR);
|
||||
mapsO = &trial_el->GetDofToQuadOpen(*ir, DofToQuad::TENSOR);
|
||||
mapsTest = &test_fel->GetDofToQuad(*ir, DofToQuad::TENSOR);
|
||||
|
||||
dofs1D = mapsC->ndof;
|
||||
dofs1Dtest = mapsTest->ndof;
|
||||
quad1D = mapsC->nqpt;
|
||||
test_map_integral = (test_fel->GetMapType() == FiniteElement::INTEGRAL);
|
||||
|
||||
MFEM_VERIFY(dofs1D == mapsO->ndof + 1 && quad1D == mapsO->nqpt, "");
|
||||
MFEM_VERIFY(quad1D == mapsTest->nqpt, "Trial/test quadrature mismatch");
|
||||
MFEM_VERIFY(dofs1D <= DeviceDofQuadLimits::Get().HDIV_MAX_D1D, "");
|
||||
MFEM_VERIFY(dofs1Dtest <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(quad1D <= DeviceDofQuadLimits::Get().HDIV_MAX_Q1D, "");
|
||||
|
||||
const int nq = ir->GetNPoints();
|
||||
MFEM_VERIFY(nq == quad1D * quad1D, "");
|
||||
|
||||
Rotated2DVectorCoefficient rotated(*VQ);
|
||||
QuadratureSpace qs(*mesh, *ir);
|
||||
CoefficientVector coeff(rotated, qs, CoefficientStorage::FULL);
|
||||
|
||||
pa_data.SetSize(dim * nq * ne, Device::GetMemoryType());
|
||||
PAHdivDotSetup2D(quad1D, ne, test_map_integral, ir->GetWeights(),
|
||||
geom->J, coeff, pa_data);
|
||||
}
|
||||
|
||||
void MixedScalarCrossProductIntegrator::AddMultPA(const Vector &x,
|
||||
Vector &y) const
|
||||
{
|
||||
PAHdivDotApply2D(dofs1D, dofs1Dtest, quad1D, ne,
|
||||
mapsO->B, mapsC->B, mapsTest->Bt,
|
||||
pa_data, x, y);
|
||||
}
|
||||
|
||||
void MixedScalarCrossProductIntegrator::AddMultTransposePA(const Vector &x,
|
||||
Vector &y) const
|
||||
{
|
||||
PAHdivDotApplyTranspose2D(dofs1D, dofs1Dtest, quad1D, ne,
|
||||
mapsO->B, mapsC->B, mapsTest->B,
|
||||
pa_data, x, y);
|
||||
}
|
||||
|
||||
void MixedScalarWeakCrossProductIntegrator::AssemblePA(
|
||||
const FiniteElementSpace &trial_fes,
|
||||
const FiniteElementSpace &test_fes)
|
||||
{
|
||||
Mesh *mesh = trial_fes.GetMesh();
|
||||
const FiniteElement *trial_fel = trial_fes.GetTypicalFE();
|
||||
const FiniteElement *test_fel = test_fes.GetTypicalFE();
|
||||
|
||||
const TensorBasisElement *trial_tensor_el =
|
||||
dynamic_cast<const TensorBasisElement*>(trial_fel);
|
||||
MFEM_VERIFY(trial_tensor_el != NULL,
|
||||
"Only tensor-product scalar trial elements are supported!");
|
||||
|
||||
const VectorTensorFiniteElement *test_el =
|
||||
dynamic_cast<const VectorTensorFiniteElement*>(test_fel);
|
||||
MFEM_VERIFY(test_el != NULL, "Only VectorTensorFiniteElement is supported!");
|
||||
MFEM_VERIFY(test_el->GetDerivType() == mfem::FiniteElement::CURL,
|
||||
"Only H(curl) test spaces are supported!");
|
||||
|
||||
const IntegrationRule *ir = IntRule;
|
||||
if (ir == nullptr)
|
||||
{
|
||||
const int order = trial_fel->GetOrder() + test_fel->GetOrder()
|
||||
+ mesh->GetTypicalElementTransformation()->OrderW();
|
||||
ir = &IntRules.Get(trial_fel->GetGeomType(), order);
|
||||
}
|
||||
|
||||
dim = mesh->Dimension();
|
||||
MFEM_VERIFY(dim == 2, "Only 2D is supported.");
|
||||
MFEM_VERIFY(test_el->GetDim() == dim && trial_fel->GetDim() == dim,
|
||||
"Trial/test dimension mismatch.");
|
||||
|
||||
ne = trial_fes.GetNE();
|
||||
MFEM_VERIFY(ne == test_fes.GetNE(),
|
||||
"Different meshes for test and trial spaces");
|
||||
|
||||
geom = mesh->GetGeometricFactors(*ir, GeometricFactors::JACOBIANS);
|
||||
mapsC = &test_el->GetDofToQuad(*ir, DofToQuad::TENSOR);
|
||||
mapsO = &test_el->GetDofToQuadOpen(*ir, DofToQuad::TENSOR);
|
||||
mapsTrial = &trial_fel->GetDofToQuad(*ir, DofToQuad::TENSOR);
|
||||
|
||||
dofs1D = mapsC->ndof;
|
||||
dofs1Dtrial = mapsTrial->ndof;
|
||||
quad1D = mapsC->nqpt;
|
||||
trial_map_integral = (trial_fel->GetMapType() == FiniteElement::INTEGRAL);
|
||||
|
||||
MFEM_VERIFY(dofs1D == mapsO->ndof + 1 && quad1D == mapsO->nqpt, "");
|
||||
MFEM_VERIFY(quad1D == mapsTrial->nqpt, "Trial/test quadrature mismatch");
|
||||
MFEM_VERIFY(dofs1D <= DeviceDofQuadLimits::Get().HCURL_MAX_D1D, "");
|
||||
MFEM_VERIFY(dofs1Dtrial <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(quad1D <= DeviceDofQuadLimits::Get().HCURL_MAX_Q1D, "");
|
||||
|
||||
const int nq = ir->GetNPoints();
|
||||
MFEM_VERIFY(nq == quad1D * quad1D, "");
|
||||
|
||||
Rotated2DVectorCoefficient rotated(*VQ);
|
||||
QuadratureSpace qs(*mesh, *ir);
|
||||
CoefficientVector coeff(rotated, qs, CoefficientStorage::FULL);
|
||||
|
||||
pa_data.SetSize(dim * nq * ne, Device::GetMemoryType());
|
||||
PAHcurlDotSetup2D(quad1D, ne, trial_map_integral, ir->GetWeights(),
|
||||
geom->J, coeff, pa_data);
|
||||
}
|
||||
|
||||
void MixedScalarWeakCrossProductIntegrator::AddMultPA(const Vector &x,
|
||||
Vector &y) const
|
||||
{
|
||||
PAHcurlDotApplyTranspose2D(dofs1D, dofs1Dtrial, quad1D, ne,
|
||||
mapsO->B, mapsC->B, mapsTrial->B,
|
||||
pa_data, x, y);
|
||||
}
|
||||
|
||||
void MixedScalarWeakCrossProductIntegrator::AddMultTransposePA(const Vector &x,
|
||||
Vector &y) const
|
||||
{
|
||||
PAHcurlDotApply2D(dofs1D, dofs1Dtrial, quad1D, ne,
|
||||
mapsO->B, mapsC->B, mapsTrial->Bt,
|
||||
pa_data, x, y);
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
|
||||
@@ -672,6 +672,8 @@ void MixedVectorGradientIntegrator::AssemblePA(const FiniteElementSpace
|
||||
const NodalTensorFiniteElement *trial_el =
|
||||
dynamic_cast<const NodalTensorFiniteElement*>(trial_fel);
|
||||
MFEM_VERIFY(trial_el != NULL, "Only NodalTensorFiniteElement is supported!");
|
||||
MFEM_VERIFY(trial_el->GetMapType() == FiniteElement::VALUE,
|
||||
"Only value map type is supported!");
|
||||
|
||||
const VectorTensorFiniteElement *test_el =
|
||||
dynamic_cast<const VectorTensorFiniteElement*>(test_fel);
|
||||
|
||||
+163
-982
File diff suppressed because it is too large
Load Diff
@@ -0,0 +1,365 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
#pragma once
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
#include "../../general/array.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/dtensor.hpp"
|
||||
#include "../../linalg/vector.hpp"
|
||||
#include "../bilininteg.hpp"
|
||||
#include "../kernels.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
|
||||
namespace internal
|
||||
{
|
||||
|
||||
// Shared memory PA Divergence Apply 2D kernel
|
||||
template<int T_TR_D1D = 0, int T_TE_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPADivergenceApply2D(const int NE,
|
||||
const Array<real_t> &b_,
|
||||
const Array<real_t> &g_,
|
||||
const Array<real_t> &bt_,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(TR_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(TE_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
|
||||
const auto B = b_.Read(), G = g_.Read(), Bt = bt_.Read();
|
||||
const auto Q = Reshape(q_.Read(), Q1D, Q1D, 2, 2, NE);
|
||||
const auto X = Reshape(x_.Read(), TR_D1D, TR_D1D, 2, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), TE_D1D, TE_D1D, 1, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MQ1][MQ1], sG[MQ1][MQ1];
|
||||
|
||||
kernels::internal::vd_regs2d_t<2, 2, MQ1> g0, g1;
|
||||
kernels::internal::v_regs2d_t<1, MQ1> r0, r1;
|
||||
|
||||
kernels::internal::LoadMatrix(TR_D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadMatrix(TR_D1D, Q1D, G, sG);
|
||||
|
||||
kernels::internal::LoadDofs2d(e, TR_D1D, X, g0);
|
||||
kernels::internal::Grad2d(TR_D1D, Q1D, smem, sB, sG, g0, g1);
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
r0[0][qy][qx] =
|
||||
g1[0][0][qy][qx] * Q(qx, qy, 0, 0, e) +
|
||||
g1[0][1][qy][qx] * Q(qx, qy, 1, 0, e) +
|
||||
g1[1][0][qy][qx] * Q(qx, qy, 0, 1, e) +
|
||||
g1[1][1][qy][qx] * Q(qx, qy, 1, 1, e);
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
kernels::internal::LoadMatrix<MQ1,true>(TE_D1D, Q1D, Bt, sB);
|
||||
kernels::internal::EvalTranspose2d(TE_D1D, Q1D, smem, sB, r0, r1);
|
||||
kernels::internal::WriteDofs2d(e, TE_D1D, r1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
// Shared memory PA Divergence Apply 2D kernel transpose
|
||||
template<int T_TR_D1D = 0, int T_TE_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPADivergenceApplyTranspose2D(const int NE,
|
||||
const Array<real_t> &bt,
|
||||
const Array<real_t> >,
|
||||
const Array<real_t> &b,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(TR_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(TE_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
|
||||
const auto Bt = bt.Read(), Gt = gt.Read(), B = b.Read();
|
||||
const auto Q = Reshape(q_.Read(), Q1D, Q1D, 2, 2, NE);
|
||||
const auto X = Reshape(x_.Read(), TE_D1D, TE_D1D, 1, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), TR_D1D, TR_D1D, 2, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MQ1][MQ1], sG[MQ1][MQ1];
|
||||
|
||||
kernels::internal::v_regs2d_t<1, MQ1> r0, r1;
|
||||
kernels::internal::vd_regs2d_t<2, 2, MQ1> g0, g1;
|
||||
|
||||
kernels::internal::LoadMatrix(TE_D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadDofs2d(e, TE_D1D, X, r0);
|
||||
kernels::internal::Eval2d(TE_D1D, Q1D, smem, sB, r0, r1);
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
g0[0][0][qy][qx] = r1[0][qy][qx] * Q(qx, qy, 0, 0, e);
|
||||
g0[0][1][qy][qx] = r1[0][qy][qx] * Q(qx, qy, 1, 0, e);
|
||||
g0[1][0][qy][qx] = r1[0][qy][qx] * Q(qx, qy, 0, 1, e);
|
||||
g0[1][1][qy][qx] = r1[0][qy][qx] * Q(qx, qy, 1, 1, e);
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
kernels::internal::LoadMatrix<MQ1,true>(TR_D1D, Q1D, Bt, sB);
|
||||
kernels::internal::LoadMatrix<MQ1,true>(TR_D1D, Q1D, Gt, sG);
|
||||
kernels::internal::GradTranspose2d(TR_D1D, Q1D, smem, sB, sG, g0, g1);
|
||||
kernels::internal::WriteDofs2d(e, TR_D1D, g1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
// Shared memory PA Divergence Apply 3D kernel transpose
|
||||
template<int T_TR_D1D = 0, int T_TE_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPADivergenceApplyTranspose3D(const int NE,
|
||||
const Array<real_t> &bt,
|
||||
const Array<real_t> >,
|
||||
const Array<real_t> &b,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
int tr_d1d = 0,
|
||||
int te_d1d = 0,
|
||||
int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(TR_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(TE_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
|
||||
const auto Bt = bt.Read(), Gt = gt.Read(), B = b.Read();
|
||||
const auto Q = Reshape(q_.Read(), Q1D, Q1D, Q1D, 3, 3, NE);
|
||||
const auto X = Reshape(x_.Read(), TE_D1D, TE_D1D, TE_D1D, 1, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), TR_D1D, TR_D1D, TR_D1D, 3, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MQ1][MQ1], sG[MQ1][MQ1];
|
||||
|
||||
kernels::internal::v_regs3d_t<1, MQ1> r0, r1;
|
||||
kernels::internal::vd_regs3d_t<3, 3, MQ1> g0, g1;
|
||||
|
||||
kernels::internal::LoadMatrix(TE_D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadDofs3d(e, TE_D1D, X, r0);
|
||||
kernels::internal::Eval3d(TE_D1D, Q1D, smem, sB, r0, r1);
|
||||
|
||||
for (int qz = 0; qz < Q1D; qz++)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
const auto r = r1[0][qz][qy][qx];
|
||||
g0[0][0][qz][qy][qx] = r * Q(qx, qy, qz, 0, 0, e);
|
||||
g0[0][1][qz][qy][qx] = r * Q(qx, qy, qz, 1, 0, e);
|
||||
g0[0][2][qz][qy][qx] = r * Q(qx, qy, qz, 2, 0, e);
|
||||
|
||||
g0[1][0][qz][qy][qx] = r * Q(qx, qy, qz, 0, 1, e);
|
||||
g0[1][1][qz][qy][qx] = r * Q(qx, qy, qz, 1, 1, e);
|
||||
g0[1][2][qz][qy][qx] = r * Q(qx, qy, qz, 2, 1, e);
|
||||
|
||||
g0[2][0][qz][qy][qx] = r * Q(qx, qy, qz, 0, 2, e);
|
||||
g0[2][1][qz][qy][qx] = r * Q(qx, qy, qz, 1, 2, e);
|
||||
g0[2][2][qz][qy][qx] = r * Q(qx, qy, qz, 2, 2, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
kernels::internal::LoadMatrix<MQ1,true>(TR_D1D, Q1D, Bt, sB);
|
||||
kernels::internal::LoadMatrix<MQ1,true>(TR_D1D, Q1D, Gt, sG);
|
||||
kernels::internal::GradTranspose3d(TR_D1D, Q1D, smem, sB, sG, g0, g1);
|
||||
kernels::internal::WriteDofs3d(e, TR_D1D, g1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
// Shared memory PA Divergence Apply 3D kernel
|
||||
template<int T_TR_D1D = 0, int T_TE_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPADivergenceApply3D(const int NE,
|
||||
const Array<real_t> &b_,
|
||||
const Array<real_t> &g_,
|
||||
const Array<real_t> &bt_,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(TR_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(TE_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
|
||||
const auto B = b_.Read(), G = g_.Read(), Bt = bt_.Read();
|
||||
const auto Q = Reshape(q_.Read(), Q1D, Q1D, Q1D, 3,3, NE);
|
||||
const auto X = Reshape(x_.Read(), TR_D1D, TR_D1D, TR_D1D, 3, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), TE_D1D, TE_D1D, TE_D1D, 1, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D*T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MQ1][MQ1], sG[MQ1][MQ1];
|
||||
|
||||
kernels::internal::vd_regs3d_t<3, 3, MQ1> g0, g1;
|
||||
kernels::internal::v_regs3d_t<1, MQ1> r0, r1;
|
||||
|
||||
kernels::internal::LoadMatrix(TR_D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadMatrix(TR_D1D, Q1D, G, sG);
|
||||
|
||||
kernels::internal::LoadDofs3d(e, TR_D1D, X, g0);
|
||||
kernels::internal::Grad3d(TR_D1D, Q1D, smem, sB, sG, g0, g1);
|
||||
|
||||
for (int qz = 0; qz < Q1D; qz++)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
r0[0][qz][qy][qx] =
|
||||
// c = 0
|
||||
g1[0][0][qz][qy][qx] * Q(qx, qy, qz, 0, 0, e) +
|
||||
g1[0][1][qz][qy][qx] * Q(qx, qy, qz, 1, 0, e) +
|
||||
g1[0][2][qz][qy][qx] * Q(qx, qy, qz, 2, 0, e) +
|
||||
// c = 1
|
||||
g1[1][0][qz][qy][qx] * Q(qx, qy, qz, 0, 1, e) +
|
||||
g1[1][1][qz][qy][qx] * Q(qx, qy, qz, 1, 1, e) +
|
||||
g1[1][2][qz][qy][qx] * Q(qx, qy, qz, 2, 1, e) +
|
||||
// c = 2
|
||||
g1[2][0][qz][qy][qx] * Q(qx, qy, qz, 0, 2, e) +
|
||||
g1[2][1][qz][qy][qx] * Q(qx, qy, qz, 1, 2, e) +
|
||||
g1[2][2][qz][qy][qx] * Q(qx, qy, qz, 2, 2, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
kernels::internal::LoadMatrix<MQ1, true>(TE_D1D, Q1D, Bt, sB);
|
||||
kernels::internal::EvalTranspose3d(TE_D1D, Q1D, smem, sB, r0, r1);
|
||||
kernels::internal::WriteDofs3d(e, TE_D1D, r1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
} // namespace internal
|
||||
|
||||
template<int DIM, int T_TR_D1D, int T_TE_D1D, int T_Q1D>
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultPAType
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultPA::Kernel()
|
||||
{
|
||||
static_assert(T_TR_D1D <= T_Q1D && T_TE_D1D <= T_Q1D);
|
||||
if constexpr (DIM == 2)
|
||||
{
|
||||
return internal::SmemPADivergenceApply2D<T_TR_D1D, T_TE_D1D, T_Q1D>;
|
||||
}
|
||||
else if constexpr (DIM == 3)
|
||||
{
|
||||
return internal::SmemPADivergenceApply3D<T_TR_D1D, T_TE_D1D, T_Q1D>;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
inline VectorDivergenceIntegrator::VectorDivergenceAddMultPAType
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultPA::Fallback
|
||||
(int dim, int tr_d1d, int te_d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(tr_d1d <= q1d && te_d1d <= q1d, "");
|
||||
MFEM_VERIFY(tr_d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(te_d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
if (dim == 2)
|
||||
{
|
||||
return internal::SmemPADivergenceApply2D;
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
return internal::SmemPADivergenceApply3D;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
template<int DIM, int T_TR_D1D, int T_TE_D1D, int T_Q1D>
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultTransposePAType
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultTransposePA::Kernel()
|
||||
{
|
||||
static_assert(T_TR_D1D <= T_Q1D && T_TE_D1D <= T_Q1D);
|
||||
if constexpr (DIM == 2)
|
||||
{
|
||||
return internal::SmemPADivergenceApplyTranspose2D<T_TR_D1D, T_TE_D1D, T_Q1D>;
|
||||
}
|
||||
else if constexpr (DIM == 3)
|
||||
{
|
||||
return internal::SmemPADivergenceApplyTranspose3D<T_TR_D1D, T_TE_D1D, T_Q1D>;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
inline VectorDivergenceIntegrator::VectorDivergenceAddMultTransposePAType
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultTransposePA::Fallback
|
||||
(int dim, int tr_d1d, int te_d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(tr_d1d <= q1d && te_d1d <= q1d, "");
|
||||
MFEM_VERIFY(tr_d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(te_d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
if (dim == 2)
|
||||
{
|
||||
return internal::SmemPADivergenceApplyTranspose2D;
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
return internal::SmemPADivergenceApplyTranspose3D;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
} // namespace mfem
|
||||
@@ -22,6 +22,8 @@ void VectorMassIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
{
|
||||
Mesh *mesh = fes.GetMesh();
|
||||
const FiniteElement &el = *fes.GetTypicalFE();
|
||||
MFEM_VERIFY(el.GetMapType() == FiniteElement::VALUE,
|
||||
"Only value map type supported");
|
||||
ElementTransformation &Trans = *mesh->GetTypicalElementTransformation();
|
||||
const auto *ir = IntRule ? IntRule : &MassIntegrator::GetRule(el, el, Trans);
|
||||
|
||||
@@ -205,157 +207,40 @@ void VectorMassIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
|
||||
}
|
||||
|
||||
template <const int T_D1D = 0, const int T_Q1D = 0>
|
||||
static void PAVectorMassAssembleDiagonal2D(const int NE,
|
||||
const Array<real_t> &b,
|
||||
const Vector &pa_data, Vector &diag,
|
||||
const int d1d = 0, const int q1d = 0)
|
||||
{
|
||||
constexpr int VDIM = 2;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
MFEM_VERIFY(D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
const auto B = Reshape(b.Read(), Q1D, D1D);
|
||||
const auto D = Reshape(pa_data.Read(), Q1D, Q1D, NE);
|
||||
auto Y = Reshape(diag.ReadWrite(), D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int max_D1D = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int max_Q1D = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
real_t temp[max_Q1D][max_D1D];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
temp[qx][dy] = 0.0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
temp[qx][dy] += B(qy, dy) * B(qy, dy) * D(qx, qy, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
real_t temp1 = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
temp1 += B(qx, dx) * B(qx, dx) * temp[qx][dy];
|
||||
}
|
||||
Y(dx, dy, 0, e) = temp1;
|
||||
Y(dx, dy, 1, e) = temp1;
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
template <const int T_D1D = 0, const int T_Q1D = 0>
|
||||
static void PAVectorMassAssembleDiagonal3D(const int NE,
|
||||
const Array<real_t> &B_,
|
||||
const Vector &pa_data, Vector &diag,
|
||||
const int d1d = 0, const int q1d = 0)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
MFEM_VERIFY(D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
const auto B = Reshape(B_.Read(), Q1D, D1D);
|
||||
MFEM_VERIFY(pa_data.Size() == Q1D * Q1D * Q1D * NE, "pa_data size error");
|
||||
const auto D = Reshape(pa_data.Read(), Q1D, Q1D, Q1D, NE);
|
||||
auto Y = Reshape(diag.ReadWrite(), D1D, D1D, D1D, VDIM, NE);
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
// the following variables are evaluated at compile time
|
||||
constexpr int max_D1D = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int max_Q1D = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
real_t temp[max_Q1D][max_Q1D][max_D1D];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
temp[qx][qy][dz] = 0.0;
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
temp[qx][qy][dz] +=
|
||||
B(qz, dz) * B(qz, dz) * D(qx, qy, qz, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
real_t temp2[max_Q1D][max_D1D][max_D1D];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
temp2[qx][dy][dz] = 0.0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
temp2[qx][dy][dz] +=
|
||||
B(qy, dy) * B(qy, dy) * temp[qx][qy][dz];
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
real_t temp3 = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
temp3 += B(qx, dx) * B(qx, dx) * temp2[qx][dy][dz];
|
||||
}
|
||||
Y(dx, dy, dz, 0, e) = temp3;
|
||||
Y(dx, dy, dz, 1, e) = temp3;
|
||||
Y(dx, dy, dz, 2, e) = temp3;
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
static void PAVectorMassAssembleDiagonal(const int dim, const int D1D,
|
||||
const int Q1D, const int NE,
|
||||
const Array<real_t> &B,
|
||||
const Vector &pa_data,
|
||||
Vector &diag)
|
||||
{
|
||||
if (dim == 2)
|
||||
{
|
||||
return PAVectorMassAssembleDiagonal2D(NE, B, pa_data, diag, D1D, Q1D);
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
return PAVectorMassAssembleDiagonal3D(NE, B, pa_data, diag, D1D, Q1D);
|
||||
}
|
||||
MFEM_ABORT("Dimension not implemented.");
|
||||
}
|
||||
|
||||
void VectorMassIntegrator::AssembleDiagonalPA(Vector &diag)
|
||||
{
|
||||
if (DeviceCanUseCeed()) { ceedOp->GetDiagonal(diag); }
|
||||
else
|
||||
{
|
||||
MFEM_VERIFY(coeff_vdim == 1, "coeff_vdim != 1");
|
||||
MFEM_VERIFY(!VQ && !MQ, "VQ and MQ not supported");
|
||||
PAVectorMassAssembleDiagonal(dim, dofs1D, quad1D, ne, maps->B, pa_data, diag);
|
||||
}
|
||||
if (DeviceCanUseCeed()) { return ceedOp->GetDiagonal(diag); }
|
||||
|
||||
MFEM_VERIFY(coeff_vdim == 1, "coeff_vdim != 1");
|
||||
MFEM_VERIFY(!VQ && !MQ, "VQ and MQ not supported");
|
||||
|
||||
// Add the VectorMassAssembleDiagonalPA specializations
|
||||
static const auto vector_mass_assemble_diagonal_kernel_specializations =
|
||||
( // 2D
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 2>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 3>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 4>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 5>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 6>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 7>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 8>::Add(),
|
||||
// 3D
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 2>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 3>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 4>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 5>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 6>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 7>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 8>::Add(),
|
||||
true);
|
||||
MFEM_CONTRACT_VAR(vector_mass_assemble_diagonal_kernel_specializations);
|
||||
|
||||
VectorMassAssembleDiagonalPA::Run(dim, quad1D, // templated arguments
|
||||
ne, dofs1D, quad1D,
|
||||
maps->B.Read(),
|
||||
pa_data.Read(),
|
||||
diag.ReadWrite());
|
||||
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
|
||||
@@ -176,8 +176,146 @@ void SmemPAVectorMassApply3D(const int NE,
|
||||
});
|
||||
}
|
||||
|
||||
template <int T_Q1D = 0, int T_MDQ = 16>
|
||||
static void SmemPAVectorMassAssembleDiagonal2D(const int ne,
|
||||
const int d1d,
|
||||
const int q1d,
|
||||
const real_t *b_r,
|
||||
const real_t *d_r,
|
||||
real_t *y_rw)
|
||||
{
|
||||
constexpr int VDIM = 2;
|
||||
|
||||
const int D1D = d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(Q1D <= T_MDQ && D1D <= Q1D, "");
|
||||
|
||||
const auto B = Reshape(b_r, Q1D, D1D);
|
||||
const auto D = Reshape(d_r, Q1D, Q1D, ne);
|
||||
auto Y = Reshape(y_rw, D1D, D1D, VDIM, ne);
|
||||
|
||||
mfem::forall_2D<T_Q1D*T_Q1D>(
|
||||
ne, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : T_MDQ;
|
||||
|
||||
MFEM_SHARED real_t sm[MQ1][MQ1];
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
u += B(qy, dy) * B(qy, dy) * D(qx, qy, e);
|
||||
}
|
||||
sm[qx][dy] = u;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dx, x, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
u += B(qx, dx) * B(qx, dx) * sm[qx][dy];
|
||||
}
|
||||
Y(dx, dy, 0, e) += u;
|
||||
Y(dx, dy, 1, e) += u;
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
// T_MDQ <= 10 so the Q1D^3 thread block stays within the 1024/block GPU limit
|
||||
template <int T_Q1D = 0, int T_MDQ = 10>
|
||||
static void SmemPAVectorMassAssembleDiagonal3D(const int ne,
|
||||
const int d1d,
|
||||
const int q1d,
|
||||
const real_t *b_r,
|
||||
const real_t *d_r,
|
||||
real_t *y_rw)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
|
||||
const int D1D = d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(Q1D <= T_MDQ && D1D <= Q1D, "");
|
||||
|
||||
const auto B = Reshape(b_r, Q1D, D1D);
|
||||
const auto D = Reshape(d_r, Q1D, Q1D, Q1D, ne);
|
||||
auto Y = Reshape(y_rw, D1D, D1D, D1D, VDIM, ne);
|
||||
|
||||
mfem::forall_3D<T_Q1D*T_Q1D*T_Q1D>(
|
||||
ne, Q1D, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : T_MDQ;
|
||||
|
||||
MFEM_SHARED real_t sm[2][MQ1][MQ1][MQ1];
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
u += B(qz, dz) * B(qz, dz) * D(qx, qy, qz, e);
|
||||
}
|
||||
sm[0][dz][qy][qx] = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
u += B(qy, dy) * B(qy, dy) * sm[0][dz][qy][qx];
|
||||
}
|
||||
sm[1][dz][dy][qx] = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dx, x, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
u += B(qx, dx) * B(qx, dx) * sm[1][dz][dy][qx];
|
||||
}
|
||||
Y(dx, dy, dz, 0, e) += u;
|
||||
Y(dx, dy, dz, 1, e) += u;
|
||||
Y(dx, dy, dz, 2, e) += u;
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
} // namespace internal
|
||||
|
||||
// AddMultPA kernels
|
||||
template<int DIM, int T_D1D, int T_Q1D>
|
||||
VectorMassIntegrator::VectorMassAddMultPAType
|
||||
VectorMassIntegrator::VectorMassAddMultPA::Kernel()
|
||||
@@ -194,7 +332,7 @@ VectorMassIntegrator::VectorMassAddMultPA::Kernel()
|
||||
}
|
||||
|
||||
inline VectorMassIntegrator::VectorMassAddMultPAType
|
||||
VectorMassIntegrator::VectorMassAddMultPA::Fallback(int dim, int d1d, int q1d)
|
||||
VectorMassIntegrator::VectorMassAddMultPA::Fallback(int dim, int, int)
|
||||
{
|
||||
if (dim == 2)
|
||||
{
|
||||
@@ -204,7 +342,37 @@ VectorMassIntegrator::VectorMassAddMultPA::Fallback(int dim, int d1d, int q1d)
|
||||
{
|
||||
return internal::SmemPAVectorMassApply3D;
|
||||
}
|
||||
else { MFEM_ABORT("Unsupported kernel"); }
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
// DiagonalPA kernels
|
||||
template<int DIM, int T_Q1D>
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPAType
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Kernel()
|
||||
{
|
||||
if constexpr (DIM == 2)
|
||||
{
|
||||
return internal::SmemPAVectorMassAssembleDiagonal2D<T_Q1D>;
|
||||
}
|
||||
else if constexpr (DIM == 3)
|
||||
{
|
||||
return internal::SmemPAVectorMassAssembleDiagonal3D<T_Q1D>;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
inline VectorMassIntegrator::VectorMassAssembleDiagonalPAType
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Fallback(int dim, int)
|
||||
{
|
||||
if (dim == 2)
|
||||
{
|
||||
return internal::SmemPAVectorMassAssembleDiagonal2D;
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
return internal::SmemPAVectorMassAssembleDiagonal3D;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
@@ -13,10 +13,6 @@
|
||||
#define MFEM_BILININTEG_VECTORFEMASS_KERNELS_HPP
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
#include "../../general/array.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/dtensor.hpp"
|
||||
#include "../../linalg/vector.hpp"
|
||||
#include "../bilininteg.hpp"
|
||||
|
||||
#include "bilininteg_diffusion_kernels.hpp"
|
||||
@@ -77,15 +73,8 @@ VectorFEMassIntegrator::ApplyPAKernels::Kernel()
|
||||
}
|
||||
else if constexpr (trial_div && test_div)
|
||||
{
|
||||
if (Device::Allows(Backend::DEVICE_MASK))
|
||||
{
|
||||
// assumes TrialD1D == TestD1D
|
||||
return internal::SmemPAHdivMassApply3D<TrialD1D, Q1D>;
|
||||
}
|
||||
else
|
||||
{
|
||||
return internal::PAHdivMassApply3D;
|
||||
}
|
||||
// assumes TrialD1D == TestD1D
|
||||
return internal::SmemPAHdivMassApply3D<TrialD1D, Q1D>;
|
||||
}
|
||||
else if constexpr (trial_curl && test_div)
|
||||
{
|
||||
@@ -104,15 +93,8 @@ VectorFEMassIntegrator::ApplyPAKernels::Kernel()
|
||||
}
|
||||
else if constexpr (trial_div && test_div)
|
||||
{
|
||||
if (Device::Allows(Backend::DEVICE_MASK))
|
||||
{
|
||||
// assumes TrialD1D == TestD1D
|
||||
return internal::SmemPAHdivMassApply2D<TrialD1D, Q1D>;
|
||||
}
|
||||
else
|
||||
{
|
||||
return internal::PAHdivMassApply2D;
|
||||
}
|
||||
// assumes TrialD1D == TestD1D
|
||||
return internal::SmemPAHdivMassApply2D<TrialD1D, Q1D>;
|
||||
}
|
||||
else if constexpr (trial_curl && test_div)
|
||||
{
|
||||
|
||||
@@ -10,8 +10,6 @@
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "../bilininteg.hpp"
|
||||
#include "../gridfunc.hpp"
|
||||
#include "../qfunction.hpp"
|
||||
#include "bilininteg_vectorfemass_kernels.hpp"
|
||||
|
||||
namespace mfem
|
||||
@@ -72,17 +70,7 @@ VectorFEMassIntegrator::ApplyPAKernels::Fallback(
|
||||
VectorFEMassIntegrator::Kernels::Kernels()
|
||||
{
|
||||
// h(curl), h(curl)
|
||||
// P = Q (3D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 2, 2, 2>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 3, 3, 3>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 4, 4, 4>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 5, 5, 5>();
|
||||
|
||||
// P = Q + 1 (3D)
|
||||
// Q = P + 1 (3D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 2, 2, 3>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
@@ -91,8 +79,26 @@ VectorFEMassIntegrator::Kernels::Kernels()
|
||||
FiniteElement::CURL, 3, 4, 4, 5>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 5, 5, 6>();
|
||||
// Q = P + 2 (3D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 2, 2, 4>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 3, 3, 5>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 4, 4, 6>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 5, 5, 7>();
|
||||
// Q = P + 4 (3D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 2, 2, 6>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 3, 3, 7>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 4, 4, 8>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 5, 5, 9>();
|
||||
// h(div), h(div)
|
||||
// P = Q (2D)
|
||||
// Q = P (2D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 2, 2, 2, 2>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
@@ -102,7 +108,7 @@ VectorFEMassIntegrator::Kernels::Kernels()
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 2, 5, 5, 5>();
|
||||
|
||||
// P = Q + 1 (3D)
|
||||
// Q = P + 1 (3D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 3, 2, 2, 3>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
@@ -333,8 +339,6 @@ void VectorFEMassIntegrator::AddAbsMultPA(const Vector &x, Vector &y) const
|
||||
|
||||
Array<real_t> absBo(mapsO->B);
|
||||
Array<real_t> absBc(mapsC->B);
|
||||
// Array<real_t> absBto(mapsO->Bt);
|
||||
// Array<real_t> absBtc(mapsC->Bt);
|
||||
Array<real_t> absBto_t(mapsOtest->Bt);
|
||||
Array<real_t> absBtc_t(mapsCtest->Bt);
|
||||
|
||||
|
||||
@@ -9,21 +9,51 @@
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../nonlininteg.hpp"
|
||||
#include "../ceed/integrators/nlconvection/nlconvection.hpp"
|
||||
#include "./nonlininteg_vecconvection_pa.hpp" // IWYU pragma: keep
|
||||
#include "./nonlininteg_vecconvection_pa_grad.hpp" // IWYU pragma: keep
|
||||
#include "./nonlininteg_vecconvection_pa_diag.hpp" // IWYU pragma: keep
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
VectorConvectionNLFIntegrator::Kernels::Kernels()
|
||||
{
|
||||
// 2D
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 2, 2>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 2, 3>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 3, 4>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 3, 5>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 4, 5>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 4, 6>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 5, 7>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 5, 8>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 6, 8>();
|
||||
// 3D
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 2, 3>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 2, 4>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 2, 5>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 3, 4>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 3, 5>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 3, 6>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 4, 5>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 4, 6>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 4, 7>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 4, 8>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 5, 6>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 5, 7>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 5, 8>();
|
||||
}
|
||||
|
||||
void VectorConvectionNLFIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
{
|
||||
MFEM_ASSERT(fes.GetOrdering() == Ordering::byNODES,
|
||||
"PA Only supports Ordering::byNODES!");
|
||||
Mesh *mesh = fes.GetMesh();
|
||||
const FiniteElement &el = *fes.GetTypicalFE();
|
||||
ElementTransformation &T = *mesh->GetTypicalElementTransformation();
|
||||
const IntegrationRule *ir = IntRule ? IntRule : &GetRule(el, T);
|
||||
ElementTransformation &Tr = *mesh->GetTypicalElementTransformation();
|
||||
const IntegrationRule *ir = IntRule ? IntRule : &GetRule(el, Tr);
|
||||
|
||||
if (DeviceCanUseCeed())
|
||||
{
|
||||
delete ceedOp;
|
||||
@@ -39,769 +69,124 @@ void VectorConvectionNLFIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
}
|
||||
return;
|
||||
}
|
||||
dim = mesh->Dimension();
|
||||
ne = fes.GetMesh()->GetNE();
|
||||
|
||||
ne = mesh->GetNE();
|
||||
nq = ir->GetNPoints();
|
||||
geom = mesh->GetGeometricFactors(*ir, GeometricFactors::JACOBIANS);
|
||||
dim = mesh->Dimension();
|
||||
MFEM_VERIFY(dim == 2 || dim == 3, "Dimension not supported");
|
||||
|
||||
const MemoryType mt = pa_mt == MemoryType::DEFAULT
|
||||
? Device::GetDeviceMemoryType()
|
||||
: pa_mt;
|
||||
pa_adj.SetSize(ne * nq * dim * dim, mt);
|
||||
geom = mesh->GetGeometricFactors(*ir, GeometricFactors::JACOBIANS, mt);
|
||||
maps = &el.GetDofToQuad(*ir, DofToQuad::TENSOR);
|
||||
pa_data.SetSize(ne * nq * dim * dim, Device::GetMemoryType());
|
||||
real_t COEFF = 1.0;
|
||||
if (Q)
|
||||
{
|
||||
ConstantCoefficient *cQ = dynamic_cast<ConstantCoefficient *>(Q);
|
||||
MFEM_VERIFY(cQ != NULL, "only ConstantCoefficient is supported!");
|
||||
COEFF = cQ->constant;
|
||||
}
|
||||
const int NE = ne;
|
||||
const int NQ = nq;
|
||||
auto W = ir->GetWeights().Read();
|
||||
if (dim == 1)
|
||||
{
|
||||
MFEM_ABORT("dim==1 not supported!");
|
||||
}
|
||||
d1d = maps->ndof;
|
||||
q1d = maps->nqpt;
|
||||
|
||||
QuadratureSpace qs(*mesh, *ir);
|
||||
CoefficientVector coeff(Q, qs, CoefficientStorage::COMPRESSED);
|
||||
|
||||
const int nq1d = q1d * q1d * (dim==3 ? q1d : 1);
|
||||
MFEM_VERIFY(coeff.Size() == 1 || coeff.Size() == nq1d*ne, "Invalid coeff");
|
||||
MFEM_VERIFY(ir->GetWeights().Size() == nq1d, "Invalid weights size");
|
||||
|
||||
const auto w_r = ir->GetWeights().Read();
|
||||
const bool const_coeff = coeff.Size() == 1;
|
||||
|
||||
if (dim == 2)
|
||||
{
|
||||
auto J = Reshape(geom->J.Read(), NQ, 2, 2, NE);
|
||||
auto G = Reshape(pa_data.Write(), NQ, 2, 2, NE);
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
const int Q1D = q1d;
|
||||
constexpr int VDIM = 2, DIM = 2;
|
||||
const auto W = Reshape(w_r, Q1D, Q1D);
|
||||
const auto C = const_coeff ?
|
||||
Reshape(coeff.Read(), 1, 1, 1) :
|
||||
Reshape(coeff.Read(), Q1D, Q1D, ne);
|
||||
const auto J = Reshape(geom->J.Read(), Q1D, Q1D, VDIM, DIM, ne);
|
||||
auto A = Reshape(pa_adj.Write(), VDIM, DIM, Q1D, Q1D, ne);
|
||||
|
||||
mfem::forall_2D(ne, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
for (int q = 0; q < NQ; ++q)
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
const real_t J11 = J(q, 0, 0, e);
|
||||
const real_t J12 = J(q, 0, 1, e);
|
||||
const real_t J21 = J(q, 1, 0, e);
|
||||
const real_t J22 = J(q, 1, 1, e);
|
||||
// Store wq * Q * adj(J)
|
||||
G(q, 0, 0, e) = W[q] * COEFF * J22; // 1,1
|
||||
G(q, 0, 1, e) = W[q] * COEFF * -J12; // 1,2
|
||||
G(q, 1, 0, e) = W[q] * COEFF * -J21; // 2,1
|
||||
G(q, 1, 1, e) = W[q] * COEFF * J11; // 2,2
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
const real_t J11 = J(qx, qy, 0, 0, e), J12 = J(qx, qy, 0, 1, e);
|
||||
const real_t J21 = J(qx, qy, 1, 0, e), J22 = J(qx, qy, 1, 1, e);
|
||||
// adj(J)
|
||||
const real_t A11 = +J22, A12 = -J12;
|
||||
const real_t A21 = -J21, A22 = +J11;
|
||||
// Store w * coeff * adj(J)
|
||||
const real_t w = W(qx, qy);
|
||||
const real_t c = const_coeff ? C(0, 0, 0) : C(qx, qy, e);
|
||||
A(0, 0, qx, qy, e) = w * c * A11;
|
||||
A(1, 0, qx, qy, e) = w * c * A12;
|
||||
A(0, 1, qx, qy, e) = w * c * A21;
|
||||
A(1, 1, qx, qy, e) = w * c * A22;
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
if (dim == 3)
|
||||
else if (dim == 3)
|
||||
{
|
||||
auto J = Reshape(geom->J.Read(), NQ, 3, 3, NE);
|
||||
auto G = Reshape(pa_data.Write(), NQ, 3, 3, NE);
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
const int Q1D = q1d;
|
||||
constexpr int VDIM = 3, DIM = 3;
|
||||
const auto W = Reshape(w_r, Q1D, Q1D, Q1D);
|
||||
const auto C = const_coeff ?
|
||||
Reshape(coeff.Read(), 1, 1, 1, 1) :
|
||||
Reshape(coeff.Read(), Q1D, Q1D, Q1D, ne);
|
||||
const auto J = Reshape(geom->J.Read(), Q1D, Q1D, Q1D, VDIM, DIM, ne);
|
||||
auto A = Reshape(pa_adj.Write(), VDIM, DIM, Q1D, Q1D, Q1D, ne);
|
||||
|
||||
mfem::forall_3D(ne, Q1D, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
for (int q = 0; q < NQ; ++q)
|
||||
MFEM_FOREACH_THREAD_DIRECT(qz, z, Q1D)
|
||||
{
|
||||
const real_t J11 = J(q, 0, 0, e);
|
||||
const real_t J21 = J(q, 1, 0, e);
|
||||
const real_t J31 = J(q, 2, 0, e);
|
||||
const real_t J12 = J(q, 0, 1, e);
|
||||
const real_t J22 = J(q, 1, 1, e);
|
||||
const real_t J32 = J(q, 2, 1, e);
|
||||
const real_t J13 = J(q, 0, 2, e);
|
||||
const real_t J23 = J(q, 1, 2, e);
|
||||
const real_t J33 = J(q, 2, 2, e);
|
||||
const real_t cw = W[q] * COEFF;
|
||||
// adj(J)
|
||||
const real_t A11 = (J22 * J33) - (J23 * J32);
|
||||
const real_t A12 = (J32 * J13) - (J12 * J33);
|
||||
const real_t A13 = (J12 * J23) - (J22 * J13);
|
||||
const real_t A21 = (J31 * J23) - (J21 * J33);
|
||||
const real_t A22 = (J11 * J33) - (J13 * J31);
|
||||
const real_t A23 = (J21 * J13) - (J11 * J23);
|
||||
const real_t A31 = (J21 * J32) - (J31 * J22);
|
||||
const real_t A32 = (J31 * J12) - (J11 * J32);
|
||||
const real_t A33 = (J11 * J22) - (J12 * J21);
|
||||
// Store wq * Q * adj(J)
|
||||
G(q, 0, 0, e) = cw * A11; // 1,1
|
||||
G(q, 0, 1, e) = cw * A12; // 1,2
|
||||
G(q, 0, 2, e) = cw * A13; // 1,3
|
||||
G(q, 1, 0, e) = cw * A21; // 2,1
|
||||
G(q, 1, 1, e) = cw * A22; // 2,2
|
||||
G(q, 1, 2, e) = cw * A23; // 2,3
|
||||
G(q, 2, 0, e) = cw * A31; // 3,1
|
||||
G(q, 2, 1, e) = cw * A32; // 3,2
|
||||
G(q, 2, 2, e) = cw * A33; // 3,3
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
const real_t J11 = J(qx, qy, qz, 0, 0, e),
|
||||
J12 = J(qx, qy, qz, 0, 1, e),
|
||||
J13 = J(qx, qy, qz, 0, 2, e);
|
||||
const real_t J21 = J(qx, qy, qz, 1, 0, e),
|
||||
J22 = J(qx, qy, qz, 1, 1, e),
|
||||
J23 = J(qx, qy, qz, 1, 2, e);
|
||||
const real_t J31 = J(qx, qy, qz, 2, 0, e),
|
||||
J32 = J(qx, qy, qz, 2, 1, e),
|
||||
J33 = J(qx, qy, qz, 2, 2, e);
|
||||
const real_t c =
|
||||
const_coeff ? C(0, 0, 0, 0) : C(qx, qy, qz, e);
|
||||
const real_t cw = W(qx, qy, qz) * c;
|
||||
// adj(J)
|
||||
const real_t A11 = (J22 * J33) - (J23 * J32);
|
||||
const real_t A12 = (J32 * J13) - (J12 * J33);
|
||||
const real_t A13 = (J12 * J23) - (J22 * J13);
|
||||
const real_t A21 = (J31 * J23) - (J21 * J33);
|
||||
const real_t A22 = (J11 * J33) - (J13 * J31);
|
||||
const real_t A23 = (J21 * J13) - (J11 * J23);
|
||||
const real_t A31 = (J21 * J32) - (J31 * J22);
|
||||
const real_t A32 = (J31 * J12) - (J11 * J32);
|
||||
const real_t A33 = (J11 * J22) - (J12 * J21);
|
||||
// Store wq * coeff * adj(J)
|
||||
A(0, 0, qx, qy, qz, e) = cw * A11;
|
||||
A(1, 0, qx, qy, qz, e) = cw * A12;
|
||||
A(2, 0, qx, qy, qz, e) = cw * A13;
|
||||
A(0, 1, qx, qy, qz, e) = cw * A21;
|
||||
A(1, 1, qx, qy, qz, e) = cw * A22;
|
||||
A(2, 1, qx, qy, qz, e) = cw * A23;
|
||||
A(0, 2, qx, qy, qz, e) = cw * A31;
|
||||
A(1, 2, qx, qy, qz, e) = cw * A32;
|
||||
A(2, 2, qx, qy, qz, e) = cw * A33;
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
}
|
||||
|
||||
// PA Convection NL 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAConvectionNLApply2D(const int NE,
|
||||
const Array<real_t> &b,
|
||||
const Array<real_t> &g,
|
||||
const Array<real_t> &bt,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
MFEM_VERIFY(D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
auto B = Reshape(b.Read(), Q1D, D1D);
|
||||
auto G = Reshape(g.Read(), Q1D, D1D);
|
||||
auto Bt = Reshape(bt.Read(), D1D, Q1D);
|
||||
auto Q = Reshape(q_.Read(), Q1D * Q1D, 2, 2, NE);
|
||||
auto x = Reshape(x_.Read(), D1D, D1D, 2, NE);
|
||||
auto y = Reshape(y_.ReadWrite(), D1D, D1D, 2, NE);
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
else
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int max_D1D = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int max_Q1D = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
real_t data[max_Q1D][max_Q1D][2];
|
||||
real_t grad0[max_Q1D][max_Q1D][2];
|
||||
real_t grad1[max_Q1D][max_Q1D][2];
|
||||
real_t Z[max_Q1D][max_Q1D][2];
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
data[qy][qx][0] = 0.0;
|
||||
data[qy][qx][1] = 0.0;
|
||||
grad0[qy][qx][0] = 0.0;
|
||||
grad0[qy][qx][1] = 0.0;
|
||||
grad1[qy][qx][0] = 0.0;
|
||||
grad1[qy][qx][1] = 0.0;
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
real_t dataX[max_Q1D][2];
|
||||
real_t gradX0[max_Q1D][2];
|
||||
real_t gradX1[max_Q1D][2];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
dataX[qx][0] = 0.0;
|
||||
dataX[qx][1] = 0.0;
|
||||
gradX0[qx][0] = 0.0;
|
||||
gradX0[qx][1] = 0.0;
|
||||
gradX1[qx][0] = 0.0;
|
||||
gradX1[qx][1] = 0.0;
|
||||
}
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t s0 = x(dx, dy, 0, e);
|
||||
const real_t s1 = x(dx, dy, 1, e);
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Bx = B(qx, dx);
|
||||
const real_t Gx = G(qx, dx);
|
||||
dataX[qx][0] += s0 * Bx;
|
||||
dataX[qx][1] += s1 * Bx;
|
||||
gradX0[qx][0] += s0 * Gx;
|
||||
gradX0[qx][1] += s0 * Bx;
|
||||
gradX1[qx][0] += s1 * Gx;
|
||||
gradX1[qx][1] += s1 * Bx;
|
||||
}
|
||||
}
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
const real_t By = B(qy, dy);
|
||||
const real_t Gy = G(qy, dy);
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
data[qy][qx][0] += dataX[qx][0] * By;
|
||||
data[qy][qx][1] += dataX[qx][1] * By;
|
||||
grad0[qy][qx][0] += gradX0[qx][0] * By;
|
||||
grad0[qy][qx][1] += gradX0[qx][1] * Gy;
|
||||
grad1[qy][qx][0] += gradX1[qx][0] * By;
|
||||
grad1[qy][qx][1] += gradX1[qx][1] * Gy;
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const int q = qx + qy * Q1D;
|
||||
const real_t u1 = data[qy][qx][0];
|
||||
const real_t u2 = data[qy][qx][1];
|
||||
const real_t grad00 = grad0[qy][qx][0];
|
||||
const real_t grad01 = grad0[qy][qx][1];
|
||||
const real_t grad10 = grad1[qy][qx][0];
|
||||
const real_t grad11 = grad1[qy][qx][1];
|
||||
const real_t Dxu1 = grad00 * Q(q, 0, 0, e) + grad01 * Q(q, 1, 0, e);
|
||||
const real_t Dyu1 = grad00 * Q(q, 0, 1, e) + grad01 * Q(q, 1, 1, e);
|
||||
const real_t Dxu2 = grad10 * Q(q, 0, 0, e) + grad11 * Q(q, 1, 0, e);
|
||||
const real_t Dyu2 = grad10 * Q(q, 0, 1, e) + grad11 * Q(q, 1, 1, e);
|
||||
Z[qy][qx][0] = u1 * Dxu1 + u2 * Dyu1;
|
||||
Z[qy][qx][1] = u1 * Dxu2 + u2 * Dyu2;
|
||||
}
|
||||
}
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
real_t Y[max_D1D][2];
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
Y[dx][0] = 0.0;
|
||||
Y[dx][1] = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Btx = Bt(dx, qx);
|
||||
Y[dx][0] += Btx * Z[qy][qx][0];
|
||||
Y[dx][1] += Btx * Z[qy][qx][1];
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t Bty = Bt(dy, qy);
|
||||
y(dx, dy, 0, e) += Bty * Y[dx][0];
|
||||
y(dx, dy, 1, e) += Bty * Y[dx][1];
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
// PA Convection NL 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAConvectionNLApply3D(const int NE,
|
||||
const Array<real_t> &b,
|
||||
const Array<real_t> &g,
|
||||
const Array<real_t> &bt,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
MFEM_VERIFY(D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
|
||||
auto B = Reshape(b.Read(), Q1D, D1D);
|
||||
auto G = Reshape(g.Read(), Q1D, D1D);
|
||||
auto Bt = Reshape(bt.Read(), D1D, Q1D);
|
||||
auto Q = Reshape(q_.Read(), Q1D * Q1D * Q1D, VDIM, VDIM, NE);
|
||||
auto x = Reshape(x_.Read(), D1D, D1D, D1D, VDIM, NE);
|
||||
auto y = Reshape(y_.ReadWrite(), D1D, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int max_D1D = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int max_Q1D = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
real_t data[max_Q1D][max_Q1D][max_Q1D][VDIM];
|
||||
real_t grad0[max_Q1D][max_Q1D][max_Q1D][VDIM];
|
||||
real_t grad1[max_Q1D][max_Q1D][max_Q1D][VDIM];
|
||||
real_t grad2[max_Q1D][max_Q1D][max_Q1D][VDIM];
|
||||
real_t Z[max_Q1D][max_Q1D][max_Q1D][VDIM];
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
data[qz][qy][qx][0] = 0.0;
|
||||
data[qz][qy][qx][1] = 0.0;
|
||||
data[qz][qy][qx][2] = 0.0;
|
||||
|
||||
grad0[qz][qy][qx][0] = 0.0;
|
||||
grad0[qz][qy][qx][1] = 0.0;
|
||||
grad0[qz][qy][qx][2] = 0.0;
|
||||
|
||||
grad1[qz][qy][qx][0] = 0.0;
|
||||
grad1[qz][qy][qx][1] = 0.0;
|
||||
grad1[qz][qy][qx][2] = 0.0;
|
||||
|
||||
grad2[qz][qy][qx][0] = 0.0;
|
||||
grad2[qz][qy][qx][1] = 0.0;
|
||||
grad2[qz][qy][qx][2] = 0.0;
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
real_t dataXY[max_Q1D][max_Q1D][VDIM];
|
||||
real_t gradXY0[max_Q1D][max_Q1D][VDIM];
|
||||
real_t gradXY1[max_Q1D][max_Q1D][VDIM];
|
||||
real_t gradXY2[max_Q1D][max_Q1D][VDIM];
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
dataXY[qy][qx][0] = 0.0;
|
||||
dataXY[qy][qx][1] = 0.0;
|
||||
dataXY[qy][qx][2] = 0.0;
|
||||
|
||||
gradXY0[qy][qx][0] = 0.0;
|
||||
gradXY0[qy][qx][1] = 0.0;
|
||||
gradXY0[qy][qx][2] = 0.0;
|
||||
|
||||
gradXY1[qy][qx][0] = 0.0;
|
||||
gradXY1[qy][qx][1] = 0.0;
|
||||
gradXY1[qy][qx][2] = 0.0;
|
||||
|
||||
gradXY2[qy][qx][0] = 0.0;
|
||||
gradXY2[qy][qx][1] = 0.0;
|
||||
gradXY2[qy][qx][2] = 0.0;
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
real_t dataX[max_Q1D][VDIM];
|
||||
real_t gradX0[max_Q1D][VDIM];
|
||||
real_t gradX1[max_Q1D][VDIM];
|
||||
real_t gradX2[max_Q1D][VDIM];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
dataX[qx][0] = 0.0;
|
||||
dataX[qx][1] = 0.0;
|
||||
dataX[qx][2] = 0.0;
|
||||
|
||||
gradX0[qx][0] = 0.0;
|
||||
gradX0[qx][1] = 0.0;
|
||||
gradX0[qx][2] = 0.0;
|
||||
|
||||
gradX1[qx][0] = 0.0;
|
||||
gradX1[qx][1] = 0.0;
|
||||
gradX1[qx][2] = 0.0;
|
||||
|
||||
gradX2[qx][0] = 0.0;
|
||||
gradX2[qx][1] = 0.0;
|
||||
gradX2[qx][2] = 0.0;
|
||||
}
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t s0 = x(dx, dy, dz, 0, e);
|
||||
const real_t s1 = x(dx, dy, dz, 1, e);
|
||||
const real_t s2 = x(dx, dy, dz, 2, e);
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Bx = B(qx, dx);
|
||||
const real_t Gx = G(qx, dx);
|
||||
|
||||
dataX[qx][0] += s0 * Bx;
|
||||
dataX[qx][1] += s1 * Bx;
|
||||
dataX[qx][2] += s2 * Bx;
|
||||
|
||||
gradX0[qx][0] += s0 * Gx;
|
||||
gradX0[qx][1] += s0 * Bx;
|
||||
gradX0[qx][2] += s0 * Bx;
|
||||
|
||||
gradX1[qx][0] += s1 * Gx;
|
||||
gradX1[qx][1] += s1 * Bx;
|
||||
gradX1[qx][2] += s1 * Bx;
|
||||
|
||||
gradX2[qx][0] += s2 * Gx;
|
||||
gradX2[qx][1] += s2 * Bx;
|
||||
gradX2[qx][2] += s2 * Bx;
|
||||
}
|
||||
}
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
const real_t By = B(qy, dy);
|
||||
const real_t Gy = G(qy, dy);
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
dataXY[qy][qx][0] += dataX[qx][0] * By;
|
||||
dataXY[qy][qx][1] += dataX[qx][1] * By;
|
||||
dataXY[qy][qx][2] += dataX[qx][2] * By;
|
||||
|
||||
gradXY0[qy][qx][0] += gradX0[qx][0] * By;
|
||||
gradXY0[qy][qx][1] += gradX0[qx][1] * Gy;
|
||||
gradXY0[qy][qx][2] += gradX0[qx][2] * By;
|
||||
|
||||
gradXY1[qy][qx][0] += gradX1[qx][0] * By;
|
||||
gradXY1[qy][qx][1] += gradX1[qx][1] * Gy;
|
||||
gradXY1[qy][qx][2] += gradX1[qx][2] * By;
|
||||
|
||||
gradXY2[qy][qx][0] += gradX2[qx][0] * By;
|
||||
gradXY2[qy][qx][1] += gradX2[qx][1] * Gy;
|
||||
gradXY2[qy][qx][2] += gradX2[qx][2] * By;
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
const real_t Bz = B(qz, dz);
|
||||
const real_t Gz = G(qz, dz);
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
data[qz][qy][qx][0] += dataXY[qy][qx][0] * Bz;
|
||||
data[qz][qy][qx][1] += dataXY[qy][qx][1] * Bz;
|
||||
data[qz][qy][qx][2] += dataXY[qy][qx][2] * Bz;
|
||||
|
||||
grad0[qz][qy][qx][0] += gradXY0[qy][qx][0] * Bz;
|
||||
grad0[qz][qy][qx][1] += gradXY0[qy][qx][1] * Bz;
|
||||
grad0[qz][qy][qx][2] += gradXY0[qy][qx][2] * Gz;
|
||||
|
||||
grad1[qz][qy][qx][0] += gradXY1[qy][qx][0] * Bz;
|
||||
grad1[qz][qy][qx][1] += gradXY1[qy][qx][1] * Bz;
|
||||
grad1[qz][qy][qx][2] += gradXY1[qy][qx][2] * Gz;
|
||||
|
||||
grad2[qz][qy][qx][0] += gradXY2[qy][qx][0] * Bz;
|
||||
grad2[qz][qy][qx][1] += gradXY2[qy][qx][1] * Bz;
|
||||
grad2[qz][qy][qx][2] += gradXY2[qy][qx][2] * Gz;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const int q = qx + Q1D * (qy + qz * Q1D);
|
||||
|
||||
const real_t u1 = data[qz][qy][qx][0];
|
||||
const real_t u2 = data[qz][qy][qx][1];
|
||||
const real_t u3 = data[qz][qy][qx][2];
|
||||
|
||||
const real_t grad00 = grad0[qz][qy][qx][0];
|
||||
const real_t grad01 = grad0[qz][qy][qx][1];
|
||||
const real_t grad02 = grad0[qz][qy][qx][2];
|
||||
|
||||
const real_t grad10 = grad1[qz][qy][qx][0];
|
||||
const real_t grad11 = grad1[qz][qy][qx][1];
|
||||
const real_t grad12 = grad1[qz][qy][qx][2];
|
||||
|
||||
const real_t grad20 = grad2[qz][qy][qx][0];
|
||||
const real_t grad21 = grad2[qz][qy][qx][1];
|
||||
const real_t grad22 = grad2[qz][qy][qx][2];
|
||||
|
||||
const real_t Dxu1 = grad00 * Q(q, 0, 0, e)
|
||||
+ grad01 * Q(q, 1, 0, e)
|
||||
+ grad02 * Q(q, 2, 0, e);
|
||||
const real_t Dyu1 = grad00 * Q(q, 0, 1, e)
|
||||
+ grad01 * Q(q, 1, 1, e)
|
||||
+ grad02 * Q(q, 2, 1, e);
|
||||
const real_t Dzu1 = grad00 * Q(q, 0, 2, e)
|
||||
+ grad01 * Q(q, 1, 2, e)
|
||||
+ grad02 * Q(q, 2, 2, e);
|
||||
|
||||
const real_t Dxu2 = grad10 * Q(q, 0, 0, e)
|
||||
+ grad11 * Q(q, 1, 0, e)
|
||||
+ grad12 * Q(q, 2, 0, e);
|
||||
const real_t Dyu2 = grad10 * Q(q, 0, 1, e)
|
||||
+ grad11 * Q(q, 1, 1, e)
|
||||
+ grad12 * Q(q, 2, 1, e);
|
||||
const real_t Dzu2 = grad10 * Q(q, 0, 2, e)
|
||||
+ grad11 * Q(q, 1, 2, e)
|
||||
+ grad12 * Q(q, 2, 2, e);
|
||||
|
||||
const real_t Dxu3 = grad20 * Q(q, 0, 0, e)
|
||||
+ grad21 * Q(q, 1, 0, e)
|
||||
+ grad22 * Q(q, 2, 0, e);
|
||||
const real_t Dyu3 = grad20 * Q(q, 0, 1, e)
|
||||
+ grad21 * Q(q, 1, 1, e)
|
||||
+ grad22 * Q(q, 2, 1, e);
|
||||
const real_t Dzu3 = grad20 * Q(q, 0, 2, e)
|
||||
+ grad21 * Q(q, 1, 2, e)
|
||||
+ grad22 * Q(q, 2, 2, e);
|
||||
|
||||
Z[qz][qy][qx][0] = u1 * Dxu1 + u2 * Dyu1 + u3 * Dzu1;
|
||||
Z[qz][qy][qx][1] = u1 * Dxu2 + u2 * Dyu2 + u3 * Dzu2;
|
||||
Z[qz][qy][qx][2] = u1 * Dxu3 + u2 * Dyu3 + u3 * Dzu3;
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
real_t opXY[max_D1D][max_D1D][VDIM];
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
opXY[dy][dx][0] = 0.0;
|
||||
opXY[dy][dx][1] = 0.0;
|
||||
opXY[dy][dx][2] = 0.0;
|
||||
}
|
||||
}
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
real_t opX[max_D1D][VDIM];
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
opX[dx][0] = 0.0;
|
||||
opX[dx][1] = 0.0;
|
||||
opX[dx][2] = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Btx = Bt(dx, qx);
|
||||
opX[dx][0] += Btx * Z[qz][qy][qx][0];
|
||||
opX[dx][1] += Btx * Z[qz][qy][qx][1];
|
||||
opX[dx][2] += Btx * Z[qz][qy][qx][2];
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t Bty = Bt(dy, qy);
|
||||
opXY[dy][dx][0] += Bty * opX[dx][0];
|
||||
opXY[dy][dx][1] += Bty * opX[dx][1];
|
||||
opXY[dy][dx][2] += Bty * opX[dx][2];
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t Btz = Bt(dz, qz);
|
||||
y(dx, dy, dz, 0, e) += Btz * opXY[dy][dx][0];
|
||||
y(dx, dy, dz, 1, e) += Btz * opXY[dy][dx][1];
|
||||
y(dx, dy, dz, 2, e) += Btz * opXY[dy][dx][2];
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_MAX_D1D = 0, int T_MAX_Q1D = 0>
|
||||
static void SmemPAConvectionNLApply3D(const int NE,
|
||||
const Array<real_t> &b_,
|
||||
const Array<real_t> &g_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int MD1 = T_D1D ? T_D1D : T_MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : T_MAX_Q1D;
|
||||
MFEM_VERIFY(D1D <= MD1, "");
|
||||
MFEM_VERIFY(Q1D <= MQ1, "");
|
||||
|
||||
auto b = Reshape(b_.Read(), Q1D, D1D);
|
||||
auto g = Reshape(g_.Read(), Q1D, D1D);
|
||||
auto D = Reshape(d_.Read(), Q1D * Q1D * Q1D, VDIM, VDIM, NE);
|
||||
auto x = Reshape(x_.Read(), D1D, D1D, D1D, VDIM, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), D1D, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall_3D(NE, Q1D, Q1D, Q1D, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
const int tidz = MFEM_THREAD_ID(z);
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int MD1 = T_D1D ? T_D1D : T_MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : T_MAX_Q1D;
|
||||
MFEM_SHARED real_t BG[2][MQ1 * MD1];
|
||||
real_t(*B)[MD1] = (real_t(*)[MD1])(BG + 0);
|
||||
real_t(*G)[MD1] = (real_t(*)[MD1])(BG + 1);
|
||||
real_t(*Bt)[MQ1] = (real_t(*)[MQ1])(BG + 0);
|
||||
MFEM_SHARED real_t U[2][MQ1][MQ1][MQ1];
|
||||
MFEM_SHARED real_t sm0[3][MQ1 * MQ1 * MQ1];
|
||||
MFEM_SHARED real_t sm1[3][MQ1 * MQ1 * MQ1];
|
||||
real_t(*DDQ0)[MD1][MQ1] = (real_t(*)[MD1][MQ1])(sm0 + 0);
|
||||
real_t(*DDQ1)[MD1][MQ1] = (real_t(*)[MD1][MQ1])(sm0 + 1);
|
||||
real_t(*X)[MD1][MD1] = (real_t(*)[MD1][MD1])(sm0 + 2);
|
||||
real_t(*DQQ0)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm1 + 0);
|
||||
real_t(*DQQ1)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm1 + 1);
|
||||
real_t(*DQQ2)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm1 + 2);
|
||||
real_t(*QQQ0)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm0 + 0);
|
||||
real_t(*QQQ1)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm0 + 1);
|
||||
real_t(*QQQ2)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm0 + 2);
|
||||
real_t(*QQD0)[MQ1][MD1] = (real_t(*)[MQ1][MD1])(sm1 + 0);
|
||||
real_t(*QDD0)[MD1][MD1] = (real_t(*)[MD1][MD1])(sm0 + 0);
|
||||
MFEM_SHARED real_t Z[MQ1][MQ1][MQ1];
|
||||
|
||||
for (int cy = 0; cy < VDIM; ++cy)
|
||||
{
|
||||
if (tidz == 0)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(q, x, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(d, y, D1D)
|
||||
{
|
||||
B[q][d] = b(q, d);
|
||||
G[q][d] = g(q, d);
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_FOREACH_THREAD(qz, z, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, Q1D) { Z[qz][qy][qx] = 0.0; }
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
for (int c = 0; c < VDIM; ++c)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx, x, D1D)
|
||||
{
|
||||
X[dz][dy][dx] = x(dx, dy, dz, cy, e);
|
||||
U[0][dz][dy][dx] = x(dx, dy, dz, c, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, Q1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
real_t v = 0.0;
|
||||
real_t z = 0.0;
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t coord = X[dz][dy][dx];
|
||||
const real_t value = U[0][dz][dy][dx];
|
||||
u += coord * B[qx][dx];
|
||||
v += coord * G[qx][dx];
|
||||
z += value * B[qx][dx];
|
||||
}
|
||||
DDQ0[dz][dy][qx] = u;
|
||||
DDQ1[dz][dy][qx] = v;
|
||||
U[1][dz][dy][qx] = z;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, Q1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
real_t v = 0.0;
|
||||
real_t w = 0.0;
|
||||
real_t z = 0.0;
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
u += DDQ1[dz][dy][qx] * B[qy][dy];
|
||||
v += DDQ0[dz][dy][qx] * G[qy][dy];
|
||||
w += DDQ0[dz][dy][qx] * B[qy][dy];
|
||||
z += U[1][dz][dy][qx] * B[qy][dy];
|
||||
}
|
||||
DQQ0[dz][qy][qx] = u;
|
||||
DQQ1[dz][qy][qx] = v;
|
||||
DQQ2[dz][qy][qx] = w;
|
||||
U[0][dz][qy][qx] = z;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(qz, z, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, Q1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
real_t v = 0.0;
|
||||
real_t w = 0.0;
|
||||
real_t z = 0.0;
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
u += DQQ0[dz][qy][qx] * B[qz][dz];
|
||||
v += DQQ1[dz][qy][qx] * B[qz][dz];
|
||||
w += DQQ2[dz][qy][qx] * G[qz][dz];
|
||||
z += U[0][dz][qy][qx] * B[qz][dz];
|
||||
}
|
||||
QQQ0[qz][qy][qx] = u;
|
||||
QQQ1[qz][qy][qx] = v;
|
||||
QQQ2[qz][qy][qx] = w;
|
||||
U[1][qz][qy][qx] = z;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(qz, z, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, Q1D)
|
||||
{
|
||||
const int q = qx + (qy + qz * Q1D) * Q1D;
|
||||
const real_t z = U[1][qz][qy][qx];
|
||||
const real_t gX = QQQ0[qz][qy][qx];
|
||||
const real_t gY = QQQ1[qz][qy][qx];
|
||||
const real_t gZ = QQQ2[qz][qy][qx];
|
||||
const real_t d = gX * D(q, 0, c, e) + gY * D(q, 1, c, e)
|
||||
+ gZ * D(q, 2, c, e);
|
||||
Z[qz][qy][qx] += z * d;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
} // for each conv component
|
||||
if (tidz == 0)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(d, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(q, x, Q1D) { Bt[d][q] = b(q, d); }
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(qz, z, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx, x, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
u += Z[qz][qy][qx] * Bt[dx][qx];
|
||||
}
|
||||
QQD0[qz][qy][dx] = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(qz, z, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx, x, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
u += QQD0[qz][qy][dx] * Bt[dy][qy];
|
||||
}
|
||||
QDD0[qz][dy][dx] = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx, x, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
u += QDD0[qz][dy][dx] * Bt[dz][qz];
|
||||
}
|
||||
Y(dx, dy, dz, cy, e) += u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
}
|
||||
});
|
||||
MFEM_ABORT("dim " << dim << " not supported!");
|
||||
}
|
||||
}
|
||||
|
||||
void VectorConvectionNLFIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
@@ -812,26 +197,13 @@ void VectorConvectionNLFIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
}
|
||||
else
|
||||
{
|
||||
const int NE = ne;
|
||||
const int D1D = maps->ndof;
|
||||
const int Q1D = maps->nqpt;
|
||||
const Vector &QV = pa_data;
|
||||
const Array<real_t> &B = maps->B;
|
||||
const Array<real_t> &G = maps->G;
|
||||
const Array<real_t> &Bt = maps->Bt;
|
||||
if (dim == 2)
|
||||
{
|
||||
return PAConvectionNLApply2D(NE, B, G, Bt, QV, x, y, D1D, Q1D);
|
||||
}
|
||||
if (dim == 3)
|
||||
{
|
||||
constexpr int T_MAX_D1D = 8;
|
||||
constexpr int T_MAX_Q1D = 8;
|
||||
MFEM_VERIFY(D1D <= T_MAX_D1D && Q1D <= T_MAX_Q1D, "Not yet implemented!");
|
||||
return SmemPAConvectionNLApply3D<0, 0, T_MAX_D1D, T_MAX_Q1D>
|
||||
(NE, B, G, QV, x, y, D1D, Q1D);
|
||||
}
|
||||
MFEM_ABORT("Not yet implemented!");
|
||||
AddMultPAKernels::Run(dim, d1d, q1d, ne,
|
||||
maps->B.Read(),
|
||||
maps->G.Read(),
|
||||
pa_adj.Read(),
|
||||
x.Read(),
|
||||
y.ReadWrite(),
|
||||
d1d, q1d);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@@ -0,0 +1,209 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
#pragma once
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/dtensor.hpp"
|
||||
#include "../kernels.hpp"
|
||||
#include "../nonlininteg.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
|
||||
namespace internal
|
||||
{
|
||||
|
||||
// PA Convection NL 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLApply2D(const int NE,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *x,
|
||||
real_t *y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
static constexpr int VDIM = 2, DIM = 2;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto B = Reshape(b, Q1D, D1D);
|
||||
const auto G = Reshape(g, Q1D, D1D);
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, NE);
|
||||
const auto X = Reshape(x, D1D, D1D, VDIM, NE);
|
||||
auto Y = Reshape(y, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1], sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::vd_regs2d_t<VDIM, DIM, MQ1> g0, g1;
|
||||
kernels::internal::v_regs2d_t<VDIM, MQ1> r0, r1;
|
||||
kernels::internal::v_regs2d_t<VDIM, MQ1> s0, s1;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, G, sG);
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, X, r0);
|
||||
kernels::internal::Eval2d(D1D, Q1D, smem, sB, r0, r1); // u vector-value
|
||||
kernels::internal::LoadDofs2d(e, D1D, X, g0);
|
||||
kernels::internal::Grad2d(D1D, Q1D, smem, sB, sG, g0, g1); // u vector-gradient
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
const future::tensor<real_t, 2> U =
|
||||
{
|
||||
r1[0][qy][qx], r1[1][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, 2,2> gradU = {{
|
||||
{g1[0][0][qy][qx], g1[1][0][qy][qx]},
|
||||
{g1[0][1][qy][qx], g1[1][1][qy][qx]},
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, 2,2> Q = {{
|
||||
{A(0,0,qx,qy,e), A(1,0,qx,qy,e)},
|
||||
{A(0,1,qx,qy,e), A(1,1,qx,qy,e)},
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, 2> conv = transpose(gradU) * (Q * U);
|
||||
s0[0][qy][qx] = conv[0];
|
||||
s0[1][qy][qx] = conv[1];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
kernels::internal::EvalTranspose2d(D1D, Q1D, smem, sB, s0, s1);
|
||||
kernels::internal::WriteDofs2d(e, D1D, s1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
// PA Convection NL 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLApply3D(const int NE,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *x,
|
||||
real_t *y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
static constexpr int VDIM = 3, DIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto B = Reshape(b, Q1D, D1D);
|
||||
const auto G = Reshape(g, Q1D, D1D);
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, Q1D, NE);
|
||||
const auto X = Reshape(x, D1D, D1D, D1D, VDIM, NE);
|
||||
auto Y = Reshape(y, D1D, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D*T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1], sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::vd_regs3d_t<VDIM, DIM, MQ1> g0, g1;
|
||||
kernels::internal::v_regs3d_t<VDIM, MQ1> r0, r1;
|
||||
kernels::internal::v_regs3d_t<VDIM, MQ1> s0, s1;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, G, sG);
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, X, r0);
|
||||
kernels::internal::Eval3d(D1D, Q1D, smem, sB, r0, r1); // u vector-value
|
||||
kernels::internal::LoadDofs3d(e, D1D, X, g0);
|
||||
kernels::internal::Grad3d(D1D, Q1D, smem, sB, sG, g0, g1); // u vector-gradient
|
||||
|
||||
for (int qz = 0; qz < Q1D; qz++)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
const future::tensor<real_t, 3> U =
|
||||
{
|
||||
r1[0][qz][qy][qx], r1[1][qz][qy][qx], r1[2][qz][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, 3,3> gradU = {{
|
||||
{g1[0][0][qz][qy][qx], g1[1][0][qz][qy][qx], g1[2][0][qz][qy][qx]},
|
||||
{g1[0][1][qz][qy][qx], g1[1][1][qz][qy][qx], g1[2][1][qz][qy][qx]},
|
||||
{g1[0][2][qz][qy][qx], g1[1][2][qz][qy][qx], g1[2][2][qz][qy][qx]}
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, 3,3> Q = {{
|
||||
{A(0,0,qx,qy,qz,e), A(1,0,qx,qy,qz,e), A(2,0,qx,qy,qz,e)},
|
||||
{A(0,1,qx,qy,qz,e), A(1,1,qx,qy,qz,e), A(2,1,qx,qy,qz,e)},
|
||||
{A(0,2,qx,qy,qz,e), A(1,2,qx,qy,qz,e), A(2,2,qx,qy,qz,e)}
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, 3> conv = transpose(gradU) * (Q * U);
|
||||
s0[0][qz][qy][qx] = conv[0];
|
||||
s0[1][qz][qy][qx] = conv[1];
|
||||
s0[2][qz][qy][qx] = conv[2];
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
kernels::internal::EvalTranspose3d(D1D, Q1D, smem, sB, s0, s1);
|
||||
kernels::internal::WriteDofs3d(e, D1D, s1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
} // namespace internal
|
||||
|
||||
template<int DIM, int T_D1D, int T_Q1D>
|
||||
VectorConvectionNLFIntegrator::AddMultPAType
|
||||
VectorConvectionNLFIntegrator::AddMultPAKernels::Kernel()
|
||||
{
|
||||
static_assert(T_D1D <= T_Q1D, "d1d > q1d is not supported");
|
||||
if constexpr (DIM == 2)
|
||||
{
|
||||
return internal::SmemPAConvectionNLApply2D<T_D1D, T_Q1D>;
|
||||
}
|
||||
else if constexpr (DIM == 3)
|
||||
{
|
||||
return internal::SmemPAConvectionNLApply3D<T_D1D, T_Q1D>;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
inline VectorConvectionNLFIntegrator::AddMultPAType
|
||||
VectorConvectionNLFIntegrator::AddMultPAKernels::Fallback
|
||||
(int dim, int d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= q1d, "d1d > q1d is not supported");
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
if (dim == 2)
|
||||
{
|
||||
return internal::SmemPAConvectionNLApply2D<>;
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
return internal::SmemPAConvectionNLApply3D<>;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
} // namespace mfem
|
||||
@@ -0,0 +1,50 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "../ceed/interface/util.hpp"
|
||||
#include "./nonlininteg_vecconvection_pa_diag.hpp" // IWYU pragma: keep
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
void VectorConvectionNLFIntegrator::AssembleGradDiagonalPA(Vector &de) const
|
||||
{
|
||||
MFEM_VERIFY(!DeviceCanUseCeed(),
|
||||
"VectorConvectionNLFIntegrator PA gradients are not supported "
|
||||
"with the libCEED backend");
|
||||
|
||||
if (dim == 2)
|
||||
{
|
||||
GradDiagPA2D::Run(d1d, q1d, ne,
|
||||
maps->B.Read(),
|
||||
maps->G.Read(),
|
||||
pa_adj.Read(),
|
||||
pa_u.Read(),
|
||||
de.ReadWrite(),
|
||||
d1d, q1d);
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
GradDiagPA3D::Run(d1d, q1d, ne,
|
||||
maps->B.Read(),
|
||||
maps->G.Read(),
|
||||
pa_adj.Read(),
|
||||
pa_u.Read(),
|
||||
de.ReadWrite(),
|
||||
d1d, q1d);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unsupported dimension");
|
||||
}
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
@@ -0,0 +1,302 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
#pragma once
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/dtensor.hpp"
|
||||
#include "../kernels.hpp"
|
||||
#include "../nonlininteg.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
|
||||
namespace internal
|
||||
{
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLGradDiagonal2D(const int NE,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *u,
|
||||
real_t *de,
|
||||
const int d1d,
|
||||
const int q1d)
|
||||
{
|
||||
static constexpr int VDIM = 2, DIM = 2;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, NE);
|
||||
const auto U = Reshape(u, D1D, D1D, VDIM, NE);
|
||||
auto D = Reshape(de, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t sM[3][MQ1][MQ1], sQ[3][MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::v_regs2d_t<VDIM, MQ1> r0, r1;
|
||||
kernels::internal::vd_regs2d_t<VDIM, DIM, MQ1> g0, g1;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, b, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, g, sG);
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, U, r0);
|
||||
kernels::internal::Eval2d(D1D, Q1D, sM[0], sB, r0, r1);
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, U, g0);
|
||||
kernels::internal::Grad2d(D1D, Q1D, sM[0], sB, sG, g0, g1);
|
||||
|
||||
for (int v = 0; v < VDIM; ++v)
|
||||
{
|
||||
future::tensor<real_t, VDIM> e_v = {};
|
||||
e_v[v] = real_t(1);
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
const future::tensor<real_t, VDIM> u_val =
|
||||
{
|
||||
r1[0][qy][qx], r1[1][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> Q_adj =
|
||||
{
|
||||
{ { A(0, 0, qx, qy, e), A(1, 0, qx, qy, e) },
|
||||
{ A(0, 1, qx, qy, e), A(1, 1, qx, qy, e) }
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> grad_U =
|
||||
{
|
||||
{ { g1[0][0][qy][qx], g1[1][0][qy][qx] },
|
||||
{ g1[0][1][qy][qx], g1[1][1][qy][qx] }
|
||||
}
|
||||
};
|
||||
const auto one = Q_adj * u_val;
|
||||
const auto two = transpose(grad_U) * (Q_adj * e_v);
|
||||
sQ[0][qx][qy] = one[0];
|
||||
sQ[1][qx][qy] = one[1];
|
||||
sQ[2][qx][qy] = two[v];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
real_t s[3] = {};
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
const real_t By = sB[dy][qy], Gy = sG[dy][qy];
|
||||
s[0] += By * By * sQ[0][qx][qy];
|
||||
s[1] += Gy * By * sQ[1][qx][qy];
|
||||
s[2] += By * By * sQ[2][qx][qy];
|
||||
}
|
||||
sM[0][qx][dy] = s[0];
|
||||
sM[1][qx][dy] = s[1];
|
||||
sM[2][qx][dy] = s[2];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dx, x, D1D)
|
||||
{
|
||||
real_t d = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Bx = sB[dx][qx], Gx = sG[dx][qx];
|
||||
d += Gx * Bx * sM[0][qx][dy] +
|
||||
Bx * Bx * sM[1][qx][dy] +
|
||||
Bx * Bx * sM[2][qx][dy];
|
||||
}
|
||||
D(dx, dy, v, e) += d;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLGradDiagonal3D(const int NE,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *u,
|
||||
real_t *de,
|
||||
const int d1d,
|
||||
const int q1d)
|
||||
{
|
||||
static constexpr int VDIM = 3, DIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, Q1D, NE);
|
||||
const auto U = Reshape(u, D1D, D1D, D1D, VDIM, NE);
|
||||
auto D = Reshape(de, D1D, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t sM[4][MQ1][MQ1], sQ[4][MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::v_regs3d_t<VDIM, MQ1> r0, r1;
|
||||
kernels::internal::vd_regs3d_t<VDIM, DIM, MQ1> g0, g1;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, b, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, g, sG);
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, U, r0);
|
||||
kernels::internal::Eval3d(D1D, Q1D, sM[0], sB, r0, r1);
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, U, g0);
|
||||
kernels::internal::Grad3d(D1D, Q1D, sM[0], sB, sG, g0, g1);
|
||||
|
||||
for (int v = 0; v < VDIM; ++v)
|
||||
{
|
||||
future::tensor<real_t, VDIM> e_v = {};
|
||||
e_v[v] = real_t(1);
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
real_t s[4] = {};
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
const future::tensor<real_t, VDIM> u_val =
|
||||
{
|
||||
r1[0][qz][qy][qx], r1[1][qz][qy][qx], r1[2][qz][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> Q_adj = {{
|
||||
{A(0,0,qx,qy,qz,e), A(1,0,qx,qy,qz,e), A(2,0,qx,qy,qz,e)},
|
||||
{A(0,1,qx,qy,qz,e), A(1,1,qx,qy,qz,e), A(2,1,qx,qy,qz,e)},
|
||||
{A(0,2,qx,qy,qz,e), A(1,2,qx,qy,qz,e), A(2,2,qx,qy,qz,e)}
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> grad_U = {{
|
||||
{g1[0][0][qz][qy][qx], g1[1][0][qz][qy][qx], g1[2][0][qz][qy][qx]},
|
||||
{g1[0][1][qz][qy][qx], g1[1][1][qz][qy][qx], g1[2][1][qz][qy][qx]},
|
||||
{g1[0][2][qz][qy][qx], g1[1][2][qz][qy][qx], g1[2][2][qz][qy][qx]}
|
||||
}
|
||||
};
|
||||
const auto one = Q_adj * u_val;
|
||||
const auto two = transpose(grad_U) * (Q_adj * e_v);
|
||||
|
||||
const real_t Bz = sB[dz][qz], Gz = sG[dz][qz];
|
||||
s[0] += one[0] * Bz * Bz;
|
||||
s[1] += one[1] * Bz * Bz;
|
||||
s[2] += one[2] * Bz * Gz;
|
||||
s[3] += two[v] * Bz * Bz;
|
||||
}
|
||||
sQ[0][qx][qy] = s[0];
|
||||
sQ[1][qx][qy] = s[1];
|
||||
sQ[2][qx][qy] = s[2];
|
||||
sQ[3][qx][qy] = s[3];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
real_t s[4] = {};
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
const real_t By = sB[dy][qy], Gy = sG[dy][qy];
|
||||
s[0] += By * By * sQ[0][qx][qy];
|
||||
s[1] += Gy * By * sQ[1][qx][qy];
|
||||
s[2] += By * By * sQ[2][qx][qy];
|
||||
s[3] += By * By * sQ[3][qx][qy];
|
||||
}
|
||||
sM[0][dy][qx] = s[0];
|
||||
sM[1][dy][qx] = s[1];
|
||||
sM[2][dy][qx] = s[2];
|
||||
sM[3][dy][qx] = s[3];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dx, x, D1D)
|
||||
{
|
||||
real_t d = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Bx = sB[dx][qx], Gx = sG[dx][qx];
|
||||
d += Gx * Bx * sM[0][dy][qx];
|
||||
d += Bx * Bx * sM[1][dy][qx];
|
||||
d += Bx * Bx * sM[2][dy][qx];
|
||||
d += Bx * Bx * sM[3][dy][qx];
|
||||
}
|
||||
D(dx, dy, dz, v, e) += d;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
} // namespace internal
|
||||
|
||||
template<int T_D1D, int T_Q1D>
|
||||
VectorConvectionNLFIntegrator::GradDiagPAType
|
||||
VectorConvectionNLFIntegrator::GradDiagPA2D::Kernel()
|
||||
{
|
||||
static_assert(T_D1D <= T_Q1D, "d1d > q1d is not supported");
|
||||
return internal::SmemPAConvectionNLGradDiagonal2D<T_D1D, T_Q1D>;
|
||||
}
|
||||
|
||||
inline VectorConvectionNLFIntegrator::GradDiagPAType
|
||||
VectorConvectionNLFIntegrator::GradDiagPA2D::Fallback(int d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= q1d, "d1d > q1d is not supported");
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
return internal::SmemPAConvectionNLGradDiagonal2D<>;
|
||||
}
|
||||
|
||||
template<int T_D1D, int T_Q1D>
|
||||
VectorConvectionNLFIntegrator::GradDiagPAType
|
||||
VectorConvectionNLFIntegrator::GradDiagPA3D::Kernel()
|
||||
{
|
||||
static_assert(T_D1D <= T_Q1D, "d1d > q1d is not supported");
|
||||
return internal::SmemPAConvectionNLGradDiagonal3D<T_D1D, T_Q1D>;
|
||||
}
|
||||
|
||||
inline VectorConvectionNLFIntegrator::GradDiagPAType
|
||||
VectorConvectionNLFIntegrator::GradDiagPA3D::Fallback(int d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= q1d, "d1d > q1d is not supported");
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
return internal::SmemPAConvectionNLGradDiagonal3D<>;
|
||||
}
|
||||
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
} // namespace mfem
|
||||
@@ -0,0 +1,64 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "../ceed/interface/util.hpp"
|
||||
#include "./nonlininteg_vecconvection_pa_grad.hpp" // IWYU pragma: keep
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
void VectorConvectionNLFIntegrator::AssembleGradPA(
|
||||
const Vector &u, const FiniteElementSpace &fes)
|
||||
{
|
||||
MFEM_VERIFY(!DeviceCanUseCeed(),
|
||||
"VectorConvectionNLFIntegrator PA gradients are not supported "
|
||||
"with the libCEED backend");
|
||||
|
||||
this->pa_u = u;
|
||||
AssemblePA(fes);
|
||||
}
|
||||
|
||||
void VectorConvectionNLFIntegrator::AddMultGradPA(const Vector &x,
|
||||
Vector &y) const
|
||||
{
|
||||
MFEM_VERIFY(!DeviceCanUseCeed(),
|
||||
"VectorConvectionNLFIntegrator PA gradients are not supported "
|
||||
"with the libCEED backend");
|
||||
|
||||
if (dim == 2)
|
||||
{
|
||||
AddMultGradPA2D::Run(d1d, q1d, ne,
|
||||
maps->B.Read(),
|
||||
maps->G.Read(),
|
||||
pa_adj.Read(),
|
||||
pa_u.Read(),
|
||||
x.Read(),
|
||||
y.ReadWrite(),
|
||||
d1d, q1d);
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
AddMultGradPA3D::Run(d1d, q1d, ne,
|
||||
maps->B.Read(),
|
||||
maps->G.Read(),
|
||||
pa_adj.Read(),
|
||||
pa_u.Read(),
|
||||
x.Read(),
|
||||
y.ReadWrite(),
|
||||
d1d, q1d);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unsupported dimension");
|
||||
}
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
@@ -0,0 +1,257 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
#pragma once
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/dtensor.hpp"
|
||||
#include "../kernels.hpp"
|
||||
#include "../nonlininteg.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
|
||||
namespace internal
|
||||
{
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLGradApply2D(const int ne,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *u,
|
||||
const real_t *du,
|
||||
real_t *y,
|
||||
const int d1d,
|
||||
const int q1d)
|
||||
{
|
||||
static constexpr int VDIM = 2, DIM = 2;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, ne);
|
||||
const auto U = Reshape(u, D1D, D1D, VDIM, ne);
|
||||
const auto dU = Reshape(du, D1D, D1D, VDIM, ne);
|
||||
auto Y = Reshape(y, D1D, D1D, VDIM, ne);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(ne, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::vd_regs2d_t<VDIM, DIM, MQ1> g0, g1, g2;
|
||||
kernels::internal::v_regs2d_t<DIM, MQ1> r0, r1, r2;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, b, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, g, sG);
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, dU, g0);
|
||||
kernels::internal::Grad2d(D1D, Q1D, smem, sB, sG, g0, g1); // δu gradient
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, U, r0);
|
||||
kernels::internal::Eval2d(D1D, Q1D, smem, sB, r0, r2); // u value
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, dU, r0);
|
||||
kernels::internal::Eval2d(D1D, Q1D, smem, sB, r0, r1); // δu value
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, U, g0);
|
||||
kernels::internal::Grad2d(D1D, Q1D, smem, sB, sG, g0, g2); // u gradient
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
// First part of the Jacobian: u·∇δu
|
||||
const future::tensor<real_t, DIM> u_val =
|
||||
{
|
||||
r2[0][qy][qx], r2[1][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> Q_adj =
|
||||
{
|
||||
{ { A(0, 0, qx, qy, e), A(1, 0, qx, qy, e) },
|
||||
{ A(0, 1, qx, qy, e), A(1, 1, qx, qy, e) }
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> grad_dU =
|
||||
{
|
||||
{ { g1[0][0][qy][qx], g1[1][0][qy][qx] },
|
||||
{ g1[0][1][qy][qx], g1[1][1][qy][qx] }
|
||||
}
|
||||
};
|
||||
const auto one = transpose(grad_dU) * (Q_adj * u_val);
|
||||
|
||||
// Second part of the Jacobian: δu·∇u
|
||||
const future::tensor<real_t, DIM> du_val =
|
||||
{
|
||||
r1[0][qy][qx], r1[1][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> grad_U =
|
||||
{
|
||||
{ { g2[0][0][qy][qx], g2[1][0][qy][qx] },
|
||||
{ g2[0][1][qy][qx], g2[1][1][qy][qx] }
|
||||
}
|
||||
};
|
||||
const auto two = transpose(grad_U) * (Q_adj * du_val);
|
||||
|
||||
// u⋅∇δu + δu⋅∇u
|
||||
r0[0][qy][qx] = one[0] + two[0];
|
||||
r0[1][qy][qx] = one[1] + two[1];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
kernels::internal::EvalTranspose2d(D1D, Q1D, smem, sB, r0, r1);
|
||||
kernels::internal::WriteDofs2d(e, D1D, r1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLGradApply3D(const int ne,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *u,
|
||||
const real_t *du,
|
||||
real_t *y,
|
||||
const int d1d,
|
||||
const int q1d)
|
||||
{
|
||||
static constexpr int VDIM = 3, DIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, Q1D, ne);
|
||||
const auto U = Reshape(u, D1D, D1D, D1D, VDIM, ne);
|
||||
const auto dU = Reshape(du, D1D, D1D, D1D, VDIM, ne);
|
||||
auto Y = Reshape(y, D1D, D1D, D1D, VDIM, ne);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(ne, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::v_regs3d_t<VDIM, MQ1> r0, r1, r2;
|
||||
kernels::internal::vd_regs3d_t<VDIM, DIM, MQ1> g0, g1, g2;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, b, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, g, sG);
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, dU, g0);
|
||||
kernels::internal::Grad3d(D1D, Q1D, smem, sB, sG, g0, g1); // δu gradient
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, U, r0);
|
||||
kernels::internal::Eval3d(D1D, Q1D, smem, sB, r0, r2); // u value
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, dU, r0);
|
||||
kernels::internal::Eval3d(D1D, Q1D, smem, sB, r0, r1); // δu value
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, U, g0);
|
||||
kernels::internal::Grad3d(D1D, Q1D, smem, sB, sG, g0, g2); // u gradient
|
||||
|
||||
for (int qz = 0; qz < Q1D; qz++)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
// First part of the Jacobian: u·∇δu
|
||||
const future::tensor<real_t, DIM> u_val =
|
||||
{
|
||||
r2[0][qz][qy][qx],
|
||||
r2[1][qz][qy][qx],
|
||||
r2[2][qz][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> Q_adj = {{
|
||||
{A(0,0,qx,qy,qz,e), A(1,0,qx,qy,qz,e), A(2,0,qx,qy,qz,e)},
|
||||
{A(0,1,qx,qy,qz,e), A(1,1,qx,qy,qz,e), A(2,1,qx,qy,qz,e)},
|
||||
{A(0,2,qx,qy,qz,e), A(1,2,qx,qy,qz,e), A(2,2,qx,qy,qz,e)}
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, DIM, DIM> grad_dU = {{
|
||||
{g1[0][0][qz][qy][qx], g1[1][0][qz][qy][qx], g1[2][0][qz][qy][qx]},
|
||||
{g1[0][1][qz][qy][qx], g1[1][1][qz][qy][qx], g1[2][1][qz][qy][qx]},
|
||||
{g1[0][2][qz][qy][qx], g1[1][2][qz][qy][qx], g1[2][2][qz][qy][qx]}
|
||||
}
|
||||
};
|
||||
const auto one = transpose(grad_dU) * (Q_adj * u_val);
|
||||
|
||||
// Second part of the Jacobian: δu·∇u
|
||||
const future::tensor<real_t, DIM> du_val =
|
||||
{
|
||||
r1[0][qz][qy][qx], r1[1][qz][qy][qx], r1[2][qz][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> grad_U = {{
|
||||
{g2[0][0][qz][qy][qx], g2[1][0][qz][qy][qx], g2[2][0][qz][qy][qx]},
|
||||
{g2[0][1][qz][qy][qx], g2[1][1][qz][qy][qx], g2[2][1][qz][qy][qx]},
|
||||
{g2[0][2][qz][qy][qx], g2[1][2][qz][qy][qx], g2[2][2][qz][qy][qx]}
|
||||
}
|
||||
};
|
||||
const auto two = transpose(grad_U) * (Q_adj * du_val);
|
||||
|
||||
// u⋅∇δu + δu⋅∇u
|
||||
r0[0][qz][qy][qx] = one[0] + two[0];
|
||||
r0[1][qz][qy][qx] = one[1] + two[1];
|
||||
r0[2][qz][qy][qx] = one[2] + two[2];
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
kernels::internal::EvalTranspose3d(D1D, Q1D, smem, sB, r0, r1);
|
||||
kernels::internal::WriteDofs3d(e, D1D, r1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
} // namespace internal
|
||||
|
||||
template<int T_D1D, int T_Q1D>
|
||||
VectorConvectionNLFIntegrator::AddMultGradPAType
|
||||
VectorConvectionNLFIntegrator::AddMultGradPA2D::Kernel()
|
||||
{
|
||||
static_assert(T_D1D <= T_Q1D, "d1d > q1d is not supported");
|
||||
return internal::SmemPAConvectionNLGradApply2D<T_D1D, T_Q1D>;
|
||||
}
|
||||
|
||||
inline VectorConvectionNLFIntegrator::AddMultGradPAType
|
||||
VectorConvectionNLFIntegrator::AddMultGradPA2D::Fallback(int d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= q1d, "d1d > q1d is not supported");
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
return internal::SmemPAConvectionNLGradApply2D<>;
|
||||
}
|
||||
|
||||
template<int T_D1D, int T_Q1D>
|
||||
VectorConvectionNLFIntegrator::AddMultGradPAType
|
||||
VectorConvectionNLFIntegrator::AddMultGradPA3D::Kernel()
|
||||
{
|
||||
static_assert(T_D1D <= T_Q1D, "d1d > q1d is not supported");
|
||||
return internal::SmemPAConvectionNLGradApply3D<T_D1D, T_Q1D>;
|
||||
}
|
||||
|
||||
inline VectorConvectionNLFIntegrator::AddMultGradPAType
|
||||
VectorConvectionNLFIntegrator::AddMultGradPA3D::Fallback(int d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= q1d, "d1d > q1d is not supported");
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
return internal::SmemPAConvectionNLGradApply3D<>;
|
||||
}
|
||||
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
} // namespace mfem
|
||||
+4
-8
@@ -542,7 +542,10 @@ void QuadratureFunctions1D::GaussJacobi(const int np, const real_t alpha,
|
||||
return;
|
||||
}
|
||||
|
||||
#ifndef MFEM_USE_MPFR
|
||||
#ifdef MFEM_USE_MPFR
|
||||
MFEM_WARNING("MPFR implementation of Gauss-Jacobi quadrature not implemented yet. Falling "
|
||||
"back to double precision implementation...");
|
||||
#endif
|
||||
|
||||
const int n = np;
|
||||
// common constants for Jacobi polynomials
|
||||
@@ -611,13 +614,6 @@ void QuadratureFunctions1D::GaussJacobi(const int np, const real_t alpha,
|
||||
ab + 1) / ((1.0 - xi*xi)*pp*pp) / pow(2, ab);
|
||||
// map nodes and weights to the interval [0,1]
|
||||
}
|
||||
|
||||
#else // MFEM_USE_MPFR is defined
|
||||
|
||||
MFEM_ABORT("MPFR implementation of Gauss-Jacobi quadrature not defined yet");
|
||||
|
||||
#endif // MFEM_USE_MPFR
|
||||
|
||||
}
|
||||
|
||||
|
||||
|
||||
+9
-2
@@ -83,7 +83,7 @@ constexpr int SetMaxOf(int n) { return NextMultipleOf<4>(n); }
|
||||
#endif // CUDA/HIP && DEVICE_COMPILE
|
||||
|
||||
/// Load 2D matrix into shared memory
|
||||
template <int MQ1>
|
||||
template <int MQ1, bool TRANSPOSE = false>
|
||||
inline MFEM_HOST_DEVICE void LoadMatrix(const int d1d, const int q1d,
|
||||
const real_t *M, real_t (*N)[MQ1])
|
||||
{
|
||||
@@ -91,7 +91,14 @@ inline MFEM_HOST_DEVICE void LoadMatrix(const int d1d, const int q1d,
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, q1d)
|
||||
{
|
||||
N[dy][qx] = M[dy * q1d + qx];
|
||||
if constexpr (TRANSPOSE)
|
||||
{
|
||||
N[dy][qx] = M[qx * d1d + dy];
|
||||
}
|
||||
else
|
||||
{
|
||||
N[dy][qx] = M[dy * q1d + qx];
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
+4
-4
@@ -94,10 +94,10 @@ void BatchedLOR_AMS::Form2DEdgeToVertex_RT(Array<int> &edge2vert)
|
||||
const int iv0 = ix + iy*op1;
|
||||
const int iv1 = ix1 + iy1*op1;
|
||||
|
||||
// Rotated gradient in 2D (-dy, dx), so flip the sign for the first
|
||||
// component (c == 0).
|
||||
e2v(0, iedge) = (c == 1) ? iv0 : iv1;
|
||||
e2v(1, iedge) = (c == 1) ? iv1 : iv0;
|
||||
// 2D curl (dy, -dx), so flip the sign for the second
|
||||
// component (c == 1).
|
||||
e2v(0, iedge) = (c == 0) ? iv0 : iv1;
|
||||
e2v(1, iedge) = (c == 0) ? iv1 : iv0;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
+12
-9
@@ -142,8 +142,6 @@ static MFEM_HOST_DEVICE int GetAndIncrementNnzIndex(const int i_L, int* I)
|
||||
|
||||
int BatchedLORAssembly::FillI(SparseMatrix &A) const
|
||||
{
|
||||
static constexpr int Max = 16;
|
||||
|
||||
const int nvdof = fes_ho.GetVSize();
|
||||
|
||||
const int ndof_per_el = fes_ho.GetTypicalFE()->GetDof();
|
||||
@@ -165,6 +163,8 @@ int BatchedLORAssembly::FillI(SparseMatrix &A) const
|
||||
const auto K = dof_glob2loc_offsets_.Read();
|
||||
const auto map = Reshape(sparse_mapping.Read(), nnz_per_row, ndof_per_el);
|
||||
|
||||
Array<int> ij_elts(dof_glob2loc_.Size() * 2);
|
||||
auto d_ij_elts = Reshape(ij_elts.Write(), dof_glob2loc_.Size(), 2);
|
||||
|
||||
auto I = A.WriteI();
|
||||
|
||||
@@ -176,10 +176,10 @@ int BatchedLORAssembly::FillI(SparseMatrix &A) const
|
||||
const int sii = el_dof_lex(ii_el, iel_ho);
|
||||
const int ii = (sii >= 0) ? sii : -1 -sii;
|
||||
// Get number and list of elements containing this DOF
|
||||
int i_elts[Max];
|
||||
const int i_offset = K[ii];
|
||||
const int i_next_offset = K[ii+1];
|
||||
const int i_ne = i_next_offset - i_offset;
|
||||
int *i_elts = &d_ij_elts(i_offset, 0);
|
||||
for (int e_i = 0; e_i < i_ne; ++e_i)
|
||||
{
|
||||
const int si_E = dof_glob2loc[i_offset+e_i]; // signed
|
||||
@@ -202,7 +202,7 @@ int BatchedLORAssembly::FillI(SparseMatrix &A) const
|
||||
}
|
||||
else // assembly required
|
||||
{
|
||||
int j_elts[Max];
|
||||
int *j_elts = &d_ij_elts(j_offset, 1);
|
||||
for (int e_j = 0; e_j < j_ne; ++e_j)
|
||||
{
|
||||
const int sj_E = dof_glob2loc[j_offset+e_j]; // signed
|
||||
@@ -269,7 +269,8 @@ void BatchedLORAssembly::FillJAndData(SparseMatrix &A) const
|
||||
mfem::forall(nvdof + 1, [=] MFEM_HOST_DEVICE (int i) { I[i] = I2[i]; });
|
||||
}
|
||||
|
||||
static constexpr int Max = 16;
|
||||
Array<int> ij_B_el(dof_glob2loc_.Size() * 4);
|
||||
auto d_ij_B_el = Reshape(ij_B_el.Write(), dof_glob2loc_.Size(), 4);
|
||||
|
||||
mfem::forall(ndof_per_el*nel_ho, [=] MFEM_HOST_DEVICE (int i)
|
||||
{
|
||||
@@ -279,11 +280,13 @@ void BatchedLORAssembly::FillJAndData(SparseMatrix &A) const
|
||||
const int sii = el_dof_lex(ii_el, iel_ho); // signed
|
||||
const int ii = (sii >= 0) ? sii : -1 - sii;
|
||||
// Get number and list of elements containing this DOF
|
||||
int i_elts[Max];
|
||||
int i_B[Max];
|
||||
const int i_offset = K[ii];
|
||||
const int i_next_offset = K[ii+1];
|
||||
const int i_ne = i_next_offset - i_offset;
|
||||
|
||||
int *i_elts = &d_ij_B_el(i_offset, 0);
|
||||
int *i_B = &d_ij_B_el(i_offset, 1);
|
||||
|
||||
for (int e_i = 0; e_i < i_ne; ++e_i)
|
||||
{
|
||||
const int si_E = dof_glob2loc[i_offset+e_i]; // signed
|
||||
@@ -312,8 +315,8 @@ void BatchedLORAssembly::FillJAndData(SparseMatrix &A) const
|
||||
}
|
||||
else // assembly required
|
||||
{
|
||||
int j_elts[Max];
|
||||
int j_B[Max];
|
||||
int *j_elts = &d_ij_B_el(j_offset, 2);
|
||||
int *j_B = &d_ij_B_el(j_offset, 3);
|
||||
for (int e_j = 0; e_j < j_ne; ++e_j)
|
||||
{
|
||||
const int sj_E = dof_glob2loc[j_offset+e_j]; // signed
|
||||
|
||||
@@ -100,6 +100,17 @@ PANonlinearFormExtension::Gradient::Gradient(const PANonlinearFormExtension &e):
|
||||
|
||||
void PANonlinearFormExtension::Gradient::AssembleGrad(const Vector &g)
|
||||
{
|
||||
if (DeviceCanUseCeed())
|
||||
{
|
||||
for (int i = 0; i < ext.dnfi.Size(); ++i)
|
||||
{
|
||||
MFEM_VERIFY(dynamic_cast<VectorConvectionNLFIntegrator *>
|
||||
(ext.dnfi[i]) == nullptr,
|
||||
"VectorConvectionNLFIntegrator PA gradients are not supported "
|
||||
"with the libCEED backend");
|
||||
}
|
||||
}
|
||||
|
||||
ext.elemR->Mult(g, ext.xe);
|
||||
for (int i = 0; i < ext.dnfi.Size(); ++i)
|
||||
{
|
||||
|
||||
@@ -954,4 +954,74 @@ void SkewSymmetricVectorConvectionNLFIntegrator::AssembleElementGrad(
|
||||
}
|
||||
}
|
||||
|
||||
void ConvectiveVectorConvectionNLFIntegrator::AssemblePA(
|
||||
const FiniteElementSpace &)
|
||||
{
|
||||
MFEM_ABORT("ConvectiveVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void ConvectiveVectorConvectionNLFIntegrator::AssembleGradPA(
|
||||
const Vector &, const FiniteElementSpace &)
|
||||
{
|
||||
MFEM_ABORT("ConvectiveVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void ConvectiveVectorConvectionNLFIntegrator::AddMultPA(
|
||||
const Vector &, Vector &) const
|
||||
{
|
||||
MFEM_ABORT("ConvectiveVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void ConvectiveVectorConvectionNLFIntegrator::AddMultGradPA(
|
||||
const Vector &, Vector &) const
|
||||
{
|
||||
MFEM_ABORT("ConvectiveVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void ConvectiveVectorConvectionNLFIntegrator::AssembleGradDiagonalPA(
|
||||
Vector &) const
|
||||
{
|
||||
MFEM_ABORT("ConvectiveVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void SkewSymmetricVectorConvectionNLFIntegrator::AssemblePA(
|
||||
const FiniteElementSpace &)
|
||||
{
|
||||
MFEM_ABORT("SkewSymmetricVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void SkewSymmetricVectorConvectionNLFIntegrator::AssembleGradPA(
|
||||
const Vector &, const FiniteElementSpace &)
|
||||
{
|
||||
MFEM_ABORT("SkewSymmetricVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void SkewSymmetricVectorConvectionNLFIntegrator::AddMultPA(
|
||||
const Vector &, Vector &) const
|
||||
{
|
||||
MFEM_ABORT("SkewSymmetricVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void SkewSymmetricVectorConvectionNLFIntegrator::AddMultGradPA(
|
||||
const Vector &, Vector &) const
|
||||
{
|
||||
MFEM_ABORT("SkewSymmetricVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void SkewSymmetricVectorConvectionNLFIntegrator::AssembleGradDiagonalPA(
|
||||
Vector &) const
|
||||
{
|
||||
MFEM_ABORT("SkewSymmetricVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
+70
-8
@@ -18,6 +18,7 @@
|
||||
#include "fespace.hpp"
|
||||
#include "ceed/interface/operator.hpp"
|
||||
#include "integrator.hpp"
|
||||
#include "kernel_dispatch.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
@@ -384,15 +385,17 @@ private:
|
||||
DenseMatrix dshape, dshapex, EF, gradEF, ELV, elmat_comp;
|
||||
Vector shape;
|
||||
// PA extension
|
||||
Vector pa_data;
|
||||
int dim, ne, nq, d1d, q1d;
|
||||
Vector pa_adj, pa_u;
|
||||
const DofToQuad *maps; ///< Not owned
|
||||
const GeometricFactors *geom; ///< Not owned
|
||||
int dim, ne, nq;
|
||||
|
||||
public:
|
||||
VectorConvectionNLFIntegrator(Coefficient &q): Q(&q) { }
|
||||
struct Kernels { Kernels(); };
|
||||
|
||||
VectorConvectionNLFIntegrator() = default;
|
||||
VectorConvectionNLFIntegrator(Coefficient &q): Q(&q) { static Kernels kernels; }
|
||||
|
||||
VectorConvectionNLFIntegrator() { static Kernels kernels; }
|
||||
|
||||
static const IntegrationRule &GetRule(const FiniteElement &fe,
|
||||
const ElementTransformation &T);
|
||||
@@ -411,12 +414,55 @@ public:
|
||||
|
||||
void AssemblePA(const FiniteElementSpace &fes) override;
|
||||
|
||||
void AssembleMF(const FiniteElementSpace &fes) override;
|
||||
void AssembleGradPA(const Vector &x, const FiniteElementSpace &fes) override;
|
||||
|
||||
void AddMultPA(const Vector &x, Vector &y) const override;
|
||||
|
||||
void AddMultMF(const Vector &x, Vector &y) const override;
|
||||
using AddMultPAType =
|
||||
void(*)(const int ne, const real_t *B, const real_t *G, const real_t *A,
|
||||
const real_t *x, real_t *y,
|
||||
const int d1d, const int q1d);
|
||||
MFEM_REGISTER_KERNELS(AddMultPAKernels, AddMultPAType, (int, int, int));
|
||||
|
||||
void AddMultGradPA(const Vector &x, Vector &y) const override;
|
||||
|
||||
using AddMultGradPAType =
|
||||
void(*)(const int ne, const real_t *B, const real_t *G, const real_t *A,
|
||||
const real_t *u, const real_t *x, real_t *y,
|
||||
const int d1d, const int q1d);
|
||||
|
||||
MFEM_REGISTER_KERNELS(AddMultGradPA2D, AddMultGradPAType, (int, int));
|
||||
MFEM_REGISTER_KERNELS(AddMultGradPA3D, AddMultGradPAType, (int, int));
|
||||
|
||||
void AssembleGradDiagonalPA(Vector &) const override;
|
||||
|
||||
using GradDiagPAType =
|
||||
void (*)(const int ne, const real_t *B, const real_t *G, const real_t *A,
|
||||
const real_t *u, real_t *y,
|
||||
const int d1d, const int q1d);
|
||||
|
||||
MFEM_REGISTER_KERNELS(GradDiagPA2D, GradDiagPAType, (int, int));
|
||||
MFEM_REGISTER_KERNELS(GradDiagPA3D, GradDiagPAType, (int, int));
|
||||
|
||||
template <int DIM, int D1D, int Q1D>
|
||||
static void AddSpecialization()
|
||||
{
|
||||
AddMultPAKernels::Specialization<DIM, D1D, Q1D>::Add();
|
||||
if constexpr (DIM == 2)
|
||||
{
|
||||
AddMultGradPA2D::Specialization<D1D, Q1D>::Add();
|
||||
GradDiagPA2D::Specialization<D1D, Q1D>::Add();
|
||||
}
|
||||
else if constexpr (DIM == 3)
|
||||
{
|
||||
AddMultGradPA3D::Specialization<D1D, Q1D>::Add();
|
||||
GradDiagPA3D::Specialization<D1D, Q1D>::Add();
|
||||
}
|
||||
}
|
||||
|
||||
void AssembleMF(const FiniteElementSpace &fes) override;
|
||||
|
||||
void AddMultMF(const Vector &x, Vector &y) const override;
|
||||
|
||||
protected:
|
||||
const IntegrationRule* GetDefaultIntegrationRule(
|
||||
@@ -430,7 +476,8 @@ protected:
|
||||
|
||||
|
||||
/** This class is used to assemble the convective form of the nonlinear term
|
||||
arising in the Navier-Stokes equations $(u \cdot \nabla v, w )$ */
|
||||
arising in the Navier-Stokes equations $(u \cdot \nabla v, w )$.
|
||||
Partial assembly is not supported; use VectorConvectionNLFIntegrator. */
|
||||
class ConvectiveVectorConvectionNLFIntegrator :
|
||||
public VectorConvectionNLFIntegrator
|
||||
{
|
||||
@@ -448,12 +495,20 @@ public:
|
||||
ElementTransformation &trans,
|
||||
const Vector &elfun,
|
||||
DenseMatrix &elmat) override;
|
||||
|
||||
using NonlinearFormIntegrator::AssemblePA;
|
||||
void AssemblePA(const FiniteElementSpace &fes) override;
|
||||
void AssembleGradPA(const Vector &x, const FiniteElementSpace &fes) override;
|
||||
void AddMultPA(const Vector &x, Vector &y) const override;
|
||||
void AddMultGradPA(const Vector &x, Vector &y) const override;
|
||||
void AssembleGradDiagonalPA(Vector &diag) const override;
|
||||
};
|
||||
|
||||
|
||||
/** This class is used to assemble the skew-symmetric form of the nonlinear term
|
||||
arising in the Navier-Stokes equations
|
||||
$.5*(u \cdot \nabla v, w ) - .5*(u \cdot \nabla w, v )$ */
|
||||
$.5*(u \cdot \nabla v, w ) - .5*(u \cdot \nabla w, v )$.
|
||||
Partial assembly is not supported; use VectorConvectionNLFIntegrator. */
|
||||
class SkewSymmetricVectorConvectionNLFIntegrator :
|
||||
public VectorConvectionNLFIntegrator
|
||||
{
|
||||
@@ -471,6 +526,13 @@ public:
|
||||
ElementTransformation &trans,
|
||||
const Vector &elfun,
|
||||
DenseMatrix &elmat) override;
|
||||
|
||||
using NonlinearFormIntegrator::AssemblePA;
|
||||
void AssemblePA(const FiniteElementSpace &fes) override;
|
||||
void AssembleGradPA(const Vector &x, const FiniteElementSpace &fes) override;
|
||||
void AddMultPA(const Vector &x, Vector &y) const override;
|
||||
void AddMultGradPA(const Vector &x, Vector &y) const override;
|
||||
void AssembleGradDiagonalPA(Vector &diag) const override;
|
||||
};
|
||||
|
||||
}
|
||||
|
||||
+354
-63
@@ -10,6 +10,7 @@
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "particleset.hpp"
|
||||
#include "../general/forall.hpp"
|
||||
|
||||
#if defined(MFEM_USE_MPI) && defined(MFEM_USE_GSLIB)
|
||||
|
||||
@@ -225,6 +226,7 @@ void ParticleSet::AddParticles(const Array<IDType> &new_ids,
|
||||
}
|
||||
}
|
||||
// Add new ids
|
||||
ids.HostReadWrite();
|
||||
ids.Append(new_ids);
|
||||
|
||||
// Update data
|
||||
@@ -244,6 +246,102 @@ void ParticleSet::AddParticles(const Array<IDType> &new_ids,
|
||||
#if defined(MFEM_USE_MPI) && defined(MFEM_USE_GSLIB)
|
||||
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
// Static helper: gather selected particle-vector entries into a compact buffer.
|
||||
// nvcc does not allow extended host/device lambdas in non-public members.
|
||||
static void GatherParticleVectorDevice(const ParticleVector &pv,
|
||||
const Array<int> &send_idxs,
|
||||
Vector &send_data,
|
||||
int nsend)
|
||||
{
|
||||
const int vdim = pv.GetVDim();
|
||||
const int ordering = pv.GetOrdering();
|
||||
const int num_particles = pv.GetNumParticles();
|
||||
const MemoryClass device_mc = Device::GetDeviceMemoryClass();
|
||||
send_data.SetSize(nsend*vdim);
|
||||
real_t *d_send_data =
|
||||
send_data.GetMemory().Write(device_mc, send_data.Size());
|
||||
const real_t *d_src = pv.GetMemory().Read(device_mc, pv.Size());
|
||||
const int *d_send_idxs = send_idxs.GetMemory().Read(device_mc, nsend);
|
||||
|
||||
mfem::forall(nsend, [=] MFEM_HOST_DEVICE (int i)
|
||||
{
|
||||
const int p = d_send_idxs[i];
|
||||
const int offset = (ordering == Ordering::byVDIM) ? p * vdim : p;
|
||||
const int stride = (ordering == Ordering::byVDIM) ? 1 : num_particles;
|
||||
|
||||
for (int c = 0; c < vdim; c++)
|
||||
{
|
||||
d_send_data[i*vdim + c] = d_src[offset + c*stride];
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
// Static helper: gather selected tag values into a compact buffer.
|
||||
// nvcc does not allow extended host/device lambdas in non-public members.
|
||||
static void GatherParticleTagsDevice(const Array<int> &tag,
|
||||
const Array<int> &send_idxs,
|
||||
Array<int> &send_tag,
|
||||
int nsend)
|
||||
{
|
||||
const MemoryClass device_mc = Device::GetDeviceMemoryClass();
|
||||
send_tag.SetSize(nsend);
|
||||
int *d_send_tag = send_tag.GetMemory().Write(device_mc, nsend);
|
||||
const int *d_tag = tag.GetMemory().Read(device_mc, tag.Size());
|
||||
const int *d_send_idxs = send_idxs.GetMemory().Read(device_mc, nsend);
|
||||
|
||||
mfem::forall(nsend, [=] MFEM_HOST_DEVICE (int i)
|
||||
{
|
||||
d_send_tag[i] = d_tag[d_send_idxs[i]];
|
||||
});
|
||||
}
|
||||
|
||||
// Static helper: scatter compact particle-vector entries to particle storage.
|
||||
// nvcc does not allow extended host/device lambdas in non-public members.
|
||||
static void ScatterParticleVectorDevice(ParticleVector &pv,
|
||||
const Vector &recv_data,
|
||||
const Array<int> &recv_locs,
|
||||
int nrecv)
|
||||
{
|
||||
const int vdim = pv.GetVDim();
|
||||
const int ordering = pv.GetOrdering();
|
||||
const int num_particles = pv.GetNumParticles();
|
||||
const MemoryClass device_mc = Device::GetDeviceMemoryClass();
|
||||
const real_t *d_recv_data =
|
||||
recv_data.GetMemory().Read(device_mc, recv_data.Size());
|
||||
const int *d_recv_locs = recv_locs.GetMemory().Read(device_mc, nrecv);
|
||||
real_t *d_dst = pv.GetMemory().ReadWrite(device_mc, pv.Size());
|
||||
|
||||
mfem::forall(nrecv, [=] MFEM_HOST_DEVICE (int i)
|
||||
{
|
||||
const int p = d_recv_locs[i];
|
||||
const int offset = (ordering == Ordering::byVDIM) ? p * vdim : p;
|
||||
const int stride = (ordering == Ordering::byVDIM) ? 1 : num_particles;
|
||||
|
||||
for (int c = 0; c < vdim; c++)
|
||||
{
|
||||
d_dst[offset + c*stride] = d_recv_data[i*vdim + c];
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
// Static helper: scatter compact tag values to particle storage.
|
||||
// nvcc does not allow extended host/device lambdas in non-public members.
|
||||
static void ScatterParticleTagsDevice(Array<int> &tag,
|
||||
const Array<int> &recv_tag,
|
||||
const Array<int> &recv_locs,
|
||||
int nrecv)
|
||||
{
|
||||
const MemoryClass device_mc = Device::GetDeviceMemoryClass();
|
||||
const int *d_recv_tag = recv_tag.GetMemory().Read(device_mc, nrecv);
|
||||
const int *d_recv_locs = recv_locs.GetMemory().Read(device_mc, nrecv);
|
||||
int *d_tag = tag.GetMemory().ReadWrite(device_mc, tag.Size());
|
||||
|
||||
mfem::forall(nrecv, [=] MFEM_HOST_DEVICE (int i)
|
||||
{
|
||||
d_tag[d_recv_locs[i]] = d_recv_tag[i];
|
||||
});
|
||||
}
|
||||
|
||||
template<size_t NBytes>
|
||||
void ParticleSet::TransferParticlesImpl(ParticleSet &pset,
|
||||
const Array<int> &send_idxs,
|
||||
@@ -266,37 +364,108 @@ void ParticleSet::TransferParticlesImpl(ParticleSet &pset,
|
||||
array_init(parr_t, &gsl_arr, send_idxs.Size());
|
||||
pdata_arr = (parr_t*) gsl_arr.ptr;
|
||||
|
||||
int nparticles = pset.GetNParticles();
|
||||
int nsend = send_idxs.Size();
|
||||
gsl_arr.n = send_idxs.Size();
|
||||
|
||||
const int *h_send_idxs_initial = send_idxs.HostRead();
|
||||
const IDType *h_ids = pset.GetIDs().HostRead();
|
||||
for (int i = 0; i < send_idxs.Size(); i++)
|
||||
{
|
||||
parr_t &pdata = pdata_arr[i];
|
||||
pdata.id = pset.GetIDs()[send_idxs[i]];
|
||||
pdata.id = h_ids[h_send_idxs_initial[i]];
|
||||
}
|
||||
|
||||
// Copy particle data directly into pdata
|
||||
size_t counter = 0;
|
||||
for (int f = -1; f < pset.GetNFields(); f++)
|
||||
// Pack coords and fields into the GSLIB send buffer. Device-resident data
|
||||
// is first gathered into a compact device buffer so that only selected
|
||||
// particles are copied back to host. Host-resident data is packed directly.
|
||||
int max_vdim = pset.Coords().GetVDim();
|
||||
for (int f = 0; f < pset.GetNFields(); f++)
|
||||
{
|
||||
int f_vdim = pset.Field(f).GetVDim();
|
||||
if (f_vdim > max_vdim) { max_vdim = f_vdim; }
|
||||
}
|
||||
Vector send_data;
|
||||
Array<int> send_tag;
|
||||
if (Device::IsEnabled())
|
||||
{
|
||||
send_data.SetSize(nsend * max_vdim); // allocate max size over all fields
|
||||
send_tag.SetSize(nsend);
|
||||
}
|
||||
|
||||
size_t counter = 0;
|
||||
for (int f = -1; f < pset.GetNFields(); f++)
|
||||
{
|
||||
const ParticleVector &pv = f == -1 ? pset.Coords() : pset.Field(f);
|
||||
const int vdim = pv.GetVDim();
|
||||
const int ordering = pv.GetOrdering();
|
||||
const int num_particles = pv.GetNumParticles();
|
||||
const bool use_dev = Device::IsEnabled() && pv.UseDevice();
|
||||
|
||||
if (use_dev)
|
||||
{
|
||||
ParticleVector &pv = (f == -1 ? pset.Coords() : pset.Field(f));
|
||||
for (int c = 0; c < pv.GetVDim(); c++)
|
||||
GatherParticleVectorDevice(pv, send_idxs, send_data, nsend);
|
||||
|
||||
const real_t *h_send_data = send_data.HostRead();
|
||||
for (int i = 0; i < nsend; i++)
|
||||
{
|
||||
std::memcpy(pdata.data.data() + counter, &pv(send_idxs[i], c),
|
||||
sizeof(real_t));
|
||||
counter += sizeof(real_t);
|
||||
std::memcpy(pdata_arr[i].data.data() + counter,
|
||||
h_send_data + i*vdim, vdim * sizeof(real_t));
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
const real_t *h_src = pv.HostRead();
|
||||
const int *h_send_idxs = send_idxs.HostRead();
|
||||
for (int i = 0; i < nsend; i++)
|
||||
{
|
||||
parr_t &pdata = pdata_arr[i];
|
||||
const int p = h_send_idxs[i];
|
||||
const int offset = (ordering == Ordering::byVDIM) ? p * vdim : p;
|
||||
const int stride = (ordering == Ordering::byVDIM) ? 1 :
|
||||
num_particles;
|
||||
|
||||
for (int c = 0; c < vdim; c++)
|
||||
{
|
||||
std::memcpy(pdata.data.data() + counter + c*sizeof(real_t),
|
||||
h_src + offset + c*stride, sizeof(real_t));
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
// Copy tags
|
||||
for (int t = 0; t < pset.GetNTags(); t++)
|
||||
{
|
||||
Array<int> &tag_arr = pset.Tag(t);
|
||||
std::memcpy(pdata.data.data() + counter, &tag_arr[send_idxs[i]],
|
||||
sizeof(int));
|
||||
counter += sizeof(int);
|
||||
}
|
||||
counter += vdim*sizeof(real_t);
|
||||
}
|
||||
|
||||
int nparticles = pset.GetNParticles();
|
||||
int nsend = send_idxs.Size();
|
||||
// Pack tags after all real_t data. Each tag uses the same selective
|
||||
// device gather path when its Array is device-resident.
|
||||
for (int t = 0; t < pset.GetNTags(); t++)
|
||||
{
|
||||
const Array<int> &tag = pset.Tag(t);
|
||||
const size_t tag_counter = counter + t*sizeof(int);
|
||||
const bool use_dev = Device::IsEnabled() && tag.UseDevice();
|
||||
|
||||
if (use_dev)
|
||||
{
|
||||
GatherParticleTagsDevice(tag, send_idxs, send_tag, nsend);
|
||||
|
||||
const int *h_send_tag = send_tag.HostRead();
|
||||
for (int i = 0; i < nsend; i++)
|
||||
{
|
||||
std::memcpy(pdata_arr[i].data.data() + tag_counter,
|
||||
h_send_tag + i, sizeof(int));
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
const int *h_tag = tag.HostRead();
|
||||
const int *h_send_idxs = send_idxs.HostRead();
|
||||
for (int i = 0; i < nsend; i++)
|
||||
{
|
||||
std::memcpy(pdata_arr[i].data.data() + tag_counter,
|
||||
h_tag + h_send_idxs[i], sizeof(int));
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
// Transfer particles
|
||||
sarray_transfer_ext(parr_t, &gsl_arr, send_ranks.GetData(),
|
||||
@@ -304,11 +473,20 @@ void ParticleSet::TransferParticlesImpl(ParticleSet &pset,
|
||||
|
||||
// Make sure we have enough space for received particles
|
||||
int nrecv = (int) gsl_arr.n;
|
||||
|
||||
Vector recv_data;
|
||||
Array<int> recv_tag;
|
||||
if (Device::IsEnabled())
|
||||
{
|
||||
recv_data.SetSize(nrecv * max_vdim);
|
||||
recv_tag.SetSize(nrecv);
|
||||
}
|
||||
|
||||
int ndelete = nsend - nrecv;
|
||||
if (ndelete > 0)
|
||||
{
|
||||
// Remove unneeded particles
|
||||
auto datap = const_cast<int*>(send_idxs.GetData());
|
||||
auto datap = const_cast<int*>(send_idxs.HostRead());
|
||||
Array<int> delete_idxs(datap + nrecv, ndelete);
|
||||
pset.RemoveParticles(delete_idxs);
|
||||
}
|
||||
@@ -319,47 +497,133 @@ void ParticleSet::TransferParticlesImpl(ParticleSet &pset,
|
||||
|
||||
pdata_arr = (parr_t*) gsl_arr.ptr;
|
||||
|
||||
// Add newly-recvd data directly to active state
|
||||
// Make a list of new IDs to add
|
||||
int num_new = nrecv > nsend ? nrecv - nsend : 0;
|
||||
Array<IDType> new_ids(num_new);
|
||||
for (int i = 0; i < num_new; i++)
|
||||
{
|
||||
new_ids[i] = pdata_arr[nsend + i].id;
|
||||
}
|
||||
|
||||
// Add particles in batch
|
||||
Array<int> new_indices;
|
||||
if (num_new > 0)
|
||||
{
|
||||
pset.AddParticles(new_ids, &new_indices);
|
||||
}
|
||||
|
||||
// Map each received packet to the local particle slot it updates.
|
||||
Array<int> recv_locs(nrecv);
|
||||
int *h_recv_locs = recv_locs.HostWrite();
|
||||
const int *h_send_idxs_recv = send_idxs.HostRead();
|
||||
for (int i = 0; i < nrecv; i++)
|
||||
{
|
||||
parr_t &pdata = pdata_arr[i];
|
||||
IDType id = pdata.id;
|
||||
|
||||
int new_loc_idx;
|
||||
if (i < nsend) // update existing particle
|
||||
{
|
||||
new_loc_idx = send_idxs[i];
|
||||
pset.UpdateID(new_loc_idx, id);
|
||||
h_recv_locs[i] = h_send_idxs_recv[i];
|
||||
pset.UpdateID(h_recv_locs[i], pdata.id);
|
||||
}
|
||||
else
|
||||
{
|
||||
// add new particle
|
||||
Array<int> idx_temp;
|
||||
pset.AddParticles(Array<IDType>({id}), &idx_temp);
|
||||
new_loc_idx = idx_temp[0]; // Get index of newly-added particle
|
||||
h_recv_locs[i] = new_indices[i - nsend];
|
||||
}
|
||||
}
|
||||
|
||||
size_t counter = 0;
|
||||
for (int f = -1; f < pset.GetNFields(); f++)
|
||||
// Unpack coords and fields from GSLIB host packets. Device-resident
|
||||
// destinations use a compact host buffer followed by a device scatter.
|
||||
size_t recv_counter = 0;
|
||||
for (int f = -1; f < pset.GetNFields(); f++)
|
||||
{
|
||||
ParticleVector &pv = (f == -1 ? pset.Coords() : pset.Field(f));
|
||||
const int vdim = pv.GetVDim();
|
||||
const int ordering = pv.GetOrdering();
|
||||
const int num_particles = pv.GetNumParticles();
|
||||
const bool use_dev = Device::IsEnabled() && pv.UseDevice();
|
||||
|
||||
if (use_dev)
|
||||
{
|
||||
ParticleVector &pv = (f == -1 ? pset.Coords() : pset.Field(f));
|
||||
for (int c = 0; c < pv.GetVDim(); c++)
|
||||
recv_data.SetSize(nrecv*vdim);
|
||||
real_t *h_recv_data = recv_data.HostWrite();
|
||||
|
||||
for (int i = 0; i < nrecv; i++)
|
||||
{
|
||||
real_t& val = pv(new_loc_idx, c);
|
||||
std::memcpy(&val, pdata.data.data() + counter, sizeof(real_t));
|
||||
counter += sizeof(real_t);
|
||||
std::memcpy(h_recv_data + i*vdim,
|
||||
pdata_arr[i].data.data() + recv_counter,
|
||||
vdim*sizeof(real_t));
|
||||
}
|
||||
|
||||
ScatterParticleVectorDevice(pv, recv_data, recv_locs, nrecv);
|
||||
}
|
||||
else
|
||||
{
|
||||
real_t *h_dst = pv.HostReadWrite();
|
||||
const int *h_recv_locs_read = recv_locs.HostRead();
|
||||
for (int i = 0; i < nrecv; i++)
|
||||
{
|
||||
parr_t &pdata = pdata_arr[i];
|
||||
const int p = h_recv_locs_read[i];
|
||||
const int offset = (ordering == Ordering::byVDIM) ? p * vdim : p;
|
||||
const int stride = (ordering == Ordering::byVDIM) ? 1 :
|
||||
num_particles;
|
||||
|
||||
for (int c = 0; c < vdim; c++)
|
||||
{
|
||||
std::memcpy(h_dst + offset + c*stride,
|
||||
pdata.data.data() + recv_counter + c*sizeof(real_t),
|
||||
sizeof(real_t));
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
for (int t = 0; t < pset.GetNTags(); t++)
|
||||
recv_counter += vdim*sizeof(real_t);
|
||||
}
|
||||
|
||||
// Unpack tags after all real_t data, using the same compact scatter path
|
||||
// for device-resident tag arrays.
|
||||
for (int t = 0; t < pset.GetNTags(); t++)
|
||||
{
|
||||
Array<int> &tag = pset.Tag(t);
|
||||
const size_t tag_counter = recv_counter + t*sizeof(int);
|
||||
const bool use_dev = Device::IsEnabled() && tag.UseDevice();
|
||||
|
||||
if (use_dev)
|
||||
{
|
||||
Array<int> &tag_arr = pset.Tag(t);
|
||||
std::memcpy(&tag_arr[new_loc_idx],
|
||||
pdata.data.data() + counter, sizeof(int));
|
||||
counter += sizeof(int);
|
||||
recv_tag.SetSize(nrecv);
|
||||
int *h_recv_tag = recv_tag.HostWrite();
|
||||
|
||||
for (int i = 0; i < nrecv; i++)
|
||||
{
|
||||
std::memcpy(h_recv_tag + i,
|
||||
pdata_arr[i].data.data() + tag_counter, sizeof(int));
|
||||
}
|
||||
|
||||
ScatterParticleTagsDevice(tag, recv_tag, recv_locs, nrecv);
|
||||
}
|
||||
else
|
||||
{
|
||||
int *h_tag = tag.HostReadWrite();
|
||||
const int *h_recv_locs_read = recv_locs.HostRead();
|
||||
for (int i = 0; i < nrecv; i++)
|
||||
{
|
||||
std::memcpy(h_tag + h_recv_locs_read[i],
|
||||
pdata_arr[i].data.data() + tag_counter, sizeof(int));
|
||||
}
|
||||
}
|
||||
}
|
||||
array_free(&gsl_arr);
|
||||
|
||||
// Restore Device validity if needed
|
||||
for (int f = -1; f < pset.GetNFields(); f++)
|
||||
{
|
||||
ParticleVector &pv = (f == -1 ? pset.Coords() : pset.Field(f));
|
||||
pv.ReadWrite(pv.UseDevice());
|
||||
}
|
||||
for (int t = 0; t < pset.GetNTags(); t++)
|
||||
{
|
||||
Array<int> &tag_arr = pset.Tag(t);
|
||||
if (tag_arr.UseDevice()) { tag_arr.ReadWrite(true); }
|
||||
}
|
||||
}
|
||||
|
||||
template<size_t NBytes>
|
||||
@@ -526,11 +790,14 @@ ParticleSet::ParticleSet(int id_stride_, IDType id_counter_, int num_particles,
|
||||
int dim, Ordering::Type coords_ordering, const Array<int> &field_vdims,
|
||||
const Array<Ordering::Type> &field_orderings,
|
||||
const Array<const char*> &field_names_, int num_tags,
|
||||
const Array<const char*> &tag_names_)
|
||||
const Array<const char*> &tag_names_,
|
||||
bool use_device)
|
||||
: id_stride(id_stride_),
|
||||
id_counter(id_counter_),
|
||||
coords(dim, coords_ordering)
|
||||
{
|
||||
if (use_device) { coords.UseDevice(true); }
|
||||
|
||||
// Initialize fields
|
||||
for (int f = 0; f < field_vdims.Size(); f++)
|
||||
{
|
||||
@@ -580,21 +847,22 @@ bool ParticleSet::IsValidParticle(const Particle &p) const
|
||||
}
|
||||
|
||||
ParticleSet::ParticleSet(int num_particles, int dim,
|
||||
Ordering::Type coords_ordering)
|
||||
Ordering::Type coords_ordering,
|
||||
bool use_device)
|
||||
: ParticleSet(1, 0, num_particles, dim, coords_ordering, Array<int>(),
|
||||
Array<Ordering::Type>(), Array<const char*>(), 0,
|
||||
Array<const char*>())
|
||||
Array<const char*>(), use_device)
|
||||
{
|
||||
|
||||
}
|
||||
|
||||
ParticleSet::ParticleSet(int num_particles, int dim,
|
||||
const Array<int> &field_vdims, int num_tags,
|
||||
Ordering::Type all_ordering)
|
||||
Ordering::Type all_ordering, bool use_device)
|
||||
: ParticleSet(1, 0, num_particles, dim, all_ordering, field_vdims,
|
||||
GetOrderingArray(all_ordering, field_vdims.Size()),
|
||||
GetEmptyNameArray(field_vdims.Size()), num_tags,
|
||||
GetEmptyNameArray(num_tags))
|
||||
GetEmptyNameArray(num_tags), use_device)
|
||||
{
|
||||
}
|
||||
|
||||
@@ -602,11 +870,11 @@ ParticleSet::ParticleSet(int num_particles, int dim,
|
||||
const Array<int> &field_vdims, const Array<const
|
||||
char*> &field_names_, int num_tags,
|
||||
const Array<const char*> &tag_names_,
|
||||
Ordering::Type all_ordering)
|
||||
Ordering::Type all_ordering, bool use_device)
|
||||
: ParticleSet(1, 0, num_particles, dim, all_ordering, field_vdims,
|
||||
GetOrderingArray(all_ordering, field_vdims.Size()),
|
||||
field_names_, num_tags,
|
||||
tag_names_)
|
||||
tag_names_, use_device)
|
||||
{
|
||||
|
||||
}
|
||||
@@ -616,9 +884,9 @@ ParticleSet::ParticleSet(int num_particles, int dim,
|
||||
const Array<int> &field_vdims,
|
||||
const Array<Ordering::Type> &field_orderings,
|
||||
const Array<const char*> &field_names_, int num_tags,
|
||||
const Array<const char*> &tag_names_)
|
||||
const Array<const char*> &tag_names_, bool use_device)
|
||||
: ParticleSet(1, 0, num_particles, dim, coords_ordering, field_vdims,
|
||||
field_orderings, field_names_, num_tags, tag_names_)
|
||||
field_orderings, field_names_, num_tags, tag_names_, use_device)
|
||||
{
|
||||
|
||||
}
|
||||
@@ -627,21 +895,21 @@ ParticleSet::ParticleSet(int num_particles, int dim,
|
||||
|
||||
#ifdef MFEM_USE_MPI
|
||||
ParticleSet::ParticleSet(MPI_Comm comm_, int rank_num_particles, int dim,
|
||||
Ordering::Type coords_ordering)
|
||||
Ordering::Type coords_ordering, bool use_device)
|
||||
: ParticleSet(comm_, rank_num_particles, dim, coords_ordering, Array<int>(),
|
||||
Array<Ordering::Type>(), Array<const char*>(), 0,
|
||||
Array<const char*>())
|
||||
Array<const char*>(), use_device)
|
||||
{
|
||||
|
||||
};
|
||||
|
||||
ParticleSet::ParticleSet(MPI_Comm comm_, int rank_num_particles, int dim,
|
||||
const Array<int> &field_vdims, int num_tags,
|
||||
Ordering::Type all_ordering)
|
||||
Ordering::Type all_ordering, bool use_device)
|
||||
: ParticleSet(comm_, rank_num_particles, dim, all_ordering, field_vdims,
|
||||
GetOrderingArray(all_ordering, field_vdims.Size()),
|
||||
GetEmptyNameArray(field_vdims.Size()), num_tags,
|
||||
GetEmptyNameArray(num_tags))
|
||||
GetEmptyNameArray(num_tags), use_device)
|
||||
{
|
||||
|
||||
}
|
||||
@@ -650,11 +918,11 @@ ParticleSet::ParticleSet(MPI_Comm comm_, int rank_num_particles, int dim,
|
||||
const Array<int> &field_vdims, const Array<const
|
||||
char*> &field_names_,
|
||||
int num_tags, const Array<const char*> &tag_names_,
|
||||
Ordering::Type all_ordering)
|
||||
Ordering::Type all_ordering, bool use_device)
|
||||
: ParticleSet(comm_, rank_num_particles, dim, all_ordering, field_vdims,
|
||||
GetOrderingArray(all_ordering, field_vdims.Size()),
|
||||
field_names_, num_tags,
|
||||
tag_names_)
|
||||
tag_names_, use_device)
|
||||
{
|
||||
|
||||
}
|
||||
@@ -664,7 +932,7 @@ ParticleSet::ParticleSet(MPI_Comm comm_, int rank_num_particles, int dim,
|
||||
const Array<int> &field_vdims,
|
||||
const Array<Ordering::Type> &field_orderings,
|
||||
const Array<const char*> &field_names_, int num_tags,
|
||||
const Array<const char*> &tag_names_)
|
||||
const Array<const char*> &tag_names_, bool use_device)
|
||||
: ParticleSet(GetSize(comm_), (IDType)GetRank(comm_),
|
||||
rank_num_particles,
|
||||
dim,
|
||||
@@ -673,7 +941,7 @@ ParticleSet::ParticleSet(MPI_Comm comm_, int rank_num_particles, int dim,
|
||||
field_orderings,
|
||||
field_names_,
|
||||
num_tags,
|
||||
tag_names_)
|
||||
tag_names_, use_device)
|
||||
{
|
||||
comm = comm_;
|
||||
#ifdef MFEM_USE_GSLIB
|
||||
@@ -705,6 +973,7 @@ int ParticleSet::AddField(int vdim, Ordering::Type field_ordering,
|
||||
}
|
||||
fields.emplace_back(std::make_unique<ParticleVector>(vdim, field_ordering,
|
||||
GetNParticles()));
|
||||
if (coords.UseDevice()) { fields.back()->UseDevice(true); }
|
||||
field_names.emplace_back(field_name_str);
|
||||
|
||||
return GetNFields() - 1;
|
||||
@@ -718,6 +987,7 @@ int ParticleSet::AddTag(const char* tag_name)
|
||||
tag_name_str = GetDefaultTagName(tag_names.size());
|
||||
}
|
||||
tags.emplace_back(std::make_unique<Array<int>>(GetNParticles()));
|
||||
if (coords.UseDevice()) { tags.back()->GetMemory().UseDevice(true); }
|
||||
tag_names.emplace_back(tag_name_str);
|
||||
|
||||
return GetNTags() - 1;
|
||||
@@ -782,7 +1052,7 @@ Particle ParticleSet::GetParticle(int i) const
|
||||
|
||||
for (int t = 0; t < GetNTags(); t++)
|
||||
{
|
||||
p.Tag(t) = Tag(t)[i];
|
||||
p.Tag(t) = Tag(t).HostRead()[i];
|
||||
}
|
||||
|
||||
return p;
|
||||
@@ -790,13 +1060,21 @@ Particle ParticleSet::GetParticle(int i) const
|
||||
|
||||
bool ParticleSet::IsParticleRefValid() const
|
||||
{
|
||||
if (coords.GetOrdering() == Ordering::byNODES)
|
||||
if (coords.GetOrdering() == Ordering::byNODES || coords.UseDevice())
|
||||
{
|
||||
return false;
|
||||
}
|
||||
for (int f = 0; f < GetNFields(); f++)
|
||||
{
|
||||
if (fields[f]->GetOrdering() == Ordering::byNODES)
|
||||
if (fields[f]->GetOrdering() == Ordering::byNODES ||
|
||||
fields[f]->UseDevice())
|
||||
{
|
||||
return false;
|
||||
}
|
||||
}
|
||||
for (int t = 0; t < GetNTags(); t++)
|
||||
{
|
||||
if (tags[t]->UseDevice())
|
||||
{
|
||||
return false;
|
||||
}
|
||||
@@ -806,6 +1084,10 @@ bool ParticleSet::IsParticleRefValid() const
|
||||
|
||||
Particle ParticleSet::GetParticleRef(int i)
|
||||
{
|
||||
MFEM_ASSERT(IsParticleRefValid(),
|
||||
"GetParticleRef is only valid when coordinates and fields are "
|
||||
"ordered byVDIM and particle data is host-resident.");
|
||||
|
||||
Particle p = CreateParticle();
|
||||
|
||||
Coords().GetValuesRef(i, p.Coords());
|
||||
@@ -839,7 +1121,7 @@ void ParticleSet::SetParticle(int i, const Particle &p)
|
||||
|
||||
for (int t = 0; t < GetNTags(); t++)
|
||||
{
|
||||
Tag(t)[i] = p.Tag(t);
|
||||
Tag(t).HostReadWrite()[i] = p.Tag(t);
|
||||
}
|
||||
}
|
||||
|
||||
@@ -900,6 +1182,15 @@ void ParticleSet::PrintCSV(const char *fname, const Array<int> &field_idxs,
|
||||
#ifdef MFEM_USE_MPI
|
||||
int rank = GetRank(comm);
|
||||
#endif // MFEM_USE_MPI
|
||||
// make sure we can read tag data on host. fields and coords will be read as
|
||||
// needed in the loop below, so we don't need to pre-read them here.
|
||||
for (int i = 0; i < GetNTags(); i++)
|
||||
{
|
||||
tags[i]->HostRead();
|
||||
}
|
||||
ids.HostRead();
|
||||
|
||||
// Write particle data
|
||||
for (int i = 0; i < GetNParticles(); i++)
|
||||
{
|
||||
ss_data << ids[i];
|
||||
|
||||
+49
-12
@@ -211,6 +211,12 @@ public:
|
||||
* byVDIM). The unique_ptrs to all the ParticleVectors are stored in the
|
||||
* std::vector \ref fields.
|
||||
*
|
||||
* @par Device Behavior:
|
||||
* When a ParticleSet is constructed with \p use_device=true, \ref coords and
|
||||
* all ParticleVector fields are marked to use device memory. Fields added
|
||||
* later through \ref AddField inherit the current device mode (through
|
||||
* \ref coords).
|
||||
*
|
||||
* @par Tags:
|
||||
* Tags represent integers associated with each particle. For a given tag,
|
||||
* all particle data are stored in a single Array<int>. The unique_ptrs to all
|
||||
@@ -369,7 +375,10 @@ protected:
|
||||
* ID of a particle.
|
||||
*/
|
||||
void UpdateID(int local_idx, IDType new_global_id)
|
||||
{ ids[local_idx] = new_global_id; }
|
||||
{
|
||||
ids.HostReadWrite();
|
||||
ids[local_idx] = new_global_id;
|
||||
}
|
||||
|
||||
/** @brief Create a Particle object with the same spatial dimension,
|
||||
* number of fields and field vdims, and number of tags as this ParticleSet.
|
||||
@@ -399,12 +408,14 @@ protected:
|
||||
* @param[in] field_names_ Array of field names.
|
||||
* @param[in] num_tags Number of tags to register.
|
||||
* @param[in] tag_names_ Array of tag names.
|
||||
* @param[in] use_device Use device memory for particle fields.
|
||||
*/
|
||||
ParticleSet(int id_stride_, IDType id_counter_, int num_particles, int dim,
|
||||
Ordering::Type coords_ordering, const Array<int> &field_vdims,
|
||||
const Array<Ordering::Type> &field_orderings,
|
||||
const Array<const char*> &field_names_, int num_tags,
|
||||
const Array<const char*> &tag_names_);
|
||||
const Array<const char*> &tag_names_,
|
||||
bool use_device);
|
||||
|
||||
public:
|
||||
|
||||
@@ -413,9 +424,12 @@ public:
|
||||
* @param[in] num_particles Number of particles to initialize.
|
||||
* @param[in] dim Particle spatial dimension.
|
||||
* @param[in] coords_ordering Ordering of coordinates.
|
||||
* @param[in] use_device (Optional) Use device memory for particle
|
||||
* fields.
|
||||
*/
|
||||
ParticleSet(int num_particles, int dim,
|
||||
Ordering::Type coords_ordering=Ordering::byVDIM);
|
||||
Ordering::Type coords_ordering=Ordering::byVDIM,
|
||||
bool use_device=false);
|
||||
|
||||
/** @brief Construct a serial ParticleSet with specified fields and tags at
|
||||
* construction.
|
||||
@@ -426,9 +440,12 @@ public:
|
||||
* @param[in] num_tags Number of tags to register.
|
||||
* @param[in] all_ordering (Optional) Ordering of coordinates and
|
||||
* field ParticleVector.
|
||||
* @param[in] use_device (Optional) Use device memory for particle
|
||||
* fields.
|
||||
*/
|
||||
ParticleSet(int num_particles, int dim, const Array<int> &field_vdims,
|
||||
int num_tags, Ordering::Type all_ordering=Ordering::byVDIM);
|
||||
int num_tags, Ordering::Type all_ordering=Ordering::byVDIM,
|
||||
bool use_device=false);
|
||||
|
||||
/** @brief Construct a serial ParticleSet with specified fields and tags at
|
||||
* construction, with names.
|
||||
@@ -441,11 +458,14 @@ public:
|
||||
* @param[in] tag_names_ Array of tag names.
|
||||
* @param[in] all_ordering (Optional) Ordering of coordinates and
|
||||
* field ParticleVector.
|
||||
* @param[in] use_device (Optional) Use device memory for particle
|
||||
* fields.
|
||||
*/
|
||||
ParticleSet(int num_particles, int dim, const Array<int> &field_vdims,
|
||||
const Array<const char*> &field_names_, int num_tags,
|
||||
const Array<const char*> &tag_names_,
|
||||
Ordering::Type all_ordering=Ordering::byVDIM);
|
||||
Ordering::Type all_ordering=Ordering::byVDIM,
|
||||
bool use_device=false);
|
||||
|
||||
/** @brief Comprehensive serial constructor of ParticleSet.
|
||||
*
|
||||
@@ -457,12 +477,15 @@ public:
|
||||
* @param[in] field_names_ Array of field names.
|
||||
* @param[in] num_tags Number of tags to register.
|
||||
* @param[in] tag_names_ Array of tag names.
|
||||
* @param[in] use_device (Optional) Use device memory for particle
|
||||
* fields.
|
||||
*/
|
||||
ParticleSet(int num_particles, int dim, Ordering::Type coords_ordering,
|
||||
const Array<int> &field_vdims,
|
||||
const Array<Ordering::Type> &field_orderings,
|
||||
const Array<const char*> &field_names_, int num_tags,
|
||||
const Array<const char*> &tag_names_);
|
||||
const Array<const char*> &tag_names_,
|
||||
bool use_device=false);
|
||||
|
||||
#ifdef MFEM_USE_MPI
|
||||
/** @brief Construct a parallel ParticleSet.
|
||||
@@ -471,9 +494,12 @@ public:
|
||||
* @param[in] rank_num_particles Number of particles to initialize.
|
||||
* @param[in] dim Particle spatial dimension.
|
||||
* @param[in] coords_ordering (Optional) Ordering of coordinates.
|
||||
* @param[in] use_device (Optional) Use device memory for particle
|
||||
* fields.
|
||||
*/
|
||||
ParticleSet(MPI_Comm comm_, int rank_num_particles, int dim,
|
||||
Ordering::Type coords_ordering=Ordering::byVDIM);
|
||||
Ordering::Type coords_ordering=Ordering::byVDIM,
|
||||
bool use_device=false);
|
||||
|
||||
/** @brief Construct a parallel ParticleSet with specified fields and tags
|
||||
* at construction.
|
||||
@@ -485,10 +511,13 @@ public:
|
||||
* @param[in] num_tags Number of tags to register.
|
||||
* @param[in] all_ordering (Optional) Ordering of coordinates and
|
||||
* field ParticleVector.
|
||||
* @param[in] use_device (Optional) Use device memory for particle
|
||||
* fields.
|
||||
*/
|
||||
ParticleSet(MPI_Comm comm_, int rank_num_particles, int dim,
|
||||
const Array<int> &field_vdims, int num_tags,
|
||||
Ordering::Type all_ordering=Ordering::byVDIM);
|
||||
Ordering::Type all_ordering=Ordering::byVDIM,
|
||||
bool use_device=false);
|
||||
|
||||
/** @brief Construct a parallel ParticleSet with specified fields and tags
|
||||
* at construction, with names (for PrintCSV()).
|
||||
@@ -502,12 +531,15 @@ public:
|
||||
* @param[in] tag_names_ Array of tag names.
|
||||
* @param[in] all_ordering (Optional) Ordering of coordinates and
|
||||
* field ParticleVector.
|
||||
* @param[in] use_device (Optional) Use device memory for particle
|
||||
* fields.
|
||||
*/
|
||||
ParticleSet(MPI_Comm comm_, int rank_num_particles, int dim,
|
||||
const Array<int> &field_vdims,
|
||||
const Array<const char*> &field_names_,
|
||||
int num_tags, const Array<const char*> &tag_names_,
|
||||
Ordering::Type all_ordering=Ordering::byVDIM);
|
||||
Ordering::Type all_ordering=Ordering::byVDIM,
|
||||
bool use_device=false);
|
||||
|
||||
/** @brief Comprehensive parallel constructor of ParticleSet.
|
||||
*
|
||||
@@ -520,12 +552,15 @@ public:
|
||||
* @param[in] field_names_ Array of field names.
|
||||
* @param[in] num_tags Number of tags to register.
|
||||
* @param[in] tag_names_ Array of tag names.
|
||||
* @param[in] use_device (Optional) Use device memory for particle
|
||||
* fields.
|
||||
*/
|
||||
ParticleSet(MPI_Comm comm_, int rank_num_particles, int dim,
|
||||
Ordering::Type coords_ordering, const Array<int> &field_vdims,
|
||||
const Array<Ordering::Type> &field_orderings,
|
||||
const Array<const char*> &field_names_, int num_tags,
|
||||
const Array<const char*> &tag_names_);
|
||||
const Array<const char*> &tag_names_,
|
||||
bool use_device=false);
|
||||
|
||||
/// Get the MPI communicator for this ParticleSet.
|
||||
MPI_Comm GetComm() const { return comm; };
|
||||
@@ -545,6 +580,8 @@ public:
|
||||
* @param[in] field_ordering (Optional) Ordering::Type of the field.
|
||||
* @param[in] field_name (Optional) Name of the field.
|
||||
*
|
||||
* @note New fields inherit the current device mode of \ref coords.
|
||||
*
|
||||
* @return Index of the newly-added field.
|
||||
*/
|
||||
int AddField(int vdim, Ordering::Type field_ordering=Ordering::byVDIM,
|
||||
@@ -637,8 +674,8 @@ public:
|
||||
|
||||
/** @brief Determine if GetParticleRef is valid.
|
||||
*
|
||||
* If coordinates and all fields are ordered byVDIM, then returns true.
|
||||
* Otherwise, false.
|
||||
* Returns true when coordinates and all fields are ordered byVDIM and
|
||||
* particle data is host-resident. Otherwise, false.
|
||||
*/
|
||||
bool IsParticleRefValid() const;
|
||||
|
||||
|
||||
+11
-1
@@ -22,10 +22,20 @@ using namespace std;
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
ParGridFunction::ParGridFunction(ParFiniteElementSpace *pf, GridFunction *gf)
|
||||
ParGridFunction::ParGridFunction(ParFiniteElementSpace *pf, GridFunction *gf,
|
||||
bool preserve)
|
||||
{
|
||||
fes = pfes = pf;
|
||||
SetDataAndSize(gf->GetData(), gf->Size());
|
||||
|
||||
if (pfes->HaveDofSigns())
|
||||
{
|
||||
MFEM_VERIFY(!preserve, "Differing sign conventions for the serial and "
|
||||
"parallel grid functions will prevent preserving the serial "
|
||||
"GridFunctions in this context.");
|
||||
|
||||
pfes->ApplyDofSigns(HostReadWrite());
|
||||
}
|
||||
}
|
||||
|
||||
ParGridFunction::ParGridFunction(ParFiniteElementSpace *pf, HypreParVector *tv)
|
||||
|
||||
+6
-2
@@ -100,8 +100,12 @@ public:
|
||||
/// Construct a ParGridFunction using a GridFunction as external data.
|
||||
/** The parallel space @a *pf and the space used by @a *gf should match. The
|
||||
data from @a *gf is used as the local data of the ParGridFunction on each
|
||||
processor. The ParGridFunction does not assume ownership of the data. */
|
||||
ParGridFunction(ParFiniteElementSpace *pf, GridFunction *gf);
|
||||
processor. The ParGridFunction does not assume ownership of the data.
|
||||
The boolean, @a preserve, indicates that the data stored in @a *gf should
|
||||
remain unchanged. An error will occur if @a preserve is true and
|
||||
construction of a valid ParGridFunction requires the data to change. */
|
||||
ParGridFunction(ParFiniteElementSpace *pf, GridFunction *gf,
|
||||
bool preserve = true);
|
||||
|
||||
/** @brief Creates grid function on (all) dofs from a given vector on the
|
||||
true dofs, i.e. P tv. */
|
||||
|
||||
+9
-36
@@ -51,48 +51,21 @@ QuadratureInterpolator::DetKernels::Fallback(int DIM, int SDIM, int D1D,
|
||||
{
|
||||
if (DIM == 1)
|
||||
{
|
||||
if (SDIM == 1)
|
||||
{
|
||||
return internal::quadrature_interpolator::Det1D;
|
||||
}
|
||||
else if (SDIM == 2)
|
||||
{
|
||||
return internal::quadrature_interpolator::Det1DSurface<0, 0, 2>;
|
||||
}
|
||||
else if (SDIM == 3)
|
||||
{
|
||||
return internal::quadrature_interpolator::Det1DSurface<0, 0, 3>;
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
}
|
||||
else if (DIM == 2 && SDIM == 2)
|
||||
{
|
||||
return internal::quadrature_interpolator::Det2D<>;
|
||||
}
|
||||
else if (DIM == 2 && SDIM == 3)
|
||||
{
|
||||
return internal::quadrature_interpolator::Det2DSurface<>;
|
||||
if (SDIM == 1) { return internal::quadrature_interpolator::Det1D; }
|
||||
else if (SDIM == 2) { return internal::quadrature_interpolator::Det1DSurface<0,0,2>; }
|
||||
else if (SDIM == 3) { return internal::quadrature_interpolator::Det1DSurface<0,0,3>; }
|
||||
else { MFEM_ABORT(""); }
|
||||
}
|
||||
else if (DIM == 2 && SDIM == 2) { return internal::quadrature_interpolator::Det2D; }
|
||||
else if (DIM == 2 && SDIM == 3) { return internal::quadrature_interpolator::Det2DSurface; }
|
||||
else if (DIM == 3)
|
||||
{
|
||||
const int MD = DeviceDofQuadLimits::Get().MAX_DET_1D;
|
||||
const int MQ = DeviceDofQuadLimits::Get().MAX_DET_1D;
|
||||
if (D1D <= MD && Q1D <= MQ)
|
||||
{
|
||||
return internal::quadrature_interpolator::Det3D<0, 0, true>;
|
||||
}
|
||||
else
|
||||
{
|
||||
return internal::quadrature_interpolator::Det3D<0, 0, false>;
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("");
|
||||
if (D1D <= MD && Q1D <= MQ) { return internal::quadrature_interpolator::Det3D<0,0,true>; }
|
||||
else { return internal::quadrature_interpolator::Det3D<0,0,false>; }
|
||||
}
|
||||
else { MFEM_ABORT(""); }
|
||||
}
|
||||
|
||||
/// @endcond
|
||||
|
||||
+52
-38
@@ -31,9 +31,9 @@ namespace quadrature_interpolator
|
||||
{
|
||||
|
||||
template <QVectorLayout Q_LAYOUT, bool Integral>
|
||||
static void IntValues1D(const int NE, const real_t *b_, const real_t *detJ_,
|
||||
const real_t *x_, real_t *y_, const int vdim,
|
||||
const int d1d, const int q1d)
|
||||
static void ImplValues1D(const int NE, const real_t *b_, const real_t *detJ_,
|
||||
const real_t *x_, real_t *y_, const int vdim,
|
||||
const int d1d, const int q1d)
|
||||
{
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
@@ -72,15 +72,15 @@ template <QVectorLayout Q_LAYOUT>
|
||||
static void Values1D(const int NE, const real_t *b_, const real_t *x_,
|
||||
real_t *y_, const int vdim, const int d1d, const int q1d)
|
||||
{
|
||||
IntValues1D<Q_LAYOUT, false>(NE, b_, nullptr, x_, y_, vdim, d1d, q1d);
|
||||
ImplValues1D<Q_LAYOUT, false>(NE, b_, nullptr, x_, y_, vdim, d1d, q1d);
|
||||
}
|
||||
|
||||
// Template compute kernel for Values in 2D: tensor product version.
|
||||
template <QVectorLayout Q_LAYOUT, bool Integral, int T_VDIM = 0, int T_D1D = 0,
|
||||
int T_Q1D = 0, int T_NBZ = 1>
|
||||
static void IntValues2D(const int NE, const real_t *b_, const real_t *detJ_,
|
||||
const real_t *x_, real_t *y_, const int vdim = 0,
|
||||
const int d1d = 0, const int q1d = 0)
|
||||
static void ImplValues2D(const int NE, const real_t *b_, const real_t *detJ_,
|
||||
const real_t *x_, real_t *y_, const int vdim = 0,
|
||||
const int d1d = 0, const int q1d = 0)
|
||||
{
|
||||
static constexpr int NBZ = T_NBZ ? T_NBZ : 1;
|
||||
|
||||
@@ -159,16 +159,16 @@ static void Values2D(const int NE, const real_t *b_, const real_t *x_,
|
||||
real_t *y_, const int vdim = 0, const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
return IntValues2D<Q_LAYOUT, false, T_VDIM, T_D1D, T_Q1D, T_NBZ>(
|
||||
return ImplValues2D<Q_LAYOUT, false, T_VDIM, T_D1D, T_Q1D, T_NBZ>(
|
||||
NE, b_, nullptr, x_, y_, vdim, d1d, q1d);
|
||||
}
|
||||
|
||||
// Template compute kernel for Values in 3D: tensor product version.
|
||||
template <QVectorLayout Q_LAYOUT, bool Integral, int T_VDIM = 0, int T_D1D = 0,
|
||||
int T_Q1D = 0>
|
||||
static void IntValues3D(const int NE, const real_t *b_, const real_t *detJ_,
|
||||
const real_t *x_, real_t *y_, const int vdim = 0,
|
||||
const int d1d = 0, const int q1d = 0)
|
||||
static void ImplValues3D(const int NE, const real_t *b_, const real_t *detJ_,
|
||||
const real_t *x_, real_t *y_, const int vdim = 0,
|
||||
const int d1d = 0, const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
@@ -251,23 +251,23 @@ static void Values3D(const int NE, const real_t *b_, const real_t *x_,
|
||||
real_t *y_, const int vdim = 0, const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
return IntValues3D<Q_LAYOUT, false, T_VDIM, T_D1D, T_Q1D>(
|
||||
return ImplValues3D<Q_LAYOUT, false, T_VDIM, T_D1D, T_Q1D>(
|
||||
NE, b_, nullptr, x_, y_, vdim, d1d, q1d);
|
||||
}
|
||||
|
||||
template <bool Integral>
|
||||
void IntEval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags);
|
||||
void ImplEval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags);
|
||||
|
||||
inline void Eval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom, const DofToQuad &maps,
|
||||
const Vector &e_vec, Vector &q_val, Vector &q_der, Vector &q_det,
|
||||
const int eval_flags)
|
||||
{
|
||||
IntEval1D<false>(NE, vdim, q_layout, nullptr, geom, maps, e_vec, q_val,
|
||||
q_der, q_det, eval_flags);
|
||||
ImplEval1D<false>(NE, vdim, q_layout, nullptr, geom, maps, e_vec, q_val,
|
||||
q_der, q_det, eval_flags);
|
||||
}
|
||||
|
||||
// Template compute kernel for 2D quadrature interpolation:
|
||||
@@ -275,11 +275,11 @@ inline void Eval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template <bool Integral, const int T_VDIM, const int T_ND, const int T_NQ>
|
||||
static void
|
||||
IntEval2D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ_, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags)
|
||||
static void ImplEval2D(const int NE, const int vdim,
|
||||
const QVectorLayout q_layout, const real_t *detJ_,
|
||||
const GeometricFactors *geom, const DofToQuad &maps,
|
||||
const Vector &e_vec, Vector &q_val, Vector &q_der,
|
||||
Vector &q_det, const int eval_flags)
|
||||
{
|
||||
using QI = QuadratureInterpolator;
|
||||
|
||||
@@ -293,6 +293,12 @@ IntEval2D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
MFEM_ASSERT(!geom || geom->mesh->SpaceDimension() == 2, "");
|
||||
MFEM_VERIFY(ND <= QI::MAX_ND2D, "");
|
||||
MFEM_VERIFY(NQ <= QI::MAX_NQ2D, "");
|
||||
if constexpr(Integral)
|
||||
{
|
||||
MFEM_VERIFY(!(eval_flags & (QI::DERIVATIVES | QI::PHYSICAL_DERIVATIVES |
|
||||
QI::DETERMINANTS)),
|
||||
"Integral FE does not support computing derivatives");
|
||||
}
|
||||
const auto B = Reshape(maps.B.Read(), NQ, ND);
|
||||
const auto G = Reshape(maps.G.Read(), NQ, 2, ND);
|
||||
const auto J = Reshape(geom ? geom->J.Read() : nullptr, NQ, 2, 2, NE);
|
||||
@@ -449,8 +455,9 @@ static void Eval2D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const Vector &e_vec, Vector &q_val, Vector &q_der,
|
||||
Vector &q_det, const int eval_flags)
|
||||
{
|
||||
IntEval2D<false, T_VDIM, T_ND, T_NQ>(NE, vdim, q_layout, nullptr, geom, maps,
|
||||
e_vec, q_val, q_der, q_det, eval_flags);
|
||||
ImplEval2D<false, T_VDIM, T_ND, T_NQ>(NE, vdim, q_layout, nullptr, geom,
|
||||
maps, e_vec, q_val, q_der, q_det,
|
||||
eval_flags);
|
||||
}
|
||||
|
||||
// Template compute kernel for 3D quadrature interpolation:
|
||||
@@ -458,11 +465,11 @@ static void Eval2D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template <bool Integral, const int T_VDIM, const int T_ND, const int T_NQ>
|
||||
static void
|
||||
IntEval3D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ_, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags)
|
||||
static void ImplEval3D(const int NE, const int vdim,
|
||||
const QVectorLayout q_layout, const real_t *detJ_,
|
||||
const GeometricFactors *geom, const DofToQuad &maps,
|
||||
const Vector &e_vec, Vector &q_val, Vector &q_der,
|
||||
Vector &q_det, const int eval_flags)
|
||||
{
|
||||
using QI = QuadratureInterpolator;
|
||||
|
||||
@@ -477,6 +484,12 @@ IntEval3D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
MFEM_VERIFY(ND <= QI::MAX_ND3D, "");
|
||||
MFEM_VERIFY(NQ <= QI::MAX_NQ3D, "");
|
||||
MFEM_VERIFY(VDIM == 3 || !(eval_flags & QI::DETERMINANTS), "");
|
||||
if constexpr(Integral)
|
||||
{
|
||||
MFEM_VERIFY(!(eval_flags & (QI::DERIVATIVES | QI::PHYSICAL_DERIVATIVES |
|
||||
QI::DETERMINANTS)),
|
||||
"Integral FE does not support computing derivatives");
|
||||
}
|
||||
const auto B = Reshape(maps.B.Read(), NQ, ND);
|
||||
const auto G = Reshape(maps.G.Read(), NQ, 3, ND);
|
||||
const auto J = Reshape(geom ? geom->J.Read() : nullptr, NQ, 3, 3, NE);
|
||||
@@ -635,8 +648,9 @@ static void Eval3D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const Vector &e_vec, Vector &q_val, Vector &q_der,
|
||||
Vector &q_det, const int eval_flags)
|
||||
{
|
||||
IntEval3D<false, T_VDIM, T_ND, T_NQ>(NE, vdim, q_layout, nullptr, geom, maps,
|
||||
e_vec, q_val, q_der, q_det, eval_flags);
|
||||
ImplEval3D<false, T_VDIM, T_ND, T_NQ>(NE, vdim, q_layout, nullptr, geom,
|
||||
maps, e_vec, q_val, q_der, q_det,
|
||||
eval_flags);
|
||||
}
|
||||
|
||||
} // namespace quadrature_interpolator
|
||||
@@ -649,9 +663,9 @@ template <int DIM, QVectorLayout Q_LAYOUT, int VDIM, int D1D, int Q1D, int NBZ>
|
||||
QuadratureInterpolator::IntTensorEvalKernelType
|
||||
QuadratureInterpolator::IntTensorEvalKernels::Kernel()
|
||||
{
|
||||
if constexpr (DIM == 1) { return internal::quadrature_interpolator::IntValues1D<Q_LAYOUT, true>; }
|
||||
else if constexpr (DIM == 2) { return internal::quadrature_interpolator::IntValues2D<Q_LAYOUT, true, VDIM, D1D, Q1D, NBZ>; }
|
||||
else if constexpr (DIM == 3) { return internal::quadrature_interpolator::IntValues3D<Q_LAYOUT, true, VDIM, D1D, Q1D>; }
|
||||
if constexpr (DIM == 1) { return internal::quadrature_interpolator::ImplValues1D<Q_LAYOUT, true>; }
|
||||
else if constexpr (DIM == 2) { return internal::quadrature_interpolator::ImplValues2D<Q_LAYOUT, true, VDIM, D1D, Q1D, NBZ>; }
|
||||
else if constexpr (DIM == 3) { return internal::quadrature_interpolator::ImplValues3D<Q_LAYOUT, true, VDIM, D1D, Q1D>; }
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
@@ -670,9 +684,9 @@ QuadratureInterpolator::IntEvalKernelType
|
||||
QuadratureInterpolator::IntEvalKernels::Kernel()
|
||||
{
|
||||
using namespace internal::quadrature_interpolator;
|
||||
if constexpr (DIM == 1) { return IntEval1D<true>; }
|
||||
else if constexpr (DIM == 2) { return IntEval2D<true,VDIM,ND,NQ>; }
|
||||
else if constexpr (DIM == 3) { return IntEval3D<true,VDIM,ND,NQ>; }
|
||||
if constexpr (DIM == 1) { return ImplEval1D<true>; }
|
||||
else if constexpr (DIM == 2) { return ImplEval2D<true,VDIM,ND,NQ>; }
|
||||
else if constexpr (DIM == 3) { return ImplEval3D<true,VDIM,ND,NQ>; }
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
|
||||
@@ -268,8 +268,9 @@ static void Derivatives3D(const int NE,
|
||||
DeviceMatrix B(BG[0], D1D, Q1D);
|
||||
DeviceMatrix G(BG[1], D1D, Q1D);
|
||||
|
||||
MFEM_SHARED real_t sm0[3][MQ1*MQ1*MQ1];
|
||||
MFEM_SHARED real_t sm1[3][MQ1*MQ1*MQ1];
|
||||
constexpr int MDQ = MD1 > MQ1 ? MD1 : MQ1;
|
||||
MFEM_SHARED real_t sm0[3][MD1*MD1*MDQ];
|
||||
MFEM_SHARED real_t sm1[3][MD1*MQ1*MQ1];
|
||||
DeviceTensor<3> X(sm0[2], D1D, D1D, D1D);
|
||||
DeviceTensor<3> DDQ0(sm0[0], D1D, D1D, Q1D);
|
||||
DeviceTensor<3> DDQ1(sm0[1], D1D, D1D, Q1D);
|
||||
|
||||
+20
-14
@@ -111,10 +111,10 @@ namespace quadrature_interpolator
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template <bool Integral>
|
||||
void IntEval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ_, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags)
|
||||
void ImplEval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ_, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags)
|
||||
{
|
||||
using QI = QuadratureInterpolator;
|
||||
|
||||
@@ -123,6 +123,12 @@ void IntEval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
MFEM_ASSERT(maps.mode == DofToQuad::FULL, "internal error");
|
||||
MFEM_ASSERT(!geom || geom->mesh->SpaceDimension() == 1, "");
|
||||
MFEM_VERIFY(vdim == 1 || !(eval_flags & QI::DETERMINANTS), "");
|
||||
if constexpr(Integral)
|
||||
{
|
||||
MFEM_VERIFY(!(eval_flags & (QI::DERIVATIVES | QI::PHYSICAL_DERIVATIVES |
|
||||
QI::DETERMINANTS)),
|
||||
"Integral FE does not support computing derivatives");
|
||||
}
|
||||
const auto B_ = maps.B.Read();
|
||||
const auto G_ = maps.G.Read();
|
||||
const auto J = Reshape(geom ? geom->J.Read() : nullptr, nq, NE);
|
||||
@@ -202,17 +208,17 @@ void IntEval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
}
|
||||
|
||||
template void
|
||||
IntEval1D<true>(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags);
|
||||
|
||||
template void
|
||||
IntEval1D<false>(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
ImplEval1D<true>(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags);
|
||||
|
||||
template void
|
||||
ImplEval1D<false>(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags);
|
||||
|
||||
} // namespace quadrature_interpolator
|
||||
|
||||
} // namespace internal
|
||||
@@ -460,15 +466,15 @@ template <QVectorLayout Q_LAYOUT> auto IntFallbackTensorEvalKernel(int DIM)
|
||||
{
|
||||
if (DIM == 1)
|
||||
{
|
||||
return IntValues1D<Q_LAYOUT, true>;
|
||||
return ImplValues1D<Q_LAYOUT, true>;
|
||||
}
|
||||
else if (DIM == 2)
|
||||
{
|
||||
return IntValues2D<Q_LAYOUT, true>;
|
||||
return ImplValues2D<Q_LAYOUT, true>;
|
||||
}
|
||||
else if (DIM == 3)
|
||||
{
|
||||
return IntValues3D<Q_LAYOUT, true>;
|
||||
return ImplValues3D<Q_LAYOUT, true>;
|
||||
}
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
@@ -117,6 +117,10 @@ public:
|
||||
FiniteElementSpace is a vector space) and their determinants are computed
|
||||
and stored in @a q_det.
|
||||
|
||||
For Integral spaces, the flags VALUES requests the computation of the
|
||||
scalar field values. The result is stored in @a q_val. Derivative types
|
||||
are not supported.
|
||||
|
||||
For H(div)-conforming spaces, the flags VALUES / PHYSICAL_VALUES request
|
||||
the computation of the vector field values in reference or physical
|
||||
space, respectively. The flag PHYSICAL_MAGNITUDES requests the
|
||||
|
||||
+36
-17
@@ -14,7 +14,7 @@
|
||||
|
||||
#include "../config/config.hpp"
|
||||
|
||||
#if defined(MFEM_USE_CUDA) && defined(__CUDACC__)
|
||||
#if defined(MFEM_USE_CUDA)
|
||||
#include <cusparse.h>
|
||||
#include <library_types.h>
|
||||
#include <cuda_runtime.h>
|
||||
@@ -22,7 +22,7 @@
|
||||
#endif
|
||||
#include "cuda.hpp"
|
||||
|
||||
#if defined(MFEM_USE_HIP) && defined(__HIP__)
|
||||
#if defined(MFEM_USE_HIP)
|
||||
#include <hip/hip_runtime.h>
|
||||
#endif
|
||||
#include "hip.hpp"
|
||||
@@ -38,15 +38,6 @@
|
||||
#define CUB_IGNORE_DEPRECATED_CPP_DIALECT
|
||||
#define THRUST_IGNORE_DEPRECATED_CPP_DIALECT
|
||||
|
||||
// MFEM only supports using RAJA/CAMP backends in default stream mode because
|
||||
// memory calls are performed outside of the RAJA ecosystem
|
||||
#ifndef CAMP_USE_PLATFORM_DEFAULT_STREAM
|
||||
#define CAMP_USE_PLATFORM_DEFAULT_STREAM 1
|
||||
#else
|
||||
#if !CAMP_USE_PLATFORM_DEFAULT_STREAM
|
||||
#error "MFEM only supports RAJA/CAMP with the default platform stream."
|
||||
#endif
|
||||
#endif
|
||||
#include "RAJA/RAJA.hpp"
|
||||
#if defined(RAJA_ENABLE_CUDA) && !defined(MFEM_USE_CUDA)
|
||||
#error When RAJA is built with CUDA, MFEM_USE_CUDA=YES is required
|
||||
@@ -54,15 +45,17 @@
|
||||
#endif
|
||||
|
||||
#if !defined(MFEM_USE_CUDA_OR_HIP)
|
||||
constexpr bool mfem_use_gpu = false;
|
||||
#define MFEM_DEVICE
|
||||
#define MFEM_HOST
|
||||
#define MFEM_LAMBDA
|
||||
// #define MFEM_HOST_DEVICE // defined in config/config.hpp
|
||||
// MFEM_DEVICE_SYNC is made available for debugging purposes
|
||||
#define MFEM_DEVICE_SYNC
|
||||
// MFEM_STREAM_SYNC is used for UVM and MPI GPU-Aware kernels
|
||||
#define MFEM_STREAM_SYNC
|
||||
#endif
|
||||
|
||||
#if !defined(MFEM_USE_CUDA_OR_HIP_LANG)
|
||||
#define MFEM_DEVICE
|
||||
#define MFEM_HOST
|
||||
#define MFEM_LAMBDA
|
||||
// #define MFEM_HOST_DEVICE // defined in config/config.hpp
|
||||
#define MFEM_LAUNCH_BOUNDS(...)
|
||||
#endif
|
||||
|
||||
@@ -76,12 +69,19 @@ constexpr bool mfem_use_gpu = false;
|
||||
#define MFEM_FOREACH_THREAD(i,k,N) for(int i=0; i<N; i++)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT(i,k,N) MFEM_FOREACH_THREAD(i,k,N)
|
||||
// Assigns a thread block shaped (SX,SY,SZ) contiguous in x.
|
||||
// Example (3,2,1) block:
|
||||
// 0 (0,0), 1 (1,0), 2 (2,0)
|
||||
// 3 (1,0), 4 (1,1), 5 (2,1)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D(ix, iy, iz, k, SX, SY, SZ) \
|
||||
for (int iz = 0; iz < SZ; ++iz) \
|
||||
for (int iy = 0; iy < SY; ++iy) \
|
||||
for (int ix = 0; ix < SX; ++ix)
|
||||
// Assigns a thread block shaped (OX,OY,OZ) to work on items (SX,SY,SZ),
|
||||
// contiguous in x. This intentionally offsets threads
|
||||
// contiguous in x. This intentionally offsets threads within the block to avoid
|
||||
// shared memory bank conflicts.
|
||||
// Example (3,2,1) block assigned to work on (2,2,1) items:
|
||||
// 0 (0,0), 1 (1,0), 2 (N/A)
|
||||
// 3 (1,0), 4 (1,1), 5 (N/A)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D_OFFSET(ix, iy, iz, k, SX, SY, SZ, OX, \
|
||||
OY, OZ) \
|
||||
MFEM_FOREACH_THREAD_DIRECT_3D(ix, iy, iz, k, SX, SY, SZ)
|
||||
@@ -128,4 +128,23 @@ MFEM_HOST_DEVICE T AtomicAdd(T &add, const T val)
|
||||
#endif
|
||||
}
|
||||
|
||||
namespace mfem::internal
|
||||
{
|
||||
|
||||
#if defined(MFEM_USE_CUDA_OR_HIP) && !defined(MFEM_USE_CUDA_OR_HIP_LANG)
|
||||
static constexpr bool can_compile_kernels = false;
|
||||
#else
|
||||
static constexpr bool can_compile_kernels = true;
|
||||
#endif
|
||||
|
||||
template <bool can_compile_kernels = can_compile_kernels>
|
||||
void RequireKernelCompilation()
|
||||
{
|
||||
static_assert(
|
||||
can_compile_kernels,
|
||||
"The calling function needs to be compiled with CUDA/HIP language!");
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
#endif // MFEM_BACKENDS_HPP
|
||||
|
||||
+21
-10
@@ -18,14 +18,8 @@
|
||||
// CUDA block size used by MFEM.
|
||||
#define MFEM_CUDA_BLOCKS 256
|
||||
|
||||
#if defined(MFEM_USE_CUDA) && defined(__CUDACC__)
|
||||
#if defined(MFEM_USE_CUDA)
|
||||
#define MFEM_USE_CUDA_OR_HIP
|
||||
constexpr bool mfem_use_gpu = true;
|
||||
#define MFEM_DEVICE __device__
|
||||
#define MFEM_HOST __host__
|
||||
#define MFEM_LAMBDA __host__
|
||||
#define MFEM_LAUNCH_BOUNDS __launch_bounds__
|
||||
// #define MFEM_HOST_DEVICE __host__ __device__ // defined in config/config.hpp
|
||||
#define MFEM_DEVICE_SYNC MFEM_GPU_CHECK(cudaDeviceSynchronize())
|
||||
#define MFEM_STREAM_SYNC MFEM_GPU_CHECK(cudaStreamSynchronize(0))
|
||||
// Define a CUDA error check macro, MFEM_GPU_CHECK(x), where x returns/is of
|
||||
@@ -40,6 +34,15 @@ constexpr bool mfem_use_gpu = true;
|
||||
} \
|
||||
} while (0)
|
||||
|
||||
// Macros defined only when compiling with CUDA language
|
||||
#if defined(__CUDACC__)
|
||||
#define MFEM_USE_CUDA_OR_HIP_LANG
|
||||
#define MFEM_DEVICE __device__
|
||||
#define MFEM_HOST __host__
|
||||
#define MFEM_LAMBDA __host__
|
||||
#define MFEM_LAUNCH_BOUNDS __launch_bounds__
|
||||
// #define MFEM_HOST_DEVICE __host__ __device__ // defined in config/config.hpp
|
||||
|
||||
// Define the MFEM inner threading macros
|
||||
#if defined(__CUDA_ARCH__)
|
||||
#define MFEM_SHARED __shared__
|
||||
@@ -50,22 +53,30 @@ constexpr bool mfem_use_gpu = true;
|
||||
#define MFEM_FOREACH_THREAD(i,k,N) for(int i=threadIdx.k; i<N; i+=blockDim.k)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT(i,k,N) if(const int i=threadIdx.k; i<N)
|
||||
// Assigns a thread block shaped (SX,SY,SZ) contiguous in x.
|
||||
// Example (3,2,1) block:
|
||||
// 0 (0,0), 1 (1,0), 2 (2,0)
|
||||
// 3 (1,0), 4 (1,1), 5 (2,1)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D(ix, iy, iz, k, SX, SY, SZ) \
|
||||
if (int ix = threadIdx.k % (SX), iy = threadIdx.k / (SX), iz = iy / (SY); \
|
||||
(iy %= (SY)), (threadIdx.k < (SX) * (SY) * (SZ)))
|
||||
// Assigns a thread block shaped (OX,OY,OZ) to work on items (SX,SY,SZ),
|
||||
// contiguous in x. This intentionally offsets threads
|
||||
// contiguous in x. This intentionally offsets threads within the block to avoid
|
||||
// shared memory bank conflicts.
|
||||
// Example (3,2,1) block assigned to work on (2,2,1) items:
|
||||
// 0 (0,0), 1 (1,0), 2 (N/A)
|
||||
// 3 (1,0), 4 (1,1), 5 (N/A)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D_OFFSET(ix, iy, iz, k, SX, SY, SZ, OX, \
|
||||
OY, OZ) \
|
||||
if (int ix = threadIdx.k % (OX), iy = threadIdx.k / (OX), iz = iy / (OY); \
|
||||
(ix < (SX)) && ((iy %= (OY)) < (SY)) && (iz < (SZ)))
|
||||
#endif // defined(__CUDA_ARCH__)
|
||||
#endif // defined(MFEM_USE_CUDA) && defined(__CUDACC__)
|
||||
#endif // defined(__CUDACC__)
|
||||
#endif // defined(MFEM_USE_CUDA)
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
#if defined(MFEM_USE_CUDA) && defined(__CUDACC__)
|
||||
#if defined(MFEM_USE_CUDA)
|
||||
// Function used by the macro MFEM_GPU_CHECK.
|
||||
void mfem_cuda_error(cudaError_t err, const char *expr, const char *func,
|
||||
const char *file, int line);
|
||||
|
||||
+3
-1
@@ -581,7 +581,9 @@ void Device::Setup(const std::string &device_option, const int device_id)
|
||||
if (Allows(Backend::CUDA)) { CudaDeviceSetup(dev, ngpu); }
|
||||
if (Allows(Backend::HIP)) { HipDeviceSetup(dev, ngpu); }
|
||||
if (Allows(Backend::RAJA_CUDA) || Allows(Backend::RAJA_HIP))
|
||||
{ RajaDeviceSetup(dev, ngpu); }
|
||||
{
|
||||
RajaDeviceSetup(dev, ngpu);
|
||||
}
|
||||
// The check for MFEM_USE_OCCA is in the function OccaDeviceSetup().
|
||||
if (Allows(Backend::OCCA_MASK)) { OccaDeviceSetup(dev); }
|
||||
if (Allows(Backend::CEED_MASK))
|
||||
|
||||
@@ -16,6 +16,11 @@
|
||||
#include "globals.hpp"
|
||||
#include "mem_manager.hpp"
|
||||
|
||||
#ifdef MFEM_USE_RAJA
|
||||
#include "RAJA/RAJA.hpp"
|
||||
#endif
|
||||
|
||||
#include <memory>
|
||||
#include <string>
|
||||
|
||||
namespace mfem
|
||||
@@ -266,6 +271,18 @@ public:
|
||||
static inline bool Allows(unsigned long b_mask)
|
||||
{ return Get().backends & b_mask; }
|
||||
|
||||
#if defined(MFEM_USE_RAJA) && \
|
||||
(defined(RAJA_ENABLE_CUDA) || defined(RAJA_ENABLE_HIP))
|
||||
static inline auto GetRajaResource()
|
||||
{
|
||||
#if defined(RAJA_ENABLE_CUDA)
|
||||
return RAJA::resources::Cuda::CudaFromStream(0, Get().GetId());
|
||||
#elif defined(RAJA_ENABLE_HIP)
|
||||
return RAJA::resources::Hip::HipFromStream(0, Get().GetId());
|
||||
#endif
|
||||
}
|
||||
#endif
|
||||
|
||||
/** @brief Get the current Host MemoryType. This is the MemoryType used by
|
||||
most MFEM classes when allocating memory used on the host.
|
||||
*/
|
||||
|
||||
+1
-8
@@ -171,14 +171,7 @@ void mfem_error(const char *msg)
|
||||
#ifdef MFEM_USE_EXCEPTIONS
|
||||
if (mfem_error_action == MFEM_ERROR_THROW)
|
||||
{
|
||||
if (msg)
|
||||
{
|
||||
throw ErrorException(msg);
|
||||
}
|
||||
else
|
||||
{
|
||||
throw ErrorException("");
|
||||
}
|
||||
throw ErrorException(msg ? msg : "");
|
||||
}
|
||||
#endif
|
||||
|
||||
|
||||
+2
-10
@@ -15,7 +15,7 @@
|
||||
#include "../config/config.hpp"
|
||||
#include <iomanip>
|
||||
#include <sstream>
|
||||
#ifdef MFEM_USE_HIP
|
||||
#if defined(MFEM_USE_HIP)
|
||||
#include <hip/hip_runtime.h>
|
||||
#endif
|
||||
|
||||
@@ -153,21 +153,13 @@ void mfem_warning(const char *msg = NULL);
|
||||
|
||||
|
||||
// Additional abort functions for HIP
|
||||
#if defined(MFEM_USE_HIP)
|
||||
#ifndef __HIP_DEVICE_COMPILE__
|
||||
template<typename T>
|
||||
__host__ void abort_msg(T & msg)
|
||||
{
|
||||
MFEM_ABORT(msg);
|
||||
}
|
||||
#else
|
||||
#if defined(__HIP_DEVICE_COMPILE__)
|
||||
template<typename T>
|
||||
__device__ void abort_msg(T & msg)
|
||||
{
|
||||
abort();
|
||||
}
|
||||
#endif
|
||||
#endif
|
||||
|
||||
// Abort inside a device kernel
|
||||
#if defined(__CUDA_ARCH__)
|
||||
|
||||
+36
-38
@@ -317,8 +317,8 @@ template <typename DBODY>
|
||||
void RajaCuWrap1D(const int N, DBODY &&d_body)
|
||||
{
|
||||
//true denotes asynchronous kernel
|
||||
RAJA::forall<RAJA::cuda_exec<MFEM_CUDA_BLOCKS,true>>(RAJA::RangeSegment(0,N),
|
||||
d_body);
|
||||
RAJA::forall<RAJA::cuda_exec<MFEM_CUDA_BLOCKS, true> >(
|
||||
Device::GetRajaResource(), RAJA::RangeSegment(0, N), d_body);
|
||||
}
|
||||
|
||||
template <typename DBODY>
|
||||
@@ -331,9 +331,9 @@ void RajaCuWrap2D(const int N, DBODY &&d_body,
|
||||
using namespace RAJA;
|
||||
using RAJA::RangeSegment;
|
||||
|
||||
launch<cuda_launch_policy>
|
||||
(LaunchParams(Teams(G), Threads(X, Y, BZ)),
|
||||
[=] RAJA_DEVICE (LaunchContext ctx)
|
||||
launch<cuda_launch_policy>(Device::GetRajaResource(),
|
||||
LaunchParams(Teams(G), Threads(X, Y, BZ)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
{
|
||||
|
||||
loop<cuda_teams_x>(ctx, RangeSegment(0, G), [&] (const int n)
|
||||
@@ -349,7 +349,6 @@ void RajaCuWrap2D(const int N, DBODY &&d_body,
|
||||
});
|
||||
|
||||
});
|
||||
|
||||
});
|
||||
|
||||
MFEM_GPU_CHECK(cudaGetLastError());
|
||||
@@ -365,9 +364,9 @@ void RajaCuWrap2DLaunchBounds(const int N, DBODY &&d_body, const int X,
|
||||
using namespace RAJA;
|
||||
using RAJA::RangeSegment;
|
||||
|
||||
launch<cuda_launch_bounds_policy<LB> >
|
||||
(LaunchParams(Teams(G), Threads(X, Y, BZ)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
launch<cuda_launch_bounds_policy<LB> >(
|
||||
Device::GetRajaResource(), LaunchParams(Teams(G), Threads(X, Y, BZ)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
{
|
||||
loop<cuda_teams_x>(ctx, RangeSegment(0, G), [&] (const int n)
|
||||
{
|
||||
@@ -390,13 +389,12 @@ void RajaCuWrap3D(const int N, DBODY &&d_body,
|
||||
using namespace RAJA;
|
||||
using RAJA::RangeSegment;
|
||||
|
||||
launch<cuda_launch_policy>
|
||||
(LaunchParams(Teams(GRID), Threads(X, Y, Z)),
|
||||
[=] RAJA_DEVICE (LaunchContext ctx)
|
||||
launch<cuda_launch_policy>(Device::GetRajaResource(),
|
||||
LaunchParams(Teams(GRID), Threads(X, Y, Z)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
{
|
||||
|
||||
loop<cuda_teams_x>(ctx, RangeSegment(0, N), d_body);
|
||||
|
||||
});
|
||||
|
||||
MFEM_GPU_CHECK(cudaGetLastError());
|
||||
@@ -410,12 +408,10 @@ void RajaCuWrap3DLaunchBounds(const int N, DBODY &&d_body,
|
||||
using namespace RAJA;
|
||||
using RAJA::RangeSegment;
|
||||
|
||||
launch<cuda_launch_bounds_policy<LB> >
|
||||
(LaunchParams(Teams(GRID), Threads(X, Y, Z)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
{
|
||||
loop<cuda_teams_x>(ctx, RangeSegment(0, N), d_body);
|
||||
});
|
||||
launch<cuda_launch_bounds_policy<LB> >(
|
||||
Device::GetRajaResource(), LaunchParams(Teams(GRID), Threads(X, Y, Z)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
{ loop<cuda_teams_x>(ctx, RangeSegment(0, N), d_body); });
|
||||
MFEM_GPU_CHECK(cudaGetLastError());
|
||||
}
|
||||
|
||||
@@ -484,8 +480,8 @@ template <typename DBODY>
|
||||
void RajaHipWrap1D(const int N, DBODY &&d_body)
|
||||
{
|
||||
//true denotes asynchronous kernel
|
||||
RAJA::forall<RAJA::hip_exec<MFEM_HIP_BLOCKS,true>>(RAJA::RangeSegment(0,N),
|
||||
d_body);
|
||||
RAJA::forall<RAJA::hip_exec<MFEM_HIP_BLOCKS, true> >(
|
||||
Device::GetRajaResource(), RAJA::RangeSegment(0, N), d_body);
|
||||
}
|
||||
|
||||
template <typename DBODY>
|
||||
@@ -498,9 +494,9 @@ void RajaHipWrap2D(const int N, DBODY &&d_body,
|
||||
using namespace RAJA;
|
||||
using RAJA::RangeSegment;
|
||||
|
||||
launch<hip_launch_policy>
|
||||
(LaunchParams(Teams(G), Threads(X, Y, BZ)),
|
||||
[=] RAJA_DEVICE (LaunchContext ctx)
|
||||
launch<hip_launch_policy>(Device::GetRajaResource(),
|
||||
LaunchParams(Teams(G), Threads(X, Y, BZ)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
{
|
||||
|
||||
loop<hip_teams_x>(ctx, RangeSegment(0, G), [&] (const int n)
|
||||
@@ -516,7 +512,6 @@ void RajaHipWrap2D(const int N, DBODY &&d_body,
|
||||
});
|
||||
|
||||
});
|
||||
|
||||
});
|
||||
|
||||
MFEM_GPU_CHECK(hipGetLastError());
|
||||
@@ -532,9 +527,9 @@ void RajaHipWrap2DLaunchBounds(const int N, DBODY &&d_body, const int X,
|
||||
using namespace RAJA;
|
||||
using RAJA::RangeSegment;
|
||||
|
||||
launch<hip_launch_bounds_policy<LB> >
|
||||
(LaunchParams(Teams(G), Threads(X, Y, BZ)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
launch<hip_launch_bounds_policy<LB> >(
|
||||
Device::GetRajaResource(), LaunchParams(Teams(G), Threads(X, Y, BZ)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
{
|
||||
loop<hip_teams_x>(ctx, RangeSegment(0, G), [&] (const int n)
|
||||
{
|
||||
@@ -557,13 +552,12 @@ void RajaHipWrap3D(const int N, DBODY &&d_body,
|
||||
using namespace RAJA;
|
||||
using RAJA::RangeSegment;
|
||||
|
||||
launch<hip_launch_policy>
|
||||
(LaunchParams(Teams(GRID), Threads(X, Y, Z)),
|
||||
[=] RAJA_DEVICE (LaunchContext ctx)
|
||||
launch<hip_launch_policy>(Device::GetRajaResource(),
|
||||
LaunchParams(Teams(GRID), Threads(X, Y, Z)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
{
|
||||
|
||||
loop<hip_teams_x>(ctx, RangeSegment(0, N), d_body);
|
||||
|
||||
});
|
||||
|
||||
MFEM_GPU_CHECK(hipGetLastError());
|
||||
@@ -577,12 +571,10 @@ void RajaHipWrap3DLaunchBounds(const int N, DBODY &&d_body, const int X,
|
||||
using namespace RAJA;
|
||||
using RAJA::RangeSegment;
|
||||
|
||||
launch<hip_launch_bounds_policy<LB> >
|
||||
(LaunchParams(Teams(GRID), Threads(X, Y, Z)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
{
|
||||
loop<hip_teams_x>(ctx, RangeSegment(0, N), d_body);
|
||||
});
|
||||
launch<hip_launch_bounds_policy<LB> >(
|
||||
Device::GetRajaResource(), LaunchParams(Teams(GRID), Threads(X, Y, Z)),
|
||||
[=] RAJA_DEVICE(LaunchContext ctx)
|
||||
{ loop<hip_teams_x>(ctx, RangeSegment(0, N), d_body); });
|
||||
MFEM_GPU_CHECK(hipGetLastError());
|
||||
}
|
||||
|
||||
@@ -1052,6 +1044,8 @@ inline void ForallWrap(const bool use_dev, const int N,
|
||||
const int X=0, const int Y=0, const int Z=0,
|
||||
const int G=0)
|
||||
{
|
||||
internal::RequireKernelCompilation();
|
||||
|
||||
MFEM_CONTRACT_VAR(X);
|
||||
MFEM_CONTRACT_VAR(Y);
|
||||
MFEM_CONTRACT_VAR(Z);
|
||||
@@ -1284,6 +1278,9 @@ inline void hypre_forall_cpu(int N, lambda &&body)
|
||||
template<typename lambda>
|
||||
inline void hypre_forall_gpu(int N, lambda &&body)
|
||||
{
|
||||
internal::RequireKernelCompilation();
|
||||
|
||||
#if defined(MFEM_USE_CUDA_OR_HIP_LANG)
|
||||
#if defined(HYPRE_USING_CUDA)
|
||||
CuWrap1D(N, body);
|
||||
#elif defined(HYPRE_USING_HIP)
|
||||
@@ -1291,6 +1288,7 @@ inline void hypre_forall_gpu(int N, lambda &&body)
|
||||
#else
|
||||
#error Unknown HYPRE GPU backend!
|
||||
#endif
|
||||
#endif
|
||||
}
|
||||
#endif
|
||||
|
||||
|
||||
+20
-9
@@ -18,14 +18,8 @@
|
||||
// HIP block size used by MFEM.
|
||||
#define MFEM_HIP_BLOCKS 256
|
||||
|
||||
#if defined(MFEM_USE_HIP) && defined(__HIP__)
|
||||
#if defined(MFEM_USE_HIP)
|
||||
#define MFEM_USE_CUDA_OR_HIP
|
||||
constexpr bool mfem_use_gpu = true;
|
||||
#define MFEM_DEVICE __device__
|
||||
#define MFEM_HOST __host__
|
||||
#define MFEM_LAMBDA __host__ __device__
|
||||
#define MFEM_LAUNCH_BOUNDS __launch_bounds__
|
||||
// #define MFEM_HOST_DEVICE __host__ __device__ // defined in config/config.hpp
|
||||
#define MFEM_DEVICE_SYNC MFEM_GPU_CHECK(hipDeviceSynchronize())
|
||||
#define MFEM_STREAM_SYNC MFEM_GPU_CHECK(hipStreamSynchronize(0))
|
||||
// Define a HIP error check macro, MFEM_GPU_CHECK(x), where x returns/is of
|
||||
@@ -40,6 +34,15 @@ constexpr bool mfem_use_gpu = true;
|
||||
} \
|
||||
} while (0)
|
||||
|
||||
// Macros defined only when compiling with HIP language
|
||||
#if defined(__HIP__)
|
||||
#define MFEM_USE_CUDA_OR_HIP_LANG
|
||||
#define MFEM_DEVICE __device__
|
||||
#define MFEM_HOST __host__
|
||||
#define MFEM_LAMBDA __host__ __device__
|
||||
#define MFEM_LAUNCH_BOUNDS __launch_bounds__
|
||||
// #define MFEM_HOST_DEVICE __host__ __device__ // defined in config/config.hpp
|
||||
|
||||
// Define the MFEM inner threading macros
|
||||
#if defined(__HIP_DEVICE_COMPILE__)
|
||||
#define MFEM_SHARED __shared__
|
||||
@@ -52,19 +55,27 @@ constexpr bool mfem_use_gpu = true;
|
||||
#define MFEM_FOREACH_THREAD_DIRECT(i,k,N) \
|
||||
if(const int i=hipThreadIdx_ ##k; i<N)
|
||||
// Assigns a thread block shaped (SX,SY,SZ) contiguous in x.
|
||||
// Example (3,2,1) block:
|
||||
// 0 (0,0), 1 (1,0), 2 (2,0)
|
||||
// 3 (1,0), 4 (1,1), 5 (2,1)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D(ix, iy, iz, k, SX, SY, SZ) \
|
||||
if (int ix = hipThreadIdx_##k % (SX), iy = hipThreadIdx_##k / (SX), \
|
||||
iz = iy / (SY); \
|
||||
(iy %= (SY)), (hipThreadIdx_##k < (SX) * (SY) * (SZ)))
|
||||
// Assigns a thread block shaped (OX,OY,OZ) to work on items (SX,SY,SZ),
|
||||
// contiguous in x. This intentionally offsets threads
|
||||
// contiguous in x. This intentionally offsets threads within the block to avoid
|
||||
// shared memory bank conflicts.
|
||||
// Example (3,2,1) block assigned to work on (2,2,1) items:
|
||||
// 0 (0,0), 1 (1,0), 2 (N/A)
|
||||
// 3 (1,0), 4 (1,1), 5 (N/A)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D_OFFSET(ix, iy, iz, k, SX, SY, SZ, OX, \
|
||||
OY, OZ) \
|
||||
if (int ix = hipThreadIdx_##k % (OX), iy = hipThreadIdx_##k / (OX), \
|
||||
iz = iy / (OY); \
|
||||
(ix < (SX)) && ((iy %= (OY)) < (SY)) && (iz < (SZ)))
|
||||
#endif // defined(__HIP_DEVICE_COMPILE__)
|
||||
#endif // defined(MFEM_USE_HIP) && defined(__HIP__)
|
||||
#endif // defined(__HIP__)
|
||||
#endif // defined(MFEM_USE_HIP)
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
@@ -550,10 +550,10 @@ void reduce(int N, T &res, B &&body, const R &reducer, bool use_dev,
|
||||
|
||||
int num_mp = Device::NumMultiprocessors(Device::GetId());
|
||||
#if defined(MFEM_USE_CUDA)
|
||||
// good value of mp_sat found experimentally on Lassen
|
||||
// good value of mp_sat found experimentally on Lassen (V100)
|
||||
constexpr int mp_sat = 8;
|
||||
#elif defined(MFEM_USE_HIP)
|
||||
// good value of mp_sat found experimentally on Tuolumne
|
||||
// good value of mp_sat found experimentally on Tuolumne (MI300A)
|
||||
constexpr int mp_sat = 4;
|
||||
#else
|
||||
num_mp = 1;
|
||||
|
||||
+7
-1
@@ -15,6 +15,10 @@
|
||||
#include "backends.hpp"
|
||||
#include "forall.hpp"
|
||||
|
||||
#if defined(MFEM_USE_CUDA_OR_HIP) && !defined(MFEM_USE_CUDA_OR_HIP_LANG)
|
||||
#error "This header requires compilation with CUDA/HIP language!"
|
||||
#else
|
||||
|
||||
#ifdef MFEM_USE_CUDA
|
||||
#include <cub/device/device_scan.cuh>
|
||||
#include <cub/device/device_select.cuh>
|
||||
@@ -406,4 +410,6 @@ void CopyUnique(bool use_dev, InputIt d_in, OutputIt d_out,
|
||||
|
||||
#undef MFEM_CUB_NAMESPACE
|
||||
|
||||
#endif
|
||||
#endif // defined(MFEM_USE_CUDA_OR_HIP) && !defined(MFEM_USE_CUDA_OR_HIP_LANG)
|
||||
|
||||
#endif // MFEM_SCAN_HPP
|
||||
|
||||
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user