Stowell, Mark L.
ef5f729245
Merge remote-tracking branch 'origin/master' into aniso-diffusion-dev
...
# Conflicts:
# fem/bilininteg.hpp
# fem/coefficient.cpp
# fem/coefficient.hpp
# linalg/hypre.cpp
# linalg/hypre.hpp
# linalg/solvers.cpp
# makefile
# miniapps/common/pfem_extras.hpp
# miniapps/electromagnetics/tesla_solver.hpp
2025-03-13 17:43:24 -07:00
Tzanio Kolev
10c0c2da44
Merge pull request #4726 from mfem/blf-print
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Bug fix for printing BilinearForm [blf-print]
2025-03-13 07:50:55 -07:00
Tzanio Kolev
3e769111c2
Update tests/unit/fem/test_bilinearform.cpp
2025-03-13 07:50:02 -07:00
Tzanio Kolev
12f9fbbd89
Merge branch 'master' into blf-print
2025-03-12 13:12:56 -07:00
Tzanio Kolev
2fbc743d47
Merge pull request #4483 from mfem/solver-monitor-controller
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Allow IterativeSolverMonitor to indicate early convergence
2025-03-11 16:19:43 -07:00
Julian Andrej
6470f9aa55
Merge branch 'solver-monitor-controller' of github.com:mfem/mfem into solver-monitor-controller
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# Conflicts:
# CHANGELOG
2025-03-11 15:25:54 -07:00
Julian Andrej
69a08aab26
add changelog
2025-03-11 15:23:58 -07:00
Tzanio Kolev
7415254146
Merge branch 'master' into solver-monitor-controller
2025-03-11 14:21:30 -07:00
Jan Nikl
ada6f722a6
Merge pull request #4733 from mfem/solver-monitor-controller-fix
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Fixed ex19(p) to not duplicate the last printout.
2025-03-10 09:53:59 -07:00
Tzanio Kolev
d9d7ea7557
Merge pull request #4730 from mfem/4729-submesh-fix
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Fix construction of 2D submeshes with internal boundaries [4729-submesh-fix]
2025-03-09 18:59:21 -07:00
Jan Nikl
5dde59d4ae
Fixed ex19(p) to not duplicate the last printout.
2025-03-05 21:01:21 -08:00
Sohail Reddy
cd6d55599c
Merge branch 'master' into blf-print
2025-03-04 16:12:33 -08:00
Sohail Reddy
3d9df1ddf7
minor cosmetic changes
2025-03-04 16:11:44 -08:00
Jan van Dijk
a0cbf383a3
Fix indentation.
2025-03-02 00:26:57 +01:00
Jan van Dijk
1acaa6af3e
Use GetSubMeshEdgeFromParent for 2D meshes.
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In AddBoundaryElements, use GetSubMeshEdgeFromParent(parentFaceIdx), not
GetSubMeshFaceFromParent(parentFaceIdx) for 2D meshes. This fixes an assert
failure/segfault when constructing a submesh with internal boundaries in 2D.
Fixes #4729
2025-03-02 00:14:18 +01:00
Tzanio Kolev
9c162692de
Merge pull request #4452 from mfem/update-gko-cpp-std
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Increase minimum Ginkgo version to 1.9.0
2025-03-01 09:45:55 -08:00
Sohail Reddy
b7f75bdcfa
Merge branch 'master' into blf-print
2025-02-27 11:12:03 -08:00
nbeams
aeefd775ef
Add Google Benchmark to grouped C++ version check in Makefile build
2025-02-27 16:01:22 +00:00
nbeams
9281e125ba
Merge branch 'master' into update-gko-cpp-std
2025-02-27 15:57:21 +00:00
Tzanio Kolev
31a60b4476
Merge pull request #4723 from mfem/google-benchmark
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Update benchmarks
2025-02-27 06:00:54 -08:00
Tzanio Kolev
674e952a28
Merge pull request #4704 from mfem/spiral-transformation
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Spiral transformation
2025-02-27 05:59:49 -08:00
John Camier
3b993a8791
Merge branch 'master' into google-benchmark
2025-02-27 05:29:02 -08:00
Tzanio Kolev
00c88ccfca
Merge pull request #4706 from mfem/tupek/newmark_bugfix
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Address some subtle bugs in the changed Newmark integration method.
2025-02-26 15:54:15 -08:00
Sohail Reddy
a1fcf6ab14
Removed hidden overlead from print in operator
2025-02-26 15:46:14 -08:00
Tzanio Kolev
5dedbda5ac
Merge pull request #4716 from mfem/macos_single_precision
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macos single precision build fix
2025-02-26 15:38:29 -08:00
Sohail Reddy
45dfde0fb7
fixed shadow declaration
2025-02-26 15:06:43 -08:00
Sohail Reddy
16fec0a8ac
fixed ostream in print
2025-02-26 14:52:36 -08:00
Sohail Reddy
5d3945e72e
Added BilinearForm tag to unit test
2025-02-26 14:17:33 -08:00
Sohail Reddy
a2fc578081
Fixed issue with printing BilinearForm and MixedBilinearForm
2025-02-26 14:13:26 -08:00
camierjs
6bcd0ca208
Fix vector BPs
2025-02-25 18:12:20 -08:00
camierjs
b75b58faad
Merge branch 'master' into google-benchmark
2025-02-25 15:51:41 -08:00
camierjs
1b83c64055
google-benchmark now with c++14
2025-02-25 15:40:36 -08:00
nbeams
4606b273d8
Group checks for C++ version in Makefile build;
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ensure Ginkgo C++17 requirement isn't overwritten
2025-02-25 20:11:06 +00:00
Michael Tupek
921b09e9e4
Merge branch 'master' into tupek/newmark_bugfix
2025-02-25 11:57:39 -08:00
John Camier
09bb0a7bbd
Merge branch 'master' into macos_single_precision
2025-02-25 11:41:29 -08:00
Michael Tupek
ba36f8f7df
Update ode.cpp
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Move state increment to be consistent with other second order time integrators.
2025-02-25 11:17:05 -08:00
Veselin Dobrev
8447e62735
Merge pull request #4712 from mfem/fix-4683
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Fix typo in SumIntegrator::AddMultMF / AddMultTransposeMF
2025-02-25 11:12:34 -08:00
Michael Tupek
b55e674f55
Update ode.cpp
...
Trying to guess at failing mfem tests. Having Newmark fixed quickly would be great.
2025-02-25 07:20:19 -08:00
Michael Tupek
65f638f01f
Merge branch 'master' into tupek/newmark_bugfix
2025-02-24 14:53:09 -08:00
Julian Andrej
b5fec915cd
fix the fix
2025-02-24 11:11:04 -08:00
camierjs
a0723083c6
Update CHANGELOG
2025-02-24 09:09:53 -08:00
Ketan Mittal
ba14712ca2
Merge branch 'master' into spiral-transformation
2025-02-23 11:27:00 -08:00
camierjs
2758d32f2e
cmake MFEM_ENABLE_BENCHMARKS all fix
2025-02-23 09:42:06 -08:00
camierjs
768c7a10a1
Update benchmarks
2025-02-23 09:35:50 -08:00
Tzanio Kolev
819d6c7880
Merge pull request #4721 from mfem/suppress-warning-quad-interp
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Suppress a warning from `icpc`
2025-02-22 09:35:28 -08:00
Tzanio Kolev
9b2a92ec93
Merge pull request #4717 from koparasy/export-use-hip-cmake
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Expose MFEM_USE_HIP on cmake
2025-02-22 09:35:01 -08:00
Veselin Dobrev
1ff89e8348
Suppress a warning from 'icpc'
2025-02-21 11:03:08 -08:00
camierjs
31f3ec78dd
Remove extra space
2025-02-20 17:07:47 -08:00
Konstantinos Parasyris
a6841beab6
Merge branch 'master' into export-use-hip-cmake
2025-02-20 16:43:54 -08:00
koparasy
4cd89753b9
Expose MFEM_USE_HIP on cmake
2025-02-20 16:13:30 -08:00
camierjs
b153759440
revert unwanted changes
2025-02-20 12:58:21 -08:00
camierjs
cde249d51e
macos single and distclean fix
2025-02-20 10:52:21 -08:00
Tzanio Kolev
72fd8bac9d
Merge pull request #4669 from mfem/hdiv-quad-interp
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Add support for H(div) spaces in class QuadratureInterpolator
2025-02-20 08:59:45 -08:00
Tzanio Kolev
493120efb3
Merge pull request #4707 from mfem/tmop-skew-restore
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Restore TMOP skew metric
2025-02-20 08:20:01 -08:00
Veselin Dobrev
a183be3ca0
Merge branch 'master' into hdiv-quad-interp
2025-02-19 18:40:48 -08:00
Veselin Dobrev
d272b9e181
Added a bullet to CHANGELOG about H(div) support in QuadratureInterpolator
2025-02-19 18:25:18 -08:00
Veselin Dobrev and Tzanio Kolev
f0b72c3714
Apply suggestions from code review
...
Co-authored-by: Tzanio Kolev <tzanio@llnl.gov >
2025-02-19 18:02:22 -08:00
Tzanio Kolev
d17f75a8b4
Merge pull request #4646 from mfem/fa-mesh-connectivity
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Support full assembly on highly connected meshes
2025-02-19 13:51:17 -08:00
nbeams
8058cb0838
Increase minimum Ginkgo version to 1.9.0
2025-02-19 16:13:36 +00:00
Tzanio Kolev
2d8fface64
Merge pull request #4675 from mfem/bltp
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BlockLowerTriangularPreconditioner GPU support
2025-02-18 14:49:51 -08:00
Michael Tupek
a360e2a860
Merge pull request #4713 from mfem/tupek/newmark_bugfix-patch
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Suggestion for PR 4706 to fix bug identified in that PR
2025-02-18 13:02:27 -08:00
Mittal, Ketan
7195563387
update CHANGELOG
2025-02-18 11:55:15 -08:00
Christopher vogl
9edb7b5a75
fix to address bug affecting NewmarkSolver and GeneralizedAlpha2Solver
2025-02-18 11:49:13 -08:00
Christopher vogl
741638cb9b
Revert "Address some subtle bugs in the changed Newtmark integration method."
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This reverts commit cdc4a92c57 .
2025-02-18 11:36:03 -08:00
Justin Laughlin
ffbc04777f
Fix typo in SumIntegrator::AddMultMF / AddMultTransposeMF
2025-02-18 09:26:38 -08:00
Mittal, Ketan
3eabf0746b
make style
2025-02-17 15:51:40 -08:00
camierjs
87aacf79c1
CHANGELOG update
2025-02-16 14:44:08 -08:00
John Camier
c907f84265
Merge branch 'master' into bltp
2025-02-15 10:15:26 -08:00
Mittal, Ketan
8233a2ea14
make style
2025-02-14 15:34:52 -08:00
Mittal, Ketan
a48c16b424
Add AD for skew2D metric
2025-02-14 15:33:33 -08:00
Mittal, Ketan
9b5003026b
restore skew metric
2025-02-14 15:22:49 -08:00
Michael Tupek
cdc4a92c57
Address some subtle bugs in the changed Newtmark integration method.
2025-02-14 13:07:23 -08:00
Mittal, Ketan
9f11cb489c
minor
2025-02-14 11:50:19 -08:00
Mittal, Ketan
8e5ea695d5
initial commit
2025-02-14 11:28:53 -08:00
Tzanio Kolev
9f3d67e45f
Merge pull request #3605 from mfem/debug-device-test
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Update debug unit test with SIGBUS error
2025-02-13 07:51:52 -08:00
Julian Andrej
eae2eae657
remove lbfgs monitor
2025-02-12 11:28:20 -08:00
Julian Andrej and Jan Nikl
23bce015d9
Update linalg/solvers.cpp
...
Co-authored-by: Jan Nikl <nikl1@llnl.gov >
2025-02-12 10:59:44 -08:00
Julian Andrej
d8f489013b
added final monitor calls to common solver implementation
2025-02-12 09:57:07 -08:00
Julian Andrej
b3c333df22
Merge branch 'solver-monitor-controller' of github.com:mfem/mfem into solver-monitor-controller
2025-02-12 09:45:42 -08:00
Julian Andrej
3b24d0d7cf
removed wrong converged flag
2025-02-12 09:45:16 -08:00
camierjs
f62a2f100f
Move HostRead outside of bilininteg
2025-02-11 11:34:51 -08:00
John Camier
67e4bb4355
Merge branch 'master' into debug-device-test
2025-02-11 09:42:32 -08:00
John Camier
dc4e51b61c
Merge branch 'master' into bltp
2025-02-11 09:42:22 -08:00
Tzanio Kolev
c001fb4303
Merge pull request #4680 from mfem/hughcars/missing-override
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Fix missing override on STRUMPKACKSolverBase::ArrayMult
2025-02-11 07:36:24 -08:00
John Camier
ea31648a9c
Merge branch 'master' into debug-device-test
2025-02-10 05:05:46 -08:00
John Camier
bc650c0bcc
Merge branch 'master' into bltp
2025-02-10 05:05:34 -08:00
Tzanio Kolev
2d31636115
Merge pull request #4670 from mfem/ex40_update
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Updates to ex40
2025-02-08 17:10:35 -08:00
Brendan Keith
315bbd1b0d
Merge branch 'master' into ex40_update
2025-02-08 15:21:01 -05:00
camierjs
6b7b9985e7
Merge branch 'master' into bltp
2025-02-06 20:21:29 -08:00
camierjs
bc56be2092
Replace GetIJData with HostReads
2025-02-06 20:21:21 -08:00
Veselin Dobrev
c87ded944f
Merge pull request #4651 from adam-sim-dev/cpardiso_iparm41
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Set correct value for cpardiso iparm[41]
2025-02-06 00:07:38 -08:00
Tzanio Kolev
feb1989879
Merge branch 'master' into update-gko-cpp-std
2025-02-04 14:55:15 -08:00
Tzanio Kolev
bd48e8e4b9
Merge branch 'master' into fa-mesh-connectivity
2025-02-04 14:54:52 -08:00
Tzanio Kolev
8669338cca
Merge branch 'master' into solver-monitor-controller
2025-02-04 14:53:17 -08:00
camierjs
21c693ec7e
Update copyright to 2010-2025
2025-02-04 13:01:23 -08:00
John Camier
5df9fa2539
Merge branch 'master' into debug-device-test
2025-02-04 12:54:25 -08:00
camierjs
999d6e9e94
Merge branch 'master' into bltp
2025-02-04 12:53:53 -08:00
Tzanio Kolev
4c60cac99c
Merge branch 'master' into cpardiso_iparm41
2025-02-04 12:52:11 -08:00
Tzanio Kolev
e2da2103df
Merge pull request #4682 from mfem/2025-copyright
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Update COPYRIGHT to 2010-2025
2025-02-04 12:50:48 -08:00
Brendan Keith
f3a54176be
remove A11 from ex40
2025-02-04 14:02:59 -05:00
camierjs
e9a12955e2
Merge branch 'master' into bltp
2025-02-04 10:32:50 -08:00
camierjs
ea041467ae
Address reviewers comments
2025-02-04 10:32:44 -08:00
Julian Andrej
9dfd486f55
move monitor call into if condition in bicgstab
2025-02-04 08:53:39 -08:00
Tzanio Kolev
e4c2152419
Update Copyright to 2010-2025
2025-02-03 12:17:26 -08:00
Tzanio Kolev
c9db272586
Merge pull request #4557 from david-kamensky/david/integ-base
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Integrator base class unifying logic for selecting IntegrationRule
2025-02-03 11:03:53 -08:00
David Kamensky
ae117fa580
Merge branch 'master' into david/integ-base
2025-02-03 10:35:40 -08:00
David Kamensky
ee0e35c94b
Updating CHANGELOG with note about Integrator base class.
2025-02-03 11:18:24 -07:00
Hugh Carson
35abd32129
Fix missing override on STRUMPKACKSolverBase::ArrayMult
2025-02-03 10:57:47 -05:00
John Camier
3ed10c0114
Merge branch 'master' into bltp
2025-01-31 14:18:24 -08:00
Brendan Keith
7c0074dd14
Merge branch 'master' into ex40_update
2025-01-31 14:38:44 -05:00
adam-sim-dev
e27d97b292
Merge branch 'master' into cpardiso_iparm41
2025-01-31 18:28:44 +08:00
camierjs
9f94279247
Fix real_t vs double
2025-01-30 16:06:44 -08:00
John Camier
68690e1ff7
Merge branch 'master' into debug-device-test
2025-01-30 13:30:44 -08:00
Veselin Dobrev
a0c3bdc93e
Merge pull request #4652 from mfem/spiral-dev
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😵💫 New toy miniapp: Spiral
2025-01-30 11:13:19 -08:00
Veselin Dobrev
2a1dd3d9c2
Merge pull request #4610 from lindsayad/netcdf-name-support
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Allow reading exodus block/boundary names into corresponding attribute sets
2025-01-30 11:11:03 -08:00
Tzanio Kolev
2277c3729f
Merge pull request #4637 from mfem/mesh-explorer-elem-fix
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Fix element visualization in Mesh Explorer
2025-01-30 07:49:17 -08:00
Tzanio Kolev
afb7aaa2a5
Merge pull request #4630 from mfem/mark-external-faces-dev
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Experimental solution to BC selection issue in ex1 and ex1p [mark-external-faces-dev]
2025-01-30 07:48:38 -08:00
Tzanio Kolev
34cb75622a
Merge pull request #4484 from mfem/hughcars/gmsh-reader-periodic-bugfix
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Do not remove internal boundaries when loading a gmsh periodic mesh
2025-01-30 07:47:40 -08:00
camierjs
27c526578d
Use device vectors in solvers
2025-01-29 11:45:24 -08:00
camierjs
eef7f76109
Merge master in bltp
2025-01-29 09:00:30 -08:00
adam-sim-dev
3048309467
Apply the reviewer's suggestion
2025-01-29 17:24:20 +08:00
adam-sim-dev
c5d2b70bd8
Merge branch 'master' into cpardiso_iparm41
2025-01-29 17:17:40 +08:00
camierjs
b033a91ce1
Cleanup & style
2025-01-28 16:46:09 -08:00
Jan Nikl
2d998865be
Merge branch 'master' into solver-monitor-controller
2025-01-28 16:39:24 -08:00
camierjs
4e16e5edd1
Add block operators tests
2025-01-28 16:29:36 -08:00
Julian Andrej
861d3d1422
rename and other reviewer comments
2025-01-28 13:53:12 -08:00
Stowell, Mark L.
5dc85da306
Updating CHANGELOG with notices of the new methods
2025-01-28 11:46:56 -08:00
Tzanio Kolev
3f810f3591
Merge pull request #4649 from mfem/face-geom-jacobians
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Compute derivatives in FaceQuadratureInterpolator, compute Jacobian matrices in FaceGeometricFactors
2025-01-28 11:35:26 -08:00
camierjs
7dd6305d34
Init bltp miniapp from incompressible
2025-01-28 10:39:18 -08:00
Mark L. Stowell and Veselin Dobrev
b60df76e98
Update mesh/mesh.cpp
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Co-authored-by: Veselin Dobrev <v-dobrev@users.noreply.github.com >
2025-01-28 10:21:33 -08:00
Tzanio Kolev
21537ec6c6
Separate array for element partitioning in Mesh Explorer
2025-01-27 18:05:16 -08:00
David Kamensky
5ba722dd2f
Adding a link to Integrator::SetIntRule in the documentation for Integrator::SetIntegrationRule.
2025-01-27 16:56:25 -07:00
adam-sim-dev
53f9bf05a6
Merge branch 'master' into cpardiso_iparm41
2025-01-27 21:45:42 +08:00
David Kamensky
4a9a6e3ba3
Avoiding assignment in conditional to fix debug build.
2025-01-24 09:34:56 -07:00
David Kamensky
c4e672c71a
Keep IntRule and patchRules mutually exclusive through setter methods and update documentation.
2025-01-24 09:15:36 -07:00
Stowell, Mark L.
7bb9027c82
Changes suggested by v-dobrev
2025-01-23 15:46:20 -08:00
Tzanio Kolev
7150b9e9bd
Merge pull request #4668 from dect-cf/master
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Fix bug in KnotVector initialization to enable nonopen knot vectors
2025-01-22 17:40:00 -08:00
Tzanio Kolev
2105441b2c
Merge pull request #4598 from mfem/fes-move-dim-fns-dev
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Move VectorDim, CurlDim to FiniteElementSpace (Redo)
2025-01-22 17:39:32 -08:00
David Kamensky and Justin Laughlin
55dc0f4b97
Fix typo in Doxygen comment.
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Co-authored-by: Justin Laughlin <justinglaughlin@gmail.com >
2025-01-22 16:16:44 -08:00
Stowell, Mark L.
4de1e1bad3
Altering examples code comments as per Tzanio's suggestion
2025-01-22 09:49:29 -08:00
Mark L. Stowell
dfec0c0281
Merge branch 'master' into mark-external-faces-dev
2025-01-22 09:40:33 -08:00
Stowell, Mark L.
61d4d6bbc2
Renaming "Remove" -> "Unmark"
2025-01-21 20:26:41 -08:00
Stowell, Mark L.
e2ed642f5b
Correcting the comments in the examples
2025-01-21 20:26:17 -08:00
Stowell, Mark L.
0656bc02cf
Merge branches 'mark-external-faces-dev' and 'mark-external-faces-dev' of github.com:mfem/mfem into mark-external-faces-dev
2025-01-21 16:36:04 -08:00
Stowell, Mark L.
5b002f9452
Using the new MarkExternalBoundary methods in ex1, ex1p, and ex11p
2025-01-21 15:47:31 -08:00
Stowell, Mark L.
f65afa6f7b
Modifying behavior of MarkExternalBoundaries and adding named set versions (un)mark methods
2025-01-21 15:46:47 -08:00
Stowell, Mark L.
72dc6dd9df
Adding "const" versions of select attribute set methods
2025-01-21 15:45:49 -08:00
Hugh Carson
d4b8071871
Merge remote-tracking branch 'origin/master' into hughcars/gmsh-reader-periodic-bugfix
2025-01-21 15:02:44 -05:00
Will Pazner
006e348182
Merge remote-tracking branch 'origin/master' into face-geom-jacobians
2025-01-21 11:51:36 -08:00
Will Pazner
f280d43ac9
Remove unneeded check in FaceQuadratureInterpolator
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Derivatives are now supported. Also, the check was buggy, it should have been
!(eval_flags & DERIVATIVES)
2025-01-21 11:51:27 -08:00
Will Pazner
abe37e5ed7
Remove unneeded check if non-null
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FiniteElementSpace::GetTypicalFE always returns non-null pointer
2025-01-21 11:11:21 -08:00
David Kamensky
d9fef7f574
Avoiding unnecessary dynamic cast in Integrator::GetIntegrationRule; minor adjacent formatting changes.
2025-01-21 08:59:12 -07:00
Tzanio Kolev
65585868a7
Merge pull request #4572 from mfem/bugfix-4570
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Bug in VectorDiffusionIntegrator::AssembleElementVector.
2025-01-21 07:14:12 -08:00
Tzanio Kolev
0e0b81d87f
Merge pull request #4657 from mfem/device_info
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added helper functions for querying various device properties
2025-01-21 07:13:15 -08:00
adam-sim-dev
b471f44bec
Merge branch 'master' into cpardiso_iparm41
2025-01-20 08:42:07 +08:00
Veselin Dobrev
e04f56db3f
Add a unit test for H(div) evaluations with QuadratureInterpolator.
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Add triangle and tet meshes in the unit test for H1 evaluations with
QuadratureInterpolator; also, switch to checking relative norms of the
errors.
2025-01-19 16:10:26 -08:00
Brendan Keith
22b182e4ca
style
2025-01-19 13:58:58 -05:00
Brendan Keith
e853ef0ee3
switch to MINRES and add safeguards to parallel version
2025-01-19 13:58:11 -05:00
Veselin Dobrev
ba9f282df7
Suppress a doxygen warning
2025-01-17 18:19:44 -08:00
Veselin Dobrev
d6beffe42e
In class QuadratureInterpolator, add a new EvalFlags option for
...
vector fields: PHYSICAL_MAGNITUDES. The option is implemented only
for H(div) spaces.
2025-01-17 18:08:00 -08:00
Veselin Dobrev
811a498fe5
Add support for H(div) spaces in class QuadratureInterpolator.
...
For now, only evaluation of vector values (reference or physical)
on quad and hex elements is supported.
The code still needs to be tested.
2025-01-17 13:39:57 -08:00
David Kamensky
56bc30fa75
Changing const pointer arguments to Integrator::Get(Default)IntegrationRule to const references.
2025-01-17 13:23:40 -07:00
Brendan Keith
e88b2d7723
update ex40 to match paper
2025-01-17 15:17:08 -05:00
Mark L. Stowell
0d306df7ec
Merge branch 'master' into mark-external-faces-dev
2025-01-17 09:48:45 -08:00
dect-cf
60aea56a1d
Merge branch 'master' into master
2025-01-17 09:34:44 -07:00
David Kamensky
f13d975c21
Adding @brief to short Doxygen comments in integrator.hpp.
2025-01-17 09:17:32 -07:00
Tzanio Kolev
a496df4734
Merge pull request #4522 from mfem/TMOP_AD_ms
...
AD implementation for selected TMOP metrics
2025-01-17 07:56:12 -08:00
Derek Thomas
5b1171aae9
Fix bug in alternate KnotVector initialization to enable nonopen knot vectors
2025-01-17 05:54:52 +00:00
Philipp Dumitrescu
8ce411f481
Restore GetTypicalFE changes; tweak comments
2025-01-16 16:21:13 -08:00
Stowell, Mark L.
bd3d1b6dcc
ex1p showing four proposed solutions
2025-01-16 15:54:11 -08:00
Stowell, Mark L.
7d7ec1fa6a
Bug fixes
2025-01-16 15:52:18 -08:00
Stowell, Mark L.
c42fd1ccd5
Adding remove_interior option to suggested (Par)FiniteElementSpace methods
2025-01-16 14:49:29 -08:00
Will Pazner
350c2c1281
Reduce memory usage in ElementRestriction FillI and FillJAndData
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Use offsets array to handle mesh connectivity; computing maximum mesh
connectivity is not required.
2025-01-16 12:21:56 -08:00
Will Pazner
7e59798592
Merge remote-tracking branch 'origin/master' into fa-mesh-connectivity
2025-01-16 12:20:36 -08:00
Stowell, Mark L.
7e1884ca65
Merge remote-tracking branch 'origin/master' into mark-external-faces-dev
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# Conflicts:
# mesh/mesh.cpp
2025-01-16 11:04:22 -08:00
adam-sim-dev
687902dd97
Merge branch 'master' into cpardiso_iparm41
2025-01-16 12:38:48 +08:00
Stowell, Mark L.
3ac922ac32
Using new functions in ex1 and ex1p
2025-01-15 17:18:45 -08:00
Stowell, Mark L.
e09decae30
Adding suggested functions to ParMesh class
2025-01-15 16:55:58 -08:00
Stowell, Mark L.
2e326c97bf
Adding recommended functions to Mesh class
2025-01-15 16:37:05 -08:00
Philipp Dumitrescu
c0ad0924cd
Merge branch 'master' into fes-move-dim-fns-dev
2025-01-15 16:35:18 -08:00
Tzanio Kolev
109b2f3eb3
Merge pull request #4513 from mfem/najlkin/impro-hyperbolic
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Improvements of general hyperbolic framework
2025-01-15 07:10:03 -08:00
Tzanio Kolev
2dddad5381
Merge pull request #4574 from lindsayad/petsc-container-ctx-update
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PetscContainerSetUserDestroy -> PetscContainerSetCtxDestroy
2025-01-15 07:08:14 -08:00
Tzanio Kolev
2fdac5753b
Merge pull request #4621 from mfem/cmake-petsc-config-fix
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CMake: fix an issue when finding PETSc
2025-01-15 07:07:45 -08:00
Andrew Ho and Veselin Dobrev
5c53d66dc4
Update general/device.hpp
...
Co-authored-by: Veselin Dobrev <v-dobrev@users.noreply.github.com >
2025-01-13 08:32:50 -08:00
Andrew Ho and Veselin Dobrev
dfb72d01f6
Update general/device.hpp
...
Co-authored-by: Veselin Dobrev <v-dobrev@users.noreply.github.com >
2025-01-13 08:32:37 -08:00
adam-sim-dev
7b6750fe38
Merge branch 'master' into cpardiso_iparm41
2025-01-13 12:09:10 +08:00
Alex Lindsay
dd8c1241a5
Add netcdf read capability for boundary ids-name pairs
2025-01-09 17:38:09 -07:00
Andrew Ho
db323179f1
Merge branch 'master' into device_info
2025-01-09 14:41:57 -08:00
Andrew Ho
4983d81eb9
removed cuda < 10 since MFEM doesn't support this anyways
2025-01-09 14:40:08 -08:00
Andrew Ho
13b9e14526
Moved implementations to cpp file
...
removed host/device since this could lead to some ODR violations
2025-01-09 14:28:15 -08:00
Tzanio Kolev
7324c70027
Merge branch 'master' into najlkin/impro-hyperbolic
2025-01-09 02:20:52 -08:00
Vladimir Z Tomov
3bb7b0bcfe
Merge branch 'master' into TMOP_AD_ms
2025-01-08 18:14:21 -08:00
Vladimir Z Tomov
6932e2038f
changelog, changed a sample run.
2025-01-08 18:13:44 -08:00
Vladimir Z Tomov
dbbb7b6b5d
minor
2025-01-08 15:15:39 -08:00
Veselin Dobrev
e7cf9fb5ac
Merge pull request #4650 from mfem/actions-concurrency
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Use 'concurrency' in GitHub CI instead of external action
2025-01-08 14:28:35 -08:00
Vladimir Z Tomov
15accf0271
minor
2025-01-08 12:47:35 -08:00
Vladimir Z Tomov
47afa5868b
Merge branch 'actions-concurrency' into TMOP_AD_ms
2025-01-08 12:04:46 -08:00
Ketan Mittal
7fe2ba5e92
Merge branch 'master' into TMOP_AD_ms
2025-01-08 10:34:31 -08:00
Mittal, Ketan
ae033ff089
minor
2025-01-08 10:32:19 -08:00
Mittal, Ketan
2f09f46776
add 3D VOS metric mu_342
2025-01-08 10:25:38 -08:00
Tzanio Kolev
09d9b0b1de
Merge pull request #4619 from mfem/tmop-bg-bug
...
TMOP correction for background grids
2025-01-07 17:14:15 -08:00
Tzanio Kolev
99958b1c67
Merge pull request #4260 from mfem/pa-empty-partitions
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Better support for PA with empty mesh partitions
2025-01-07 17:13:41 -08:00
Tzanio Kolev
7c78f98552
Merge pull request #4647 from mfem/getenv-wrapper
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Rename getenv wrapper to GetEnv
2025-01-07 17:13:00 -08:00
Jan Nikl
6c2f6a9e7f
Fixed typo.
2025-01-07 14:33:59 -08:00
Andrew Ho
96a0320f2c
typo
2025-01-07 10:47:41 -08:00
Andrew Ho
04b09171dc
documentation
2025-01-07 10:44:14 -08:00
Will Pazner
97bbd21b16
Fix YAML error in build analysis workflow
2025-01-07 09:31:45 -08:00
Will Pazner
810eb3dc09
Explicitly specify Ubuntu and clang version in sanitizer action
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Also remove temporary workaround that is not needed on the newer Ubuntu runner.
2025-01-07 09:19:22 -08:00
Andrew Ho
6e1101f058
added helper functions for querying various device properties
2025-01-06 18:33:23 -08:00
Mittal, Ketan
9b4086319a
minor
2025-01-06 14:45:43 -08:00
Mittal, Ketan
e3e0eccc86
remove fd-based sample runs
2025-01-06 14:39:56 -08:00
Mittal, Ketan
caa7ff4a95
minor
2025-01-06 13:18:17 -08:00
Mittal, Ketan
e1c1fcc3fa
simplify logic to remove duplication in metric definition for AD
2025-01-06 11:38:59 -08:00
David Kamensky
c4e853a8ee
Favoring GetIntRule over zero-argument GetIntegrationRule as direct accessor for IntRule.
2025-01-06 11:06:42 -07:00
David Kamensky
07db30222c
Minor cosmetic changes: consistent const style, GetIntRule calls GetIntegrationRule, removing excess blank lines.
2025-01-06 09:06:49 -07:00
Tzanio Kolev
b521859413
Uninitialized variables
2025-01-03 20:08:47 -08:00
Tzanio Kolev
88ae946755
Spiral: Added a note about mfem/data
2025-01-03 19:35:45 -08:00
Tzanio Kolev
d9758bd216
New toy miniapp: Spiral
2025-01-03 19:32:24 -08:00
David Kamensky
3e0c373ee2
Formatting; replacing some overloads with default parameters; documentation updates.
2025-01-03 17:35:21 -07:00
Vladimir Z Tomov
c6bbe85b21
Moved the implementations to EvalWMatrixForm()
...
since all new metrics are evaluated through their matrix forms.
2025-01-03 16:12:29 -08:00
Jan Nikl
837333b88a
Renamed Godunov flux to upwinded flux.
2025-01-03 13:03:53 -08:00
David Kamensky
b249a4de62
Wrapping some existing GetRule methods of Integrator subclasses with overrides of Integrator::GetDefaultIntegrationRule.
2025-01-03 13:30:58 -07:00
Jan Nikl
72de1e5d50
Elaborated dox of RusanovFlux.
2025-01-03 11:55:19 -08:00
David Kamensky
5bcba26e08
Additional minor changes requested during review.
2025-01-03 12:49:25 -07:00
Will Pazner
6ddea3ff47
Merge remote-tracking branch 'origin/master' into pa-empty-partitions
2025-01-03 09:36:06 -08:00
Ketan Mittal
e97ff1222e
Merge branch 'master' into tmop-bg-bug
2025-01-03 09:35:11 -08:00
Will Pazner
697c21aa7e
Add more tests directories to 'make style'
2025-01-03 09:34:29 -08:00
Will Pazner
78e593bea1
Ensure meshgen is set on empty ranks
2025-01-03 09:32:23 -08:00
Will Pazner
d85c8fb65a
Revert unnecessary changes in kdtree.cpp
2025-01-03 09:31:56 -08:00
Ketan Mittal
178a4db5c8
Merge branch 'master' into TMOP_AD_ms
2025-01-03 09:12:36 -08:00
adam-sim-dev
1e5e3779bd
Set correct value for iparm[41]
2025-01-03 10:35:32 +08:00
Mittal, Ketan
dc241f8298
reviewer comments
2025-01-02 15:49:26 -08:00
Veselin Dobrev
701d3875c5
Merge pull request #4643 from mfem/array-move-ctor-fix
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Array move constructor fix
2025-01-02 12:00:34 -08:00
Will Pazner
3bdbfb51f9
Don't explicitly specify clang version in sanitizer CI
2025-01-01 08:40:25 -08:00
Will Pazner
8d254f488e
Use 'concurrency' in GitHub CI instead of external action
...
This is a built-in way to limit the CI to one job per workflow (canceling
previous runs).
2025-01-01 08:24:33 -08:00
Alex Lindsay
92e927ccf8
Add .vscode dir to .gitignore
2024-12-31 16:00:00 -07:00
Alex Lindsay
b8a120ec3e
Add unit test
2024-12-31 16:00:00 -07:00
Vladimir Z Tomov
d10c9f7952
Merge branch 'master' into tmop-bg-bug
2024-12-31 14:54:09 -08:00
Alex Lindsay
50f5fcc42e
Apply style
2024-12-31 12:33:42 -07:00
Alex Lindsay
4d5054c197
Change assert message
2024-12-31 12:33:42 -07:00
Alex Lindsay
845ff55e3f
Exodus at least only ever writes NC_CHAR
2024-12-31 12:33:42 -07:00
Alex Lindsay
ecfee97b37
Apparently working implementation for var_type == NC_CHAR
2024-12-31 12:33:42 -07:00
Alex Lindsay
8eaae0ff87
Read block names in NetCDF and add to attribute sets
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Refs #4602
2024-12-31 12:33:42 -07:00
Will Pazner
0345861c6f
Compute derivatives in FaceQuadratureInterpolator, compute Jacobian matrices in FaceGeometricFactors
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Also add "Face geometric factor Jacobians" unit test
2024-12-31 09:32:12 -08:00
Vladimir Z Tomov
01d57ee7f8
minor
2024-12-28 20:57:02 -08:00
Vladimir Z Tomov
900385e06d
minor
2024-12-28 20:45:52 -08:00
Vladimir Z Tomov
678d44a01e
Merge branch 'master' into TMOP_AD_ms
2024-12-28 20:19:36 -08:00
Vladimir Z Tomov
bf312430a7
style
2024-12-28 20:18:56 -08:00
Vladimir Z Tomov
f35689d7bc
Added all new metrics to tmop-check-metric.
2024-12-28 19:26:09 -08:00
Tzanio Kolev
df18bedc02
Merge branch 'master' into fa-mesh-connectivity
2024-12-27 22:02:37 -08:00
Tzanio Kolev
c45b3ef3ee
Merge pull request #4578 from mfem/positive-lp-err-dev
...
Returning positive errors from GridFunction::ComputeLpError etc...
2024-12-27 22:00:49 -08:00
Tzanio Kolev
598413e2fc
Merge pull request #4635 from mfem/bug-fix-par-green-ref-2d
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Bug-Fix: Parallel Green Refinement in 2D
2024-12-27 21:59:37 -08:00
Tzanio Kolev
81cf9ed9a1
Merge pull request #4603 from adam-sim-dev/operator_equal
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operator= for (Par)ComplexLinearForm
2024-12-27 21:59:05 -08:00
Will Pazner
33efde9e81
Add Doxygen comment for GetEnv
2024-12-26 21:33:27 -08:00
Will Pazner
19a1750527
Rename getenv wrapper to GetEnv
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Also use getenv wrapper in KernelReporter
2024-12-26 16:55:45 -08:00
Will Pazner
761be16003
Support full assembly on highly connected meshes
...
Instead of using a constant estimate for the maximum mesh valence (16 by
default), compute the maximum mesh connectivity, and use global memory in
ElementRestriction::FillI and ElementRestriction::FillJAndData to store the
arrays needed to deduplicate assembly.
Adds a unit test with highly connected meshes.
2024-12-26 11:17:00 -08:00
Will Pazner
d08c019d4c
Avoid initializing data twice in Array constructors
2024-12-24 18:19:37 -08:00
Will Pazner
1deaa1cb57
Add Memory constructor given host MemoryType
2024-12-24 18:19:37 -08:00
Will Pazner
e69ad849ff
Ensure *this is initialized in Array move constructor
2024-12-24 18:19:37 -08:00
Alex Lindsay
49450e3db7
Switch to PETSC_VERSION_LT
2024-12-23 16:56:35 -07:00
David Kamensky
14255ad4f4
Shortening some lines.
2024-12-23 08:49:22 -07:00
Tzanio Kolev
d9850f4baa
minor
2024-12-22 10:38:53 -08:00
Tzanio Kolev
4219887355
Added helpful information for GLVis visualization of mesh elements in Mesh Explorer
2024-12-22 10:36:07 -08:00
Tzanio Kolev
f51d715503
Fix element visualization in Mesh Explorer
2024-12-21 19:48:21 -08:00
Stowell, Mark L.
3d35c66864
Removing unused doxygen anchor
2024-12-21 16:40:59 -08:00
Stowell, Mark L.
b626908505
Expanding explanation of Coefficient array arguments
2024-12-21 16:40:39 -08:00
Stowell, Mark L.
8b95b3353b
Expanding explanation of integration rule argument
2024-12-21 16:40:04 -08:00
Stowell, Mark L.
bc2b87e891
Adding the negative quadrature note in a few places where it was missed
2024-12-21 16:36:42 -08:00
Stowell, Mark L.
e01407f82b
Applying doxygen reference fix in other locations
2024-12-20 18:26:42 -08:00
Stowell, Mark L.
88a10cb42b
Attempting to fix doxygen reference error
2024-12-20 18:22:12 -08:00
Stowell, Mark L.
17cd445e8b
Fixing shadowed variable error
2024-12-20 17:36:56 -08:00
Stowell, Mark L.
20fce49843
Attempting to fix deprecation error
2024-12-20 17:29:21 -08:00
Stowell, Mark L.
c53f1c9188
Attempting to fix Doxygen error
2024-12-20 17:29:07 -08:00
Stowell, Mark L.
085f779379
Trying another way to bypass a deprecation error
2024-12-20 17:24:52 -08:00
Stowell, Mark L.
48ce125336
Moving implementation involving newly deprecated function to avoid compiler errors
2024-12-20 17:00:52 -08:00
Stowell, Mark L.
2bbdafa9f4
Adding CHANGELOG entry
2024-12-20 17:00:05 -08:00
Stowell, Mark L.
76fd3575d1
Adding documentation to parallel Compute*Error methods
2024-12-20 16:47:35 -08:00
adam-sim-dev
b22b2158bf
Merge branch 'master' into operator_equal
2024-12-21 08:03:29 +08:00
Stowell, Mark L.
a1c279ee79
Cleaning up LaTeX and link errors
2024-12-20 15:02:37 -08:00
Mark L. Stowell
a1429e80e2
Merge branch 'positive-lp-err-dev' of github.com:mfem/mfem into positive-lp-err-dev
2024-12-19 17:30:16 -08:00
Mark L. Stowell
8bfa001844
style adjustment
2024-12-19 17:28:22 -08:00
Mark L. Stowell
3230923742
Adding documentation for Sobolev norms
2024-12-19 17:27:54 -08:00
Mark L. Stowell
5038e96f34
Adding documentation for Max norms
2024-12-19 17:27:22 -08:00
Mark L. Stowell
c421146f47
Documenting element-wise error functions
2024-12-19 13:24:18 -08:00
Mark L. Stowell
86336f1c51
Adding documentation for L1 and W11 error computations
2024-12-19 11:45:45 -08:00
Mark L. Stowell
699bb4d422
Fixing typos
2024-12-19 11:45:13 -08:00
Mark L. Stowell
ce0bda7a35
Ensuring positive integrals in GridFunction::ComputeW11Error
2024-12-19 10:50:49 -08:00
Veselin Dobrev
e2a20d381c
Merge pull request #4624 from LeSnow-Ye/patch-1
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CMake: fix `mpi.h` not being found when finding SLEPc.
2024-12-18 16:46:54 -08:00
adam-sim-dev
1f38748b11
Merge branch 'master' into operator_equal
2024-12-19 04:49:36 +08:00
Mark L. Stowell
42300d0fca
Merge branch 'master' into bug-fix-par-green-ref-2d
2024-12-18 11:49:04 -08:00
Mark L. Stowell
7db0a9a8d3
Use spaceDim to ensure all necessary components of new vertices are computed
2024-12-18 11:03:10 -08:00
Tzanio Kolev
16a9b2be3c
Merge pull request #4371 from mfem/ncmesh-spacing
...
General NCMesh spacing
2024-12-18 06:50:43 -08:00
Tzanio Kolev
e731d2dd69
Merge pull request #4583 from lindsayad/install-miniapp-content
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Install miniapp content
2024-12-18 06:20:39 -08:00
Tzanio Kolev
6afc7e6fe8
minor
2024-12-17 17:24:25 -08:00
Tzanio Kolev
2a4fd1121e
Merge pull request #4467 from mfem/gslib-findpts-device-vol
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FindPointsGSLIB on GPUs
2024-12-17 16:31:12 -08:00
Tzanio Kolev
d5f029f016
Merge branch 'master' into ncmesh-spacing
2024-12-17 11:29:58 -08:00
Tzanio Kolev
06e7948445
Merge branch 'master' into positive-lp-err-dev
2024-12-17 11:29:53 -08:00
Veselin Dobrev and Andrew Ho
1bd9ed53b3
Update CMakeLists.txt
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Co-authored-by: Andrew Ho <ho37@llnl.gov >
2024-12-16 16:09:15 -08:00
Veselin Dobrev
f72bfcce92
Additional tweaks based on PR reviews
2024-12-16 14:31:11 -08:00
Veselin Dobrev and Nuno Nobre
971864c3a1
Apply suggestions from code review
...
Co-authored-by: Nuno Nobre <nuno.nobre@stfc.ac.uk >
2024-12-16 13:06:16 -08:00
Veselin Dobrev and Nuno Nobre
b11a4e2c6a
Update CMakeLists.txt
...
Co-authored-by: Nuno Nobre <nuno.nobre@stfc.ac.uk >
2024-12-16 13:02:37 -08:00
Mark L. Stowell
2a109bd2ea
Fixing return value comment
2024-12-16 11:36:27 -08:00
Alex Lindsay
9fce164b33
Veselin patch 2
2024-12-14 21:24:48 -07:00
adam-sim-dev
faf6ea6ca6
Merge branch 'master' into operator_equal
2024-12-15 09:34:17 +08:00
Mark L. Stowell
cbac9063ad
Merge branch 'master' into mark-external-faces-dev
2024-12-13 14:26:30 -08:00
Mark L. Stowell
66c3474eb3
Adding support for AMR meshes
2024-12-13 14:03:22 -08:00
David Kamensky
61fd002be4
Updating documentation and formatting, and re-ordering attributes/methods of Integrator in header.
2024-12-13 13:07:47 -07:00
Jan Nikl
24da41f6bb
Mentioned renaming of RiemannSolver in Changelog.
2024-12-13 10:03:34 -08:00
Jan Nikl
9943072dca
Removed the switch for numerical fluxes from ex18(p).
2024-12-13 09:59:27 -08:00
Jan Nikl and Chris Vogl
f8b638c569
Docs improvement in hyperbolic.hpp
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Co-authored-by: Chris Vogl <vogl2@llnl.gov >
2024-12-13 09:13:49 -08:00
Mark L. Stowell
0c88591848
make style
2024-12-12 15:46:07 -08:00
Mark L. Stowell
1cdc2eb295
Testing the new method with change from PR #4484
2024-12-12 14:53:31 -08:00
Mark L. Stowell
c8aa01fbe6
Using new methods to find essential BC DoFs in ex1 and ex1p
2024-12-12 14:52:48 -08:00
Mark L. Stowell
03c874a199
Adding GetExterior(VDofs|TrueDofs) functions to finite element space classes
2024-12-12 14:52:13 -08:00
Mark L. Stowell
3e69daedf7
Adding (Par)Mesh::GetExteriorFaceMarker to identify exterior faces of a mesh
2024-12-12 14:51:07 -08:00
Jan Nikl
1e4f2b5d2b
Renamed GodunovFlux to ScalarGodunovFlux to make clear it is component-wise.
2024-12-12 12:08:51 -08:00
Jan Nikl
e94e997790
Generalized gradient of RusanovFlux for systems.
2024-12-12 11:28:05 -08:00
Alex Lindsay
8b7b8bc4af
Apply Veselin patch
2024-12-12 11:39:32 -07:00
Vladimir Z Tomov
8a63fe8a49
Merge branch 'master' into bugfix-4570
2024-12-12 09:23:44 -08:00
Vladimir Z Tomov
08d8058ce1
Edited the doxygen based on review comments.
2024-12-12 09:21:01 -08:00
David Kamensky
ca48beb934
Adding integrator base class to unify quadrature rule selection.
2024-12-12 09:30:58 -07:00
Tzanio Kolev
9a9087e20b
Merge pull request #4504 from helloworld922/master
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Fix CUDA-enabled HYPRE finalization order issue
2024-12-12 07:26:37 -08:00
adam-sim-dev
d7370c8518
Merge branch 'master' into operator_equal
2024-12-12 15:33:46 +08:00
Jan Nikl
ef2636e4e9
Minor docs fix in hyperbolic.hpp.
2024-12-11 09:33:43 -08:00
Jan Nikl
0e1f45f060
Renamed rsolver to numFlux in HyperbolicFormIntegrator.
2024-12-11 09:30:17 -08:00
Jan Nikl
8cc9877716
Renamed Riemann solver to numerical flux in ex18(p).
2024-12-11 09:27:06 -08:00
Jan Nikl
0d389eed75
Fixed definitions of the characteristic speed.
2024-12-11 09:09:59 -08:00
Mark L. Stowell
029d0ee306
Adding improved documentation including parameter descriptions
2024-12-10 20:26:55 -08:00
Jan Nikl
46ab66d499
Moved warning about component-wise Godunov to its constructor.
2024-12-10 16:47:53 -08:00
Jan Nikl
144db3a53c
Fixed maximal characteristic velocity definitions.
2024-12-10 15:39:12 -08:00
Jan Nikl
5895c08ff2
Minor doxygen change for RusanovFlux.
2024-12-10 15:33:52 -08:00
Dylan Copeland
74e93755fa
Bug fix.
2024-12-10 13:36:56 -08:00
Mark L. Stowell
acb91a69ab
Merge branch 'positive-lp-err-dev' of github.com:mfem/mfem into positive-lp-err-dev
2024-12-10 13:26:48 -08:00
Mark L. Stowell
59b656a18c
Improving documentation as suggested by @najlkin
2024-12-10 13:25:42 -08:00
Mark L. Stowell
4305f39092
Repalcing if/else blocks with fabs where appropriate
2024-12-10 10:59:17 -08:00
Mark L. Stowell and Jan Nikl
367266ee95
Update fem/gridfunc.cpp
...
Co-authored-by: Jan Nikl <nikl1@llnl.gov >
2024-12-10 10:51:05 -08:00
Jan Nikl
afbaca05de
Merge branch 'master' into najlkin/impro-hyperbolic
2024-12-10 10:33:48 -08:00
Jan Nikl
5780c2c21c
Minor docs improvement.
2024-12-10 10:22:32 -08:00
Jan Nikl
16e0bad850
Renamed RiemannSolver to NumericalFlux with depracation of the old name.
2024-12-10 09:37:09 -08:00
Jan Nikl and Chris Vogl
5c0bd60944
Minor docs improvement.
...
Co-authored-by: Chris Vogl <vogl2@llnl.gov >
2024-12-10 09:35:14 -08:00
Jan Nikl and Chris Vogl
44438536af
Minor docs improvement.
...
Co-authored-by: Chris Vogl <vogl2@llnl.gov >
2024-12-10 09:33:53 -08:00
Jan Nikl and Chris Vogl
3d488cd2fd
Minor docs improvement.
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Co-authored-by: Chris Vogl <vogl2@llnl.gov >
2024-12-10 09:33:18 -08:00
Jan Nikl and Chris Vogl
099c3493b2
Minor docs improvement.
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Co-authored-by: Chris Vogl <vogl2@llnl.gov >
2024-12-10 09:32:46 -08:00
Jan Nikl and Chris Vogl
655623ca9b
Minor docs improvement.
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Co-authored-by: Chris Vogl <vogl2@llnl.gov >
2024-12-10 09:31:29 -08:00
Jan Nikl and Chris Vogl
f91f3d12a6
Minor docs improvement.
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Co-authored-by: Chris Vogl <vogl2@llnl.gov >
2024-12-10 09:30:37 -08:00
LeSnow Ye
fc8312383f
Fix mpi.h file not being found.
2024-12-10 13:43:30 +08:00
Vladimir Z Tomov
947bcc2b80
Removed leftover code from the previous approach.
2024-12-09 18:04:39 -08:00
Vladimir Z Tomov
4ff80fbb80
style
2024-12-09 17:48:20 -08:00
Vladimir Z Tomov
915fc1e910
fixed more warnings
2024-12-09 17:46:19 -08:00
Veselin Dobrev
6324806008
In CMake, fix an issue when finding PETSc with C compiler that is
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not an MPI C wrapper.
2024-12-09 11:50:25 -08:00
Tzanio Kolev
c3771b3352
Merge pull request #4613 from mfem/artv3/fix-ea-ho-lor-transfer-mem-leaks
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Fix memory leaks in EA-HO-LOR transfer operators
2024-12-09 10:52:50 -08:00
Andrew Ho
51a75893f7
Changes from Veselin
2024-12-09 08:21:57 -08:00
Vladimir Z Tomov
b164ad53a2
style
2024-12-08 18:18:22 -08:00
Vladimir Z Tomov
aab51f6935
Fixed -Wall errors.
2024-12-08 18:15:57 -08:00
Vladimir Z Tomov
23afe83964
minor comment
2024-12-08 17:15:18 -08:00
Vladimir Z Tomov
7845bca7be
doc error
2024-12-08 17:08:43 -08:00
Vladimir Z Tomov
98bbecd492
Simplification
2024-12-08 16:56:34 -08:00
Vladimir Z Tomov
e079915f76
style
2024-12-08 16:49:48 -08:00
Vladimir Z Tomov
ce253361c6
deprecated message
2024-12-08 16:46:33 -08:00
Vladimir Z Tomov
718a86594c
Added ComputeAtGivenPositions.
2024-12-08 15:22:35 -08:00
Vladimir Z Tomov
d24fd7d447
switched to the new function
2024-12-08 14:49:00 -08:00
Veselin Dobrev
cac27438f5
In GitHub CI, use custom install dir for CMake on Ubuntu
2024-12-08 13:45:10 -08:00
Veselin Dobrev
7f2a2692dd
In GNU make, during header installation, skip source directories that
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do not have *.hpp files in them.
2024-12-08 13:08:50 -08:00
Veselin Dobrev
48c1a80fdc
In the GitHub CI, add tests for the install targets
2024-12-08 13:01:27 -08:00
Vladimir Z Tomov
29a2501f8c
Comments, renamed the space.
2024-12-08 12:48:48 -08:00
Vladimir Z Tomov
ad7d173497
Added FESpace::GetNodePositions.
2024-12-08 09:51:53 -08:00
adam-sim-dev
9d2b6007ed
Merge branch 'master' into operator_equal
2024-12-08 18:03:25 +08:00
Tzanio Kolev
35bbdc75c9
Merge pull request #4608 from Heinrich-BR/master
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Conduit file path fix
2024-12-07 14:53:06 -08:00
Philipp Dumitrescu
88416db438
Fix style
2024-12-06 12:02:47 -08:00
Philipp Dumitrescu
00616cfccf
Adjust docstrings for Vector/CurlDim
2024-12-06 11:58:34 -08:00
Vladimir Z Tomov
b7c8d66a3d
Only comments and renamed variables.
2024-12-06 10:20:17 -08:00
Vladimir Z Tomov
c992bd681c
minor
2024-12-05 23:13:44 -08:00
Andrew Ho
9bee2fcac8
Merge branch 'master' into master
2024-12-05 22:45:36 -08:00
Andrew Ho
f1304374e0
Changed back to not use hypre's internal state tracker for calling init/finalize.
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This will mean users can initialize hypre themself, and mfem won't
automatically finalize hypre for them in this situation.
2024-12-05 22:43:05 -08:00
Nuno Nobre
d835203da0
Install miniapp content w/ GNU make
2024-12-05 15:42:01 -08:00
Alex Lindsay
49e4bd9d3d
Install miniapp content
2024-12-05 15:41:55 -08:00
Alex Lindsay
a3137917cd
Ignore TAGS
2024-12-05 14:10:12 -08:00
Mittal, Ketan
965959e88c
make sure fes_nodes are on device
2024-12-05 13:06:12 -08:00
Arturo Vargas
1136a2f283
remove unused destructor
2024-12-05 12:25:14 -08:00
Arturo Vargas
baf6ba5d66
Merge branch 'artv3/fix-ea-ho-lor-transfer-mem-leaks' of github.com:mfem/mfem into artv3/fix-ea-ho-lor-transfer-mem-leaks
2024-12-05 12:23:19 -08:00
Arturo Vargas
3fb7697ffb
use unique_ptr
2024-12-05 12:21:44 -08:00
Mittal, Ketan
6d288efd68
merge with master and resolve conflicts
2024-12-05 12:00:12 -08:00
Dylan Copeland
4b87236e73
Simplify interface for RefineElement function.
2024-12-05 11:40:57 -08:00
Dylan Copeland
8464088792
Merge branch 'master' of github.com:mfem/mfem into ncmesh-spacing
2024-12-05 10:44:59 -08:00
Dylan Copeland
c03257233f
New interface for RefineElement function.
2024-12-05 10:44:34 -08:00
adam-sim-dev
0f3df57632
Merge branch 'master' into operator_equal
2024-12-06 02:39:22 +08:00
Dylan Copeland
5c4d967f6c
Indentation
2024-12-05 10:26:05 -08:00
Dylan Copeland and Chris Vogl
436d1fa2ff
Indentation
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Co-authored-by: Chris Vogl <vogl2@llnl.gov >
2024-12-05 10:17:51 -08:00
Arturo Vargas
4f3bc873cc
Merge branch 'master' into artv3/fix-ea-ho-lor-transfer-mem-leaks
2024-12-05 10:04:23 -08:00
Arturo Vargas
cf90e56850
remove potential double free
2024-12-05 10:01:30 -08:00
Tzanio Kolev
7a6caccf99
Merge pull request #4600 from mfem/tmop-ae-space
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Support in InterpolatorFP for mesh and gridfunction to have a different space
2024-12-05 08:33:50 -08:00
Tzanio Kolev
f319ddef60
Merge pull request #4595 from adam-sim-dev/otmp
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Ignore the .o.tmp temporary files generated by the Intel LLVM compiler
2024-12-05 08:33:22 -08:00
Arturo Vargas
8f4c1dbe79
make style
2024-12-04 10:57:18 -08:00
Arturo Vargas
1e838ff45e
fix memory leaks
2024-12-04 10:30:57 -08:00
dylan-copeland
45c130f77b
Revert another change for the distance miniapp.
2024-12-03 21:07:20 -08:00
dylan-copeland
b805f2a48d
Revert changes to distance miniapp.
2024-12-03 21:03:12 -08:00
dylan-copeland
6b87974c70
Merge branch 'master' of github.com:mfem/mfem into ncmesh-spacing
2024-12-03 20:52:40 -08:00
dylan-copeland
181030cc29
Minor fixes.
2024-12-03 20:39:47 -08:00
Mittal, Ketan
04c43fa7b9
Merge branch 'master' of https://github.com/mfem/mfem into gslib-findpts-device-vol
2024-12-03 11:40:25 -08:00
Mittal, Ketan
0dc0d1fcb9
fix comment for doxygen
2024-12-03 11:33:38 -08:00
Mittal, Ketan
b96db37ab8
set discrete field order to 1
2024-12-03 11:29:23 -08:00
Andrew Ho
79834fa003
use hypre's internal state manager when possible, allow re-initialization
2024-12-03 09:50:07 -08:00
Andrew Ho
25a1f0b3c6
Merge branch 'master' into master
2024-12-03 09:18:14 -08:00
Mittal, Ketan
aba31a53be
guard MPI_Barrier and update sample runs
2024-12-02 16:30:03 -08:00
Mittal, Ketan
54982a700a
merge with master and resolve conflicts
2024-12-02 13:03:51 -08:00
Mittal, Ketan
d47622eed2
minor doxygen
2024-12-02 13:01:34 -08:00
“Henrique
6bcd940840
Conduit file path fix
2024-12-02 14:53:35 +00:00
Vladimir Z Tomov
93c07b5c1c
bug
2024-11-29 15:12:02 -08:00
Vladimir Z Tomov
90e77b9ca1
minor
2024-11-29 14:40:10 -08:00
Vladimir Z Tomov
3bd439a3c4
Merge branch 'master' into tmop-ae-space
2024-11-29 14:39:24 -08:00
Vladimir Z Tomov
5b825515f7
fixed a warning.
2024-11-29 14:38:00 -08:00
Vladimir Z Tomov
d4da37d89a
FD assume mesh_order = field_order for discrete adaptivity.
2024-11-29 00:40:07 -08:00
Vladimir Z Tomov
deb8bc7ed3
minor
2024-11-27 17:58:17 -08:00
Vladimir Z Tomov
982583068a
Renamed some things, references instead of copies.
2024-11-27 17:49:19 -08:00
adam-sim-dev
a6fdbe53b5
Use the operator= to init the (Par)ComplexLinearForm to zero
2024-11-28 09:13:46 +08:00
adam-sim-dev
21bf9c3c10
operator= for (Par)ComplexLinearForm
2024-11-27 17:12:40 +08:00
Tzanio Kolev
899a96b769
Merge pull request #4566 from david-kamensky/nurbs-constructors
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Adding new constructors for NURBS patches
2024-11-26 15:51:38 -08:00
Ketan Mittal
b4bd2f7e63
Merge branch 'master' into tmop-ae-space
2024-11-26 11:45:02 -08:00
David Kamensky
9837922654
Exceptions when calling serial prolongation/restriction setters for parallel FE space.
2024-11-26 11:05:24 -07:00
Veselin Dobrev
5ec2931690
Merge pull request #4564 from mfem/array-init-list
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Use std::initializer_list for braced-list construction
2024-11-25 19:16:23 -08:00
Veselin Dobrev
911511ed1d
Merge pull request #4550 from e-aranda/master
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fix username std conflict
2024-11-25 19:14:48 -08:00
Mittal, Ketan
d7e8d78ca4
Merge branch 'tmop-ae-space' of https://github.com/mfem/mfem into tmop-ae-space
2024-11-25 17:02:56 -08:00
Mittal, Ketan
bbc37c5236
make style and test in mesh-optimizer as well
2024-11-25 17:02:39 -08:00
Ketan Mittal
4ca2e5cef2
Merge branch 'master' into tmop-ae-space
2024-11-25 17:00:03 -08:00
Mittal, Ketan
c09c15c0b2
add check for adaptive limiting
2024-11-25 16:59:50 -08:00
Mittal, Ketan
d6d3e30832
make style
2024-11-25 15:20:23 -08:00
Mittal, Ketan
9129e51b86
fix to make any vdim work
2024-11-25 15:20:02 -08:00
Tzanio Kolev
0797adb30a
Merge pull request #4562 from adam-sim-dev/warning
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Fix part of warnings for MSVC
2024-11-24 13:50:03 -08:00
Tzanio Kolev
3945247cf5
Merge pull request #4540 from mfem/get-serial-gf
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Add version of ParGridFunction::GetSerialGridFunction using existing FiniteElementSpace
2024-11-24 13:49:37 -08:00
Mittal, Ketan
de6ac02a8d
minor
2024-11-22 17:24:53 -08:00
Mittal, Ketan
873a6aa84c
fix advectorCG and interpolatorFP for fields of different order
2024-11-22 17:19:09 -08:00
Will Pazner
2ac825abe8
Merge remote-tracking branch 'origin/master' into pa-empty-partitions
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# Conflicts:
# fem/bilininteg.cpp
# fem/quadinterpolator.cpp
2024-11-22 11:05:49 -08:00
adam-sim-dev
1262d17e8b
Merge branch 'master' into warning
2024-11-22 11:18:32 +08:00
Philipp Dumitrescu
211baab557
Move VectorDim, CurlDim to FiniteElementSpace
2024-11-21 16:50:50 -08:00
adam-sim-dev
d6e1063c5e
Update globals.cpp
2024-11-22 08:40:09 +08:00
Tzanio Kolev
fe9bd03f4b
Merge pull request #4585 from mfem/tmop-conv-warning
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Fix verbosity levels for NewtonSolver in TMOP miniapps
2024-11-21 16:05:35 -08:00
Will Pazner
7645bce2b5
Merge remote-tracking branch 'origin/master' into array-init-list
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# Conflicts:
# general/array.hpp
# tests/unit/general/test_array.cpp
2024-11-21 13:27:02 -08:00
Mittal, Ketan
7cb81d5916
minor
2024-11-21 09:38:17 -08:00
Mittal, Ketan
128882200d
add checks to ensure size consistency
2024-11-21 09:37:13 -08:00
adam-sim-dev
3f4dd4db7f
Resolve the review comments by Veselin
2024-11-21 15:17:47 +08:00
camierjs
2835cd7e3a
Merge master in debug-device-test
2024-11-20 20:17:50 -08:00
adam-sim-dev
73dbd7446f
Merge branch 'master' into warning
2024-11-21 11:16:21 +08:00
Tzanio Kolev
7c1a0eb5e3
Merge pull request #4576 from mfem/kernel-dispatch-ensure-init
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Ensure kernel specializations are instantiated
2024-11-20 12:59:40 -08:00
Mittal, Ketan
fc0a1eb8da
update get obb
2024-11-19 16:10:01 -08:00
Mittal, Ketan
e458e579e0
merge with master and resolve conflict
2024-11-19 15:27:57 -08:00
Mittal, Ketan
f6dbf49709
Merge branch 'gslib-findpts-device-vol' of https://github.com/mfem/mfem into gslib-findpts-device-vol
2024-11-19 15:27:00 -08:00
Mittal, Ketan
f4be9104f5
add method to get AABB and OBB info
2024-11-19 15:26:46 -08:00
Mittal, Ketan
3183af1b3c
Merge branch 'tmop-conv-warning' of https://github.com/mfem/mfem into tmop-conv-warning
2024-11-19 14:39:32 -08:00
Mittal, Ketan
ced884b231
update rtol for LBFGS run
2024-11-19 14:39:12 -08:00
Will Pazner
afbd1a1ba5
Improve Doxygen and unit tests for ParGridFunction::GetSerialGridFunction
2024-11-19 10:49:38 -08:00
Mittal, Ketan
314ae7ed36
out -> outm
2024-11-19 09:46:10 -08:00
adam-sim-dev
72dc18cccb
Ignore the .o.tmp temporary file generated by the Intel LLVM compiler
2024-11-19 17:12:49 +08:00
Mittal, Ketan
119d257bb1
clean up
2024-11-18 18:37:51 -08:00
Mittal, Ketan
4559bd4bea
minor, and add nu_49 and 50
2024-11-18 18:19:36 -08:00
Justin Laughlin
8e3674396f
Merge branch 'master' into nurbs-constructors
2024-11-18 11:49:58 -08:00
Ketan Mittal
4c0c3f822a
Merge branch 'master' into get-serial-gf
2024-11-18 11:49:31 -08:00
adam-sim-dev
cba0739740
Code style edit
2024-11-18 10:29:35 +08:00
adam-sim-dev
75f0ed1b67
static_cast size_t to int
2024-11-18 09:40:58 +08:00
adam-sim-dev
8853f574da
static_cast _Ty (it's int) to int
2024-11-18 08:53:35 +08:00
adam-sim-dev
645b7ba0dc
static_cast _Ty (it's int) to int
2024-11-18 08:52:07 +08:00
adam-sim-dev
e90cff6413
static_cast _Ty (it's int) to int
2024-11-18 08:42:56 +08:00
Mittal, Ketan
0fc4ee363b
add nu51
2024-11-17 12:43:42 -08:00
Ketan Mittal
449778485d
Merge branch 'master' into tmop-conv-warning
2024-11-16 13:19:01 -08:00
Mittal, Ketan
59a033b3ea
rel norm at the end of Newton and LBFGS
2024-11-16 13:18:20 -08:00
adam-sim-dev
bf47bc9210
Update socketstream.cpp
2024-11-16 16:18:05 +08:00
adam-sim-dev
4eac35a79a
Fix conversion of pointer differences __int64 to int. Suggested by najlkin
2024-11-16 16:08:20 +08:00
adam-sim-dev
dffee6b764
Merge pull request #2 from adam-sim-dev/master
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Merge master into warning
2024-11-16 15:29:40 +08:00
David Kamensky
a954ed2046
Adding exception for NURBS mesh with no patches.
2024-11-15 10:35:16 -07:00
Ketan Mittal
064c5261a7
Merge branch 'master' into gslib-findpts-device-vol
2024-11-15 09:21:26 -08:00
David Kamensky
6e814df8cd
Simplifying/clarifying KnotVector constructor and adding consistency checks.
2024-11-15 08:56:22 -07:00
adam-sim-dev
fe3a6cba80
Merge pull request #1 from adam-sim-dev/_CRT_SECURE_NO_WARNINGS
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Define a wrapper for getenv() to turn off CRT deprecation warnings
2024-11-15 09:40:31 +08:00
adam-sim-dev
8883f34f5d
Define a wrapper for getenv() to turn off CRT deprecation warnings
2024-11-15 09:28:11 +08:00
737d9032d7
Adding new constructors for NURBS meshes.
...
This adds some convenience constructors for NURBS patches, and also includes a test exercising the new functionality.
Co-authored-by: Derek Thomas <derek@coreform.com >
Co-authored-by: Kevin Tew <kevin@coreform.com >
Co-authored-by: David Kamensky <david@coreform.com >
Co-authored-by: Justin Laughlin <laughlin6@llnl.gov >
2024-11-14 12:08:15 -07:00
Mittal, Ketan
4993d5e715
update some sample runs
2024-11-14 10:31:23 -08:00
Will Pazner
9148e14b6f
Remove unneeded Doxygen comments in cpp file
2024-11-14 09:00:46 -08:00
David Kamensky and Derek Thomas
e8c5dbd885
Methods to set prolongation and restriction operators.
...
Co-authored-by: Derek Thomas <derek@coreform.com >
Co-authored-by: David Kamensky <david@coreform.com >
2024-11-14 08:58:06 -07:00
Will Pazner
e561db6d0a
MFEM_EXPORT for static kernel dispatch members
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For compatibility with Windows/MSVC
2024-11-13 22:41:29 -08:00
Will Pazner
40dbb933e7
Attempt workaround for MSVC segfault
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Potential compiler bug with delegated constructors in MSVC
2024-11-13 19:55:17 -08:00
Mark L. Stowell
71a25ca7fa
Adding documentation explaining this new behavior
2024-11-13 14:30:16 -08:00
Mark L. Stowell
d06d5e2a5a
Taking absolute value in each element to avoid cancellation between elements
2024-11-13 13:51:56 -08:00
Mittal, Ketan
026c5c9808
make style
2024-11-13 10:38:34 -08:00
Mittal, Ketan
7587dcad87
compile kernels for v1.0.9 or higher
2024-11-13 10:38:17 -08:00
Mittal, Ketan
3bcd024ca4
fix memory bug for nu11
2024-11-13 07:50:31 -08:00
Ernesto Aranda
701f109c1b
Update convection-diffusion.cpp
2024-11-13 12:32:59 +01:00
Ernesto Aranda
e250112b1b
Update pconvection-diffusion.cpp
2024-11-13 12:32:04 +01:00
Ernesto Aranda
70af0843a6
Update convection-diffusion.cpp
2024-11-13 12:30:21 +01:00
Ernesto Aranda
9176c2b95f
Merge branch 'mfem:master' into master
2024-11-13 09:14:35 +01:00
adam-sim-dev
79afc9f006
Merge branch 'master' into warning
2024-11-13 10:55:38 +08:00
Mittal, Ketan
57ebd5f0a1
minor
2024-11-12 17:58:51 -08:00
Mittal, Ketan
df8989a28a
Merge branch 'master' of https://github.com/mfem/mfem into TMOP_AD_ms
2024-11-12 17:26:11 -08:00
Mittal, Ketan
6377476998
Backwards compatibility for gslib v1.0.7
2024-11-12 17:18:40 -08:00
adam-sim-dev
aeeadfe5d0
Revert "Remove #define _CRT_SECURE_NO_WARNINGS"
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This reverts commit 941c6c2bac .
2024-11-13 09:10:34 +08:00
adam-sim-dev
29417aed77
Revert "define _CRT_SECURE_NO_WARNINGS for MSVC"
...
This reverts commit bee8df8b42 .
2024-11-13 09:10:26 +08:00
adam-sim-dev
1f6abc2e0b
Merge branch 'master' into warning
2024-11-13 05:21:58 +08:00
Will Pazner
293b5f78e8
Change kernel specialization instantiation to use local static variable in constructor
...
This is in order to avoid issues with the static member variable being optimized
away by the compiler.
2024-11-12 12:55:08 -08:00
Will Pazner
2ebe3efde8
Add unit test for kernel specializations
...
Adds const reference accessor for the kernel dispatch table
2024-11-12 12:06:14 -08:00
Mittal, Ketan
7399d8a8e0
fix for fitting miniapp
2024-11-11 18:45:30 -08:00
Mittal, Ketan
6ae591075c
set verbosity level to always output warnings and errors
2024-11-11 18:15:33 -08:00
Mittal, Ketan
5f69535a0e
AD for mu11
2024-11-11 13:16:44 -08:00
Mittal, Ketan
df13f75834
use dmu/dW in gradient for mu(A,W)
2024-11-11 12:15:57 -08:00
adam-sim-dev
e49747c49b
Merge branch 'master' into warning
2024-11-11 08:41:10 +08:00
Mittal, Ketan
b0b726a2a9
merge and resolve conflicts
2024-11-09 16:09:15 -08:00
Mark L. Stowell
86b2599e50
Returning positive errors from GridFunction::ComputeLpError and related functions
2024-11-09 15:07:11 -08:00
Will Pazner
8007b5073f
MFEM_EXPORT static member variables
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Move QuadratureInterpolator::Kernels to static local variable
2024-11-09 07:31:08 -08:00
Will Pazner
780eaeda5a
Don't inline Kernels::EnsureInitialized()
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Prevent the compiler from optimizing out the calls
2024-11-08 14:15:48 -08:00
Will Pazner
8a4bb61a2a
Ensure kernel dispatch tables are initialized
...
The kernel dispatch tables are initialized in the constructor of a static member
variable.
If this variable is not odr-used, then it may be optimized away, and the
initialization code is never called. This commit ensures the initialization occurs
by adding a no-op EnsureInitialized member function to the Kernels class that can
be called from the integrator constructor.
2024-11-08 12:05:33 -08:00
Alex Lindsay
dc1b1ce0ec
PetscContainerSetUserDestroy -> PetscContainerSetCtxDestroy
2024-11-08 11:39:20 -08:00
Vladimir Z Tomov
cd34967081
minor
2024-11-08 10:26:19 -08:00
Vladimir Z Tomov
f2496c3599
minor
2024-11-08 10:22:39 -08:00
Vladimir Tomov
1ad507217d
Merge pull request #4573 from hifabian/bugfix-4570
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Correct scaling for VectorDiffusionIntegrator
2024-11-08 09:10:35 -08:00
hifabian
5ea5e37c9f
Correct scaling for VectorDiffusionIntegrator
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This corrects the scaling for VectorCoefficient and MatrixCoefficient in
the AssembleElementVector member function for VectorDiffusionIntegrator.
The integration was incorrect before due to the wrong scaling.
This resolves issue #4570
2024-11-08 12:40:47 +09:00
Vladimir Z Tomov
909272fc0d
Unit test for VectorDiffusionIntegrator related to github issue 4570.
2024-11-07 11:38:04 -08:00
adam-sim-dev
ff4544771b
Merge branch 'master' into warning
2024-11-06 21:45:59 +08:00
adam-sim-dev
255c0c77e0
Merge branch 'master' into warning
2024-11-05 08:43:11 +08:00
Hugh Carson
1fcea2faf4
Merge branch 'master' into hughcars/gmsh-reader-periodic-bugfix
2024-11-04 11:41:39 -05:00
adam-sim-dev
470698bb28
Merge branch 'master' into warning
2024-11-04 08:27:54 +08:00
Jan Nikl
8a4df331fe
Replaced plain pointer by the std unique pointer.
2024-11-01 17:28:24 -07:00
Jan Nikl
6c07f873ef
Merge branch 'master' into najlkin/impro-hyperbolic
2024-11-01 17:24:06 -07:00
Jan Nikl
7068d022f8
Added notes about usage of some methods.
2024-11-01 17:17:37 -07:00
Will Pazner
c232029d84
Add unit test for convertible type Vector constructor
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Also add include for type_traits header
2024-11-01 15:56:35 -07:00
Will Pazner
c9cf2ec345
Add unit test for convertible type Array constructor
2024-11-01 14:45:51 -07:00
Will Pazner
7195af90b1
Compile-time check for Array convertible-type constructor
2024-11-01 14:43:39 -07:00
adam-sim-dev
325929278d
Update communication.hpp
2024-11-01 08:33:52 +08:00
Vladimir Z Tomov
833ed331e1
style and minor formatting.
2024-10-31 14:46:18 -07:00
Will Pazner
ea6ab76762
Change order of Vector constructor template parameters to match Array
2024-10-31 13:59:33 -07:00
Will Pazner
b4efd401b8
Re-add C-style array constructor for Vector
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Also small adjustments to the Vector and Array unit tests
2024-10-31 13:58:11 -07:00
Will Pazner
c7bb0201c0
Re-add C-style array constructor for Array
2024-10-31 10:09:59 -07:00
Will Pazner
8a19254fc6
In Vector braced list constructor, use enable_if to select only types convertible to real_t
2024-10-31 10:00:41 -07:00
Will Pazner
ff0b016126
Use std::initializer_list for braced-list construction
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In the previous implementation, Array<T>({1}) would select the Array<T>(int)
constructor rather than the braced-list constructor.
2024-10-31 09:32:01 -07:00
adam-sim-dev
88f90717b1
Format the code style
2024-10-31 20:38:02 +08:00
adam-sim-dev
256995a053
Format the code style
2024-10-31 20:24:24 +08:00
adam-sim-dev
941c6c2bac
Remove #define _CRT_SECURE_NO_WARNINGS
2024-10-31 20:14:22 +08:00
adam-sim-dev
de235a0660
static_cast size_t to int
2024-10-31 18:11:24 +08:00
adam-sim-dev
bee8df8b42
define _CRT_SECURE_NO_WARNINGS for MSVC
2024-10-31 18:08:23 +08:00
adam-sim-dev
4e17193a11
convert time_t to int
2024-10-31 18:08:00 +08:00
adam-sim-dev
b4dfb8660d
static_cast size_t to int
2024-10-31 18:07:45 +08:00
Dylan Copeland
95a5c503b1
Remove assert.
2024-10-30 11:53:45 -07:00
dylan-copeland
e05a13bc98
Merge branch 'master' of github.com:mfem/mfem into ncmesh-spacing
2024-10-30 11:23:57 -07:00
dylan-copeland
e5cfc35f87
Removed int type for refinements.
2024-10-30 11:23:41 -07:00
Ernesto Aranda
e1b98c30ec
Update pconvection-diffusion.cpp (tab problem?)
2024-10-28 23:06:23 +01:00
Ernesto Aranda
33cbfac042
Merge branch 'master' of https://github.com/e-aranda/mfem
2024-10-28 19:32:18 +01:00
Ernesto Aranda
41d94a5528
correcting style
2024-10-28 19:27:31 +01:00
Tzanio Kolev
a7382dd25e
Update pconvection-diffusion.cpp
2024-10-28 11:24:42 -07:00
Tzanio Kolev
c83264e825
Update pconvection-diffusion.cpp
2024-10-28 11:24:04 -07:00
Tzanio Kolev
70a4d67169
Update convection-diffusion.cpp
2024-10-28 11:23:27 -07:00
Ernesto Aranda
498d539f68
Update pconvection-diffusion.cpp fix typo
2024-10-28 18:21:28 +01:00
Ernesto Aranda
a7cdb86334
Update convection-diffusion.cpp fixed typo
2024-10-28 18:20:35 +01:00
Ernesto Aranda
4259ecc48b
Update pconvection-diffusion.cpp code style
2024-10-28 17:43:55 +01:00
Ernesto Aranda
1382f6c771
Update convection-diffusion.cpp code-style
2024-10-28 17:42:32 +01:00
Ernesto Aranda
d0b1f760eb
fix username std conflict
2024-10-28 16:55:20 +01:00
Tzanio Kolev
846c63d53e
Merge branch 'master' into get-serial-gf
2024-10-27 15:50:53 -07:00
Dylan Copeland
91f14abe6e
Disallow inconsistent refinement scalings on an edge.
2024-10-25 12:39:55 -07:00
Will Pazner
acf8bdb43e
Close stream before calling std::remove
2024-10-15 19:50:14 -07:00
Will Pazner
c99c7581d8
Add version of ParGridFunction::GetSerialGridFunction using existing FiniteElementSpace
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Also update the associated unit test
2024-10-15 16:15:40 -07:00
Julian Andrej
33cb37689b
double -> real
2024-10-15 13:00:46 -07:00
Julian Andrej
f460048de7
Merge branch 'master' into solver-monitor-controller
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# Conflicts:
# linalg/solvers.cpp
# linalg/solvers.hpp
2024-10-15 12:52:48 -07:00
dylan-copeland
17d29a8390
Minor fix.
2024-10-15 12:05:09 -07:00
dylan-copeland
e5de10c9d9
Restoring backwards compatibility.
2024-10-15 11:55:02 -07:00
Tzanio Kolev
33e507ccbc
Merge branch 'master' into master
2024-10-14 17:23:45 -07:00
dylan-copeland
db75ba5bed
Merge branch 'master' of github.com:mfem/mfem into ncmesh-spacing
2024-10-11 21:00:04 -07:00
dylan-copeland
a926841cf9
Improved interface for Refinement.
2024-10-11 20:08:05 -07:00
Jan Nikl
976234b376
Fixed initialization of max char speed in HyperbolicFormIntegrator.
2024-10-08 14:42:40 -07:00
Jan Nikl
09b7d0a251
A fix for Windows CI.
2024-10-02 15:34:55 -07:00
Jan Nikl
607775421c
Added a note about component-wise Godunov flux to example 18.
2024-10-02 15:23:48 -07:00
Jan Nikl
3d226227d8
Added tolerance for comparison of states.
2024-10-02 15:17:30 -07:00
Andrew Ho
48c1be8fb5
Changes suggested by Will
...
- fixed accidentally copying the singleton
- deleted copy/move constructors to prevent future accidental copying
2024-09-27 14:39:30 -07:00
Jan Nikl
ab15daf765
Specified the maximal velocity in FluxFunction.
2024-09-26 12:31:11 -07:00
Jan Nikl
a8ca317754
Added notes about treatment of systems in Rusanov and Godunov.
2024-09-26 10:22:01 -07:00
Jan Nikl
2a703daa56
Added a note about gradients for systems in Rusanov and Godunov.
2024-09-26 09:51:44 -07:00
Andrew Ho
b3323ef6e4
Merge remote-tracking branch 'refs/remotes/origin/master'
2024-09-25 18:42:45 -07:00
Andrew Ho
345957aae2
Have Hypre track if it was initialized in addition to finalized.
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Moved where HYPRE_Init gets called.
2024-09-25 18:27:10 -07:00
Mathias Rainer Schmidt
e85a96e745
- documentation
2024-09-25 14:07:03 -07:00
Mathias Rainer Schmidt
7719196373
- added documentation
2024-09-25 14:01:28 -07:00
Mathias Rainer Schmidt
601ea3a147
Merge remote-tracking branch 'origin/master' into TMOP_AD_ms
2024-09-25 13:54:49 -07:00
Mathias Rainer Schmidt
8e85dcfbc8
- added AD computation of residual and hassian for selected tmop metrics
2024-09-25 13:39:35 -07:00
Jan Nikl
f8e809903b
Updated CHANGELOG.
2024-09-24 09:52:08 -07:00
Jan Nikl
ae6a90e383
Revert "Added a note about average flux for systems."
...
This reverts commit cd20285435 .
2024-09-24 09:40:06 -07:00
Jan Nikl
cd20285435
Added a note about average flux for systems.
2024-09-23 17:36:04 -07:00
Jan Nikl
e31e40b4fb
Replaced latex by unicode for average fluxes.
2024-09-23 17:27:09 -07:00
Jan Nikl
3320cbda43
Make style.
2024-09-23 16:01:57 -07:00
Jan Nikl
b269d1dc2f
Clarified the definition of the average flux.
2024-09-23 16:00:30 -07:00
Jan Nikl
381abe9002
Fixed and updated the file dox.
2024-09-23 15:59:46 -07:00
Jan Nikl
2496d2af00
Fixed the definition of jump in hyperbolic.
2024-09-23 15:59:46 -07:00
Jan Nikl
8d077885a2
Fixed beggining -> beginning.
2024-09-23 15:31:14 -07:00
Jan Nikl and Chris Vogl
d929df70c2
Fixed a typo in dox.
...
Co-authored-by: Chris Vogl <vogl2@llnl.gov >
2024-09-23 15:28:20 -07:00
Ketan Mittal
343c4812a6
use required number of threads in kernels
2024-09-19 20:22:14 -07:00
Jan Nikl
beae628d98
Removed Engquist-Osher flux as it conincides with Godunov.
2024-09-19 10:35:18 -07:00
Jan Nikl
d9814767a2
Added the new Riemann solvers to ex18(p).
2024-09-19 09:17:14 -07:00
Jan Nikl
b6c7920a3d
Fixed zeros for real_t type.
2024-09-18 17:46:14 -07:00
Jan Nikl
00a1775659
Fixed shadowing in HyperbolicFormIntegrator::AssembleElementGrad().
2024-09-18 17:32:16 -07:00
Jan Nikl
8c4f7851b3
Fixed dox of FluxFunction.
2024-09-18 17:27:23 -07:00
Jan Nikl
ac0a593a6e
Fixed shadowing in FluxFunction.
2024-09-18 17:24:04 -07:00
Jan Nikl
b1c328aafb
Minor fix of dox in hyperbolic.
2024-09-18 15:41:23 -07:00
Jan Nikl
dd3fa25da7
Fixed @see usage in hyperbolic.
2024-09-18 15:41:23 -07:00
Jan Nikl
f3814356d3
Added names to the flux functions.
2024-09-18 15:41:23 -07:00
Jan Nikl
7a708f4d64
Minor unification of dox in hyperbolic.
2024-09-18 15:41:23 -07:00
Jan Nikl
969077f526
Added face gradient to HyperbolicFormIntegrator.
2024-09-18 15:41:23 -07:00
Jan Nikl
825e8224a2
Added gradient to Riemann solvers.
2024-09-18 15:39:58 -07:00
Jan Nikl
f645bae11a
Minor dox improvement in hyperbolic.
2024-09-18 15:39:58 -07:00
Jan Nikl
e05b0bcb44
Improved Engquist-Osher Jacobian of average flux to use the limit form.
2024-09-18 15:39:58 -07:00
Jan Nikl
52945319b2
Improved Godunov Jacobian of average flux to use the limit form.
2024-09-18 15:39:58 -07:00
Jan Nikl
13cd22c4b2
Added side=1 implementation of Jacobian to RusanovFlux.
2024-09-18 15:39:58 -07:00
Jan Nikl
f920464b4d
Added side=1 implementation of Jacobian to GodunovFlux.
2024-09-18 15:39:57 -07:00
Jan Nikl
48cfa24e8e
Added side=1 implementation of Jacobian to EngquistOsherFlux.
2024-09-18 15:39:57 -07:00
Jan Nikl
8d2402e654
Minor dox improvement in hyperbolic.
2024-09-18 15:39:57 -07:00
Jan Nikl
c0ac027e72
Added Engquist-Osher flux.
2024-09-18 15:39:57 -07:00
Jan Nikl
90ce12cb2f
Minor doc fix for GodunovFlux.
2024-09-18 15:39:57 -07:00
Jan Nikl
97619c08f7
Changed non-decreasing to monotonous for Riemann solvers, which accounts for different signs.
2024-09-18 15:39:43 -07:00
Jan Nikl
db38490daf
Unified fluxes to use indexing parenthesis.
2024-09-18 15:39:43 -07:00
Jan Nikl
ffaa345807
Added Godunov average and average Jacobian.
2024-09-18 15:39:43 -07:00
Jan Nikl
91f8956649
Minor dox fixup in hyperbolic.
2024-09-18 15:39:43 -07:00
Jan Nikl
03007510f3
Added Godunov flux.
2024-09-18 15:39:43 -07:00
Jan Nikl
af1d533330
Minor fix of dox in hyperbolic.
2024-09-18 15:39:43 -07:00
Jan Nikl
51af7963da
Added Rusanov flux Average(Grad)().
2024-09-18 15:39:07 -07:00
Jan Nikl
fa467ebf11
Added a note about monotonicity of F in Rusanov.
2024-09-18 15:39:07 -07:00
Jan Nikl
6d461e600d
Minor dox fixes in hyperbolic.hpp.
2024-09-18 15:39:07 -07:00
Jan Nikl
4e52184594
Minor cleanup of RusanovFlux.
2024-09-18 15:39:07 -07:00
Jan Nikl
3dda022825
Added average fluxes to advection and Burgers FluxFunctions.
2024-09-18 15:39:07 -07:00
Jan Nikl
be17af796b
Added average gradient method to RiemannSolver.
2024-09-18 15:39:07 -07:00
Jan Nikl
130aa7072b
Added normal fluxes to advection and Burgers FluxFunctions.
2024-09-18 15:39:07 -07:00
Jan Nikl
c36623d665
Added average numerical flux to RiemannSolver.
2024-09-18 15:39:07 -07:00
Jan Nikl
dad4e4cf2e
Added average (normal) flux methods to FluxFunction.
2024-09-18 15:39:07 -07:00
Jan Nikl
cb5470b63c
Dimensions clarification in FluxFunction.
2024-09-18 15:39:07 -07:00
Jan Nikl
4aa52f4d61
Changed face/el information -> transformation.
2024-09-18 15:39:07 -07:00
Jan Nikl
39ee3831e7
Minor fix of dox for RiemannSolver::Eval().
2024-09-18 15:39:07 -07:00
Jan Nikl
824ae129c5
Added Jacobians to AdvectionFlux.
2024-09-18 15:39:07 -07:00
Jan Nikl
7a824a4489
Optimized Burgers taking into account it has num_equations=1.
2024-09-18 15:39:07 -07:00
Jan Nikl
f42b4d5789
Extended documentation in hyperbolic.hpp.
2024-09-18 15:39:07 -07:00
Jan Nikl
87638e3f26
Added JdotN to Burgers.
2024-09-18 15:39:07 -07:00
Jan Nikl
77095f5bc8
Moved the constructor of HyperbolicFormIntegrator to the top.
2024-09-18 15:32:47 -07:00
Jan Nikl
c4d26dd313
Fixed dim of nor in HyperbolicFormIntegrator::AssembleFaceVector().
2024-09-18 15:32:46 -07:00
Jan Nikl
093670e070
Fixed physical dshape dimension in HyperbolicFormIntegrator.
2024-09-18 15:32:46 -07:00
Jan Nikl
612e0777d8
Added gradient to HyperbolicFormIntegrator.
2024-09-18 15:32:46 -07:00
Jan Nikl
e75359d87f
Added optinal sign parameter to HyperbolicFormIntegrator.
2024-09-18 15:32:46 -07:00
Jan Nikl
78aea079ff
Added Jacobian to BurgersFlux.
2024-09-18 15:32:46 -07:00
Jan Nikl
985b4c121e
Added ComputeFluxJacobianDotN().
2024-09-18 15:32:46 -07:00
Jan Nikl
07230f9d47
Improved documentation in hyperbolic.hpp.
2024-09-18 15:32:37 -07:00
Jan Nikl
3eacfe9d7e
Changed allocation of flux in FluxFunction on-demand.
2024-09-18 14:12:42 -07:00
Ketan Mittal
98e0932f63
reviewer comments
2024-09-16 18:46:28 -07:00
Tzanio Kolev
7f6cbffd82
Merge branch 'master' into master
2024-09-16 08:53:05 -07:00
Andrew Ho
f61629c5a5
Whitespace formatting from astyle
2024-09-13 18:02:16 -07:00
Andrew Ho
b3fff9267a
Moved Hypre::Finalize earlier in Device::~Device, only finalize HYPRE if it's been initialized.
...
Moving Hypre::Finalize earlier ensures that early return paths in
Device::~Device don't prevent Hypre::Finalize from executing.
2024-09-13 17:55:09 -07:00
Andrew Ho
c253f00ddc
Added ifdef guard for MFEM_USE_MPI
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Hypre singleton doesn't exist otherwise
2024-09-13 12:16:54 -07:00
Andrew Ho
cc43f03baa
Merge branch 'mfem:master' into master
2024-09-13 11:57:52 -07:00
Andrew Ho
cd5a72fabe
Ensure that HYPRE is finalized inside the main function.
...
This fixes a bug where the Hypre singleton is currently cleaned up
after the main function returns, which causes errors with cleaning up
internal Cuda objects in HYPRE.
2024-09-13 11:52:06 -07:00
dylan-copeland
f08544c863
Mac fix
2024-09-12 15:24:35 -07:00
Dylan Copeland
17929e4781
Scaled refinement in unit tests.
2024-09-12 14:10:50 -07:00
Dylan Copeland
37dd6b32d3
CHANGELOG
2024-09-12 13:00:40 -07:00
Dylan Copeland
fd270b6c5f
Merge branch 'master' of github.com:mfem/mfem into ncmesh-spacing
2024-09-12 12:16:56 -07:00
Dylan Copeland
910e840fda
Documentation and minor fixes.
2024-09-12 12:15:06 -07:00
dylan-copeland
6194522f56
make clean
2024-09-11 12:28:52 -07:00
dylan-copeland
99cbad4040
Increase tolerance for single precision.
2024-09-11 12:05:37 -07:00
dylan-copeland
fa7adc73eb
Wshadow
2024-09-11 11:43:28 -07:00
dylan-copeland
7d3a46e95b
Fix mac build.
2024-09-11 11:29:22 -07:00
Dylan Copeland
9bc55b81b4
Output of v1.1. Modified distance miniapp to do scaled AMR based on distance.
2024-09-11 11:11:43 -07:00
Dylan Copeland
b541898594
Generalized for refinement of an element in more than 1 direction, with different spacings in each direction.
2024-09-10 13:15:40 -07:00
Mittal, Ketan
4a9f7f683d
remove headers
2024-09-05 10:06:39 -07:00
Mittal, Ketan
9d89d1abef
remove stopwatch timers
2024-09-05 10:05:59 -07:00
Mittal, Ketan
2ea08bacb4
make style
2024-09-04 09:24:48 -07:00
Hugh Carson
b3ab618e6e
Do not remove all internal boundaries if loading a periodic mesh
2024-09-04 10:48:38 -04:00
Ketan Mittal
66a2f5439d
minor
2024-09-03 15:37:42 -07:00
Ketan Mittal
60326c575e
minor fix, use edge/face mask only with thread 0, and remove bbox if block
2024-09-03 15:36:23 -07:00
Mittal, Ketan
a9ae482df0
merge with master and resolve conflicts
2024-09-01 14:26:19 -07:00
Mittal, Ketan
04c7fa0f1c
clean up code setting logic for points locally and on other ranks
2024-09-01 14:16:49 -07:00
Mittal, Ketan
c65e6ad71c
merge with master and resolve conflicts
2024-08-30 15:46:54 -07:00
Mittal, Ketan
8537c16f3d
update miniapp to match original.. and add comments to kernel
2024-08-30 15:38:01 -07:00
Dylan Copeland
551c7a2a72
Fixed unit tests.
2024-08-29 20:04:20 -07:00
dylan-copeland
66981ac2fa
Fix mac build.
2024-08-29 17:03:16 -07:00
Dylan Copeland
9b331b608d
New NC mesh file format for scaling.
2024-08-29 16:40:24 -07:00
Dylan Copeland
11e2e7f039
Created a miniapp to demonstrate random 3:1 refinement in 2D and 3D. Reverted ex1.
2024-08-29 16:05:27 -07:00
Mittal, Ketan
9827a0f33e
set gsl_mfem_elem
2024-08-27 08:56:32 -07:00
Mittal, Ketan
eb6a485bc2
minor fix for L2 at element face
2024-08-26 17:38:43 -07:00
Mittal, Ketan
24532a295f
automatically move data to host depending on field type
2024-08-26 14:10:51 -07:00
Mittal, Ketan
9ae249c2fc
refactoring and renaming
2024-08-26 12:14:48 -07:00
Mittal, Ketan
312ed03ffd
add way to randomize points in the mesh
2024-08-20 14:59:15 -07:00
Ketan Mittal
1b16534745
bug fix in new interpolation kernel and mapping in findpoints
2024-08-19 17:13:25 -07:00
Mittal, Ketan
81dcc8cdb1
dont need to map refpos for GPU version since it is done locally before communication during find now
2024-08-19 13:01:51 -07:00
Mittal, Ketan
cfc96fa055
alternate kernel for interpolate using N^D threads
2024-08-19 09:52:09 -07:00
nbeams
8de4c778a6
Require C++17 if using Ginkgo
2024-08-15 20:07:19 +00:00
Mittal, Ketan
1c768998a4
rename functions and clean up
2024-08-14 14:18:55 -07:00
Mittal, Ketan
a9f6fc53da
get rid of some changes that were put in for surface meshes
2024-08-14 10:36:31 -07:00
Mittal, Ketan
3e967ff7b7
template interpolation kernel
2024-08-13 21:52:52 -07:00
Mittal, Ketan
1bd5b19ad4
fix shared memory array sizes
2024-08-13 13:45:51 -07:00
Mittal, Ketan
b0971b1f80
rename and cosmetic changes
2024-08-13 11:27:17 -07:00
Mittal, Ketan
0284105a59
make style
2024-08-12 18:44:04 -07:00
Mittal, Ketan
5830a87b75
bring in changes from other branch
2024-08-12 18:43:53 -07:00
Dylan Copeland
b062c59580
Debugged the 2D case and added 2D tests to ex1.
2024-07-17 18:30:30 -07:00
Dylan Copeland
1fce567e82
Fixed 3:1 refinement function by finding correct children in general. Added random test.
2024-07-16 23:23:57 -07:00
Dylan Copeland
c06e6d6431
More bug fixes for special cases.
2024-07-16 14:47:55 -07:00
dylan-copeland
8fc7079174
Bug fix.
2024-07-16 11:14:24 -07:00
Dylan Copeland
5fe5e0068d
Generalized spacing for forced refinements.
2024-07-15 21:24:42 -07:00
dylan-copeland
4e67781c2c
Corrected node scaling with respect to orientation.
2024-07-06 12:29:11 -07:00
dylan-copeland
65daeaa533
Bug fix.
2024-07-05 21:13:24 -07:00
dylan-copeland
281c0182be
Generalized to 3D.
2024-07-05 16:41:37 -07:00
Will Pazner
f88486fda1
Use Mesh::meshgen directly in Mesh::GetTypicalElementGeometry
2024-06-26 13:20:58 -07:00
Will Pazner
d8df6b8020
Add new overload of DGTraceIntegrator::GetRule
...
Also bring back old overload of DGDiffusionIntegrator::GetRule
2024-06-26 12:23:53 -07:00
dylan-copeland
061b6109a2
Added scale to mesh file format. Generalized TraverseEdge to use scale.
2024-06-25 16:03:48 -07:00
Will Pazner
1241960dc4
Merge remote-tracking branch 'origin/master' into pa-empty-partitions
...
# Conflicts:
# fem/gridfunc.cpp
2024-06-24 10:16:56 -07:00
Dylan Copeland
ee501168de
Generalized NCMesh to use arbitrary relative spacing in refinement.
2024-06-21 19:37:19 -07:00
Will Pazner
4c96ebc652
Revert 'GetTypicalFE' changes in tmop-check-metric miniapp
2024-06-21 08:39:20 -07:00
Will Pazner
06f60e28d5
Revert 'GetTypicalFE' changes to KDTree
2024-06-21 08:37:12 -07:00
Mittal, Ketan
10705f397f
[wip performace] minor + make style
2024-05-15 15:11:04 -07:00
Mittal, Ketan
bbb78602a4
WIP analyze fpt kernel performance theoretical vs actual speed
2024-05-15 14:48:10 -07:00
Mittal, Ketan
040c5b2450
minor clean up and documentation
2024-05-08 15:30:39 -07:00
Mittal, Ketan
8e7428fbc3
Merge branch 'master' of https://github.com/mfem/mfem into gslib-findpts-device
2024-05-07 16:37:04 -07:00
Mittal, Ketan
5cda5516ff
make style
2024-05-07 16:28:18 -07:00
Mittal, Ketan
b0060c136d
add leaner version of pfindpts
2024-05-07 11:55:55 -07:00
Mittal, Ketan
3d162b51a8
start miniapp for surface meshes
2024-05-02 12:03:28 -07:00
Mittal, Ketan
961882055b
fix 2D bug for bounding box check
2024-05-01 21:15:37 -07:00
Will Pazner
d86613219c
Fix bug in SubMeshUtils::BuildVdofToVdofMap
2024-05-01 10:51:34 -07:00
Will Pazner
63f977d03f
Use FiniteElementSpace::GetTypicalTraceElement throughout the PA code
2024-05-01 09:50:23 -07:00
Will Pazner
ccccdf1736
Add FiniteElementSpace::GetTypicalTraceElement
2024-05-01 09:50:08 -07:00
Will Pazner
3b6c6ce6fb
Variable order support in FiniteElementSpace::GetTraceElement
2024-05-01 09:49:55 -07:00
Will Pazner
c768c5f579
Add FiniteElementCollection::GetTraceFE
...
This is a variable-order version of TraceFiniteElementForGeometry, analogous to
FiniteElementCollection::GetFE, which is a variable-order version of
FiniteElementForGeometry.
2024-05-01 09:49:34 -07:00
Mittal, Ketan
30091d6561
add sample run to getsubmesh
2024-04-24 14:45:21 -07:00
Mittal, Ketan
c2722880b5
merge and resolve conflict
2024-04-24 14:44:28 -07:00
Mittal, Ketan
02def42421
add monitor for newton iterations and example to extract boundary meshes using submesh
2024-04-24 14:41:59 -07:00
Will Pazner
9aba2322fc
Replace some instances of GetElementBaseGeometry(0) with m.GetTypicalElementGeometry
2024-04-23 14:45:30 -07:00
Will Pazner
4af8539ec3
Support empty partitions in FaceQuadratureSpace
2024-04-23 14:45:30 -07:00
Will Pazner
a7eed94562
Replace many instances of GetFaceGeometry(0) with GetTypicalFaceGeometry()
2024-04-23 14:45:30 -07:00
Will Pazner
ec535699d8
Change signature of DGDiffusionIntegrator::GetRule
2024-04-23 14:45:30 -07:00
Will Pazner
8184de5c57
Support Mesh::EnsureNodes with empty partitions and "legacy" nodal FEC
2024-04-23 14:45:30 -07:00
Will Pazner
54f6694c16
Add Mesh::GetTypicalFaceGeometry
...
Analogous to Mesh::GetTypicalElementGeometry
2024-04-23 14:45:30 -07:00
Will Pazner
ef9043a122
Replace many instances of GetFE(0) with GetTypicalFE()
...
Also replace many instances of GetElementTransformation(0) with
GetTypicalElementTransformation() and instances of GetElementGeometry(0) with
GetTypicalElementGeometry().
Remove some "early returns" in PA code with empty partitions. The reasoning is
that the early returns create divergent code paths among different MPI ranks,
which can cause deadlocks if e.g. collectives are used in code paths on not all
ranks.
2024-04-23 14:45:30 -07:00
Will Pazner
d3855adba0
Use "typical" mesh elements in mass and convection PA
2024-04-22 18:15:18 -07:00
Will Pazner
a981a24dcc
Add Mesh::GetTypicalElementTransformation
2024-04-22 18:14:39 -07:00
Will Pazner
aab735263b
Add Element::TypeFromGeometry
2024-04-22 18:14:24 -07:00
Veselin Dobrev
966143b0ce
Some additions and tweaks to get ex14p to work with empty partitions
2024-04-22 17:35:14 -07:00
Ketan Mittal
01b3d0ae8b
fix typo in get_edge
2024-03-26 17:11:40 -07:00
Mittal, Ketan
ae862ca52d
kernel with alternate implementation
2024-03-26 14:20:15 -07:00
Mittal, Ketan
051499f343
output bounding box mesh and add findpts kernel utilizing more threads
2024-03-26 13:37:51 -07:00
Ketan Mittal
98ee0c0047
use gsl_mesh for nodes
2024-03-19 12:01:27 -07:00
Mittal, Ketan
d8a13d8da6
hash box test typo
2024-03-18 14:02:30 -07:00
Mittal, Ketan
87a9aa9f69
template kernel and minor refactoring
2024-03-18 13:12:42 -07:00
Ketan Mittal
e315b66aeb
minor - missing const specifier
2024-03-04 11:39:39 -08:00
Mittal, Ketan
fb54c7c59a
template 2D kernel and refactor loop over threads in 2D
2024-03-04 09:50:35 -08:00
Mittal, Ketan
72277751d7
copyright
2024-02-15 10:12:23 -08:00
Mittal, Ketan
c5ae059755
minor
2024-02-15 10:10:41 -08:00
Ketan Mittal
56eded3dc3
fix bug in 2D
2024-02-13 15:02:22 -08:00
Mittal, Ketan
08a4ed8197
try2: restore max size for shared memory
2024-02-13 11:18:46 -08:00
Mittal, Ketan
7026c0eba2
restore max size for shared memory
2024-02-13 11:16:15 -08:00
Mittal, Ketan
650dec9528
minor refactor
2024-02-13 10:58:38 -08:00
Mittal, Ketan
1f2e93b391
Merge branch 'master' of https://github.com/mfem/mfem into gslib-findpts-device
2024-02-12 15:26:22 -08:00
Mittal, Ketan
9792e8dbdd
working in 2D
2024-02-12 15:22:46 -08:00
Will Pazner
6e4baa3e4a
Allow IterativeSolverMonitor to indicate early convergence
2024-01-04 14:13:50 -08:00
Ketan Mittal
0bf89c6b62
working on lassen
2023-12-01 17:30:20 -08:00
Mittal, Ketan
cd01ff94f5
minor
2023-11-29 13:02:29 -08:00
Ketan Mittal
ab1c6c8652
working on lassen
2023-11-28 21:06:10 -08:00
Mittal, Ketan
13032f8ee9
interpolate local and make style
2023-11-20 14:56:36 -08:00
Ketan Mittal
393277c410
minor changes to make it work on lassen
2023-11-20 14:55:53 -08:00
Mittal, Ketan
75dbd8dd14
Merge branch 'master' of https://github.com/mfem/mfem into gslib-findpts-device
2023-11-20 13:39:36 -08:00
Mittal, Ketan
9047821947
add timers
2023-11-20 13:39:21 -08:00
Mittal, Ketan
a6fac7c19b
minor
2023-11-07 13:03:24 -08:00
Mittal, Ketan
128c3f7d73
interp local
2023-11-07 12:56:22 -08:00
Mittal, Ketan
0bc03e1128
make style
2023-10-30 17:37:53 -07:00
Mittal, Ketan
21fb6bc10f
remove use of static variables
2023-10-30 17:30:04 -07:00
Mittal, Ketan
ae4acc54d8
initial implementation for findpoints-local
2023-10-30 17:01:39 -07:00
camierjs
a280109316
Merge master in debug-device-test
2023-08-29 08:31:32 -07:00
Tzanio Kolev
9a8b604d84
Merge branch 'master' into debug-device-test
2023-06-04 13:33:52 -07:00
camierjs
ff79851e88
Merge master in debug-device-test
2023-05-14 09:50:35 -07:00
camierjs
02311615b6
Merge master in debug-device-test
2023-05-08 14:31:45 -07:00
camierjs
63b872bc1a
Merge master in debug-device-test
2023-05-04 08:57:00 -07:00
camierjs
9fc942016c
Merge master in debug-device-test
2023-05-03 15:46:37 -07:00
camierjs
fdb7de9df1
Merge master in debug-device-test
2023-04-18 13:31:02 -07:00
camierjs
bccace6aae
Merge master in debug-device-test
2023-04-18 10:37:34 -07:00
camierjs
a49d1f4e97
Merge master in debug-device-test
2023-04-17 08:22:39 -07:00
camierjs
9bb956700e
Avoid Windows inconsistent configuration with Catch signals
2023-04-14 10:52:12 -07:00
camierjs
4dbb958837
Merge master in debug-device-test
2023-04-14 10:23:42 -07:00
camierjs
85eea867fc
Update with Linux vs. macOS specificities
2023-04-14 10:22:45 -07:00
camierjs
a04705310c
Update test_debug_device test unit with SIGBUS errors
2023-04-14 09:27:34 -07:00
Stowell, Mark L
6fa5a0b096
Merge remote-tracking branch 'origin/master' into aniso-diffusion-dev
...
# Conflicts:
# fem/coefficient.cpp
# fem/coefficient.hpp
2019-04-01 11:27:41 -07:00
Stowell, Mark L
3bd8349909
Merge remote-tracking branch 'origin/master' into aniso-diffusion-dev
2018-11-08 18:00:03 -08:00
Stowell, Mark L
af82ee8560
Merge remote-tracking branch 'origin/master' into aniso-diffusion-dev
2018-10-20 12:18:07 -07:00
Stowell, Mark L
2ac542c720
Attempting to support 2D curl cleaning
2018-10-20 12:17:00 -07:00
Mark L. Stowell
e6f828a5fe
Attempting to add curl free projection...
2018-10-18 13:07:44 -07:00
Mark L. Stowell
4d756edd80
Adding DivergenceFree/Irrotational projectors for RT spaces
2018-10-18 10:29:50 -07:00
Stowell, Mark L
cf5bd1f5cc
make style
2018-10-18 00:17:32 -07:00
Stowell, Mark L
7173dd2002
Adding H1 diffusion solver
2018-10-18 00:16:56 -07:00
Stowell, Mark L
50182bf440
Adding perturbed elliptic case
2018-10-17 19:51:12 -07:00
Stowell, Mark L
24bfcc5165
Initializing a solution vector before solve
2018-10-17 10:20:38 -07:00
Stowell, Mark L
302f22f297
Switching to analytic evaluation of b vector field
2018-10-16 15:34:29 -07:00
Stowell, Mark L
1637fcd933
Adding argument to control lower bound of mesh size
2018-10-16 13:13:56 -07:00
Stowell, Mark L
2563506174
make style
2018-10-14 16:14:31 -07:00
Stowell, Mark L
60640c3f7e
Adding computation of full thermal flux
2018-10-14 10:39:39 -07:00
Stowell, Mark L
f221521203
make style
2018-10-14 10:12:37 -07:00
Stowell, Mark L
1d9e736af6
Adding a miniapp which solve for thermal flux in HDiv
2018-10-14 10:10:55 -07:00
Stowell, Mark L
d80dbfd99a
Adding flux computation
2018-10-10 16:46:17 -07:00
Stowell, Mark L
3f44043e60
Adding steady state anisotropic diffusion solver
2018-10-10 12:48:07 -07:00
Stowell, Mark L
b218959bca
Inserting the thermal flux solver
2018-10-03 10:33:45 -07:00
Stowell, Mark L
aee7bc9d43
Adding first draft of hybrid diffusion solver
2018-10-01 16:14:53 -07:00
Stowell, Mark L
31cac320d4
Bugfix in activation of nonlinear solver
2018-10-01 15:08:15 -07:00
Stowell, Mark L
e7e0fb0a88
Adding a specialized miniapp to duplicate results from the van Es papper
2018-09-30 21:47:54 -07:00
Stowell, Mark L
ba71d13980
Merge remote-tracking branch 'origin/master' into aniso-diffusion-dev
2018-09-25 13:04:15 -07:00
Stowell, Mark L
5c326a5535
Fixing a typo in a comment
2018-09-25 13:02:39 -07:00
Stowell, Mark L
9457f7e5b6
Switching to nonlinear solver
2018-09-24 15:45:49 -07:00
Stowell, Mark L
ff030ee970
Adding another time dependent test case
2018-09-24 12:45:36 -07:00
Stowell, Mark L
2be9e1f36c
Adding a steady state solver to the thermal miniapps
2018-09-24 12:45:03 -07:00
Stowell, Mark L
7671cd9f36
Merge remote-tracking branch 'origin/master' into aniso-diffusion-dev
2018-09-16 13:17:34 -07:00
Stowell, Mark L
f89a633fda
make style
2018-09-14 14:41:13 -07:00
Stowell, Mark L
4ce1cef6b8
Adding SetOperator methods to HyprePCG, HypreGMRES, HypreDiagScale, and HypreParaSails
2018-09-14 14:34:13 -07:00
Stowell, Mark L
c667bf3025
Fixing HypreGMRES::SetOperator method in the presence of a preconditioner
2018-09-14 13:47:29 -07:00
Stowell, Mark L
e1678afe40
Using new HypreGMRES with SetOperator method
2018-09-10 16:46:25 -07:00
Stowell, Mark L
c0291398ed
Implementing HypreGMRES::SetOperator method
2018-09-10 16:45:59 -07:00
Stowell, Mark L
0b4f10d79d
Debugging gradient check
2018-09-09 16:29:15 -07:00
Stowell, Mark L
8dfd0e1547
Adding NewtonSolver method to validate gradient
2018-09-09 16:28:18 -07:00
Stowell, Mark L
caf239c99a
Updating with time dependent source and exact solution
2018-09-09 00:39:58 -07:00
Stowell, Mark L
44c33aece0
Merge remote-tracking branch 'origin/master' into aniso-diffusion-dev
2018-09-08 23:59:16 -07:00
Stowell, Mark L
ed49856390
Merge branch 'aniso-diffusion-dev' of github.com:mfem/mfem into aniso-diffusion-dev
2018-09-06 14:13:18 -07:00
Stowell, Mark L
4fef6ca298
make style
2018-09-06 14:12:28 -07:00
Stowell, Mark L
d9d809e81c
Adding "thermal" to miniapps subdirectories
2018-09-06 14:12:16 -07:00
Stowell, Mark L
51e85ccd84
Fixing nonlinear solve and applying 'make style'
2018-09-06 14:11:54 -07:00
Mark L. Stowell
4304159303
Merge branch 'aniso-diffusion-dev' of github.com:mfem/mfem into aniso-diffusion-dev
2018-09-05 16:56:05 -07:00
Stowell, Mark L
6276268e52
Retain zeros to maintain sparsity pattern
2018-09-05 16:54:59 -07:00
Mark L. Stowell
580ae34842
Retaining zeros to maintain sparsity pattern
2018-09-05 16:51:10 -07:00
Stowell, Mark L
97eaf8efbc
Parallelizing the linear solves
2018-09-05 15:48:28 -07:00
Stowell, Mark L
e6621c9b0c
Parallel bug
2018-09-05 15:25:18 -07:00
Stowell, Mark L
461246f80e
Adding a missing overload
2018-09-05 13:29:10 -07:00
Stowell, Mark L
a5941ee72f
Bugfix: reinitializing matrices before reassembling
2018-09-05 11:10:09 -07:00
Stowell, Mark L
c4c2ceab59
Linear case now working
2018-09-05 10:15:17 -07:00
Stowell, Mark L
88b99a1719
Fixing vector dimension in vector grid functions
2018-09-05 10:14:52 -07:00
Stowell, Mark L
7aa7b4ee53
Adjusting initialization order so that vector size is known earlier
2018-09-03 11:19:27 -07:00
Stowell, Mark L
bcf87fee29
Modifying VectorGridFunctionCoefs to accept NULL pointers
2018-09-03 11:06:32 -07:00
Stowell, Mark L
2949dc5a46
Adding makefile for miniapps/thermal
2018-09-03 10:48:11 -07:00
Stowell, Mark L
b0dbadd007
Adding first draft of non-linear thermal diffusion solver
2018-09-03 10:19:34 -07:00
Stowell, Mark L
6ca1f95979
Adding scalar multiplication by a constant
2018-08-31 22:54:36 -07:00
Stowell, Mark L
39794585c4
Adding an Identity Matrix Coefficient
2018-08-31 16:50:02 -07:00
Stowell, Mark L
65a71259f1
Merge remote-tracking branch 'origin/elementwise-error-dev' into aniso-diffusion-dev
2018-08-31 16:49:37 -07:00
Stowell, Mark L
3f4e8324d4
Adding a coefficient which computes a unit vector field from a vector field
2018-08-29 14:26:29 -07:00
Stowell, Mark L
9fca398741
Adding ability to alter derived coefficients
2018-08-29 13:59:38 -07:00
Stowell, Mark L
a2b8f7a129
Merge remote-tracking branch 'origin/master' into aniso-diffusion-dev
2018-08-29 09:28:15 -07:00
Stowell, Mark L
a367631ce5
Adding various coefficients which are sums or products of other coefficients
2018-08-28 16:34:13 -07:00
Stowell, Mark L
d7718f5c57
make style
2018-08-28 14:51:48 -07:00
Stowell, Mark L
fe88c4685d
Adding coefficients to compute div, grad, or curl of grid functions.
2018-08-28 14:24:15 -07:00