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@@ -142,6 +142,10 @@ jobs:
|
||||
|
||||
continue-on-error: ${{ matrix.enzyme && true || false }}
|
||||
|
||||
# Enable ccache for all jobs except Windows (would need sccache).
|
||||
env:
|
||||
USE_CCACHE: ${{ matrix.os != 'windows-latest' }}
|
||||
|
||||
steps:
|
||||
# Fix 'No space left on device' errors for Ubuntu builds.
|
||||
- name: Run Actions Cleaner
|
||||
@@ -290,6 +294,52 @@ jobs:
|
||||
echo "OMPI_CC=$LLVM_PREFIX/bin/clang" >> $GITHUB_ENV
|
||||
echo "OMPI_CXX=$LLVM_PREFIX/bin/clang++" >> $GITHUB_ENV
|
||||
|
||||
# Restore the compiler cache (ccache). The key embeds the run id, so new
|
||||
# runs save a fresh snapshot; the restore-keys prefix warm-starts from the
|
||||
# most recent prior run (incl. the base branch for PRs).
|
||||
- name: cache ccache
|
||||
if: ${{ env.USE_CCACHE == 'true' }}
|
||||
uses: actions/cache@v5
|
||||
with:
|
||||
path: .ccache
|
||||
key: ccache-${{ matrix.os }}-${{ matrix.build-system }}-${{ matrix.target }}-${{ matrix.mpi }}-${{ matrix.hypre-target }}-${{ matrix.precision }}${{ matrix.enzyme && '-enzyme' || '' }}-${{ github.run_id }}
|
||||
restore-keys: |
|
||||
ccache-${{ matrix.os }}-${{ matrix.build-system }}-${{ matrix.target }}-${{ matrix.mpi }}-${{ matrix.hypre-target }}-${{ matrix.precision }}${{ matrix.enzyme && '-enzyme' || '' }}-
|
||||
|
||||
# Configure ccache and select how it is injected into the MFEM build:
|
||||
# - make: set CXX="ccache g++"; for MPI, OMPI_CXX="ccache g++" so mpicxx
|
||||
# runs ccache around g++ (not ccache around the mpicxx wrapper).
|
||||
# - cmake: set CMAKE_<LANG>_COMPILER_LAUNCHER=ccache.
|
||||
# - enzyme: wrap the brew clang++ via OMPI_CXX.
|
||||
# The chosen options are passed through build-mfem's 'config-options'
|
||||
# input (see the build step below).
|
||||
- name: configure ccache
|
||||
if: ${{ env.USE_CCACHE == 'true' }}
|
||||
run: |
|
||||
command -v ccache >/dev/null 2>&1 || {
|
||||
if [[ "${{ runner.os }}" == "Linux" ]]; then
|
||||
sudo apt-get update && sudo apt-get install -y ccache
|
||||
else
|
||||
brew install ccache
|
||||
fi
|
||||
}
|
||||
echo "CCACHE_DIR=${{ github.workspace }}/.ccache" >> $GITHUB_ENV
|
||||
echo "CCACHE_MAXSIZE=1G" >> $GITHUB_ENV
|
||||
echo "CCACHE_COMPILERCHECK=content" >> $GITHUB_ENV
|
||||
# Ignore header timestamps (restamped by each checkout) so direct mode hits.
|
||||
echo "CCACHE_SLOPPINESS=include_file_mtime,include_file_ctime,time_macros" >> $GITHUB_ENV
|
||||
# Hash absolute paths relative to the workspace.
|
||||
echo "CCACHE_BASEDIR=${{ github.workspace }}" >> $GITHUB_ENV
|
||||
if [[ "${{ matrix.enzyme }}" == "true" ]]; then
|
||||
echo "OMPI_CXX=ccache $LLVM_PREFIX/bin/clang++" >> $GITHUB_ENV
|
||||
elif [[ "${{ matrix.build-system }}" == "cmake" ]]; then
|
||||
echo 'CCACHE_CONFIG_OPTS=-DCMAKE_CXX_COMPILER_LAUNCHER=ccache -DCMAKE_C_COMPILER_LAUNCHER=ccache' >> $GITHUB_ENV
|
||||
else
|
||||
echo "OMPI_CXX=ccache g++" >> $GITHUB_ENV
|
||||
echo 'CCACHE_CONFIG_OPTS=CXX="ccache g++" MPICXX="mpicxx"' >> $GITHUB_ENV
|
||||
fi
|
||||
shell: bash
|
||||
|
||||
# MFEM build and test
|
||||
- name: build
|
||||
uses: mfem/github-actions/build-mfem@v2.7
|
||||
@@ -305,9 +355,14 @@ jobs:
|
||||
metis-dir: ${{ env.METIS_TOP_DIR }}
|
||||
mfem-dir: ${{ env.MFEM_TOP_DIR }}
|
||||
precision: ${{ matrix.precision }}
|
||||
config-options: ${{ matrix.config-opts }}
|
||||
config-options: ${{ matrix.config-opts }} ${{ env.CCACHE_CONFIG_OPTS }}
|
||||
library-only: ${{ matrix.target == 'dbg' && matrix.os != 'ubuntu-latest' }}
|
||||
|
||||
- name: ccache stats
|
||||
if: ${{ env.USE_CCACHE == 'true' }}
|
||||
run: ccache -s
|
||||
shell: bash
|
||||
|
||||
# Run checks (and only checks) on debug targets
|
||||
- name: checks
|
||||
if: matrix.build-system == 'make' && matrix.target == 'dbg'
|
||||
|
||||
@@ -0,0 +1,42 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
# This file is part of the MFEM library. For more information and source code
|
||||
# availability visit https://mfem.org.
|
||||
#
|
||||
# MFEM is free software; you can redistribute it and/or modify it under the
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
---
|
||||
# A closed PR's caches can never be restored again, so delete them to free
|
||||
# space against the 10 GB per-repo cache limit.
|
||||
name: Cleanup PR caches
|
||||
|
||||
on:
|
||||
pull_request:
|
||||
types: [closed]
|
||||
|
||||
permissions:
|
||||
actions: write
|
||||
|
||||
jobs:
|
||||
cleanup:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- name: Delete caches for the closed PR
|
||||
env:
|
||||
GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
|
||||
GH_REPO: ${{ github.repository }}
|
||||
PR_REF: refs/pull/${{ github.event.pull_request.number }}/merge
|
||||
run: |
|
||||
echo "Deleting caches for $PR_REF"
|
||||
while :; do
|
||||
ids=$(gh cache list --ref "$PR_REF" --limit 100 --json id --jq '.[].id')
|
||||
[ -n "$ids" ] || break
|
||||
echo "$ids" | while read -r id; do
|
||||
[ -n "$id" ] || continue
|
||||
echo "Deleting cache $id"
|
||||
gh cache delete "$id" || echo " (already gone)"
|
||||
done
|
||||
done
|
||||
@@ -13,6 +13,7 @@ name: "Checks"
|
||||
|
||||
permissions:
|
||||
actions: write
|
||||
pull-requests: read
|
||||
|
||||
on:
|
||||
push:
|
||||
@@ -29,6 +30,11 @@ concurrency:
|
||||
# by checking if the workflow trigger is 'push' ("github.event_name == 'push'")
|
||||
# and if we are in a fork ("github.event.pull_request.head.repo.full_name !=
|
||||
# github.repository").
|
||||
#
|
||||
# The logic for the branch-history check is slightly different, since that check
|
||||
# also inspects the PR's labels to allow for overriding failures. In this case,
|
||||
# we run on all 'pull_request' triggers, but only run for 'push' triggers that
|
||||
# do not correspond to any open PRs.
|
||||
|
||||
jobs:
|
||||
file-headers-check:
|
||||
@@ -128,10 +134,7 @@ jobs:
|
||||
|
||||
branch-history:
|
||||
if: |
|
||||
github.ref != 'refs/heads/next' &&
|
||||
github.ref != 'refs/heads/master' &&
|
||||
(github.event_name == 'push' ||
|
||||
github.event.pull_request.head.repo.full_name != github.repository)
|
||||
github.ref != 'refs/heads/next' && github.ref != 'refs/heads/master'
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- name: checkout mfem
|
||||
@@ -139,7 +142,27 @@ jobs:
|
||||
with:
|
||||
fetch-depth: 0
|
||||
|
||||
- name: check for pull request
|
||||
id: check_pr
|
||||
if: github.event_name == 'push'
|
||||
env:
|
||||
GH_TOKEN: ${{ github.token }}
|
||||
run: |
|
||||
pr_exists=$(gh pr list --repo "$GITHUB_REPOSITORY" \
|
||||
--head "$GITHUB_REF_NAME" \
|
||||
--state open \
|
||||
--json number \
|
||||
--jq 'length > 0')
|
||||
echo "pr_exists=$pr_exists" >> "$GITHUB_OUTPUT"
|
||||
|
||||
- name: branch-history
|
||||
id: branch_history
|
||||
if: |
|
||||
(github.event_name == 'pull_request' ||
|
||||
github.event_name == 'workflow_dispatch' ||
|
||||
steps.check_pr.outputs.pr_exists == 'false')
|
||||
continue-on-error: ${{ contains(github.event.pull_request.labels.*.name,
|
||||
'branch-history-override') }}
|
||||
run: |
|
||||
# We override origin to make sure we point to the main repo.
|
||||
# This is to have consistent test results on PRs from forks.
|
||||
@@ -147,3 +170,9 @@ jobs:
|
||||
git remote add origin https://github.com/mfem/mfem.git
|
||||
git checkout -b gh-actions-branch-history
|
||||
./config/githooks/pre-push --history
|
||||
|
||||
- name: report branch-history override
|
||||
if: steps.branch_history.outcome == 'failure'
|
||||
run: |
|
||||
echo "::warning::branch-history check failed, but the" \
|
||||
"'branch-history-override' label is set."
|
||||
|
||||
@@ -260,6 +260,7 @@ miniapps/meshing/polar-nc
|
||||
miniapps/meshing/mesh-quality
|
||||
miniapps/meshing/hpref
|
||||
miniapps/meshing/phpref
|
||||
miniapps/meshing/pref321
|
||||
miniapps/meshing/mobius-strip.mesh
|
||||
miniapps/meshing/klein-bottle.mesh
|
||||
miniapps/meshing/toroid-*.mesh
|
||||
@@ -355,6 +356,11 @@ miniapps/performance/refined.mesh
|
||||
miniapps/performance/mesh.*
|
||||
miniapps/performance/sol.*
|
||||
|
||||
miniapps/plasma/g_eqdsk_viewer
|
||||
miniapps/plasma/gnuplot_eqdsk.*
|
||||
miniapps/plasma/G_EQDSK_Viewer*
|
||||
miniapps/plasma/ParaView
|
||||
|
||||
miniapps/shifted/distance
|
||||
miniapps/shifted/ParaViewDistance
|
||||
miniapps/shifted/ParaViewLSF
|
||||
|
||||
@@ -102,12 +102,14 @@ report_baseline:
|
||||
mkdir -p ${MACHINE_NAME}
|
||||
rundir="${MACHINE_NAME}/$(date +%Y-%m-%d)-gitlab-${BASELINE_TEST}-${CI_COMMIT_REF_SLUG}"
|
||||
rundir=$(${CI_PROJECT_DIR}/.gitlab/scripts/safe_create_rundir ${rundir})
|
||||
cp ${CI_PROJECT_DIR}/${ARTIFACTS_DIR}/* ${rundir}
|
||||
status=0
|
||||
cp ${CI_PROJECT_DIR}/${ARTIFACTS_DIR}/* ${rundir} || { status=1; }
|
||||
printf "%s\n" "" "Pipeline URL:" "$CI_PIPELINE_URL" \
|
||||
>> ${rundir}/pipeline.txt
|
||||
# We create an autotest-email.html file, because that's how we signal
|
||||
# that there was an error / diff (temporary).
|
||||
if [[ -f ${rundir}/${BASELINE_TEST}.err ]] || \
|
||||
if [[ $status -ne 0 ]] || \
|
||||
[[ -f ${rundir}/${BASELINE_TEST}.err ]] || \
|
||||
[[ -f ${rundir}/${BASELINE_TEST}-${MACHINE_NAME}.diff ]]; then
|
||||
cp ${rundir}/pipeline.txt ${rundir}/autotest-email.html
|
||||
fi
|
||||
|
||||
@@ -46,8 +46,19 @@ Discretization improvements
|
||||
|
||||
- Extend FindPointsGSLIB to support surface meshes.
|
||||
|
||||
- Added support for complex-valued mixed bilinear forms via the new classes
|
||||
MixedSesquilinearForm and ParMixedSesquilinearForm, mirroring the existing
|
||||
SesquilinearForm classes. Rectangular complex operators are now also
|
||||
handled correctly by ComplexSparseMatrix::GetSystemMatrix and
|
||||
ComplexHypreParMatrix::GetSystemMatrix, which previously assumed equal
|
||||
trial and test spaces.
|
||||
|
||||
Meshing improvements
|
||||
--------------------
|
||||
- Added support for nonuniform anisotropic mesh refinement on parallel quad/hex
|
||||
meshes with arbitrary spacing in each direction. This enables in particular
|
||||
3:1 refinement in parallel, as demonstrated in the new meshing miniapp pref321.
|
||||
|
||||
- Added option to guarantee mesh validity during TMOP-based r-adaptivity, using
|
||||
bounds on the determinant of the mesh transformation Jacobian.
|
||||
|
||||
@@ -70,6 +81,15 @@ Linear and nonlinear solvers
|
||||
|
||||
GPU computing
|
||||
-------------
|
||||
- Improved partial assembly for VectorDivergenceIntegrator with shared-memory
|
||||
kernels, kernel registration, and transpose support.
|
||||
|
||||
- Improved partial-assembly diagonal kernels for VectorMassIntegrator (shared-
|
||||
memory specializations) and ElasticityIntegrator (no scratch Q-vector).
|
||||
|
||||
- Added PA gradient and diagonal support for VectorConvectionNLFIntegrator
|
||||
(AssembleGradPA, AddMultGradPA, AssembleGradDiagonalPA).
|
||||
|
||||
- Added device assembly support for 3D H(curl) VectorFEDomainLFIntegrator.
|
||||
|
||||
- Added NVIDIA cuDSS library interface. Implementation examples have been
|
||||
@@ -78,6 +98,12 @@ GPU computing
|
||||
|
||||
- Allow specifying GPU kernel launch bounds for native and RAJA GPU backends.
|
||||
|
||||
- Changed VectorFEMassIntegrator to use kernel specialization dispatch for
|
||||
partial assembly.
|
||||
|
||||
- Added support for FiniteElement::MapType::INTEGRAL spaces to
|
||||
QuadratureInterpolator.
|
||||
|
||||
New and updated examples and miniapps
|
||||
-------------------------------------
|
||||
- The Lorentz miniapp (in miniapps/electromagnetics) has been updated to
|
||||
|
||||
@@ -239,6 +239,13 @@ else()
|
||||
set(MFEM_DEBUG OFF)
|
||||
endif()
|
||||
|
||||
# Shadow warnings for clang only; GCC's -Wshadow flags more.
|
||||
if (CMAKE_CXX_COMPILER_ID MATCHES "Clang")
|
||||
set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -pedantic -Wall -Wshadow")
|
||||
elseif (CMAKE_CXX_COMPILER_ID STREQUAL "GNU")
|
||||
set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -pedantic -Wall")
|
||||
endif()
|
||||
|
||||
# Shared build on Windows
|
||||
if (WIN32 AND BUILD_SHARED_LIBS)
|
||||
# CMAKE_WINDOWS_EXPORT_ALL_SYMBOLS works only with MSVC?
|
||||
|
||||
+7
-1
@@ -27,7 +27,13 @@ MPICXX = mpicxx
|
||||
|
||||
BASE_FLAGS = -std=c++17
|
||||
OPTIM_FLAGS = -O3 $(BASE_FLAGS)
|
||||
DEBUG_FLAGS = -g $(XCOMPILER)-Wall $(BASE_FLAGS)
|
||||
|
||||
# Shadow warnings for clang only; GCC's -Wshadow flags more.
|
||||
SHADOW_WARNING_FLAG = $(if $(findstring clang,\
|
||||
$(shell $(MFEM_HOST_CXX) --version 2>/dev/null)),-Wshadow,)
|
||||
WARNING_FLAGS = -pedantic -Wall $(SHADOW_WARNING_FLAG)
|
||||
|
||||
DEBUG_FLAGS = $(strip -g $(addprefix $(XCOMPILER),$(WARNING_FLAGS)) $(BASE_FLAGS))
|
||||
|
||||
# Prefixes for passing flags to the compiler and linker when using CXX or MPICXX
|
||||
CXX_XCOMPILER =
|
||||
|
||||
@@ -39,3 +39,8 @@ when a picture was added for documentation.
|
||||
If that is the case, make sure the failure is indeed justified, and rerun the
|
||||
push command with the `--no-verify` option. This will skip the hooks, allowing
|
||||
you to push those changes.
|
||||
|
||||
The `branch-history` check is run automatically through GitHub Actions. If a
|
||||
branch is known to have a large number of changes that are legitimate, the
|
||||
check can be overridden by setting the label 'branch-history-override' on the
|
||||
pull request.
|
||||
|
||||
@@ -0,0 +1,38 @@
|
||||
MFEM mesh v1.0
|
||||
|
||||
#
|
||||
# MFEM Geometry Types (see fem/geom.hpp):
|
||||
#
|
||||
# POINT = 0
|
||||
# SEGMENT = 1
|
||||
# TRIANGLE = 2
|
||||
# SQUARE = 3
|
||||
# TETRAHEDRON = 4
|
||||
# CUBE = 5
|
||||
# PRISM = 6
|
||||
# PYRAMID = 7
|
||||
|
||||
dimension
|
||||
2
|
||||
|
||||
elements
|
||||
2
|
||||
1 3 0 1 4 3
|
||||
1 2 1 2 4
|
||||
|
||||
boundary
|
||||
5
|
||||
1 1 0 1
|
||||
1 1 1 2
|
||||
1 1 2 4
|
||||
1 1 4 3
|
||||
1 1 3 0
|
||||
|
||||
vertices
|
||||
5
|
||||
2
|
||||
0 0
|
||||
1 0
|
||||
2 0
|
||||
0 1
|
||||
1 1
|
||||
@@ -201,6 +201,7 @@ namespace mfem {
|
||||
* - <a class="el" href="nurbs__naca__cmesh_8cpp_source.html">NURBS NACA Mesher</a>: generate NURBS based mesh around a NACA foil
|
||||
* - <a class="el" href="nurbs__printfunc_8cpp_source.html">NURBS Printer</a>: print the NURBS-basis
|
||||
* - <a class="el" href="nurbs__mesh_info_8cpp_source.html">NURBS Mesh info</a>: print the info of a NURBS mesh
|
||||
* - <a class="el" href="nurbs__surface_8cpp_source.html">NURBS Surface</a>: interpolate a 3D Surface in a NURBS Patch
|
||||
*
|
||||
* <H3>Miniapps</H3>
|
||||
* - <a class="el" href="volta_8cpp_source.html">Volta</a>: simple electrostatics simulation code
|
||||
@@ -245,6 +246,9 @@ namespace mfem {
|
||||
* - <a class="el" href="pdiffusion_8cpp_source.html">DPG Diffusion example</a>: DPG formulation for the diffusion problem
|
||||
* - <a class="el" href="pmaxwell_8cpp_source.html">DPG Maxwell example</a>: DPG formulation for the indefinite Maxwell problem
|
||||
* - <a class="el" href="lor__elast_8cpp_source.html">LOR Elasticity</a>: solve linear elasticity with LOR preconditioning on GPUs
|
||||
* - <a class="el" href="reflector_8cpp_source.html">Reflector Miniapp</a>: reflect a mesh about a plane
|
||||
* - <a class="el" href="ref321_8cpp_source.html">3:1 Refinement Miniapp</a>: perform 3:1 anisotropic mesh refinements
|
||||
* - <a class="el" href="pref321_8cpp_source.html">3:1 Refinement Miniapp</a>: parallel 3:1 anisotropic mesh refinements
|
||||
*
|
||||
* See also the <a class="el" href="https://mfem.org/examples/">examples documentation</a> online.
|
||||
*/
|
||||
|
||||
@@ -57,6 +57,8 @@ set(SRCS
|
||||
integ/lininteg_domain_grad.cpp
|
||||
integ/lininteg_domain_vectorfe.cpp
|
||||
integ/nonlininteg_vecconvection_pa.cpp
|
||||
integ/nonlininteg_vecconvection_pa_diag.cpp
|
||||
integ/nonlininteg_vecconvection_pa_grad.cpp
|
||||
integ/nonlininteg_vecconvection_mf.cpp
|
||||
coefficient.cpp
|
||||
complex_fem.cpp
|
||||
@@ -204,7 +206,11 @@ set(HDRS
|
||||
integ/bilininteg_mass_kernels.hpp
|
||||
integ/bilininteg_mass_pa_simplices.hpp
|
||||
integ/bilininteg_vecdiffusion_pa.hpp
|
||||
integ/bilininteg_vecdiv_pa.hpp
|
||||
integ/bilininteg_vecmass_pa.hpp
|
||||
integ/nonlininteg_vecconvection_pa.hpp
|
||||
integ/nonlininteg_vecconvection_pa_diag.hpp
|
||||
integ/nonlininteg_vecconvection_pa_grad.hpp
|
||||
coefficient.hpp
|
||||
complex_fem.hpp
|
||||
convergence.hpp
|
||||
|
||||
+54
-5
@@ -2689,14 +2689,22 @@ public:
|
||||
void AddMultMF(const Vector &x, Vector &y) const override;
|
||||
bool SupportsCeed() const override { return DeviceCanUseCeed(); }
|
||||
|
||||
// PA AddMultPA kernels
|
||||
using VectorMassAddMultPAType =
|
||||
void(*)(const int, const int,
|
||||
const Array<real_t>&, const Vector&,
|
||||
const Vector&, Vector&, const int, const int);
|
||||
|
||||
MFEM_REGISTER_KERNELS(VectorMassAddMultPA,
|
||||
VectorMassAddMultPAType,
|
||||
(int, int, int));
|
||||
|
||||
// PA DiagonalPA kernels
|
||||
using VectorMassAssembleDiagonalPAType =
|
||||
void(*)(const int, const int, const int,
|
||||
const real_t*, const real_t*, real_t*);
|
||||
MFEM_REGISTER_KERNELS(VectorMassAssembleDiagonalPA,
|
||||
VectorMassAssembleDiagonalPAType,
|
||||
(int /*dim*/, int /*q1d*/));
|
||||
};
|
||||
|
||||
|
||||
@@ -2995,11 +3003,10 @@ public:
|
||||
vector (diagonal matrix), or matrix), trial function $u$ is in $H(curl$ or
|
||||
$H(div)$, and test function $v$ is in $H(curl$, $H(div)$, or $v=(v_1,\dots,v_n)$, where
|
||||
$v_i$ are in $H^1$. */
|
||||
class VectorFEMassIntegrator: public BilinearFormIntegrator
|
||||
class VectorFEMassIntegrator : public BilinearFormIntegrator
|
||||
{
|
||||
private:
|
||||
void Init(Coefficient *q, DiagonalMatrixCoefficient *dq, MatrixCoefficient *mq)
|
||||
{ Q = q; DQ = dq; MQ = mq; }
|
||||
void Init(Coefficient *q, DiagonalMatrixCoefficient *dq, MatrixCoefficient *mq);
|
||||
|
||||
#ifndef MFEM_THREAD_SAFE
|
||||
Vector shape;
|
||||
@@ -3022,7 +3029,8 @@ protected:
|
||||
const DofToQuad *mapsOtest; ///< Not owned. DOF-to-quad map, open.
|
||||
const DofToQuad *mapsCtest; ///< Not owned. DOF-to-quad map, closed.
|
||||
const GeometricFactors *geom; ///< Not owned
|
||||
int dim, ne, nq, dofs1D, dofs1Dtest, quad1D, trial_fetype, test_fetype;
|
||||
int dim, ne, nq, dofs1D, dofs1Dtest, quad1D;
|
||||
FiniteElement::DerivType trial_fetype, test_fetype;
|
||||
bool symmetric = true; ///< False if using a nonsymmetric matrix coefficient
|
||||
|
||||
public:
|
||||
@@ -3053,6 +3061,29 @@ public:
|
||||
const bool add) override;
|
||||
|
||||
const Coefficient *GetCoefficient() const { return Q; }
|
||||
|
||||
using ApplyKernelType =
|
||||
void (*)(const int NE, bool symmetric, const bool scalar_coeff,
|
||||
const Array<real_t> &trialBO, const Array<real_t> &trialBC,
|
||||
const Array<real_t> &testBOt, const Array<real_t> &testBCt,
|
||||
const Vector &pa_data, const Vector &x, Vector &y,
|
||||
const int triald1d, const int testd1d, const int q1d);
|
||||
|
||||
/// parameters: trial_fetype, test_fetype, ndims, trial_d1d, test_d1d, q1d
|
||||
MFEM_REGISTER_KERNELS(ApplyPAKernels, ApplyKernelType,
|
||||
(FiniteElement::DerivType, FiniteElement::DerivType,
|
||||
int, int, int, int));
|
||||
|
||||
struct Kernels { Kernels(); };
|
||||
|
||||
template <FiniteElement::DerivType TrialType,
|
||||
FiniteElement::DerivType TestType, int DIM, int TRIAL_D1D,
|
||||
int TEST_D1D, int Q1D>
|
||||
static void AddSpecialization()
|
||||
{
|
||||
ApplyPAKernels::Specialization<TrialType, TestType, DIM, TRIAL_D1D,
|
||||
TEST_D1D, Q1D>::Add();
|
||||
}
|
||||
};
|
||||
|
||||
/** Integrator for $(Q \nabla \cdot u, v)$ where $u=(u_1,\cdots,u_n)$ and all $u_i$ are in the same
|
||||
@@ -3098,6 +3129,24 @@ public:
|
||||
void AddMultPA(const Vector &x, Vector &y) const override;
|
||||
void AddMultTransposePA(const Vector &x, Vector &y) const override;
|
||||
|
||||
using VectorDivergenceAddMultPAType =
|
||||
void (*)(const int ne,
|
||||
const Array<real_t> &b, const Array<real_t> &g, const Array<real_t> &bt,
|
||||
const Vector &op, const Vector &x, Vector &y,
|
||||
const int tr_d1d, const int te_d1d, const int q1d);
|
||||
MFEM_REGISTER_KERNELS(VectorDivergenceAddMultPA,
|
||||
VectorDivergenceAddMultPAType,
|
||||
(int, int, int, int));
|
||||
|
||||
using VectorDivergenceAddMultTransposePAType =
|
||||
void (*)(const int ne,
|
||||
const Array<real_t> &bt, const Array<real_t> >, const Array<real_t> &b,
|
||||
const Vector &q, const Vector &x, Vector &y,
|
||||
const int tr_d1d, const int te_d1d, const int q1d);
|
||||
MFEM_REGISTER_KERNELS(VectorDivergenceAddMultTransposePA,
|
||||
VectorDivergenceAddMultTransposePAType,
|
||||
(int, int, int, int));
|
||||
|
||||
static const IntegrationRule &GetRule(const FiniteElement &trial_fe,
|
||||
const FiniteElement &test_fe,
|
||||
const ElementTransformation &Trans);
|
||||
|
||||
+856
-8
@@ -718,8 +718,8 @@ SesquilinearForm::FormLinearSystem(const Array<int> &ess_tdof_list,
|
||||
|
||||
// A = A_r + i A_i
|
||||
A.Clear();
|
||||
if ( A_r.Type() == Operator::MFEM_SPARSEMAT ||
|
||||
A_i.Type() == Operator::MFEM_SPARSEMAT )
|
||||
if ((!A_r.Ptr() || A_r.Type() == Operator::MFEM_SPARSEMAT) &&
|
||||
(!A_i.Ptr() || A_i.Type() == Operator::MFEM_SPARSEMAT))
|
||||
{
|
||||
ComplexSparseMatrix * A_sp =
|
||||
new ComplexSparseMatrix(A_r.As<SparseMatrix>(),
|
||||
@@ -779,8 +779,8 @@ SesquilinearForm::FormSystemMatrix(const Array<int> &ess_tdof_list,
|
||||
|
||||
// A = A_r + i A_i
|
||||
A.Clear();
|
||||
if ( A_r.Type() == Operator::MFEM_SPARSEMAT ||
|
||||
A_i.Type() == Operator::MFEM_SPARSEMAT )
|
||||
if ((!A_r.Ptr() || A_r.Type() == Operator::MFEM_SPARSEMAT) &&
|
||||
(!A_i.Ptr() || A_i.Type() == Operator::MFEM_SPARSEMAT))
|
||||
{
|
||||
ComplexSparseMatrix * A_sp =
|
||||
new ComplexSparseMatrix(A_r.As<SparseMatrix>(),
|
||||
@@ -843,6 +843,426 @@ SesquilinearForm::Update(FiniteElementSpace *nfes)
|
||||
if ( blfi ) { blfi->Update(nfes); }
|
||||
}
|
||||
|
||||
bool
|
||||
MixedSesquilinearForm::RealInteg()
|
||||
{
|
||||
int nint = mblfr->GetDBFI()->Size() + mblfr->GetBBFI()->Size() +
|
||||
mblfr->GetFBFI()->Size() + mblfr->GetBFBFI()->Size() +
|
||||
mblfr->GetTFBFI()->Size() + mblfr->GetBTFBFI()->Size();
|
||||
return (nint != 0);
|
||||
}
|
||||
|
||||
bool
|
||||
MixedSesquilinearForm::ImagInteg()
|
||||
{
|
||||
int nint = mblfi->GetDBFI()->Size() + mblfi->GetBBFI()->Size() +
|
||||
mblfi->GetFBFI()->Size() + mblfi->GetBFBFI()->Size() +
|
||||
mblfi->GetTFBFI()->Size() + mblfi->GetBTFBFI()->Size();
|
||||
return (nint != 0);
|
||||
}
|
||||
|
||||
MixedSesquilinearForm::MixedSesquilinearForm(FiniteElementSpace * trial_fes,
|
||||
FiniteElementSpace * test_fes,
|
||||
ComplexOperator::Convention convention)
|
||||
: conv(convention),
|
||||
mblfr(new mfem::MixedBilinearForm(trial_fes, test_fes)),
|
||||
mblfi(new mfem::MixedBilinearForm(trial_fes, test_fes))
|
||||
{
|
||||
}
|
||||
|
||||
MixedSesquilinearForm::MixedSesquilinearForm(FiniteElementSpace * trial_fes,
|
||||
FiniteElementSpace * test_fes,
|
||||
MixedBilinearForm * bfr,
|
||||
MixedBilinearForm * bfi,
|
||||
ComplexOperator::Convention convention)
|
||||
: conv(convention),
|
||||
mblfr(new MixedBilinearForm(trial_fes, test_fes, bfr)),
|
||||
mblfi(new MixedBilinearForm(trial_fes, test_fes, bfi))
|
||||
{
|
||||
}
|
||||
|
||||
MixedSesquilinearForm::~MixedSesquilinearForm()
|
||||
{
|
||||
delete mblfr;
|
||||
delete mblfi;
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
mblfr->AddDomainIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
mblfi->AddDomainIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & elem_marker)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
mblfr->AddDomainIntegrator(bfi_real, elem_marker);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
mblfi->AddDomainIntegrator(bfi_imag, elem_marker);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::AddBoundaryIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
mblfr->AddBoundaryIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
mblfi->AddBoundaryIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::AddBoundaryIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
mblfr->AddBoundaryIntegrator(bfi_real, bdr_marker);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
mblfi->AddBoundaryIntegrator(bfi_imag, bdr_marker);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::AddInteriorFaceIntegrator(BilinearFormIntegrator *
|
||||
bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
mblfr->AddInteriorFaceIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
mblfi->AddInteriorFaceIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::AddBdrFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
mblfr->AddBdrFaceIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
mblfi->AddBdrFaceIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::AddBdrFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
mblfr->AddBdrFaceIntegrator(bfi_real, bdr_marker);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
mblfi->AddBdrFaceIntegrator(bfi_imag, bdr_marker);
|
||||
}
|
||||
}
|
||||
|
||||
void MixedSesquilinearForm::AddTraceFaceIntegrator(BilinearFormIntegrator *
|
||||
bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
mblfr->AddTraceFaceIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
mblfi->AddTraceFaceIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void MixedSesquilinearForm::AddBdrTraceFaceIntegrator(BilinearFormIntegrator
|
||||
*bfi_real,
|
||||
BilinearFormIntegrator *bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
mblfr->AddBdrTraceFaceIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
mblfi->AddBdrTraceFaceIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void MixedSesquilinearForm::AddBdrTraceFaceIntegrator(BilinearFormIntegrator
|
||||
*bfi_real,
|
||||
BilinearFormIntegrator *bfi_imag,
|
||||
Array<int> &bdr_marker)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
mblfr->AddBdrTraceFaceIntegrator(bfi_real, bdr_marker);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
mblfi->AddBdrTraceFaceIntegrator(bfi_imag, bdr_marker);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::Assemble(int skip_zeros)
|
||||
{
|
||||
mblfr->Assemble(skip_zeros);
|
||||
mblfi->Assemble(skip_zeros);
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::Finalize(int skip_zeros)
|
||||
{
|
||||
mblfr->Finalize(skip_zeros);
|
||||
mblfi->Finalize(skip_zeros);
|
||||
}
|
||||
|
||||
ComplexSparseMatrix *
|
||||
MixedSesquilinearForm::AssembleComplexSparseMatrix()
|
||||
{
|
||||
return new mfem::ComplexSparseMatrix(
|
||||
&mblfr->SpMat(), &mblfi->SpMat(), false, false, conv);
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::FormRectangularLinearSystem(const Array<int> &
|
||||
ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
Vector & x,
|
||||
Vector & b,
|
||||
OperatorHandle & A,
|
||||
Vector & X,
|
||||
Vector & B)
|
||||
{
|
||||
FiniteElementSpace * fes_trial = mblfr->TrialFESpace();
|
||||
FiniteElementSpace * fes_test = mblfr->TestFESpace();
|
||||
const int vsize_trial = fes_trial->GetVSize();
|
||||
const int vsize_test = fes_test->GetVSize();
|
||||
|
||||
// Allocate temporary Vector
|
||||
Vector b_0;
|
||||
b_0.UseDevice(true);
|
||||
b_0.SetSize(vsize_test);
|
||||
b_0 = 0.0;
|
||||
|
||||
// Extract the real and imaginary parts of the input Vectors
|
||||
MFEM_ASSERT(x.Size() == 2 * vsize_trial,
|
||||
"Input GridFunction of incorrect size!");
|
||||
x.Read();
|
||||
Vector x_r;
|
||||
x_r.MakeRef(x, 0, vsize_trial);
|
||||
Vector x_i;
|
||||
x_i.MakeRef(x, vsize_trial, vsize_trial);
|
||||
|
||||
MFEM_ASSERT(b.Size() == 2 * vsize_test, "Input LinearForm of incorrect size!");
|
||||
b.Read();
|
||||
Vector b_r;
|
||||
b_r.MakeRef(b, 0, vsize_test);
|
||||
Vector b_i;
|
||||
b_i.MakeRef(b, vsize_test, vsize_test);
|
||||
|
||||
if (conv == ComplexOperator::BLOCK_SYMMETRIC)
|
||||
{
|
||||
b_i *= -1.0;
|
||||
}
|
||||
|
||||
const int tvsize_trial = fes_trial->GetTrueVSize();
|
||||
const int tvsize_test = fes_test->GetTrueVSize();
|
||||
OperatorHandle A_r, A_i;
|
||||
|
||||
X.UseDevice(true);
|
||||
X.SetSize(2 * tvsize_trial);
|
||||
X = 0.0;
|
||||
|
||||
B.UseDevice(true);
|
||||
B.SetSize(2 * tvsize_test);
|
||||
B = 0.0;
|
||||
|
||||
Vector X_r;
|
||||
X_r.MakeRef(X, 0, tvsize_trial);
|
||||
Vector X_i;
|
||||
X_i.MakeRef(X, tvsize_trial, tvsize_trial);
|
||||
Vector B_r;
|
||||
B_r.MakeRef(B, 0, tvsize_test);
|
||||
Vector B_i;
|
||||
B_i.MakeRef(B, tvsize_test, tvsize_test);
|
||||
|
||||
Vector X_0, B_0;
|
||||
|
||||
if (RealInteg())
|
||||
{
|
||||
b_0 = b_r;
|
||||
mblfr->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_r, b_0, A_r, X_0, B_0);
|
||||
X_r = X_0;
|
||||
B_r = B_0;
|
||||
|
||||
b_0 = b_i;
|
||||
mblfr->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_i, b_0, A_r, X_0, B_0);
|
||||
X_i = X_0;
|
||||
B_i = B_0;
|
||||
|
||||
if (ImagInteg())
|
||||
{
|
||||
b_0 = 0.0;
|
||||
mblfi->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_i, b_0, A_i, X_0, B_0);
|
||||
B_r -= B_0;
|
||||
|
||||
b_0 = 0.0;
|
||||
mblfi->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_r, b_0, A_i, X_0, B_0);
|
||||
B_i += B_0;
|
||||
}
|
||||
}
|
||||
else if (ImagInteg())
|
||||
{
|
||||
b_0 = b_i;
|
||||
mblfi->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_r, b_0, A_i, X_0, B_0);
|
||||
X_r = X_0;
|
||||
B_i = B_0;
|
||||
|
||||
b_0 = b_r;
|
||||
b_0 *= -1.0;
|
||||
mblfi->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_i, b_0, A_i, X_0, B_0);
|
||||
X_i = X_0;
|
||||
B_r = B_0;
|
||||
B_r *= -1.0;
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Real and Imaginary part of the Mixed Sesquilinear form are empty");
|
||||
}
|
||||
|
||||
if (conv == ComplexOperator::BLOCK_SYMMETRIC)
|
||||
{
|
||||
B_i *= -1.0;
|
||||
b_i *= -1.0;
|
||||
}
|
||||
|
||||
x_r.SyncAliasMemory(x);
|
||||
x_i.SyncAliasMemory(x);
|
||||
b_r.SyncAliasMemory(b);
|
||||
b_i.SyncAliasMemory(b);
|
||||
|
||||
X_r.SyncAliasMemory(X);
|
||||
X_i.SyncAliasMemory(X);
|
||||
B_r.SyncAliasMemory(B);
|
||||
B_i.SyncAliasMemory(B);
|
||||
|
||||
// A = A_r + i A_i
|
||||
A.Clear();
|
||||
if ((!A_r.Ptr() || A_r.Type() == Operator::MFEM_SPARSEMAT) &&
|
||||
(!A_i.Ptr() || A_i.Type() == Operator::MFEM_SPARSEMAT))
|
||||
{
|
||||
ComplexSparseMatrix * A_hyp =
|
||||
new ComplexSparseMatrix(A_r.As<SparseMatrix>(),
|
||||
A_i.As<SparseMatrix>(),
|
||||
A_r.OwnsOperator(),
|
||||
A_i.OwnsOperator(),
|
||||
conv);
|
||||
A.Reset<ComplexSparseMatrix>(A_hyp, true);
|
||||
}
|
||||
else
|
||||
{
|
||||
ComplexOperator * A_op = new ComplexOperator(A_r.As<Operator>(),
|
||||
A_i.As<Operator>(),
|
||||
A_r.OwnsOperator(),
|
||||
A_i.OwnsOperator(),
|
||||
conv);
|
||||
A.Reset<ComplexOperator>(A_op, true);
|
||||
}
|
||||
A_r.SetOperatorOwner(false);
|
||||
A_i.SetOperatorOwner(false);
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::FormRectangularSystemMatrix(const mfem::Array<int> &
|
||||
ess_trial_tdof_list,
|
||||
const mfem::Array<int> & ess_test_tdof_list,
|
||||
mfem::OperatorHandle & A)
|
||||
{
|
||||
OperatorHandle A_r, A_i;
|
||||
if (RealInteg())
|
||||
{
|
||||
mblfr->FormRectangularSystemMatrix(ess_trial_tdof_list, ess_test_tdof_list,
|
||||
A_r);
|
||||
}
|
||||
if (ImagInteg())
|
||||
{
|
||||
mblfi->FormRectangularSystemMatrix(ess_trial_tdof_list, ess_test_tdof_list,
|
||||
A_i);
|
||||
}
|
||||
if (!RealInteg() && !ImagInteg())
|
||||
{
|
||||
MFEM_ABORT("Both Real and Imaginary part of the Mixed Sesquilinear form are empty");
|
||||
}
|
||||
|
||||
// A = A_r + i A_i
|
||||
A.Clear();
|
||||
if ((!A_r.Ptr() || A_r.Type() == Operator::MFEM_SPARSEMAT) &&
|
||||
(!A_i.Ptr() || A_i.Type() == Operator::MFEM_SPARSEMAT))
|
||||
{
|
||||
ComplexSparseMatrix * A_hyp =
|
||||
new ComplexSparseMatrix(A_r.As<SparseMatrix>(),
|
||||
A_i.As<SparseMatrix>(),
|
||||
A_r.OwnsOperator(),
|
||||
A_i.OwnsOperator(),
|
||||
conv);
|
||||
A.Reset<ComplexSparseMatrix>(A_hyp, true);
|
||||
}
|
||||
else
|
||||
{
|
||||
ComplexOperator * A_op = new ComplexOperator(A_r.As<Operator>(),
|
||||
A_i.As<Operator>(),
|
||||
A_r.OwnsOperator(),
|
||||
A_i.OwnsOperator(),
|
||||
conv);
|
||||
A.Reset<ComplexOperator>(A_op, true);
|
||||
}
|
||||
A_r.SetOperatorOwner(false);
|
||||
A_i.SetOperatorOwner(false);
|
||||
}
|
||||
|
||||
void
|
||||
MixedSesquilinearForm::Update()
|
||||
{
|
||||
mblfr->Update();
|
||||
mblfi->Update();
|
||||
}
|
||||
|
||||
|
||||
#ifdef MFEM_USE_MPI
|
||||
|
||||
@@ -1614,8 +2034,8 @@ ParSesquilinearForm::FormLinearSystem(const Array<int> &ess_tdof_list,
|
||||
|
||||
// A = A_r + i A_i
|
||||
A.Clear();
|
||||
if ( A_r.Type() == Operator::Hypre_ParCSR ||
|
||||
A_i.Type() == Operator::Hypre_ParCSR )
|
||||
if ((!A_r.Ptr() || A_r.Type() == Operator::Hypre_ParCSR) &&
|
||||
(!A_i.Ptr() || A_i.Type() == Operator::Hypre_ParCSR))
|
||||
{
|
||||
ComplexHypreParMatrix * A_hyp =
|
||||
new ComplexHypreParMatrix(A_r.As<HypreParMatrix>(),
|
||||
@@ -1682,8 +2102,8 @@ ParSesquilinearForm::FormSystemMatrix(const Array<int> &ess_tdof_list,
|
||||
|
||||
// A = A_r + i A_i
|
||||
A.Clear();
|
||||
if ( A_r.Type() == Operator::Hypre_ParCSR ||
|
||||
A_i.Type() == Operator::Hypre_ParCSR )
|
||||
if ((!A_r.Ptr() || A_r.Type() == Operator::Hypre_ParCSR) &&
|
||||
(!A_i.Ptr() || A_i.Type() == Operator::Hypre_ParCSR))
|
||||
{
|
||||
ComplexHypreParMatrix * A_hyp =
|
||||
new ComplexHypreParMatrix(A_r.As<HypreParMatrix>(),
|
||||
@@ -1741,6 +2161,434 @@ ParSesquilinearForm::Update(FiniteElementSpace *nfes)
|
||||
if ( pblfi ) { pblfi->Update(nfes); }
|
||||
}
|
||||
|
||||
bool
|
||||
ParMixedSesquilinearForm::RealInteg()
|
||||
{
|
||||
int nint = pmblfr->GetDBFI()->Size() + pmblfr->GetBBFI()->Size() +
|
||||
pmblfr->GetFBFI()->Size() + pmblfr->GetBFBFI()->Size() +
|
||||
pmblfr->GetTFBFI()->Size() + pmblfr->GetBTFBFI()->Size();
|
||||
return (nint != 0);
|
||||
}
|
||||
|
||||
bool
|
||||
ParMixedSesquilinearForm::ImagInteg()
|
||||
{
|
||||
int nint = pmblfi->GetDBFI()->Size() + pmblfi->GetBBFI()->Size() +
|
||||
pmblfi->GetFBFI()->Size() + pmblfi->GetBFBFI()->Size() +
|
||||
pmblfi->GetTFBFI()->Size() + pmblfi->GetBTFBFI()->Size();
|
||||
return (nint != 0);
|
||||
}
|
||||
|
||||
ParMixedSesquilinearForm::ParMixedSesquilinearForm(ParFiniteElementSpace *
|
||||
trial_fes,
|
||||
ParFiniteElementSpace * test_fes,
|
||||
ComplexOperator::Convention convention)
|
||||
: conv(convention),
|
||||
pmblfr(new ParMixedBilinearForm(trial_fes, test_fes)),
|
||||
pmblfi(new ParMixedBilinearForm(trial_fes, test_fes))
|
||||
{
|
||||
}
|
||||
|
||||
ParMixedSesquilinearForm::ParMixedSesquilinearForm(ParFiniteElementSpace *
|
||||
trial_fes,
|
||||
ParFiniteElementSpace * test_fes,
|
||||
ParMixedBilinearForm * pbfr,
|
||||
ParMixedBilinearForm * pbfi,
|
||||
ComplexOperator::Convention convention)
|
||||
: conv(convention),
|
||||
pmblfr(new ParMixedBilinearForm(trial_fes, test_fes, pbfr)),
|
||||
pmblfi(new ParMixedBilinearForm(trial_fes, test_fes, pbfi))
|
||||
{
|
||||
}
|
||||
|
||||
ParMixedSesquilinearForm::~ParMixedSesquilinearForm()
|
||||
{
|
||||
delete pmblfr;
|
||||
delete pmblfi;
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
pmblfr->AddDomainIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
pmblfi->AddDomainIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & elem_marker)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
pmblfr->AddDomainIntegrator(bfi_real, elem_marker);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
pmblfi->AddDomainIntegrator(bfi_imag, elem_marker);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::AddBoundaryIntegrator(BilinearFormIntegrator *
|
||||
bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
pmblfr->AddBoundaryIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
pmblfi->AddBoundaryIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::AddBoundaryIntegrator(BilinearFormIntegrator *
|
||||
bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
pmblfr->AddBoundaryIntegrator(bfi_real, bdr_marker);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
pmblfi->AddBoundaryIntegrator(bfi_imag, bdr_marker);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::AddInteriorFaceIntegrator(BilinearFormIntegrator *
|
||||
bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
pmblfr->AddInteriorFaceIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
pmblfi->AddInteriorFaceIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::AddBdrFaceIntegrator(BilinearFormIntegrator *
|
||||
bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
pmblfr->AddBdrFaceIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
pmblfi->AddBdrFaceIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::AddBdrFaceIntegrator(BilinearFormIntegrator *
|
||||
bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
pmblfr->AddBdrFaceIntegrator(bfi_real, bdr_marker);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
pmblfi->AddBdrFaceIntegrator(bfi_imag, bdr_marker);
|
||||
}
|
||||
}
|
||||
|
||||
void ParMixedSesquilinearForm::AddTraceFaceIntegrator(BilinearFormIntegrator *
|
||||
bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
pmblfr->AddTraceFaceIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
pmblfi->AddTraceFaceIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void ParMixedSesquilinearForm::AddBdrTraceFaceIntegrator(
|
||||
BilinearFormIntegrator *bfi_real,
|
||||
BilinearFormIntegrator *bfi_imag)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
pmblfr->AddBdrTraceFaceIntegrator(bfi_real);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
pmblfi->AddBdrTraceFaceIntegrator(bfi_imag);
|
||||
}
|
||||
}
|
||||
|
||||
void ParMixedSesquilinearForm::AddBdrTraceFaceIntegrator(
|
||||
BilinearFormIntegrator *bfi_real,
|
||||
BilinearFormIntegrator *bfi_imag,
|
||||
Array<int> &bdr_marker)
|
||||
{
|
||||
if (bfi_real)
|
||||
{
|
||||
pmblfr->AddBdrTraceFaceIntegrator(bfi_real, bdr_marker);
|
||||
}
|
||||
if (bfi_imag)
|
||||
{
|
||||
pmblfi->AddBdrTraceFaceIntegrator(bfi_imag, bdr_marker);
|
||||
}
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::Assemble(int skip_zeros)
|
||||
{
|
||||
pmblfr->Assemble(skip_zeros);
|
||||
pmblfi->Assemble(skip_zeros);
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::Finalize(int skip_zeros)
|
||||
{
|
||||
pmblfr->Finalize(skip_zeros);
|
||||
pmblfi->Finalize(skip_zeros);
|
||||
}
|
||||
|
||||
ComplexHypreParMatrix *
|
||||
ParMixedSesquilinearForm::ParallelAssemble()
|
||||
{
|
||||
return new ComplexHypreParMatrix(
|
||||
pmblfr->ParallelAssemble(), pmblfi->ParallelAssemble(), true, true, conv);
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::FormRectangularLinearSystem(const Array<int> &
|
||||
ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
Vector & x,
|
||||
Vector & b,
|
||||
OperatorHandle & A,
|
||||
Vector & X,
|
||||
Vector & B)
|
||||
{
|
||||
FiniteElementSpace * pfes_trial = pmblfr->TrialFESpace();
|
||||
FiniteElementSpace * pfes_test = pmblfr->TestFESpace();
|
||||
const int vsize_trial = pfes_trial->GetVSize();
|
||||
const int vsize_test = pfes_test->GetVSize();
|
||||
|
||||
// Allocate temporary Vector
|
||||
Vector b_0;
|
||||
b_0.UseDevice(true);
|
||||
b_0.SetSize(vsize_test);
|
||||
b_0 = 0.0;
|
||||
|
||||
// Extract the real and imaginary parts of the input Vectors
|
||||
MFEM_ASSERT(x.Size() == 2 * vsize_trial,
|
||||
"Input GridFunction of incorrect size!");
|
||||
x.Read();
|
||||
Vector x_r;
|
||||
x_r.MakeRef(x, 0, vsize_trial);
|
||||
Vector x_i;
|
||||
x_i.MakeRef(x, vsize_trial, vsize_trial);
|
||||
|
||||
MFEM_ASSERT(b.Size() == 2 * vsize_test, "Input LinearForm of incorrect size!");
|
||||
b.Read();
|
||||
Vector b_r;
|
||||
b_r.MakeRef(b, 0, vsize_test);
|
||||
Vector b_i;
|
||||
b_i.MakeRef(b, vsize_test, vsize_test);
|
||||
|
||||
if (conv == ComplexOperator::BLOCK_SYMMETRIC)
|
||||
{
|
||||
b_i *= -1.0;
|
||||
}
|
||||
|
||||
const int tvsize_trial = pfes_trial->GetTrueVSize();
|
||||
const int tvsize_test = pfes_test->GetTrueVSize();
|
||||
OperatorHandle A_r, A_i;
|
||||
|
||||
X.UseDevice(true);
|
||||
X.SetSize(2 * tvsize_trial);
|
||||
X = 0.0;
|
||||
|
||||
B.UseDevice(true);
|
||||
B.SetSize(2 * tvsize_test);
|
||||
B = 0.0;
|
||||
|
||||
Vector X_r;
|
||||
X_r.MakeRef(X, 0, tvsize_trial);
|
||||
Vector X_i;
|
||||
X_i.MakeRef(X, tvsize_trial, tvsize_trial);
|
||||
Vector B_r;
|
||||
B_r.MakeRef(B, 0, tvsize_test);
|
||||
Vector B_i;
|
||||
B_i.MakeRef(B, tvsize_test, tvsize_test);
|
||||
|
||||
Vector X_0, B_0;
|
||||
|
||||
if (RealInteg())
|
||||
{
|
||||
b_0 = b_r;
|
||||
pmblfr->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_r, b_0, A_r, X_0, B_0);
|
||||
X_r = X_0;
|
||||
B_r = B_0;
|
||||
|
||||
b_0 = b_i;
|
||||
pmblfr->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_i, b_0, A_r, X_0, B_0);
|
||||
X_i = X_0;
|
||||
B_i = B_0;
|
||||
|
||||
if (ImagInteg())
|
||||
{
|
||||
b_0 = 0.0;
|
||||
pmblfi->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_i, b_0, A_i, X_0, B_0);
|
||||
B_r -= B_0;
|
||||
|
||||
b_0 = 0.0;
|
||||
pmblfi->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_r, b_0, A_i, X_0, B_0);
|
||||
B_i += B_0;
|
||||
}
|
||||
}
|
||||
else if (ImagInteg())
|
||||
{
|
||||
b_0 = b_i;
|
||||
pmblfi->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_r, b_0, A_i, X_0, B_0);
|
||||
X_r = X_0;
|
||||
B_i = B_0;
|
||||
|
||||
b_0 = b_r;
|
||||
b_0 *= -1.0;
|
||||
pmblfi->FormRectangularLinearSystem(
|
||||
ess_trial_tdof_list, ess_test_tdof_list, x_i, b_0, A_i, X_0, B_0);
|
||||
X_i = X_0;
|
||||
B_r = B_0;
|
||||
B_r *= -1.0;
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Real and Imaginary part of the Mixed Sesquilinear form are empty");
|
||||
}
|
||||
|
||||
if (conv == ComplexOperator::BLOCK_SYMMETRIC)
|
||||
{
|
||||
B_i *= -1.0;
|
||||
b_i *= -1.0;
|
||||
}
|
||||
|
||||
x_r.SyncAliasMemory(x);
|
||||
x_i.SyncAliasMemory(x);
|
||||
b_r.SyncAliasMemory(b);
|
||||
b_i.SyncAliasMemory(b);
|
||||
|
||||
X_r.SyncAliasMemory(X);
|
||||
X_i.SyncAliasMemory(X);
|
||||
B_r.SyncAliasMemory(B);
|
||||
B_i.SyncAliasMemory(B);
|
||||
|
||||
// A = A_r + i A_i
|
||||
A.Clear();
|
||||
if ((!A_r.Ptr() || A_r.Type() == Operator::Hypre_ParCSR) &&
|
||||
(!A_i.Ptr() || A_i.Type() == Operator::Hypre_ParCSR))
|
||||
{
|
||||
ComplexHypreParMatrix * A_hyp =
|
||||
new ComplexHypreParMatrix(A_r.As<HypreParMatrix>(),
|
||||
A_i.As<HypreParMatrix>(),
|
||||
A_r.OwnsOperator(),
|
||||
A_i.OwnsOperator(),
|
||||
conv);
|
||||
A.Reset<ComplexHypreParMatrix>(A_hyp, true);
|
||||
}
|
||||
else
|
||||
{
|
||||
ComplexOperator * A_op = new ComplexOperator(A_r.As<Operator>(),
|
||||
A_i.As<Operator>(),
|
||||
A_r.OwnsOperator(),
|
||||
A_i.OwnsOperator(),
|
||||
conv);
|
||||
A.Reset<ComplexOperator>(A_op, true);
|
||||
}
|
||||
A_r.SetOperatorOwner(false);
|
||||
A_i.SetOperatorOwner(false);
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::FormRectangularSystemMatrix(const Array<int> &
|
||||
ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
OperatorHandle & A)
|
||||
{
|
||||
OperatorHandle A_r, A_i;
|
||||
if (RealInteg())
|
||||
{
|
||||
pmblfr->FormRectangularSystemMatrix(ess_trial_tdof_list, ess_test_tdof_list,
|
||||
A_r);
|
||||
}
|
||||
if (ImagInteg())
|
||||
{
|
||||
pmblfi->FormRectangularSystemMatrix(ess_trial_tdof_list, ess_test_tdof_list,
|
||||
A_i);
|
||||
}
|
||||
if (!RealInteg() && !ImagInteg())
|
||||
{
|
||||
MFEM_ABORT("Both Real and Imaginary part of the Mixed Sesquilinear form are empty");
|
||||
}
|
||||
|
||||
// A = A_r + i A_i
|
||||
A.Clear();
|
||||
if ((!A_r.Ptr() || A_r.Type() == Operator::Hypre_ParCSR) &&
|
||||
(!A_i.Ptr() || A_i.Type() == Operator::Hypre_ParCSR))
|
||||
{
|
||||
ComplexHypreParMatrix * A_hyp =
|
||||
new ComplexHypreParMatrix(A_r.As<HypreParMatrix>(),
|
||||
A_i.As<HypreParMatrix>(),
|
||||
A_r.OwnsOperator(),
|
||||
A_i.OwnsOperator(),
|
||||
conv);
|
||||
A.Reset<ComplexHypreParMatrix>(A_hyp, true);
|
||||
}
|
||||
else
|
||||
{
|
||||
ComplexOperator * A_op = new ComplexOperator(A_r.As<Operator>(),
|
||||
A_i.As<Operator>(),
|
||||
A_r.OwnsOperator(),
|
||||
A_i.OwnsOperator(),
|
||||
conv);
|
||||
A.Reset<ComplexOperator>(A_op, true);
|
||||
}
|
||||
A_r.SetOperatorOwner(false);
|
||||
A_i.SetOperatorOwner(false);
|
||||
}
|
||||
|
||||
void
|
||||
ParMixedSesquilinearForm::Update()
|
||||
{
|
||||
pmblfr->Update();
|
||||
pmblfi->Update();
|
||||
}
|
||||
|
||||
|
||||
|
||||
#endif // MFEM_USE_MPI
|
||||
|
||||
}
|
||||
|
||||
@@ -505,6 +505,186 @@ public:
|
||||
virtual ~SesquilinearForm();
|
||||
};
|
||||
|
||||
/** Class for a mixed sesquilinear form
|
||||
|
||||
A mixed sesquilinear form is a generalization of a mixed bilinear form to
|
||||
complex-valued fields. Mixed sesquilinear forms are linear in the second
|
||||
argument but the first argument involves a complex conjugate in the sense
|
||||
that:
|
||||
|
||||
a(alpha u, beta v) = conj(alpha) beta a(u, v)
|
||||
|
||||
The @a convention argument in the class's constructor is documented in the
|
||||
mfem::ComplexOperator class found in linalg/complex_operator.hpp.
|
||||
|
||||
When supplying integrators to the MixedSesquilinearForm either the real or
|
||||
imaginary integrator can be NULL. This indicates that the corresponding
|
||||
portion of the complex-valued material coefficient is equal to zero.
|
||||
*/
|
||||
class MixedSesquilinearForm
|
||||
{
|
||||
private:
|
||||
ComplexOperator::Convention conv;
|
||||
|
||||
MixedBilinearForm * mblfr;
|
||||
MixedBilinearForm * mblfi;
|
||||
|
||||
/* These methods check if the real/imag parts of the sesqulinear form are not
|
||||
empty */
|
||||
bool RealInteg();
|
||||
bool ImagInteg();
|
||||
|
||||
public:
|
||||
MixedSesquilinearForm(
|
||||
FiniteElementSpace * trial_fes,
|
||||
FiniteElementSpace * test_fes,
|
||||
ComplexOperator::Convention convention = ComplexOperator::HERMITIAN);
|
||||
|
||||
/** @brief Create a MixedSesquilinearForm on the given trial and test
|
||||
FiniteElementSpaces, using the same integrators as the
|
||||
MixedBilinearForms @a bfr and @a bfi.
|
||||
|
||||
The FiniteElementSpace pointers are not owned by the newly constructed
|
||||
object.
|
||||
|
||||
The integrators are copied as pointers and they are not owned by the
|
||||
newly constructed MixedSesquilinearForm. */
|
||||
MixedSesquilinearForm(
|
||||
FiniteElementSpace * trial_fes,
|
||||
FiniteElementSpace * test_fes,
|
||||
MixedBilinearForm * bfr,
|
||||
MixedBilinearForm * bfi,
|
||||
ComplexOperator::Convention convention = ComplexOperator::HERMITIAN);
|
||||
|
||||
ComplexOperator::Convention GetConvention() const { return conv; }
|
||||
void SetConvention(const ComplexOperator::Convention & convention) { conv = convention; }
|
||||
|
||||
/// Set the desired assembly level.
|
||||
/** Valid choices are:
|
||||
|
||||
- AssemblyLevel::LEGACY (default)
|
||||
- AssemblyLevel::FULL
|
||||
- AssemblyLevel::PARTIAL
|
||||
- AssemblyLevel::ELEMENT
|
||||
- AssemblyLevel::NONE
|
||||
|
||||
This method must be called before assembly. */
|
||||
void SetAssemblyLevel(AssemblyLevel assembly_level)
|
||||
{
|
||||
mblfr->SetAssemblyLevel(assembly_level);
|
||||
mblfi->SetAssemblyLevel(assembly_level);
|
||||
}
|
||||
|
||||
MixedBilinearForm & real() { return *mblfr; }
|
||||
MixedBilinearForm & imag() { return *mblfi; }
|
||||
const MixedBilinearForm & real() const { return *mblfr; }
|
||||
const MixedBilinearForm & imag() const { return *mblfi; }
|
||||
|
||||
/// Adds new Domain Integrator.
|
||||
void AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds new Domain Integrator, restricted to specific attributes.
|
||||
void AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & elem_marker);
|
||||
|
||||
/// Adds new Boundary Integrator.
|
||||
void AddBoundaryIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/** @brief Adds new boundary Integrator, restricted to specific boundary
|
||||
attributes.
|
||||
|
||||
Assumes ownership of @a bfi.
|
||||
|
||||
The mfem::array @a bdr_marker is stored internally as a pointer to the given
|
||||
mfem::Array<int> object. */
|
||||
void AddBoundaryIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker);
|
||||
|
||||
/// Adds new interior Face Integrator. Assumes ownership of @a bfi.
|
||||
void AddInteriorFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds new boundary Face Integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/** @brief Adds new boundary Face Integrator, restricted to specific boundary
|
||||
attributes.
|
||||
|
||||
Assumes ownership of @a bfi.
|
||||
|
||||
The mfem::array @a bdr_marker is stored internally as a pointer to the given
|
||||
mfem::Array<int> object. */
|
||||
void AddBdrFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker);
|
||||
|
||||
/** @brief Add a trace face integrator. Assumes ownership of @a bfi.
|
||||
|
||||
This type of integrator assembles terms over all faces of the mesh using
|
||||
the face FE from the trial space and the two adjacent volume FEs from
|
||||
the test space. */
|
||||
void AddTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds a boundary trace face integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds a boundary trace face integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> &bdr_marker);
|
||||
|
||||
/// Assemble the local matrix
|
||||
void Assemble(int skip_zeros = 1);
|
||||
|
||||
/// Finalizes the matrix initialization.
|
||||
void Finalize(int skip_zeros = 1);
|
||||
|
||||
/// Updates the internal mixed forms with the new finite element space.
|
||||
virtual void Update();
|
||||
|
||||
/** @brief Return a ComplexSparseMatrix wrapping the local (L-dof) real
|
||||
and imaginary matrices of the form.
|
||||
|
||||
The returned wrapper has to be deleted by the caller, but it does not
|
||||
own the wrapped real and imaginary matrices, which remain owned by
|
||||
this form. */
|
||||
ComplexSparseMatrix *AssembleComplexSparseMatrix();
|
||||
|
||||
/// Return the trial FE space associated with the MixedSesquilinearForm.
|
||||
FiniteElementSpace *TrialFESpace() { return mblfr->TrialFESpace(); }
|
||||
|
||||
/// Read-only access to the associated trial FiniteElementSpace.
|
||||
const FiniteElementSpace *TrialFESpace() const { return mblfr->TrialFESpace(); }
|
||||
|
||||
/// Return the test FE space associated with the MixedSesquilinearForm.
|
||||
FiniteElementSpace *TestFESpace() { return mblfr->TestFESpace(); }
|
||||
|
||||
/// Read-only access to the associated test FiniteElementSpace.
|
||||
const FiniteElementSpace *TestFESpace() const { return mblfr->TestFESpace(); }
|
||||
|
||||
|
||||
void FormRectangularLinearSystem(const Array<int> & ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
Vector & x,
|
||||
Vector & b,
|
||||
OperatorHandle & A,
|
||||
Vector & X,
|
||||
Vector & B);
|
||||
|
||||
void FormRectangularSystemMatrix(const Array<int> & ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
OperatorHandle & A);
|
||||
|
||||
virtual ~MixedSesquilinearForm();
|
||||
};
|
||||
|
||||
#ifdef MFEM_USE_MPI
|
||||
|
||||
/// Class for parallel complex-valued grid function - real + imaginary part
|
||||
@@ -921,6 +1101,169 @@ public:
|
||||
virtual ~ParSesquilinearForm();
|
||||
};
|
||||
|
||||
/** Class for a parallel mixed sesquilinear form
|
||||
|
||||
A mixed sesquilinear form is a generalization of a mixed bilinear form to
|
||||
complex-valued fields. Mixed sesquilinear forms are linear in the second
|
||||
argument but the first argument involves a complex conjugate in the sense
|
||||
that:
|
||||
|
||||
a(alpha u, beta v) = conj(alpha) beta a(u, v)
|
||||
|
||||
The @a convention argument in the class's constructor is documented in the
|
||||
mfem::ComplexOperator class found in linalg/complex_operator.hpp.
|
||||
|
||||
When supplying integrators to the ParMixedSesquilinearForm either the real
|
||||
or imaginary integrator can be NULL. This indicates that the corresponding
|
||||
portion of the complex-valued material coefficient is equal to zero.
|
||||
*/
|
||||
class ParMixedSesquilinearForm
|
||||
{
|
||||
private:
|
||||
ComplexOperator::Convention conv;
|
||||
|
||||
ParMixedBilinearForm * pmblfr;
|
||||
ParMixedBilinearForm * pmblfi;
|
||||
|
||||
/* These methods check if the real/imag parts of the sesqulinear form are
|
||||
not empty */
|
||||
bool RealInteg();
|
||||
bool ImagInteg();
|
||||
|
||||
public:
|
||||
ParMixedSesquilinearForm(
|
||||
ParFiniteElementSpace * trial_fes,
|
||||
ParFiniteElementSpace * test_fes,
|
||||
ComplexOperator::Convention convention = ComplexOperator::HERMITIAN);
|
||||
|
||||
/** @brief Create a ParMixedSesquilinearForm on the given trial and test
|
||||
ParFiniteElementSpaces, using the same integrators as the
|
||||
ParMixedBilinearForms @a pbfr and @a pbfi.
|
||||
|
||||
The ParFiniteElementSpace pointers are not owned by the newly
|
||||
constructed object.
|
||||
|
||||
The integrators are copied as pointers and they are not owned by the
|
||||
newly constructed ParMixedSesquilinearForm. */
|
||||
ParMixedSesquilinearForm(
|
||||
ParFiniteElementSpace * trial_fes,
|
||||
ParFiniteElementSpace * test_fes,
|
||||
ParMixedBilinearForm * pbfr,
|
||||
ParMixedBilinearForm * pbfi,
|
||||
ComplexOperator::Convention convention = ComplexOperator::HERMITIAN);
|
||||
|
||||
ComplexOperator::Convention GetConvention() const { return conv; }
|
||||
void SetConvention(const ComplexOperator::Convention & convention) { conv = convention; }
|
||||
|
||||
/// Set the desired assembly level.
|
||||
/** Valid choices are:
|
||||
|
||||
- AssemblyLevel::LEGACY (default)
|
||||
- AssemblyLevel::FULL
|
||||
- AssemblyLevel::PARTIAL
|
||||
- AssemblyLevel::ELEMENT
|
||||
- AssemblyLevel::NONE
|
||||
|
||||
This method must be called before assembly. */
|
||||
void SetAssemblyLevel(AssemblyLevel assembly_level)
|
||||
{
|
||||
pmblfr->SetAssemblyLevel(assembly_level);
|
||||
pmblfi->SetAssemblyLevel(assembly_level);
|
||||
}
|
||||
|
||||
ParMixedBilinearForm & real() { return *pmblfr; }
|
||||
ParMixedBilinearForm & imag() { return *pmblfi; }
|
||||
const ParMixedBilinearForm & real() const { return *pmblfr; }
|
||||
const ParMixedBilinearForm & imag() const { return *pmblfi; }
|
||||
|
||||
/// Adds new Domain Integrator.
|
||||
void AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds new Domain Integrator, restricted to specific attributes.
|
||||
void AddDomainIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & elem_marker);
|
||||
|
||||
/// Adds new Boundary Integrator.
|
||||
void AddBoundaryIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/** @brief Adds new boundary Integrator, restricted to specific boundary
|
||||
attributes.
|
||||
|
||||
Assumes ownership of @a bfi.
|
||||
|
||||
The mfem::array @a bdr_marker is stored internally as a pointer to the given
|
||||
mfem::Array<int> object. */
|
||||
void AddBoundaryIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker);
|
||||
|
||||
/// Adds new interior Face Integrator. Assumes ownership of @a bfi.
|
||||
void AddInteriorFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds new boundary Face Integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/** @brief Adds new boundary Face Integrator, restricted to specific boundary
|
||||
attributes.
|
||||
|
||||
Assumes ownership of @a bfi.
|
||||
|
||||
The mfem::array @a bdr_marker is stored internally as a pointer to the given
|
||||
mfem::Array<int> object. */
|
||||
void AddBdrFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> & bdr_marker);
|
||||
|
||||
/** @brief Add a trace face integrator. Assumes ownership of @a bfi.
|
||||
|
||||
This type of integrator assembles terms over all faces of the mesh using
|
||||
the face FE from the trial space and the two adjacent volume FEs from
|
||||
the test space. */
|
||||
void AddTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds a boundary trace face integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag);
|
||||
|
||||
/// Adds a boundary trace face integrator. Assumes ownership of @a bfi.
|
||||
void AddBdrTraceFaceIntegrator(BilinearFormIntegrator * bfi_real,
|
||||
BilinearFormIntegrator * bfi_imag,
|
||||
Array<int> &bdr_marker);
|
||||
|
||||
/// Assemble the local matrix
|
||||
void Assemble(int skip_zeros = 1);
|
||||
|
||||
/// Finalizes the matrix initialization.
|
||||
void Finalize(int skip_zeros = 1);
|
||||
|
||||
/// Updates the internal mixed forms with the new finite element space.
|
||||
virtual void Update();
|
||||
|
||||
/// Returns the matrix assembled on the true dofs, i.e. P^t A P.
|
||||
/** The returned matrix has to be deleted by the caller. */
|
||||
ComplexHypreParMatrix * ParallelAssemble();
|
||||
|
||||
void FormRectangularLinearSystem(const Array<int> & ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
Vector & x,
|
||||
Vector & b,
|
||||
OperatorHandle & A,
|
||||
Vector & X,
|
||||
Vector & B);
|
||||
|
||||
void FormRectangularSystemMatrix(const Array<int> & ess_trial_tdof_list,
|
||||
const Array<int> & ess_test_tdof_list,
|
||||
OperatorHandle & A);
|
||||
|
||||
virtual ~ParMixedSesquilinearForm();
|
||||
};
|
||||
|
||||
#endif // MFEM_USE_MPI
|
||||
|
||||
}
|
||||
|
||||
@@ -809,7 +809,7 @@ ParaViewDataCollectionBase::ParaViewDataCollectionBase(
|
||||
|
||||
void ParaViewDataCollectionBase::SetLevelsOfDetail(int levels_of_detail_)
|
||||
{
|
||||
levels_of_detail = levels_of_detail_;
|
||||
levels_of_detail = std::max(levels_of_detail_, 1);
|
||||
}
|
||||
|
||||
void ParaViewDataCollectionBase::SetHighOrderOutput(bool high_order_output_)
|
||||
|
||||
+30
-79
@@ -25,35 +25,21 @@
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// Lightweight adaptor over an std::map from type K to type to V
|
||||
template<typename K, typename V,
|
||||
typename = typename std::enable_if<std::is_default_constructible<V>::value>::type>
|
||||
class GenericFieldMap
|
||||
/// Lightweight adaptor over an std::map from strings to pointer to T
|
||||
template<typename T>
|
||||
class NamedFieldsMap
|
||||
{
|
||||
private:
|
||||
static constexpr bool ValueIsPointer = std::is_pointer<V>::value;
|
||||
|
||||
public:
|
||||
typedef std::map<K, V> MapType;
|
||||
typedef std::map<std::string, T*> MapType;
|
||||
typedef typename MapType::iterator iterator;
|
||||
typedef typename MapType::const_iterator const_iterator;
|
||||
|
||||
/// Register field @a field with name @a key
|
||||
/// Only enabled if the template parameter V is not a pointer
|
||||
template<typename = std::enable_if<!ValueIsPointer, bool>>
|
||||
void Register(const K& key, V field)
|
||||
/// Register field @a field with name @a fname
|
||||
/** Replace existing field associated with @a fname (and optionally
|
||||
delete associated pointer if @a own_data is true) */
|
||||
void Register(const std::string& fname, T* field, bool own_data)
|
||||
{
|
||||
field_map[key] = field;
|
||||
}
|
||||
|
||||
/// Register field @a field with name @a key
|
||||
/** Replace existing field associated with @a key (and optionally
|
||||
delete associated pointer if @a own_data is true).
|
||||
Only enabled if the template parameter V is a pointer*/
|
||||
template<typename = std::enable_if<ValueIsPointer, bool>>
|
||||
void Register(const K& key, V field, bool own_data)
|
||||
{
|
||||
V& ref = field_map[key];
|
||||
T*& ref = field_map[fname];
|
||||
if (own_data)
|
||||
{
|
||||
delete ref; // if newly allocated -> ref is null -> OK
|
||||
@@ -61,40 +47,23 @@ public:
|
||||
ref = field;
|
||||
}
|
||||
|
||||
/// Unregister association between field @a field and name @a key
|
||||
/// Only enabled if the template parameter V is not a pointer
|
||||
template<typename = std::enable_if<!ValueIsPointer, bool>>
|
||||
void Deregister(const K& key)
|
||||
/// Unregister association between field @a field and name @a fname
|
||||
/** Optionally delete associated pointer if @a own_data is true */
|
||||
void Deregister(const std::string& fname, bool own_data)
|
||||
{
|
||||
iterator it = field_map.find(key);
|
||||
if ( it != field_map.end() )
|
||||
{
|
||||
field_map.erase(it);
|
||||
}
|
||||
}
|
||||
|
||||
/// Unregister association between field @a field and name @a key
|
||||
/** Optionally delete associated pointer if @a own_data is true.
|
||||
Only enabled if the template parameter V is a pointer */
|
||||
template<typename = std::enable_if<ValueIsPointer, bool>>
|
||||
void Deregister(const K& key, bool own_data)
|
||||
{
|
||||
iterator it = field_map.find(key);
|
||||
iterator it = field_map.find(fname);
|
||||
if ( it != field_map.end() )
|
||||
{
|
||||
if (own_data)
|
||||
{
|
||||
delete it->second;
|
||||
it->second = nullptr;
|
||||
}
|
||||
field_map.erase(it);
|
||||
}
|
||||
}
|
||||
|
||||
/// Clear all associations between names and fields
|
||||
/** Delete associated pointers when @a own_data is true.
|
||||
Only enabled if the template parameter V is a pointer */
|
||||
template<typename = std::enable_if<ValueIsPointer, bool>>
|
||||
/** Delete associated pointers when @a own_data is true */
|
||||
void DeleteData(bool own_data)
|
||||
{
|
||||
for (iterator it = field_map.begin(); it != field_map.end(); ++it)
|
||||
@@ -107,37 +76,22 @@ public:
|
||||
}
|
||||
}
|
||||
|
||||
/// Predicate to check if a field is associated with name @a key
|
||||
bool Has(const K& key) const
|
||||
/// Predicate to check if a field is associated with name @a fname
|
||||
bool Has(const std::string& fname) const
|
||||
{
|
||||
return field_map.find(key) != field_map.end();
|
||||
return field_map.find(fname) != field_map.end();
|
||||
}
|
||||
|
||||
/// Get a pointer to the field associated with name @a key
|
||||
/** @return Field associated with @a key or NULL,
|
||||
if value is pointer and key not found */
|
||||
V Get(const K& key) const
|
||||
/// Get a pointer to the field associated with name @a fname
|
||||
/** @return Pointer to field associated with @a fname or NULL */
|
||||
T* Get(const std::string& fname) const
|
||||
{
|
||||
const_iterator it = field_map.find(key);
|
||||
if (it != field_map.end())
|
||||
{
|
||||
return it->second;
|
||||
}
|
||||
else
|
||||
{
|
||||
if constexpr (ValueIsPointer)
|
||||
{
|
||||
return nullptr;
|
||||
}
|
||||
else
|
||||
{
|
||||
return V(); // Return default-constructed value for non-pointer types
|
||||
}
|
||||
}
|
||||
const_iterator it = field_map.find(fname);
|
||||
return it != field_map.end() ? it->second : NULL;
|
||||
}
|
||||
|
||||
/// Returns a const reference to the underlying map
|
||||
const MapType &GetMap() const { return field_map; }
|
||||
const MapType& GetMap() const { return field_map; }
|
||||
|
||||
/// Returns the number of registered fields
|
||||
int NumFields() const { return field_map.size(); }
|
||||
@@ -152,24 +106,21 @@ public:
|
||||
/// Returns an end const iterator to the registered fields
|
||||
const_iterator end() const { return field_map.end(); }
|
||||
|
||||
/// Returns an iterator to the field @a key
|
||||
iterator find(const K& key)
|
||||
{ return field_map.find(key); }
|
||||
/// Returns an iterator to the field @a fname
|
||||
iterator find(const std::string& fname)
|
||||
{ return field_map.find(fname); }
|
||||
|
||||
/// Returns a const iterator to the field @a key
|
||||
const_iterator find(const K& key) const
|
||||
{ return field_map.find(key); }
|
||||
/// Returns a const iterator to the field @a fname
|
||||
const_iterator find(const std::string& fname) const
|
||||
{ return field_map.find(fname); }
|
||||
|
||||
/// Clears the map of registered fields
|
||||
/// Clears the map of registered fields without reclaiming memory
|
||||
void clear() { field_map.clear(); }
|
||||
|
||||
protected:
|
||||
MapType field_map;
|
||||
};
|
||||
|
||||
/// Lightweight adaptor over an std::map from strings to pointer to T
|
||||
template<typename T>
|
||||
using NamedFieldsMap = GenericFieldMap<std::string, T*>;
|
||||
|
||||
/** A class for collecting finite element data that is part of the same
|
||||
simulation. Currently, this class groups together grid functions (fields),
|
||||
|
||||
+2
-16
@@ -671,20 +671,6 @@ public:
|
||||
MPI_COMM_WORLD);
|
||||
}
|
||||
|
||||
Operator& GetGradient(const Vector &x0) const override
|
||||
{
|
||||
x = x0;
|
||||
f.UseDevice(x.UseDevice());
|
||||
xpev.UseDevice(x.UseDevice());
|
||||
|
||||
op.Mult(x, f);
|
||||
const real_t xnorm_local = x.Norml2();
|
||||
MPI_Allreduce(&xnorm_local, &xnorm, 1, MPITypeMap<real_t>::mpi_type, MPI_SUM,
|
||||
MPI_COMM_WORLD);
|
||||
|
||||
return const_cast<FDJacobian&>(*this);
|
||||
}
|
||||
|
||||
void Mult(const Vector &v, Vector &y) const override
|
||||
{
|
||||
// See [1] for choice of eps.
|
||||
@@ -739,11 +725,11 @@ public:
|
||||
|
||||
private:
|
||||
const Operator &op;
|
||||
mutable Vector x, f;
|
||||
Vector x, f;
|
||||
mutable Vector xpev;
|
||||
real_t lambda = 1.0e-6;
|
||||
real_t fixed_eps;
|
||||
mutable real_t xnorm;
|
||||
real_t xnorm;
|
||||
};
|
||||
|
||||
/// @brief Find the index of a field descriptor in a vector of field descriptors.
|
||||
|
||||
@@ -307,12 +307,12 @@ public:
|
||||
|
||||
/** @brief virtual function which evaluates the values of all
|
||||
shape functions at a given point ip and stores
|
||||
them in the vector shape of dimension Dof (4) */
|
||||
them in the vector shape of dimension Dof (6) */
|
||||
void CalcShape(const IntegrationPoint &ip, Vector &shape) const override;
|
||||
|
||||
/** @brief virtual function which evaluates the values of all
|
||||
partial derivatives of all shape functions at a given
|
||||
point ip and stores them in the matrix dshape (Dof x Dim) (4 x 3)
|
||||
point ip and stores them in the matrix dshape (Dof x Dim) (6 x 3)
|
||||
so that each row contains the derivatives of one shape function */
|
||||
void CalcDShape(const IntegrationPoint &ip,
|
||||
DenseMatrix &dshape) const override;
|
||||
@@ -336,12 +336,12 @@ public:
|
||||
|
||||
/** @brief virtual function which evaluates the values of all
|
||||
shape functions at a given point ip and stores
|
||||
them in the vector shape of dimension Dof (4) */
|
||||
them in the vector shape of dimension Dof (5) */
|
||||
void CalcShape(const IntegrationPoint &ip, Vector &shape) const override;
|
||||
|
||||
/** @brief virtual function which evaluates the values of all
|
||||
partial derivatives of all shape functions at a given
|
||||
point ip and stores them in the matrix dshape (Dof x Dim) (4 x 3)
|
||||
point ip and stores them in the matrix dshape (Dof x Dim) (5 x 3)
|
||||
so that each row contains the derivatives of one shape function */
|
||||
void CalcDShape(const IntegrationPoint &ip,
|
||||
DenseMatrix &dshape) const override;
|
||||
|
||||
+131
-58
@@ -1757,22 +1757,45 @@ H1_BergotPyramidElement::H1_BergotPyramidElement(const int p, const int btype)
|
||||
real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
real_t z = ip.z;
|
||||
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
// Compute the limit of the basis functions as z->1 with x and y on the
|
||||
// line between the center of the base and the apex
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
T(o++, m) = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
T(o++, m) = ((k + 3.) * k + 2.) / 2.;
|
||||
}
|
||||
else
|
||||
{
|
||||
T(o++, m) = 0.;
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
{
|
||||
T(o++, m) = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -1793,25 +1816,44 @@ void H1_BergotPyramidElement::CalcShape(const IntegrationPoint &ip,
|
||||
Vector u(dof);
|
||||
#endif
|
||||
|
||||
real_t x = (ip.z < 1.0) ? (ip.x / (1.0 - ip.z)) : 0.0;
|
||||
real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
real_t z = ip.z;
|
||||
const real_t x = (ip.z < 1.0) ? (ip.x / (1.0 - ip.z)) : 0.0;
|
||||
const real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
const real_t z = ip.z;
|
||||
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0), z, 1.0,
|
||||
shape_z);
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
u[o++] = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
}
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
// Compute the limit of the basis functions as z->1 with x and y on the
|
||||
// line between the center of the base and the apex
|
||||
u = 0.;
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
u(o) = ((k + 3.) * k + 2.) / 2.;
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
u[o++] = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
}
|
||||
}
|
||||
Ti.Mult(u, shape);
|
||||
}
|
||||
|
||||
@@ -1830,37 +1872,68 @@ void H1_BergotPyramidElement::CalcDShape(const IntegrationPoint &ip,
|
||||
Vector dshape_z(order+1);
|
||||
Vector dshape_z_dt(order+1);
|
||||
#endif
|
||||
real_t x = (ip.z < 1.0) ? (ip.x / (1.0 - ip.z)) : 0.0;
|
||||
real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
real_t z = ip.z;
|
||||
const real_t x = (ip.z < 1.0) ? (ip.x / (1.0 - ip.z)) : 0.0;
|
||||
const real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
const real_t z = ip.z;
|
||||
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData(), dshape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData(), dshape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0), z, 1.0,
|
||||
shape_z, dshape_z, dshape_z_dt);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
// Compute the limit of the gradients of the basis functions as
|
||||
// z->1 with x and y on the line between the center of the base and the
|
||||
// apex
|
||||
du = 0.;
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
du(o,0) = dshape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,1) = shape_x(i) * dshape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,2) = shape_x(i) * shape_y(j) * dshape_z(k) *
|
||||
pow(1.0 - ip.z, maxij) +
|
||||
(ip.x * dshape_x(i) * shape_y(j) +
|
||||
ip.y * shape_x(i) * dshape_y(j)) *
|
||||
shape_z(k) * pow(1.0 - ip.z, maxij - 2) -
|
||||
maxij * shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
{
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
du(o,2) = (((k + 6.) * k + 11.) * k + 6.) * k / 6.;
|
||||
}
|
||||
else if (i == 1 && j == 0)
|
||||
{
|
||||
du(o,0) = ((((k + 10.) * k + 35.) * k + 50.) * k + 24.) / 24.;
|
||||
}
|
||||
else if (i == 0 && j == 1)
|
||||
{
|
||||
du(o,1) = ((((k + 10.) * k + 35.) * k + 50.) * k + 24.) / 24.;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData(), dshape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData(), dshape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0,
|
||||
shape_z, dshape_z, dshape_z_dt);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
{
|
||||
du(o,0) = dshape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,1) = shape_x(i) * dshape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,2) = shape_x(i) * shape_y(j) * dshape_z(k) *
|
||||
pow(1.0 - ip.z, maxij) +
|
||||
(ip.x * dshape_x(i) * shape_y(j) +
|
||||
ip.y * shape_x(i) * dshape_y(j)) *
|
||||
shape_z(k) * pow(1.0 - ip.z, maxij - 2) -
|
||||
maxij * shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
(maxij > 0 ? pow(1.0 - ip.z, maxij - 1) : 0.0);
|
||||
}
|
||||
}
|
||||
}
|
||||
Ti.Mult(du, dshape);
|
||||
}
|
||||
|
||||
|
||||
@@ -208,6 +208,8 @@ private:
|
||||
#endif
|
||||
DenseMatrixInverse Ti;
|
||||
|
||||
static constexpr real_t apex_tol = 1e-8;
|
||||
|
||||
public:
|
||||
H1_BergotPyramidElement(const int p,
|
||||
const int btype = BasisType::GaussLobatto);
|
||||
|
||||
+130
-56
@@ -1106,9 +1106,16 @@ L2_BergotPyramidElement::L2_BergotPyramidElement(const int p, const int btype)
|
||||
{
|
||||
const real_t wik = op[i] + op[k] + op[p-i-k];
|
||||
const real_t w = wik * wjk * op[p-k];
|
||||
Nodes.IntPoint(o++).Set3(op[i] * (op[j] + op[p-j-k]) / w,
|
||||
op[j] * (op[j] + op[p-j-k]) / w,
|
||||
op[k] * op[p-k] / w);
|
||||
if (std::abs(w) < apex_tol)
|
||||
{
|
||||
Nodes.IntPoint(o++).Set3(0.,0.,1.);
|
||||
}
|
||||
else
|
||||
{
|
||||
Nodes.IntPoint(o++).Set3(op[i] * (op[j] + op[p-j-k]) / w,
|
||||
op[j] * (op[i] + op[p-i-k]) / w,
|
||||
op[k] * op[p-k] / w);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@@ -1125,22 +1132,45 @@ L2_BergotPyramidElement::L2_BergotPyramidElement(const int p, const int btype)
|
||||
const real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
const real_t z = ip.z;
|
||||
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
// Compute the limit of the basis functions as z->1 with x and y on the
|
||||
// line between the center of the base and the apex
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
T(o++, m) = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
T(o++, m) = ((k + 3.) * k + 2.) / 2.;
|
||||
}
|
||||
else
|
||||
{
|
||||
T(o++, m) = 0.;
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
{
|
||||
T(o++, m) = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -1165,26 +1195,41 @@ void L2_BergotPyramidElement::CalcShape(const IntegrationPoint &ip,
|
||||
const real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
const real_t z = ip.z;
|
||||
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0), z, 1.0,
|
||||
shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
// Compute the limit of the basis functions as z->1 with x and y on the
|
||||
// line between the center of the base and the apex
|
||||
u = 0.;
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
u[o++] = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
u(o) = ((k + 3.) * k + 2.) / 2.;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
poly1d.CalcLegendre(p, x, shape_x.GetData());
|
||||
poly1d.CalcLegendre(p, y, shape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0, shape_z);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++)
|
||||
u[o++] = shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij);
|
||||
}
|
||||
}
|
||||
Ti.Mult(u, shape);
|
||||
}
|
||||
|
||||
@@ -1208,35 +1253,64 @@ void L2_BergotPyramidElement::CalcDShape(const IntegrationPoint &ip,
|
||||
const real_t y = (ip.z < 1.0) ? (ip.y / (1.0 - ip.z)) : 0.0;
|
||||
const real_t z = ip.z;
|
||||
|
||||
Poly_1D::CalcLegendre(p, x, shape_x.GetData(), dshape_x.GetData());
|
||||
Poly_1D::CalcLegendre(p, y, shape_y.GetData(), dshape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
if (std::abs(z - 1.0) < apex_tol)
|
||||
{
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0), z, 1.0,
|
||||
shape_z, dshape_z, dshape_z_dt);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
// Compute the limit of the gradients of the basis functions as
|
||||
// z->1 with x and y on the line between the center of the base and the
|
||||
// apex
|
||||
du = 0.;
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
du(o,0) = dshape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,1) = shape_x(i) * dshape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,2) = shape_x(i) * shape_y(j) * dshape_z(k) *
|
||||
pow(1.0 - ip.z, maxij) +
|
||||
(ip.x * dshape_x(i) * shape_y(j) +
|
||||
ip.y * shape_x(i) * dshape_y(j)) *
|
||||
shape_z(k) * pow(1.0 - ip.z, maxij - 2) -
|
||||
((maxij > 0) ? (maxij * shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1)) : 0.0);
|
||||
int maxij = std::max(i, j);
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
{
|
||||
if (i == 0 && j == 0)
|
||||
{
|
||||
du(o,2) = (((k + 6.) * k + 11.) * k + 6.) * k / 6.;
|
||||
}
|
||||
else if (i == 1 && j == 0)
|
||||
{
|
||||
du(o,0) = ((((k + 10.) * k + 35.) * k + 50.) * k + 24.) / 24.;
|
||||
}
|
||||
else if (i == 0 && j == 1)
|
||||
{
|
||||
du(o,1) = ((((k + 10.) * k + 35.) * k + 50.) * k + 24.) / 24.;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
Poly_1D::CalcLegendre(p, x, shape_x.GetData(), dshape_x.GetData());
|
||||
Poly_1D::CalcLegendre(p, y, shape_y.GetData(), dshape_y.GetData());
|
||||
|
||||
int o = 0;
|
||||
for (int i = 0; i <= p; i++)
|
||||
for (int j = 0; j <= p; j++)
|
||||
{
|
||||
int maxij = std::max(i, j);
|
||||
FuentesPyramid::CalcScaledJacobi(p-maxij, 2.0 * (maxij + 1.0),
|
||||
z, 1.0,
|
||||
shape_z, dshape_z, dshape_z_dt);
|
||||
|
||||
for (int k = 0; k <= p - maxij; k++, o++)
|
||||
{
|
||||
du(o,0) = dshape_x(i) * shape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,1) = shape_x(i) * dshape_y(j) * shape_z(k) *
|
||||
pow(1.0 - ip.z, maxij - 1);
|
||||
du(o,2) = shape_x(i) * shape_y(j) * dshape_z(k) *
|
||||
pow(1.0 - ip.z, maxij) +
|
||||
(ip.x * dshape_x(i) * shape_y(j) +
|
||||
ip.y * shape_x(i) * dshape_y(j)) *
|
||||
shape_z(k) * pow(1.0 - ip.z, maxij - 2) -
|
||||
maxij * shape_x(i) * shape_y(j) * shape_z(k) *
|
||||
(maxij > 0 ? pow(1.0 - ip.z, maxij - 1) : 0.0);
|
||||
}
|
||||
}
|
||||
}
|
||||
Ti.Mult(du, dshape);
|
||||
}
|
||||
|
||||
|
||||
@@ -225,6 +225,8 @@ private:
|
||||
#endif
|
||||
DenseMatrixInverse Ti;
|
||||
|
||||
static constexpr real_t apex_tol = 1e-8;
|
||||
|
||||
public:
|
||||
/// Construct the L2_PyramidElement of order @a p and BasisType @a btype
|
||||
L2_BergotPyramidElement(const int p,
|
||||
|
||||
+38
-1
@@ -1282,12 +1282,49 @@ ND_SegmentElement::ND_SegmentElement(const int p, const int ob_type)
|
||||
}
|
||||
}
|
||||
|
||||
void ND_SegmentElement::CalcShape(const IntegrationPoint &ip,
|
||||
Vector &shape) const
|
||||
{
|
||||
if (obasis1d.IsIntegratedType()) { obasis1d.ScaleIntegrated(false); }
|
||||
obasis1d.Eval(ip.x, shape);
|
||||
}
|
||||
|
||||
void ND_SegmentElement::CalcVShape(const IntegrationPoint &ip,
|
||||
DenseMatrix &shape) const
|
||||
{
|
||||
Vector vshape(shape.Data(), dof);
|
||||
|
||||
obasis1d.Eval(ip.x, vshape);
|
||||
CalcShape(ip, vshape);
|
||||
}
|
||||
|
||||
void ND_SegmentElement::ProjectIntegrated(VectorCoefficient &vc,
|
||||
ElementTransformation &Trans,
|
||||
Vector &dofs) const
|
||||
{
|
||||
MFEM_ASSERT(obasis1d.IsIntegratedType(), "Not integrated type");
|
||||
real_t vk[Geometry::MaxDim];
|
||||
Vector xk(vk, vc.GetVDim());
|
||||
|
||||
const real_t *cp = poly1d.ClosedPoints(dof, BasisType::GaussLobatto);
|
||||
const IntegrationRule &ir = IntRules.Get(Geometry::SEGMENT, dof);
|
||||
IntegrationPoint ip;
|
||||
|
||||
for (int i = 0; i < dof; i++)
|
||||
{
|
||||
const real_t h = cp[i+1] - cp[i];
|
||||
real_t val = 0.0;
|
||||
|
||||
for (int q = 0; q < ir.GetNPoints(); q++)
|
||||
{
|
||||
const IntegrationPoint &ip1d = ir.IntPoint(q);
|
||||
ip.x = cp[i] + h*ip1d.x;
|
||||
Trans.SetIntPoint(&ip);
|
||||
vc.Eval(xk, Trans, ip);
|
||||
val += ip1d.weight*Trans.Jacobian().InnerProduct(tk, vk);
|
||||
}
|
||||
|
||||
dofs(i) = val*h;
|
||||
}
|
||||
}
|
||||
|
||||
const real_t ND_WedgeElement::tk[15] =
|
||||
|
||||
+10
-3
@@ -303,8 +303,7 @@ public:
|
||||
/** @brief Construct the ND_SegmentElement of order @a p and open
|
||||
BasisType @a ob_type */
|
||||
ND_SegmentElement(const int p, const int ob_type = BasisType::GaussLegendre);
|
||||
void CalcShape(const IntegrationPoint &ip, Vector &shape) const override
|
||||
{ obasis1d.Eval(ip.x, shape); }
|
||||
void CalcShape(const IntegrationPoint &ip, Vector &shape) const override;
|
||||
void CalcVShape(const IntegrationPoint &ip,
|
||||
DenseMatrix &shape) const override;
|
||||
void CalcVShape(ElementTransformation &Trans,
|
||||
@@ -325,7 +324,10 @@ public:
|
||||
using FiniteElement::Project;
|
||||
void Project(VectorCoefficient &vc,
|
||||
ElementTransformation &Trans, Vector &dofs) const override
|
||||
{ Project_ND(tk, dof2tk, vc, Trans, dofs); }
|
||||
{
|
||||
if (obasis1d.IsIntegratedType()) { ProjectIntegrated(vc, Trans, dofs); }
|
||||
else { Project_ND(tk, dof2tk, vc, Trans, dofs); }
|
||||
}
|
||||
void ProjectMatrixCoefficient(MatrixCoefficient &mc,
|
||||
ElementTransformation &T,
|
||||
Vector &dofs) const override
|
||||
@@ -338,6 +340,11 @@ public:
|
||||
ElementTransformation &Trans,
|
||||
DenseMatrix &grad) const override
|
||||
{ ProjectGrad_ND(tk, dof2tk, fe, Trans, grad); }
|
||||
|
||||
protected:
|
||||
void ProjectIntegrated(VectorCoefficient &vc,
|
||||
ElementTransformation &Trans,
|
||||
Vector &dofs) const;
|
||||
};
|
||||
|
||||
class ND_WedgeElement : public VectorFiniteElement
|
||||
|
||||
@@ -17,6 +17,12 @@
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
struct ScalarPyramid
|
||||
{
|
||||
// Default basis type for H1 and L2 pyramids
|
||||
static inline int DefaultType = 1; // Bergot(0) or Fuentes(1)
|
||||
};
|
||||
|
||||
/** Base class for arbitrary order basis functions on pyramid-shaped elements
|
||||
|
||||
This base class provides a common class to store temporary vectors,
|
||||
|
||||
+88
-30
@@ -228,7 +228,19 @@ FiniteElementCollection *FiniteElementCollection::New(const char *name)
|
||||
}
|
||||
else if (!strncmp(name, "H1_", 3))
|
||||
{
|
||||
fec = new H1_FECollection(atoi(name + 7), atoi(name + 3));
|
||||
// Parse pyramid basis type if included in the name
|
||||
const char *pyr = strstr(name, "Pyr");
|
||||
if (pyr == NULL)
|
||||
{
|
||||
// Use default pyramid type elements
|
||||
fec = new H1_FECollection(atoi(name + 7), atoi(name + 3));
|
||||
}
|
||||
else
|
||||
{
|
||||
// Use specific pyramid type elements
|
||||
fec = new H1_FECollection(atoi(name + 7), atoi(name + 3),
|
||||
BasisType::GaussLobatto, atoi(pyr + 3));
|
||||
}
|
||||
}
|
||||
else if (!strncmp(name, "H1Pos_Trace_", 12))
|
||||
{
|
||||
@@ -245,26 +257,44 @@ FiniteElementCollection *FiniteElementCollection::New(const char *name)
|
||||
}
|
||||
else if (!strncmp(name, "H1@", 3))
|
||||
{
|
||||
fec = new H1_FECollection(atoi(name + 9), atoi(name + 5),
|
||||
BasisType::GetType(name[3]));
|
||||
// Parse pyramid basis type if included in the name
|
||||
const char *pyr = strstr(name, "Pyr");
|
||||
if (pyr == NULL)
|
||||
{
|
||||
// Use default pyramid type elements
|
||||
fec = new H1_FECollection(atoi(name + 9), atoi(name + 5),
|
||||
BasisType::GetType(name[3]));
|
||||
}
|
||||
else
|
||||
{
|
||||
// Use specific pyramid type elements
|
||||
fec = new H1_FECollection(atoi(name + 9), atoi(name + 5),
|
||||
BasisType::GetType(name[3]),
|
||||
atoi(pyr + 3));
|
||||
}
|
||||
}
|
||||
else if (!strncmp(name, "L2_T", 4))
|
||||
fec = new L2_FECollection(atoi(name + 10), atoi(name + 6),
|
||||
atoi(name + 4));
|
||||
else if (!strncmp(name, "L2_", 3))
|
||||
else if (!strncmp(name, "L2", 2))
|
||||
{
|
||||
fec = new L2_FECollection(atoi(name + 7), atoi(name + 3));
|
||||
}
|
||||
else if (!strncmp(name, "L2Int_T", 7))
|
||||
{
|
||||
fec = new L2_FECollection(atoi(name + 13), atoi(name + 9),
|
||||
atoi(name + 7), FiniteElement::INTEGRAL);
|
||||
}
|
||||
else if (!strncmp(name, "L2Int_", 6))
|
||||
{
|
||||
fec = new L2_FECollection(atoi(name + 10), atoi(name + 6),
|
||||
BasisType::GaussLegendre,
|
||||
FiniteElement::INTEGRAL);
|
||||
// Parse Map Type
|
||||
const int mtype = strstr(name, "Int") == NULL ?
|
||||
FiniteElement::VALUE : FiniteElement::INTEGRAL;
|
||||
|
||||
// Parse the base order
|
||||
const int p = atoi(strstr(name, "_P") + 2);
|
||||
|
||||
// Parse the mesh dimension
|
||||
const int dim = atoi(strstr(name, "D") - 1);
|
||||
|
||||
// Parse basis type if specified
|
||||
const char *t = strstr(name, "_T");
|
||||
const int btype = t == NULL ? BasisType::GaussLegendre : atoi(t + 2);
|
||||
|
||||
// Parse the pyramid type if specified
|
||||
const char *pyr = strstr(name, "Pyr");
|
||||
const int ptype = pyr == NULL ? 1 : atoi(pyr + 3);
|
||||
|
||||
// Create collection
|
||||
fec = new L2_FECollection(p, dim, btype, mtype, ptype);
|
||||
}
|
||||
else if (!strncmp(name, "RT_Trace_", 9))
|
||||
{
|
||||
@@ -1709,9 +1739,10 @@ const int *RT1_3DFECollection::DofOrderForOrientation(Geometry::Type GeomType,
|
||||
|
||||
|
||||
H1_FECollection::H1_FECollection(const int p, const int dim, const int btype,
|
||||
const int pyrtype)
|
||||
const int pyr_type)
|
||||
: FiniteElementCollection(p)
|
||||
, dim(dim)
|
||||
, p_type(pyr_type)
|
||||
{
|
||||
MFEM_VERIFY(p >= 1, "H1_FECollection requires order >= 1.");
|
||||
MFEM_VERIFY(dim >= 0 && dim <= 3, "H1_FECollection requires 0 <= dim <= 3.");
|
||||
@@ -1724,7 +1755,14 @@ H1_FECollection::H1_FECollection(const int p, const int dim, const int btype,
|
||||
{
|
||||
case BasisType::GaussLobatto:
|
||||
{
|
||||
snprintf(h1_name, 32, "H1_%dD_P%d", dim, p);
|
||||
if (pyr_type == ScalarPyramid::DefaultType)
|
||||
{
|
||||
snprintf(h1_name, 32, "H1_%dD_P%d", dim, p);
|
||||
}
|
||||
else
|
||||
{
|
||||
snprintf(h1_name, 32, "H1_%dD_P%d_Pyr%d", dim, p, pyr_type);
|
||||
}
|
||||
break;
|
||||
}
|
||||
case BasisType::Positive:
|
||||
@@ -1910,11 +1948,11 @@ H1_FECollection::H1_FECollection(const int p, const int dim, const int btype,
|
||||
H1_dof[Geometry::TETRAHEDRON] = (TriDof*pm3)/3;
|
||||
H1_dof[Geometry::CUBE] = QuadDof*pm1;
|
||||
H1_dof[Geometry::PRISM] = TriDof*pm1;
|
||||
if (pyrtype == 0 || b_type == BasisType::Positive)
|
||||
if (pyr_type == 0 || b_type == BasisType::Positive)
|
||||
{
|
||||
H1_dof[Geometry::PYRAMID] = pm2*pm1*(2*p-3)/6; // Bergot (JSC)
|
||||
}
|
||||
else if (pyrtype == 1)
|
||||
else if (pyr_type == 1)
|
||||
{
|
||||
H1_dof[Geometry::PYRAMID] = pm1*pm1*pm1; // Fuentes
|
||||
}
|
||||
@@ -1935,13 +1973,15 @@ H1_FECollection::H1_FECollection(const int p, const int dim, const int btype,
|
||||
new H1_TetrahedronElement(p, btype);
|
||||
H1_Elements[Geometry::CUBE] = new H1_HexahedronElement(p, btype);
|
||||
H1_Elements[Geometry::PRISM] = new H1_WedgeElement(p, btype);
|
||||
if (pyrtype == 0)
|
||||
if (pyr_type == 0)
|
||||
{
|
||||
H1_Elements[Geometry::PYRAMID] = new H1_BergotPyramidElement(p, btype);
|
||||
H1_Elements[Geometry::PYRAMID] =
|
||||
new H1_BergotPyramidElement(p, btype);
|
||||
}
|
||||
else
|
||||
{
|
||||
H1_Elements[Geometry::PYRAMID] = new H1_FuentesPyramidElement(p, btype);
|
||||
H1_Elements[Geometry::PYRAMID] =
|
||||
new H1_FuentesPyramidElement(p, btype);
|
||||
}
|
||||
}
|
||||
|
||||
@@ -2148,6 +2188,7 @@ L2_FECollection::L2_FECollection(const int p, const int dim, const int btype,
|
||||
: FiniteElementCollection(p)
|
||||
, dim(dim)
|
||||
, m_type(map_type)
|
||||
, p_type(pyr_type)
|
||||
{
|
||||
MFEM_VERIFY(p >= 0, "L2_FECollection requires order >= 0.");
|
||||
|
||||
@@ -2163,10 +2204,25 @@ L2_FECollection::L2_FECollection(const int p, const int dim, const int btype,
|
||||
switch (btype)
|
||||
{
|
||||
case BasisType::GaussLegendre:
|
||||
snprintf(d_name, 32, "%s_%dD_P%d", prefix, dim, p);
|
||||
if (pyr_type == ScalarPyramid::DefaultType)
|
||||
{
|
||||
snprintf(d_name, 32, "%s_%dD_P%d", prefix, dim, p);
|
||||
}
|
||||
else
|
||||
{
|
||||
snprintf(d_name, 32, "%s_%dD_P%d_Pyr%d", prefix, dim, p, pyr_type);
|
||||
}
|
||||
break;
|
||||
default:
|
||||
snprintf(d_name, 32, "%s_T%d_%dD_P%d", prefix, btype, dim, p);
|
||||
if (pyr_type == ScalarPyramid::DefaultType)
|
||||
{
|
||||
snprintf(d_name, 32, "%s_T%d_%dD_P%d", prefix, btype, dim, p);
|
||||
}
|
||||
else
|
||||
{
|
||||
snprintf(d_name, 32, "%s_T%d_%dD_P%d_Pyr%d",
|
||||
prefix, btype, dim, p, pyr_type);
|
||||
}
|
||||
}
|
||||
|
||||
for (int g = 0; g < Geometry::NumGeom; g++)
|
||||
@@ -2285,11 +2341,13 @@ L2_FECollection::L2_FECollection(const int p, const int dim, const int btype,
|
||||
L2_Elements[Geometry::PRISM] = new L2_WedgeElement(p, btype);
|
||||
if (pyr_type == 0)
|
||||
{
|
||||
L2_Elements[Geometry::PYRAMID] = new L2_BergotPyramidElement(p, btype);
|
||||
L2_Elements[Geometry::PYRAMID] =
|
||||
new L2_BergotPyramidElement(p, btype);
|
||||
}
|
||||
else
|
||||
{
|
||||
L2_Elements[Geometry::PYRAMID] = new L2_FuentesPyramidElement(p, btype);
|
||||
L2_Elements[Geometry::PYRAMID] =
|
||||
new L2_FuentesPyramidElement(p, btype);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
+10
-5
@@ -100,6 +100,10 @@ public:
|
||||
return FiniteElementForGeometry(GeomType);
|
||||
}
|
||||
|
||||
/** @brief Returns a collection of the trace elements.
|
||||
|
||||
@note The collection is owned by the caller and is NOT deleted in the
|
||||
destructor. */
|
||||
virtual FiniteElementCollection *GetTraceCollection() const;
|
||||
|
||||
virtual ~FiniteElementCollection();
|
||||
@@ -286,7 +290,7 @@ protected:
|
||||
class H1_FECollection : public FiniteElementCollection
|
||||
{
|
||||
protected:
|
||||
int dim, b_type;
|
||||
int dim, b_type, p_type;
|
||||
char h1_name[32];
|
||||
FiniteElement *H1_Elements[Geometry::NumGeom];
|
||||
int H1_dof[Geometry::NumGeom];
|
||||
@@ -295,7 +299,7 @@ protected:
|
||||
public:
|
||||
explicit H1_FECollection(const int p, const int dim = 3,
|
||||
const int btype = BasisType::GaussLobatto,
|
||||
const int pyrtype = 1);
|
||||
const int pyr_type = ScalarPyramid::DefaultType);
|
||||
|
||||
const FiniteElement *
|
||||
FiniteElementForGeometry(Geometry::Type GeomType) const override;
|
||||
@@ -320,7 +324,7 @@ public:
|
||||
const int *GetDofMap(Geometry::Type GeomType, int p) const;
|
||||
|
||||
FiniteElementCollection *Clone(int p) const override
|
||||
{ return new H1_FECollection(p, dim, b_type); }
|
||||
{ return new H1_FECollection(p, dim, b_type, p_type); }
|
||||
|
||||
int GetConstructorOrder() const override
|
||||
{ return base_p; }
|
||||
@@ -367,6 +371,7 @@ private:
|
||||
int dim;
|
||||
int b_type; // BasisType
|
||||
int m_type; // map type
|
||||
int p_type; // Pyramid type (0 -> Bergot, 1 -> Fuentes)
|
||||
char d_name[32];
|
||||
ScalarFiniteElement *L2_Elements[Geometry::NumGeom];
|
||||
ScalarFiniteElement *Tr_Elements[Geometry::NumGeom];
|
||||
@@ -379,7 +384,7 @@ public:
|
||||
L2_FECollection(const int p, const int dim,
|
||||
const int btype = BasisType::GaussLegendre,
|
||||
const int map_type = FiniteElement::VALUE,
|
||||
const int pyrtype = 1);
|
||||
const int pyr_type = ScalarPyramid::DefaultType);
|
||||
|
||||
const FiniteElement *
|
||||
FiniteElementForGeometry(Geometry::Type GeomType) const override;
|
||||
@@ -409,7 +414,7 @@ public:
|
||||
int GetBasisType() const { return b_type; }
|
||||
|
||||
FiniteElementCollection *Clone(int p) const override
|
||||
{ return new L2_FECollection(p, dim, b_type, m_type); }
|
||||
{ return new L2_FECollection(p, dim, b_type, m_type, p_type); }
|
||||
|
||||
int GetConstructorOrder() const override
|
||||
{ return base_p; }
|
||||
|
||||
@@ -91,15 +91,15 @@ void ElasticityAddMultPA(const int dim, const int nDofs,
|
||||
void ElasticityAssembleDiagonalPA(const int dim, const int nDofs,
|
||||
const CoefficientVector &lambda,
|
||||
const CoefficientVector &mu, const GeometricFactors &geom,
|
||||
const DofToQuad &maps, QuadratureFunction &QVec, Vector &diag)
|
||||
const DofToQuad &maps, const IntegrationRule &ir, Vector &diag)
|
||||
{
|
||||
switch (dim)
|
||||
{
|
||||
case 2:
|
||||
ElasticityAssembleDiagonalPA_<2>(nDofs, lambda, mu, geom, maps, QVec, diag);
|
||||
ElasticityAssembleDiagonalPA_<2>(nDofs, lambda, mu, geom, maps, ir, diag);
|
||||
break;
|
||||
case 3:
|
||||
ElasticityAssembleDiagonalPA_<3>(nDofs, lambda, mu, geom, maps, QVec, diag);
|
||||
ElasticityAssembleDiagonalPA_<3>(nDofs, lambda, mu, geom, maps, ir, diag);
|
||||
break;
|
||||
default:
|
||||
MFEM_ABORT("Only dimensions 2 and 3 supported.");
|
||||
|
||||
@@ -38,7 +38,6 @@
|
||||
#include "../../linalg/vector.hpp"
|
||||
#include "../../linalg/tensor.hpp"
|
||||
#include "../quadinterpolator.hpp"
|
||||
#include "../bilininteg.hpp"
|
||||
#include "../coefficient.hpp"
|
||||
#include "../qfunction.hpp"
|
||||
|
||||
@@ -133,12 +132,12 @@ void ElasticityAssembleEA(const int dim, const int i_block, const int j_block,
|
||||
/// @param[in] mu Quadrature function for second Lame param.
|
||||
/// @param[in] geom Geometric factors corresponding to fespace.
|
||||
/// @param[in] maps DofToQuad maps for one element (assume elements all same).
|
||||
/// @param QVec Scratch Q-Vector. nQuad x dim x dim x dim x dim x numEls.
|
||||
/// @param[in] ir Integration rule.
|
||||
/// @param[out] diag diagonal of A. nDofs x dim x numEls.
|
||||
void ElasticityAssembleDiagonalPA(const int dim, const int nDofs,
|
||||
const CoefficientVector &lambda,
|
||||
const CoefficientVector &mu, const GeometricFactors &geom,
|
||||
const DofToQuad &maps, QuadratureFunction &QVec, Vector &diag);
|
||||
const DofToQuad &maps, const IntegrationRule &ir, Vector &diag);
|
||||
|
||||
/// Templated implementation of ElasticityAddMultPA.
|
||||
template<int dim, int i_block = -1, int j_block = -1>
|
||||
@@ -280,77 +279,67 @@ void ElasticityAddMultPA_(const int nDofs, const FiniteElementSpace &fespace,
|
||||
template<int dim>
|
||||
void ElasticityAssembleDiagonalPA_(const int nDofs,
|
||||
const CoefficientVector &lambda,
|
||||
const CoefficientVector &mu, const GeometricFactors &geom,
|
||||
const DofToQuad &maps, QuadratureFunction &QVec, Vector &diag)
|
||||
const CoefficientVector &mu,
|
||||
const GeometricFactors &geom,
|
||||
const DofToQuad &maps,
|
||||
const IntegrationRule &ir,
|
||||
Vector &diag)
|
||||
{
|
||||
using future::tensor;
|
||||
using future::make_tensor;
|
||||
using future::det;
|
||||
using future::inv;
|
||||
using future::make_tensor;
|
||||
using future::tensor;
|
||||
|
||||
// Assuming all elements are the same
|
||||
const auto &ir = QVec.GetIntRule(0);
|
||||
static constexpr int d = dim;
|
||||
const int numPoints = ir.GetNPoints();
|
||||
const int numEls = lambda.Size()/numPoints;
|
||||
const int numEls = lambda.Size() / numPoints;
|
||||
|
||||
const auto lamDev = Reshape(lambda.Read(), numPoints, numEls);
|
||||
const auto muDev = Reshape(mu.Read(), numPoints, numEls);
|
||||
const auto J = Reshape(geom.J.Read(), numPoints, d, d, numEls);
|
||||
auto Q = Reshape(QVec.ReadWrite(), numPoints, d,d, d, numEls);
|
||||
const real_t *ipWeights = ir.GetWeights().Read();
|
||||
mfem::forall_2D(numEls, numPoints,1, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(p, x,numPoints)
|
||||
{
|
||||
auto invJ = inv(make_tensor<d, d>(
|
||||
[&](int i, int j) { return J(p, i, j, e); }));
|
||||
const real_t w = ipWeights[p] /det(invJ);
|
||||
for (int n = 0; n < d; n++)
|
||||
{
|
||||
for (int m = 0; m < d; m++)
|
||||
{
|
||||
for (int q = 0; q < d; q++)
|
||||
{
|
||||
// compute contraction of 4*sym(grad(u))sym(grad(v)) term.
|
||||
// this contraction could be made slightly cheaper using Voigt
|
||||
// notation, but repeated entries are summed for simplicity.
|
||||
real_t contraction = 0.;
|
||||
for (int a = 0; a < d; a++)
|
||||
{
|
||||
for (int b = 0; b < d; b++)
|
||||
{
|
||||
contraction += ((a == q)*invJ(m,b) + (b==q)*invJ(m,a))*((a == q)
|
||||
*invJ(n, b) + (b==q)*invJ(n,a));
|
||||
}
|
||||
}
|
||||
// lambda*div(u)*div(v) + 2*mu*sym(grad(u))*sym(grad(v))
|
||||
// contraction = 4*sym(grad(u))sym(grad(v))
|
||||
Q(p,m,n,q,e) = w*(lamDev(p, e)*invJ(m,q)*invJ(n,q)
|
||||
+ 0.5*muDev(p, e)*contraction);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
|
||||
// Reduce quadrature function to an E-Vector
|
||||
const auto QRead = Reshape(QVec.Read(), numPoints, d, d, d, numEls);
|
||||
auto diagDev = Reshape(diag.Write(), nDofs, d, numEls);
|
||||
const auto G = Reshape(maps.G.Read(), numPoints, d, nDofs);
|
||||
auto diagDev = Reshape(diag.Write(), nDofs, d, numEls);
|
||||
|
||||
mfem::forall_2D(numEls, d, nDofs, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(i, y, nDofs)
|
||||
MFEM_FOREACH_THREAD_DIRECT(i, y, nDofs)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(q, x, d)
|
||||
MFEM_FOREACH_THREAD_DIRECT(q, x, d)
|
||||
{
|
||||
real_t sum = 0.;
|
||||
for (int n = 0; n < d; n++)
|
||||
real_t sum = 0.0;
|
||||
for (int p = 0; p < numPoints; p++)
|
||||
{
|
||||
for (int m = 0; m < d; m++)
|
||||
const auto invJ = inv(make_tensor<d, d>([&](int r, int c)
|
||||
{
|
||||
for (int p = 0; p < numPoints; p++ )
|
||||
return J(p, r, c, e);
|
||||
}));
|
||||
const real_t w = ipWeights[p] / det(invJ);
|
||||
|
||||
for (int n = 0; n < d; n++)
|
||||
{
|
||||
for (int m = 0; m < d; m++)
|
||||
{
|
||||
sum += QRead(p,m,n,q,e)*G(p,m,i)*G(p,n,i);
|
||||
// compute contraction of 4*sym(grad(u))sym(grad(v)) term.
|
||||
// this contraction could be made slightly cheaper using Voigt
|
||||
// notation, but repeated entries are summed for simplicity.
|
||||
real_t contraction = 0.0;
|
||||
for (int a = 0; a < d; a++)
|
||||
{
|
||||
for (int b = 0; b < d; b++)
|
||||
{
|
||||
contraction +=
|
||||
((a == q) * invJ(m, b) + (b == q) * invJ(m, a)) *
|
||||
((a == q) * invJ(n, b) + (b == q) * invJ(n, a));
|
||||
}
|
||||
}
|
||||
// lambda*div(u)*div(v) + 2*mu*sym(grad(u))*sym(grad(v))
|
||||
// contraction = 4*sym(grad(u))sym(grad(v))
|
||||
const real_t Q =
|
||||
w * (lamDev(p, e) * invJ(m, q) * invJ(n, q)
|
||||
+ 0.5 * muDev(p, e) * contraction);
|
||||
sum += Q * G(p, m, i) * G(p, n, i);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@@ -10,7 +10,6 @@
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "../bilininteg.hpp"
|
||||
#include "../gridfunc.hpp"
|
||||
#include "../qfunction.hpp"
|
||||
#include "bilininteg_elasticity_kernels.hpp"
|
||||
|
||||
@@ -59,9 +58,8 @@ void ElasticityIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
|
||||
void ElasticityIntegrator::AssembleDiagonalPA(Vector &diag)
|
||||
{
|
||||
q_vec->SetVDim(vdim*vdim*vdim*vdim);
|
||||
internal::ElasticityAssembleDiagonalPA(vdim, ndofs, *lambda_quad, *mu_quad,
|
||||
*geom, *maps, *q_vec, diag);
|
||||
*geom, *maps, *IntRule, diag);
|
||||
}
|
||||
|
||||
void ElasticityIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
|
||||
@@ -147,18 +147,16 @@ void PAHcurlMassAssembleDiagonal3D(const int D1D,
|
||||
}); // end of element loop
|
||||
}
|
||||
|
||||
void PAHcurlMassApply2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &bo,
|
||||
const Array<real_t> &bc,
|
||||
const Array<real_t> &bot,
|
||||
const Array<real_t> &bct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
void PAHcurlMassApply2D(const int NE, const bool symmetric,
|
||||
[[maybe_unused]] const bool scalar_coeff,
|
||||
const Array<real_t> &bo, const Array<real_t> &bc,
|
||||
const Array<real_t> &bot, const Array<real_t> &bct,
|
||||
const Vector &pa_data, const Vector &x, Vector &y,
|
||||
const int D1D, [[maybe_unused]] const int TestD1D,
|
||||
const int Q1D)
|
||||
{
|
||||
MFEM_ASSERT(D1D == TestD1D,
|
||||
"Trial and Test space must have the same number of dofs");
|
||||
auto Bo = Reshape(bo.Read(), Q1D, D1D-1);
|
||||
auto Bc = Reshape(bc.Read(), Q1D, D1D);
|
||||
auto Bot = Reshape(bot.Read(), D1D-1, Q1D);
|
||||
@@ -277,18 +275,16 @@ void PAHcurlMassApply2D(const int D1D,
|
||||
}); // end of element loop
|
||||
}
|
||||
|
||||
void PAHcurlMassApply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &bo,
|
||||
const Array<real_t> &bc,
|
||||
const Array<real_t> &bot,
|
||||
const Array<real_t> &bct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
void PAHcurlMassApply3D(const int NE, const bool symmetric,
|
||||
[[maybe_unused]] const bool scalar_coeff,
|
||||
const Array<real_t> &bo, const Array<real_t> &bc,
|
||||
const Array<real_t> &bot, const Array<real_t> &bct,
|
||||
const Vector &pa_data, const Vector &x, Vector &y,
|
||||
const int D1D, [[maybe_unused]] const int TestD1D,
|
||||
const int Q1D)
|
||||
{
|
||||
MFEM_VERIFY(D1D == TestD1D,
|
||||
"Trial and test spaces must have same number of dofs");
|
||||
MFEM_VERIFY(D1D <= DeviceDofQuadLimits::Get().HCURL_MAX_D1D,
|
||||
"Error: D1D > MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().HCURL_MAX_Q1D,
|
||||
|
||||
@@ -181,228 +181,312 @@ inline void SmemPAHcurlMassAssembleDiagonal3D(const int d1d,
|
||||
}
|
||||
|
||||
// PA H(curl) Mass Apply 2D kernel
|
||||
void PAHcurlMassApply2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &bo,
|
||||
const Array<real_t> &bc,
|
||||
const Array<real_t> &bot,
|
||||
const Array<real_t> &bct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y);
|
||||
void PAHcurlMassApply2D(const int NE, const bool symmetric,
|
||||
const bool scalar_coeff, const Array<real_t> &bo,
|
||||
const Array<real_t> &bc, const Array<real_t> &bot,
|
||||
const Array<real_t> &bct, const Vector &pa_data,
|
||||
const Vector &x, Vector &y, const int TrialD1D,
|
||||
const int TestD1D, const int Q1D);
|
||||
|
||||
// PA H(curl) Mass Apply 3D kernel
|
||||
void PAHcurlMassApply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &bo,
|
||||
const Array<real_t> &bc,
|
||||
const Array<real_t> &bot,
|
||||
const Array<real_t> &bct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y);
|
||||
void PAHcurlMassApply3D(const int NE, const bool symmetric,
|
||||
[[maybe_unused]] const bool scalar_coeff,
|
||||
const Array<real_t> &bo, const Array<real_t> &bc,
|
||||
const Array<real_t> &bot, const Array<real_t> &bct,
|
||||
const Vector &pa_data, const Vector &x, Vector &y,
|
||||
const int TrialD1D, [[maybe_unused]] const int TestD1D,
|
||||
const int Q1D);
|
||||
|
||||
// Shared memory PA H(curl) Mass Apply 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAHcurlMassApply3D(const int d1d,
|
||||
const int q1d,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &bo,
|
||||
const Array<real_t> &bc,
|
||||
const Array<real_t> &bot,
|
||||
const Array<real_t> &bct,
|
||||
const Vector &pa_data,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
template <int T_D1D = 0, int T_Q1D = 0, int TBATCH = 0, bool ACCUMULATE = true>
|
||||
inline void SmemPAHcurlMassApply3D(
|
||||
const int NE, const bool symmetric, [[maybe_unused]] const bool scalar_coeff,
|
||||
const Array<real_t> &bo, const Array<real_t> &bc,
|
||||
[[maybe_unused]] const Array<real_t> &bot,
|
||||
[[maybe_unused]] const Array<real_t> &bct, const Vector &pa_data,
|
||||
const Vector &x, Vector &y, const int d1d = 0,
|
||||
[[maybe_unused]] const int test_d1d = 0, const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(T_D1D || d1d <= DeviceDofQuadLimits::Get().HCURL_MAX_D1D,
|
||||
"Error: d1d > HCURL_MAX_D1D");
|
||||
MFEM_VERIFY(T_Q1D || q1d <= DeviceDofQuadLimits::Get().HCURL_MAX_Q1D,
|
||||
"Error: q1d > HCURL_MAX_Q1D");
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_ASSERT(Q1D >= D1D, "Expected Q1D >= D1D");
|
||||
const int dataSize = symmetric ? 6 : 9;
|
||||
|
||||
auto Bo = Reshape(bo.Read(), Q1D, D1D-1);
|
||||
auto Bc = Reshape(bc.Read(), Q1D, D1D);
|
||||
auto op = Reshape(pa_data.Read(), Q1D, Q1D, Q1D, dataSize, NE);
|
||||
auto X = Reshape(x.Read(), 3*(D1D-1)*D1D*D1D, NE);
|
||||
auto Y = Reshape(y.ReadWrite(), 3*(D1D-1)*D1D*D1D, NE);
|
||||
// assume trial space == test space
|
||||
auto Bo = bo.Read();
|
||||
auto Bc = bc.Read();
|
||||
auto op =
|
||||
Reshape(pa_data.Read(), Q1D, Q1D, Q1D, dataSize, NE);
|
||||
auto X_ = Reshape(x.Read(), 3 * (D1D - 1) * D1D * D1D, NE);
|
||||
auto y_ = y.ReadWrite();
|
||||
|
||||
mfem::forall_3D(NE, Q1D, Q1D, Q1D, [=] MFEM_HOST_DEVICE (int e)
|
||||
constexpr int MD_ = T_D1D ? T_D1D : DofQuadLimits::HCURL_MAX_D1D;
|
||||
constexpr int MQ_ = T_Q1D ? T_Q1D : DofQuadLimits::HCURL_MAX_Q1D;
|
||||
constexpr int MDQ_ = std::max(MD_, MQ_);
|
||||
constexpr int MB_ = TBATCH ? TBATCH : 1;
|
||||
|
||||
mfem::forall_2D_batch<MDQ_ * MDQ_ * MDQ_ * MB_>(
|
||||
NE, MDQ_ * MDQ_ * MDQ_, 1, MB_, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
#if defined(__CUDA_ARCH__) || defined(__HIP_DEVICE_COMPILE__)
|
||||
constexpr int nbz = TBATCH ? TBATCH : 1;
|
||||
int tidz = MFEM_THREAD_ID(z);
|
||||
#else
|
||||
constexpr int nbz = 1;
|
||||
constexpr int tidz = 0;
|
||||
#endif
|
||||
|
||||
constexpr int VDIM = 3;
|
||||
constexpr int MD1D = T_D1D ? T_D1D : DofQuadLimits::HCURL_MAX_D1D;
|
||||
constexpr int MQ1D = T_Q1D ? T_Q1D : DofQuadLimits::HCURL_MAX_Q1D;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int MDQ = std::max(MD1D, MQ1D);
|
||||
|
||||
MFEM_SHARED real_t sBo[MQ1D][MD1D];
|
||||
MFEM_SHARED real_t sBc[MQ1D][MD1D];
|
||||
// nvcc limit work-around: can't have Y_ be captured first in
|
||||
// if constexpr, so capture y_ and construct Y_ locally
|
||||
// only works on GPU
|
||||
auto Y = Reshape(y_, VDIM * (D1D - 1) * D1D * D1D, NE);
|
||||
|
||||
real_t op9[9];
|
||||
MFEM_SHARED real_t sop[9*MQ1D*MQ1D];
|
||||
MFEM_SHARED real_t mass[MQ1D][MQ1D][3];
|
||||
MFEM_SHARED real_t sBo[MDQ * (MD1D - 1)];
|
||||
MFEM_SHARED real_t sBc[MDQ * MD1D];
|
||||
auto BO = Reshape(sBo, Q1D, D1D - 1);
|
||||
auto BC = Reshape(sBc, Q1D, D1D);
|
||||
|
||||
MFEM_SHARED real_t sX[MD1D][MD1D][MD1D];
|
||||
MFEM_SHARED real_t sX[nbz * VDIM * (MD1D - 1) * MD1D * MD1D];
|
||||
MFEM_SHARED real_t sm0[nbz * VDIM * MDQ * MDQ * MDQ];
|
||||
MFEM_SHARED real_t sm1[nbz * VDIM * MDQ * MDQ * MDQ];
|
||||
|
||||
MFEM_FOREACH_THREAD(qx,x,Q1D)
|
||||
real_t(*X)[nbz][(MD1D - 1) * MD1D * MD1D] =
|
||||
(real_t(*)[nbz][(MD1D - 1) * MD1D * MD1D])(sX);
|
||||
// shapes of buffers always use MQ1D to mitigate shared memory bank
|
||||
// conflicts
|
||||
real_t(*DDQ)[nbz][MQ1D][MQ1D][MQ1D] =
|
||||
(real_t(*)[nbz][MQ1D][MQ1D][MQ1D])(sm0);
|
||||
real_t(*DQQ)[nbz][MQ1D][MQ1D][MQ1D] =
|
||||
(real_t(*)[nbz][MQ1D][MQ1D][MQ1D])(sm1);
|
||||
real_t(*QQQ)[nbz][MQ1D][MQ1D][MQ1D] =
|
||||
(real_t(*)[nbz][MQ1D][MQ1D][MQ1D])(sm0);
|
||||
real_t(*QQD)[nbz][MQ1D][MQ1D][MQ1D] =
|
||||
(real_t(*)[nbz][MQ1D][MQ1D][MQ1D])(sm1);
|
||||
real_t(*QDD)[nbz][MQ1D][MQ1D][MQ1D] =
|
||||
(real_t(*)[nbz][MQ1D][MQ1D][MQ1D])(sm0);
|
||||
|
||||
// load dofs into smem
|
||||
const int offset = (D1D - 1) * D1D * D1D;
|
||||
MFEM_FOREACH_THREAD_DIRECT(ix, x, offset)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy,y,Q1D)
|
||||
for (int dim = 0; dim < VDIM; ++dim)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qz,z,Q1D)
|
||||
{
|
||||
for (int i=0; i<dataSize; ++i)
|
||||
{
|
||||
op9[i] = op(qx,qy,qz,i,e);
|
||||
}
|
||||
}
|
||||
X[dim][tidz][ix] = X_(ix + dim * offset, e);
|
||||
}
|
||||
}
|
||||
|
||||
const int tidx = MFEM_THREAD_ID(x);
|
||||
const int tidy = MFEM_THREAD_ID(y);
|
||||
const int tidz = MFEM_THREAD_ID(z);
|
||||
|
||||
// load basis functions data
|
||||
if (tidz == 0)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(d,y,D1D)
|
||||
MFEM_FOREACH_THREAD_DIRECT(ix, x, D1D * Q1D) { sBc[ix] = Bc[ix]; }
|
||||
MFEM_FOREACH_THREAD_DIRECT(ix, x, (D1D - 1) * Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(q,x,Q1D)
|
||||
sBo[ix] = Bo[ix];
|
||||
}
|
||||
}
|
||||
|
||||
for (int dim0 = 0; dim0 < VDIM; ++dim0)
|
||||
{
|
||||
MFEM_SYNC_THREAD;
|
||||
// sum factor to QQQ = Q_{dim0,dim1} B X_{dim1}
|
||||
for (int dim1 = 0; dim1 < VDIM; ++dim1)
|
||||
{
|
||||
const int D1Dz = (dim1 == 2) ? D1D - 1 : D1D;
|
||||
const int D1Dy = (dim1 == 1) ? D1D - 1 : D1D;
|
||||
const int D1Dx = (dim1 == 0) ? D1D - 1 : D1D;
|
||||
|
||||
// threads assigned to mitigate bank conflicts
|
||||
MFEM_FOREACH_THREAD_DIRECT_3D_OFFSET(qx, dy, dz, x, Q1D, D1Dy, D1Dz,
|
||||
Q1D, Q1D, Q1D)
|
||||
{
|
||||
sBc[q][d] = Bc(q,d);
|
||||
if (d < D1D-1)
|
||||
real_t u = 0;
|
||||
for (int dx = 0; dx < D1Dx; ++dx)
|
||||
{
|
||||
sBo[q][d] = Bo(q,d);
|
||||
real_t b;
|
||||
if (dim1 == 0)
|
||||
{
|
||||
b = BO(qx, dx);
|
||||
}
|
||||
else
|
||||
{
|
||||
b = BC(qx, dx);
|
||||
}
|
||||
u += X[dim1][tidz][dx + (dy + dz * D1Dy) * D1Dx] * b;
|
||||
}
|
||||
DDQ[dim1][tidz][dz][dy][qx] = u;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
for (int dim1 = 0; dim1 < VDIM; ++dim1)
|
||||
{
|
||||
const int D1Dz = (dim1 == 2) ? D1D - 1 : D1D;
|
||||
const int D1Dy = (dim1 == 1) ? D1D - 1 : D1D;
|
||||
// const int D1Dx = (dim1 == 0) ? D1D - 1 : D1D;
|
||||
// threads assigned to mitigate bank conflicts
|
||||
MFEM_FOREACH_THREAD_DIRECT_3D_OFFSET(qx, qy, dz, x, Q1D, Q1D, D1Dz,
|
||||
Q1D, Q1D, Q1D)
|
||||
{
|
||||
real_t u = 0;
|
||||
for (int dy = 0; dy < D1Dy; ++dy)
|
||||
{
|
||||
real_t b;
|
||||
if (dim1 == 1)
|
||||
{
|
||||
b = BO(qy, dy);
|
||||
}
|
||||
else
|
||||
{
|
||||
b = BC(qy, dy);
|
||||
}
|
||||
u += DDQ[dim1][tidz][dz][dy][qx] * b;
|
||||
}
|
||||
DQQ[dim1][tidz][dz][qy][qx] = u;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
for (int dim1 = 0; dim1 < VDIM; ++dim1)
|
||||
{
|
||||
const int D1Dz = (dim1 == 2) ? D1D - 1 : D1D;
|
||||
// const int D1Dy = (dim1 == 1) ? D1D - 1 : D1D;
|
||||
// const int D1Dx = (dim1 == 0) ? D1D - 1 : D1D;
|
||||
MFEM_FOREACH_THREAD_DIRECT_3D(qx, qy, qz, x, Q1D, Q1D, Q1D)
|
||||
{
|
||||
real_t u = 0;
|
||||
for (int dz = 0; dz < D1Dz; ++dz)
|
||||
{
|
||||
real_t b;
|
||||
if (dim1 == 2)
|
||||
{
|
||||
b = BO(qz, dz);
|
||||
}
|
||||
else
|
||||
{
|
||||
b = BC(qz, dz);
|
||||
}
|
||||
u += DQQ[dim1][tidz][dz][qy][qx] * b;
|
||||
}
|
||||
// pa_data is row major
|
||||
int idx;
|
||||
if (symmetric)
|
||||
{
|
||||
int row;
|
||||
int col;
|
||||
if (dim0 > dim1)
|
||||
{
|
||||
row = dim1;
|
||||
col = dim0;
|
||||
}
|
||||
else
|
||||
{
|
||||
row = dim0;
|
||||
col = dim1;
|
||||
}
|
||||
idx = col + VDIM * row - row * (row + 1) / 2;
|
||||
}
|
||||
else
|
||||
{
|
||||
idx = dim0 * VDIM + dim1;
|
||||
}
|
||||
QQQ[dim1][tidz][qz][qy][qx] = op(qx, qy, qz, idx, e) * u;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
// sum factor back to Y
|
||||
// Assume bot and bct == bo^t and bc^t respectively (i.e. test ==
|
||||
// trial functions), skip loading them again.
|
||||
{
|
||||
const int D1Dz = (dim0 == 2) ? D1D - 1 : D1D;
|
||||
const int D1Dy = (dim0 == 1) ? D1D - 1 : D1D;
|
||||
const int D1Dx = (dim0 == 0) ? D1D - 1 : D1D;
|
||||
// threads assigned to mitigate bank conflicts
|
||||
MFEM_FOREACH_THREAD_DIRECT_3D_OFFSET(dz, qx, qy, x, D1Dz, Q1D, Q1D,
|
||||
Q1D, Q1D, Q1D)
|
||||
{
|
||||
for (int dim1 = 0; dim1 < VDIM; ++dim1)
|
||||
{
|
||||
real_t u = 0;
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
real_t b = 0;
|
||||
if (dim0 == 2)
|
||||
{
|
||||
b = BO(qz, dz);
|
||||
}
|
||||
else
|
||||
{
|
||||
b = BC(qz, dz);
|
||||
}
|
||||
u += QQQ[dim1][tidz][qz][qy][qx] * b;
|
||||
}
|
||||
QQD[dim1][tidz][qy][qx][dz] = u;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
// threads assigned to mitigate bank conflicts
|
||||
MFEM_FOREACH_THREAD_DIRECT_3D_OFFSET(dy, dz, qx, x, D1Dy, D1Dz, Q1D,
|
||||
Q1D, Q1D, Q1D)
|
||||
{
|
||||
for (int dim1 = 0; dim1 < VDIM; ++dim1)
|
||||
{
|
||||
real_t u = 0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
real_t b;
|
||||
if (dim0 == 1)
|
||||
{
|
||||
b = BO(qy, dy);
|
||||
}
|
||||
else
|
||||
{
|
||||
b = BC(qy, dy);
|
||||
}
|
||||
u += QQD[dim1][tidz][qy][qx][dz] * b;
|
||||
}
|
||||
QDD[dim1][tidz][qx][dz][dy] = u;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT_3D(dx, dy, dz, x, D1Dx, D1Dy, D1Dz)
|
||||
{
|
||||
int ix = dx + D1Dx * (dy + D1Dy * dz);
|
||||
real_t u = 0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
real_t b;
|
||||
if (dim0 == 0)
|
||||
{
|
||||
b = BO(qx, dx);
|
||||
}
|
||||
else
|
||||
{
|
||||
b = BC(qx, dx);
|
||||
}
|
||||
for (int dim1 = 0; dim1 < VDIM; ++dim1)
|
||||
{
|
||||
u += QDD[dim1][tidz][qx][dz][dy] * b;
|
||||
}
|
||||
}
|
||||
if constexpr (ACCUMULATE)
|
||||
{
|
||||
Y(ix + dim0 * offset, e) += u;
|
||||
}
|
||||
else
|
||||
{
|
||||
Y(ix + dim0 * offset, e) = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
for (int qz=0; qz < Q1D; ++qz)
|
||||
{
|
||||
int osc = 0;
|
||||
for (int c = 0; c < VDIM; ++c) // loop over x, y, z components
|
||||
{
|
||||
const int D1Dz = (c == 2) ? D1D - 1 : D1D;
|
||||
const int D1Dy = (c == 1) ? D1D - 1 : D1D;
|
||||
const int D1Dx = (c == 0) ? D1D - 1 : D1D;
|
||||
|
||||
MFEM_FOREACH_THREAD(dz,z,D1Dz)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy,y,D1Dy)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx,x,D1Dx)
|
||||
{
|
||||
sX[dz][dy][dx] = X(dx + ((dy + (dz * D1Dy)) * D1Dx) + osc, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
if (tidz == qz)
|
||||
{
|
||||
for (int i=0; i<dataSize; ++i)
|
||||
{
|
||||
sop[i + (dataSize*tidx) + (dataSize*Q1D*tidy)] = op9[i];
|
||||
}
|
||||
|
||||
MFEM_FOREACH_THREAD(qy,y,Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx,x,Q1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
|
||||
for (int dz = 0; dz < D1Dz; ++dz)
|
||||
{
|
||||
const real_t wz = (c == 2) ? sBo[qz][dz] : sBc[qz][dz];
|
||||
for (int dy = 0; dy < D1Dy; ++dy)
|
||||
{
|
||||
const real_t wy = (c == 1) ? sBo[qy][dy] : sBc[qy][dy];
|
||||
for (int dx = 0; dx < D1Dx; ++dx)
|
||||
{
|
||||
const real_t t = sX[dz][dy][dx];
|
||||
const real_t wx = (c == 0) ? sBo[qx][dx] : sBc[qx][dx];
|
||||
u += t * wx * wy * wz;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
mass[qy][qx][c] = u;
|
||||
} // qx
|
||||
} // qy
|
||||
} // tidz == qz
|
||||
|
||||
osc += D1Dx * D1Dy * D1Dz;
|
||||
MFEM_SYNC_THREAD;
|
||||
} // c
|
||||
|
||||
MFEM_SYNC_THREAD; // Sync mass[qy][qx][d] and sop
|
||||
|
||||
osc = 0;
|
||||
for (int c = 0; c < VDIM; ++c) // loop over x, y, z components
|
||||
{
|
||||
const int D1Dz = (c == 2) ? D1D - 1 : D1D;
|
||||
const int D1Dy = (c == 1) ? D1D - 1 : D1D;
|
||||
const int D1Dx = (c == 0) ? D1D - 1 : D1D;
|
||||
|
||||
real_t dxyz = 0.0;
|
||||
|
||||
MFEM_FOREACH_THREAD(dz,z,D1Dz)
|
||||
{
|
||||
const real_t wz = (c == 2) ? sBo[qz][dz] : sBc[qz][dz];
|
||||
|
||||
MFEM_FOREACH_THREAD(dy,y,D1Dy)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx,x,D1Dx)
|
||||
{
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
const real_t wy = (c == 1) ? sBo[qy][dy] : sBc[qy][dy];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const int os = (dataSize*qx) + (dataSize*Q1D*qy);
|
||||
const int id1 = os + ((c == 0) ? 0 : ((c == 1) ? (symmetric ? 1 : 3) :
|
||||
(symmetric ? 2 : 6))); // O11, O21, O31
|
||||
const int id2 = os + ((c == 0) ? 1 : ((c == 1) ? (symmetric ? 3 : 4) :
|
||||
(symmetric ? 4 : 7))); // O12, O22, O32
|
||||
const int id3 = os + ((c == 0) ? 2 : ((c == 1) ? (symmetric ? 4 : 5) :
|
||||
(symmetric ? 5 : 8))); // O13, O23, O33
|
||||
|
||||
const real_t m_c = (sop[id1] * mass[qy][qx][0]) + (sop[id2] * mass[qy][qx][1]) +
|
||||
(sop[id3] * mass[qy][qx][2]);
|
||||
|
||||
const real_t wx = (c == 0) ? sBo[qx][dx] : sBc[qx][dx];
|
||||
dxyz += m_c * wx * wy * wz;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD(dz,z,D1Dz)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy,y,D1Dy)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx,x,D1Dx)
|
||||
{
|
||||
Y(dx + ((dy + (dz * D1Dy)) * D1Dx) + osc, e) += dxyz;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
osc += D1Dx * D1Dy * D1Dz;
|
||||
} // c loop
|
||||
} // qz
|
||||
}); // end of element loop
|
||||
}
|
||||
|
||||
|
||||
@@ -62,6 +62,30 @@ void PAHcurlHdivMassApply2D(const int D1D,
|
||||
const Vector &x_,
|
||||
Vector &y_);
|
||||
|
||||
/// H(curl) test, H(div) trial
|
||||
inline void
|
||||
PAHcurlHdivMassApply2D(const int NE, const bool, const bool scalarCoeff,
|
||||
const Array<real_t> &Bo_, const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_, const Array<real_t> &Bct_,
|
||||
const Vector &op_, const Vector &x_, Vector &y_,
|
||||
const int D1D, const int D1Dtest, const int Q1D)
|
||||
{
|
||||
return PAHcurlHdivMassApply2D(D1D, D1Dtest, Q1D, NE, scalarCoeff, false,
|
||||
false, Bo_, Bc_, Bot_, Bct_, op_, x_, y_);
|
||||
}
|
||||
|
||||
/// H(div) test, H(curl) trial
|
||||
inline void
|
||||
PAHdivHcurlMassApply2D(const int NE, const bool, const bool scalarCoeff,
|
||||
const Array<real_t> &Bo_, const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_, const Array<real_t> &Bct_,
|
||||
const Vector &op_, const Vector &x_, Vector &y_,
|
||||
const int D1D, const int D1Dtest, const int Q1D)
|
||||
{
|
||||
return PAHcurlHdivMassApply2D(D1D, D1Dtest, Q1D, NE, scalarCoeff, true,
|
||||
false, Bo_, Bc_, Bot_, Bct_, op_, x_, y_);
|
||||
}
|
||||
|
||||
// PA H(curl)-H(div) Mass Apply 3D kernel
|
||||
void PAHcurlHdivMassApply3D(const int D1D,
|
||||
const int D1Dtest,
|
||||
@@ -78,6 +102,30 @@ void PAHcurlHdivMassApply3D(const int D1D,
|
||||
const Vector &x_,
|
||||
Vector &y_);
|
||||
|
||||
/// H(curl) test, H(div) trial
|
||||
inline void
|
||||
PAHcurlHdivMassApply3D(const int NE, const bool, const bool scalarCoeff,
|
||||
const Array<real_t> &Bo_, const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_, const Array<real_t> &Bct_,
|
||||
const Vector &op_, const Vector &x_, Vector &y_,
|
||||
const int D1D, const int D1Dtest, const int Q1D)
|
||||
{
|
||||
PAHcurlHdivMassApply3D(D1D, D1Dtest, Q1D, NE, scalarCoeff, false, false, Bo_,
|
||||
Bc_, Bot_, Bct_, op_, x_, y_);
|
||||
}
|
||||
|
||||
/// H(div) test, H(curl) trial
|
||||
inline void
|
||||
PAHdivHcurlMassApply3D(const int NE, const bool, const bool scalarCoeff,
|
||||
const Array<real_t> &Bo_, const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_, const Array<real_t> &Bct_,
|
||||
const Vector &op_, const Vector &x_, Vector &y_,
|
||||
const int D1D, const int D1Dtest, const int Q1D)
|
||||
{
|
||||
PAHcurlHdivMassApply3D(D1D, D1Dtest, Q1D, NE, scalarCoeff, true, false, Bo_,
|
||||
Bc_, Bot_, Bct_, op_, x_, y_);
|
||||
}
|
||||
|
||||
// PA H(curl)-H(div) Curl Apply 3D kernel
|
||||
template<int T_D1D = 0, int T_D1D_TEST = 0, int T_Q1D = 0>
|
||||
inline void PAHcurlHdivApply3D(const int d1d,
|
||||
|
||||
@@ -294,61 +294,14 @@ void PAHdivMassAssembleDiagonal3D(const int D1D,
|
||||
}); // end of element loop
|
||||
}
|
||||
|
||||
void PAHdivMassApply(const int dim,
|
||||
const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &Bo,
|
||||
const Array<real_t> &Bc,
|
||||
const Array<real_t> &Bot,
|
||||
const Array<real_t> &Bct,
|
||||
const Vector &op,
|
||||
const Vector &x,
|
||||
Vector &y)
|
||||
{
|
||||
const int id = (D1D << 4) | Q1D;
|
||||
|
||||
if (dim == 2)
|
||||
{
|
||||
switch (id)
|
||||
{
|
||||
case 0x22: return SmemPAHdivMassApply2D<2,2>(NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
case 0x33: return SmemPAHdivMassApply2D<3,3>(NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
case 0x44: return SmemPAHdivMassApply2D<4,4>(NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
case 0x55: return SmemPAHdivMassApply2D<5,5>(NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
default: // fallback
|
||||
return PAHdivMassApply2D(D1D,Q1D,NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
}
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
switch (id)
|
||||
{
|
||||
case 0x23: return SmemPAHdivMassApply3D<2,3>(NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
case 0x34: return SmemPAHdivMassApply3D<3,4>(NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
case 0x45: return SmemPAHdivMassApply3D<4,5>(NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
case 0x56: return SmemPAHdivMassApply3D<5,6>(NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
case 0x67: return SmemPAHdivMassApply3D<6,7>(NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
case 0x78: return SmemPAHdivMassApply3D<7,8>(NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
default: // fallback
|
||||
return PAHdivMassApply3D(D1D,Q1D,NE,symmetric,Bo,Bc,Bot,Bct,op,x,y);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
void PAHdivMassApply2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_,
|
||||
const Array<real_t> &Bct_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHdivMassApply2D(const int NE, const bool symmetric, const bool,
|
||||
const Array<real_t> &Bo_, const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_, const Array<real_t> &Bct_,
|
||||
const Vector &op_, const Vector &x_, Vector &y_,
|
||||
const int D1D, const int TestD1D, const int Q1D)
|
||||
{
|
||||
MFEM_VERIFY(D1D == TestD1D,
|
||||
"Trial and test spaces must have same number of dofs");
|
||||
auto Bo = Reshape(Bo_.Read(), Q1D, D1D-1);
|
||||
auto Bc = Reshape(Bc_.Read(), Q1D, D1D);
|
||||
auto Bot = Reshape(Bot_.Read(), D1D-1, Q1D);
|
||||
@@ -468,18 +421,14 @@ void PAHdivMassApply2D(const int D1D,
|
||||
}); // end of element loop
|
||||
}
|
||||
|
||||
void PAHdivMassApply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_,
|
||||
const Array<real_t> &Bct_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_)
|
||||
void PAHdivMassApply3D(const int NE, const bool symmetric, const bool,
|
||||
const Array<real_t> &Bo_, const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_, const Array<real_t> &Bct_,
|
||||
const Vector &op_, const Vector &x_, Vector &y_,
|
||||
const int D1D, const int TestD1D, const int Q1D)
|
||||
{
|
||||
MFEM_VERIFY(D1D == TestD1D,
|
||||
"Trial and test spaces must have same number of dofs");
|
||||
MFEM_VERIFY(D1D <= DeviceDofQuadLimits::Get().HDIV_MAX_D1D,
|
||||
"Error: D1D > HDIV_MAX_D1D");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().HDIV_MAX_Q1D,
|
||||
|
||||
@@ -66,58 +66,29 @@ void PAHdivMassAssembleDiagonal3D(const int D1D,
|
||||
const Vector &op_,
|
||||
Vector &diag_);
|
||||
|
||||
void PAHdivMassApply(const int dim,
|
||||
const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &Bo,
|
||||
const Array<real_t> &Bc,
|
||||
const Array<real_t> &Bot,
|
||||
const Array<real_t> &Bct,
|
||||
const Vector &op,
|
||||
const Vector &x,
|
||||
Vector &y);
|
||||
|
||||
// PA H(div) Mass Apply 2D kernel
|
||||
void PAHdivMassApply2D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_,
|
||||
const Array<real_t> &Bct_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_);
|
||||
void PAHdivMassApply2D(const int NE, const bool symmetric,
|
||||
const bool scalar_coeff, const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Bc_, const Array<real_t> &Bot_,
|
||||
const Array<real_t> &Bct_, const Vector &op_,
|
||||
const Vector &x_, Vector &y_, const int D1D,
|
||||
const int TestD1D, const int Q1D);
|
||||
|
||||
// PA H(div) Mass Apply 3D kernel
|
||||
void PAHdivMassApply3D(const int D1D,
|
||||
const int Q1D,
|
||||
const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_,
|
||||
const Array<real_t> &Bct_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_);
|
||||
void PAHdivMassApply3D(const int NE, const bool symmetric,
|
||||
const bool scalar_coeff, const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Bc_, const Array<real_t> &Bot_,
|
||||
const Array<real_t> &Bct_, const Vector &op_,
|
||||
const Vector &x_, Vector &y_, const int D1D,
|
||||
const int TestD1D, const int Q1D);
|
||||
|
||||
// Shared memory PA H(div) Mass Apply 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAHdivMassApply2D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_,
|
||||
const Array<real_t> &Bct_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
template <int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAHdivMassApply2D(
|
||||
const int NE, const bool symmetric, const bool, const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Bc_, const Array<real_t> &Bot_,
|
||||
const Array<real_t> &Bct_, const Vector &op_, const Vector &x_, Vector &y_,
|
||||
const int d1d = 0, const int = 0, const int q1d = 0)
|
||||
{
|
||||
MFEM_CONTRACT_VAR(Bot_);
|
||||
MFEM_CONTRACT_VAR(Bct_);
|
||||
@@ -280,18 +251,13 @@ inline void SmemPAHdivMassApply2D(const int NE,
|
||||
}
|
||||
|
||||
// Shared memory PA H(div) Mass Apply 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAHdivMassApply3D(const int NE,
|
||||
const bool symmetric,
|
||||
const Array<real_t> &Bo_,
|
||||
const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_,
|
||||
const Array<real_t> &Bct_,
|
||||
const Vector &op_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
template <int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void
|
||||
SmemPAHdivMassApply3D(const int NE, const bool symmetric, const bool,
|
||||
const Array<real_t> &Bo_, const Array<real_t> &Bc_,
|
||||
const Array<real_t> &Bot_, const Array<real_t> &Bct_,
|
||||
const Vector &op_, const Vector &x_, Vector &y_,
|
||||
const int d1d = 0, const int = 0, const int q1d = 0)
|
||||
{
|
||||
MFEM_CONTRACT_VAR(Bot_);
|
||||
MFEM_CONTRACT_VAR(Bct_);
|
||||
|
||||
+163
-982
File diff suppressed because it is too large
Load Diff
@@ -0,0 +1,365 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
#pragma once
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
#include "../../general/array.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/dtensor.hpp"
|
||||
#include "../../linalg/vector.hpp"
|
||||
#include "../bilininteg.hpp"
|
||||
#include "../kernels.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
|
||||
namespace internal
|
||||
{
|
||||
|
||||
// Shared memory PA Divergence Apply 2D kernel
|
||||
template<int T_TR_D1D = 0, int T_TE_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPADivergenceApply2D(const int NE,
|
||||
const Array<real_t> &b_,
|
||||
const Array<real_t> &g_,
|
||||
const Array<real_t> &bt_,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(TR_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(TE_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
|
||||
const auto B = b_.Read(), G = g_.Read(), Bt = bt_.Read();
|
||||
const auto Q = Reshape(q_.Read(), Q1D, Q1D, 2, 2, NE);
|
||||
const auto X = Reshape(x_.Read(), TR_D1D, TR_D1D, 2, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), TE_D1D, TE_D1D, 1, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MQ1][MQ1], sG[MQ1][MQ1];
|
||||
|
||||
kernels::internal::vd_regs2d_t<2, 2, MQ1> g0, g1;
|
||||
kernels::internal::v_regs2d_t<1, MQ1> r0, r1;
|
||||
|
||||
kernels::internal::LoadMatrix(TR_D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadMatrix(TR_D1D, Q1D, G, sG);
|
||||
|
||||
kernels::internal::LoadDofs2d(e, TR_D1D, X, g0);
|
||||
kernels::internal::Grad2d(TR_D1D, Q1D, smem, sB, sG, g0, g1);
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
r0[0][qy][qx] =
|
||||
g1[0][0][qy][qx] * Q(qx, qy, 0, 0, e) +
|
||||
g1[0][1][qy][qx] * Q(qx, qy, 1, 0, e) +
|
||||
g1[1][0][qy][qx] * Q(qx, qy, 0, 1, e) +
|
||||
g1[1][1][qy][qx] * Q(qx, qy, 1, 1, e);
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
kernels::internal::LoadMatrix<MQ1,true>(TE_D1D, Q1D, Bt, sB);
|
||||
kernels::internal::EvalTranspose2d(TE_D1D, Q1D, smem, sB, r0, r1);
|
||||
kernels::internal::WriteDofs2d(e, TE_D1D, r1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
// Shared memory PA Divergence Apply 2D kernel transpose
|
||||
template<int T_TR_D1D = 0, int T_TE_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPADivergenceApplyTranspose2D(const int NE,
|
||||
const Array<real_t> &bt,
|
||||
const Array<real_t> >,
|
||||
const Array<real_t> &b,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(TR_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(TE_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
|
||||
const auto Bt = bt.Read(), Gt = gt.Read(), B = b.Read();
|
||||
const auto Q = Reshape(q_.Read(), Q1D, Q1D, 2, 2, NE);
|
||||
const auto X = Reshape(x_.Read(), TE_D1D, TE_D1D, 1, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), TR_D1D, TR_D1D, 2, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MQ1][MQ1], sG[MQ1][MQ1];
|
||||
|
||||
kernels::internal::v_regs2d_t<1, MQ1> r0, r1;
|
||||
kernels::internal::vd_regs2d_t<2, 2, MQ1> g0, g1;
|
||||
|
||||
kernels::internal::LoadMatrix(TE_D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadDofs2d(e, TE_D1D, X, r0);
|
||||
kernels::internal::Eval2d(TE_D1D, Q1D, smem, sB, r0, r1);
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
g0[0][0][qy][qx] = r1[0][qy][qx] * Q(qx, qy, 0, 0, e);
|
||||
g0[0][1][qy][qx] = r1[0][qy][qx] * Q(qx, qy, 1, 0, e);
|
||||
g0[1][0][qy][qx] = r1[0][qy][qx] * Q(qx, qy, 0, 1, e);
|
||||
g0[1][1][qy][qx] = r1[0][qy][qx] * Q(qx, qy, 1, 1, e);
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
kernels::internal::LoadMatrix<MQ1,true>(TR_D1D, Q1D, Bt, sB);
|
||||
kernels::internal::LoadMatrix<MQ1,true>(TR_D1D, Q1D, Gt, sG);
|
||||
kernels::internal::GradTranspose2d(TR_D1D, Q1D, smem, sB, sG, g0, g1);
|
||||
kernels::internal::WriteDofs2d(e, TR_D1D, g1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
// Shared memory PA Divergence Apply 3D kernel transpose
|
||||
template<int T_TR_D1D = 0, int T_TE_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPADivergenceApplyTranspose3D(const int NE,
|
||||
const Array<real_t> &bt,
|
||||
const Array<real_t> >,
|
||||
const Array<real_t> &b,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
int tr_d1d = 0,
|
||||
int te_d1d = 0,
|
||||
int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(TR_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(TE_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
|
||||
const auto Bt = bt.Read(), Gt = gt.Read(), B = b.Read();
|
||||
const auto Q = Reshape(q_.Read(), Q1D, Q1D, Q1D, 3, 3, NE);
|
||||
const auto X = Reshape(x_.Read(), TE_D1D, TE_D1D, TE_D1D, 1, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), TR_D1D, TR_D1D, TR_D1D, 3, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MQ1][MQ1], sG[MQ1][MQ1];
|
||||
|
||||
kernels::internal::v_regs3d_t<1, MQ1> r0, r1;
|
||||
kernels::internal::vd_regs3d_t<3, 3, MQ1> g0, g1;
|
||||
|
||||
kernels::internal::LoadMatrix(TE_D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadDofs3d(e, TE_D1D, X, r0);
|
||||
kernels::internal::Eval3d(TE_D1D, Q1D, smem, sB, r0, r1);
|
||||
|
||||
for (int qz = 0; qz < Q1D; qz++)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
const auto r = r1[0][qz][qy][qx];
|
||||
g0[0][0][qz][qy][qx] = r * Q(qx, qy, qz, 0, 0, e);
|
||||
g0[0][1][qz][qy][qx] = r * Q(qx, qy, qz, 1, 0, e);
|
||||
g0[0][2][qz][qy][qx] = r * Q(qx, qy, qz, 2, 0, e);
|
||||
|
||||
g0[1][0][qz][qy][qx] = r * Q(qx, qy, qz, 0, 1, e);
|
||||
g0[1][1][qz][qy][qx] = r * Q(qx, qy, qz, 1, 1, e);
|
||||
g0[1][2][qz][qy][qx] = r * Q(qx, qy, qz, 2, 1, e);
|
||||
|
||||
g0[2][0][qz][qy][qx] = r * Q(qx, qy, qz, 0, 2, e);
|
||||
g0[2][1][qz][qy][qx] = r * Q(qx, qy, qz, 1, 2, e);
|
||||
g0[2][2][qz][qy][qx] = r * Q(qx, qy, qz, 2, 2, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
kernels::internal::LoadMatrix<MQ1,true>(TR_D1D, Q1D, Bt, sB);
|
||||
kernels::internal::LoadMatrix<MQ1,true>(TR_D1D, Q1D, Gt, sG);
|
||||
kernels::internal::GradTranspose3d(TR_D1D, Q1D, smem, sB, sG, g0, g1);
|
||||
kernels::internal::WriteDofs3d(e, TR_D1D, g1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
// Shared memory PA Divergence Apply 3D kernel
|
||||
template<int T_TR_D1D = 0, int T_TE_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPADivergenceApply3D(const int NE,
|
||||
const Array<real_t> &b_,
|
||||
const Array<real_t> &g_,
|
||||
const Array<real_t> &bt_,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int tr_d1d = 0,
|
||||
const int te_d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int TR_D1D = T_TR_D1D ? T_TR_D1D : tr_d1d;
|
||||
const int TE_D1D = T_TE_D1D ? T_TE_D1D : te_d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(TR_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(TE_D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
|
||||
const auto B = b_.Read(), G = g_.Read(), Bt = bt_.Read();
|
||||
const auto Q = Reshape(q_.Read(), Q1D, Q1D, Q1D, 3,3, NE);
|
||||
const auto X = Reshape(x_.Read(), TR_D1D, TR_D1D, TR_D1D, 3, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), TE_D1D, TE_D1D, TE_D1D, 1, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D*T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MQ1][MQ1], sG[MQ1][MQ1];
|
||||
|
||||
kernels::internal::vd_regs3d_t<3, 3, MQ1> g0, g1;
|
||||
kernels::internal::v_regs3d_t<1, MQ1> r0, r1;
|
||||
|
||||
kernels::internal::LoadMatrix(TR_D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadMatrix(TR_D1D, Q1D, G, sG);
|
||||
|
||||
kernels::internal::LoadDofs3d(e, TR_D1D, X, g0);
|
||||
kernels::internal::Grad3d(TR_D1D, Q1D, smem, sB, sG, g0, g1);
|
||||
|
||||
for (int qz = 0; qz < Q1D; qz++)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
r0[0][qz][qy][qx] =
|
||||
// c = 0
|
||||
g1[0][0][qz][qy][qx] * Q(qx, qy, qz, 0, 0, e) +
|
||||
g1[0][1][qz][qy][qx] * Q(qx, qy, qz, 1, 0, e) +
|
||||
g1[0][2][qz][qy][qx] * Q(qx, qy, qz, 2, 0, e) +
|
||||
// c = 1
|
||||
g1[1][0][qz][qy][qx] * Q(qx, qy, qz, 0, 1, e) +
|
||||
g1[1][1][qz][qy][qx] * Q(qx, qy, qz, 1, 1, e) +
|
||||
g1[1][2][qz][qy][qx] * Q(qx, qy, qz, 2, 1, e) +
|
||||
// c = 2
|
||||
g1[2][0][qz][qy][qx] * Q(qx, qy, qz, 0, 2, e) +
|
||||
g1[2][1][qz][qy][qx] * Q(qx, qy, qz, 1, 2, e) +
|
||||
g1[2][2][qz][qy][qx] * Q(qx, qy, qz, 2, 2, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
kernels::internal::LoadMatrix<MQ1, true>(TE_D1D, Q1D, Bt, sB);
|
||||
kernels::internal::EvalTranspose3d(TE_D1D, Q1D, smem, sB, r0, r1);
|
||||
kernels::internal::WriteDofs3d(e, TE_D1D, r1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
} // namespace internal
|
||||
|
||||
template<int DIM, int T_TR_D1D, int T_TE_D1D, int T_Q1D>
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultPAType
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultPA::Kernel()
|
||||
{
|
||||
static_assert(T_TR_D1D <= T_Q1D && T_TE_D1D <= T_Q1D);
|
||||
if constexpr (DIM == 2)
|
||||
{
|
||||
return internal::SmemPADivergenceApply2D<T_TR_D1D, T_TE_D1D, T_Q1D>;
|
||||
}
|
||||
else if constexpr (DIM == 3)
|
||||
{
|
||||
return internal::SmemPADivergenceApply3D<T_TR_D1D, T_TE_D1D, T_Q1D>;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
inline VectorDivergenceIntegrator::VectorDivergenceAddMultPAType
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultPA::Fallback
|
||||
(int dim, int tr_d1d, int te_d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(tr_d1d <= q1d && te_d1d <= q1d, "");
|
||||
MFEM_VERIFY(tr_d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(te_d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
if (dim == 2)
|
||||
{
|
||||
return internal::SmemPADivergenceApply2D;
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
return internal::SmemPADivergenceApply3D;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
template<int DIM, int T_TR_D1D, int T_TE_D1D, int T_Q1D>
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultTransposePAType
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultTransposePA::Kernel()
|
||||
{
|
||||
static_assert(T_TR_D1D <= T_Q1D && T_TE_D1D <= T_Q1D);
|
||||
if constexpr (DIM == 2)
|
||||
{
|
||||
return internal::SmemPADivergenceApplyTranspose2D<T_TR_D1D, T_TE_D1D, T_Q1D>;
|
||||
}
|
||||
else if constexpr (DIM == 3)
|
||||
{
|
||||
return internal::SmemPADivergenceApplyTranspose3D<T_TR_D1D, T_TE_D1D, T_Q1D>;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
inline VectorDivergenceIntegrator::VectorDivergenceAddMultTransposePAType
|
||||
VectorDivergenceIntegrator::VectorDivergenceAddMultTransposePA::Fallback
|
||||
(int dim, int tr_d1d, int te_d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(tr_d1d <= q1d && te_d1d <= q1d, "");
|
||||
MFEM_VERIFY(tr_d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(te_d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
if (dim == 2)
|
||||
{
|
||||
return internal::SmemPADivergenceApplyTranspose2D;
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
return internal::SmemPADivergenceApplyTranspose3D;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
} // namespace mfem
|
||||
@@ -205,157 +205,40 @@ void VectorMassIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
|
||||
}
|
||||
|
||||
template <const int T_D1D = 0, const int T_Q1D = 0>
|
||||
static void PAVectorMassAssembleDiagonal2D(const int NE,
|
||||
const Array<real_t> &b,
|
||||
const Vector &pa_data, Vector &diag,
|
||||
const int d1d = 0, const int q1d = 0)
|
||||
{
|
||||
constexpr int VDIM = 2;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
MFEM_VERIFY(D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
const auto B = Reshape(b.Read(), Q1D, D1D);
|
||||
const auto D = Reshape(pa_data.Read(), Q1D, Q1D, NE);
|
||||
auto Y = Reshape(diag.ReadWrite(), D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int max_D1D = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int max_Q1D = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
real_t temp[max_Q1D][max_D1D];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
temp[qx][dy] = 0.0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
temp[qx][dy] += B(qy, dy) * B(qy, dy) * D(qx, qy, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
real_t temp1 = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
temp1 += B(qx, dx) * B(qx, dx) * temp[qx][dy];
|
||||
}
|
||||
Y(dx, dy, 0, e) = temp1;
|
||||
Y(dx, dy, 1, e) = temp1;
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
template <const int T_D1D = 0, const int T_Q1D = 0>
|
||||
static void PAVectorMassAssembleDiagonal3D(const int NE,
|
||||
const Array<real_t> &B_,
|
||||
const Vector &pa_data, Vector &diag,
|
||||
const int d1d = 0, const int q1d = 0)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
MFEM_VERIFY(D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
const auto B = Reshape(B_.Read(), Q1D, D1D);
|
||||
MFEM_VERIFY(pa_data.Size() == Q1D * Q1D * Q1D * NE, "pa_data size error");
|
||||
const auto D = Reshape(pa_data.Read(), Q1D, Q1D, Q1D, NE);
|
||||
auto Y = Reshape(diag.ReadWrite(), D1D, D1D, D1D, VDIM, NE);
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
// the following variables are evaluated at compile time
|
||||
constexpr int max_D1D = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int max_Q1D = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
real_t temp[max_Q1D][max_Q1D][max_D1D];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
temp[qx][qy][dz] = 0.0;
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
temp[qx][qy][dz] +=
|
||||
B(qz, dz) * B(qz, dz) * D(qx, qy, qz, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
real_t temp2[max_Q1D][max_D1D][max_D1D];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
temp2[qx][dy][dz] = 0.0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
temp2[qx][dy][dz] +=
|
||||
B(qy, dy) * B(qy, dy) * temp[qx][qy][dz];
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
real_t temp3 = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
temp3 += B(qx, dx) * B(qx, dx) * temp2[qx][dy][dz];
|
||||
}
|
||||
Y(dx, dy, dz, 0, e) = temp3;
|
||||
Y(dx, dy, dz, 1, e) = temp3;
|
||||
Y(dx, dy, dz, 2, e) = temp3;
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
static void PAVectorMassAssembleDiagonal(const int dim, const int D1D,
|
||||
const int Q1D, const int NE,
|
||||
const Array<real_t> &B,
|
||||
const Vector &pa_data,
|
||||
Vector &diag)
|
||||
{
|
||||
if (dim == 2)
|
||||
{
|
||||
return PAVectorMassAssembleDiagonal2D(NE, B, pa_data, diag, D1D, Q1D);
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
return PAVectorMassAssembleDiagonal3D(NE, B, pa_data, diag, D1D, Q1D);
|
||||
}
|
||||
MFEM_ABORT("Dimension not implemented.");
|
||||
}
|
||||
|
||||
void VectorMassIntegrator::AssembleDiagonalPA(Vector &diag)
|
||||
{
|
||||
if (DeviceCanUseCeed()) { ceedOp->GetDiagonal(diag); }
|
||||
else
|
||||
{
|
||||
MFEM_VERIFY(coeff_vdim == 1, "coeff_vdim != 1");
|
||||
MFEM_VERIFY(!VQ && !MQ, "VQ and MQ not supported");
|
||||
PAVectorMassAssembleDiagonal(dim, dofs1D, quad1D, ne, maps->B, pa_data, diag);
|
||||
}
|
||||
if (DeviceCanUseCeed()) { return ceedOp->GetDiagonal(diag); }
|
||||
|
||||
MFEM_VERIFY(coeff_vdim == 1, "coeff_vdim != 1");
|
||||
MFEM_VERIFY(!VQ && !MQ, "VQ and MQ not supported");
|
||||
|
||||
// Add the VectorMassAssembleDiagonalPA specializations
|
||||
static const auto vector_mass_assemble_diagonal_kernel_specializations =
|
||||
( // 2D
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 2>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 3>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 4>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 5>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 6>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 7>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<2, 8>::Add(),
|
||||
// 3D
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 2>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 3>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 4>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 5>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 6>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 7>::Add(),
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Specialization<3, 8>::Add(),
|
||||
true);
|
||||
MFEM_CONTRACT_VAR(vector_mass_assemble_diagonal_kernel_specializations);
|
||||
|
||||
VectorMassAssembleDiagonalPA::Run(dim, quad1D, // templated arguments
|
||||
ne, dofs1D, quad1D,
|
||||
maps->B.Read(),
|
||||
pa_data.Read(),
|
||||
diag.ReadWrite());
|
||||
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
|
||||
@@ -176,8 +176,146 @@ void SmemPAVectorMassApply3D(const int NE,
|
||||
});
|
||||
}
|
||||
|
||||
template <int T_Q1D = 0, int T_MDQ = 16>
|
||||
static void SmemPAVectorMassAssembleDiagonal2D(const int ne,
|
||||
const int d1d,
|
||||
const int q1d,
|
||||
const real_t *b_r,
|
||||
const real_t *d_r,
|
||||
real_t *y_rw)
|
||||
{
|
||||
constexpr int VDIM = 2;
|
||||
|
||||
const int D1D = d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(Q1D <= T_MDQ && D1D <= Q1D, "");
|
||||
|
||||
const auto B = Reshape(b_r, Q1D, D1D);
|
||||
const auto D = Reshape(d_r, Q1D, Q1D, ne);
|
||||
auto Y = Reshape(y_rw, D1D, D1D, VDIM, ne);
|
||||
|
||||
mfem::forall_2D<T_Q1D*T_Q1D>(
|
||||
ne, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : T_MDQ;
|
||||
|
||||
MFEM_SHARED real_t sm[MQ1][MQ1];
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
u += B(qy, dy) * B(qy, dy) * D(qx, qy, e);
|
||||
}
|
||||
sm[qx][dy] = u;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dx, x, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
u += B(qx, dx) * B(qx, dx) * sm[qx][dy];
|
||||
}
|
||||
Y(dx, dy, 0, e) += u;
|
||||
Y(dx, dy, 1, e) += u;
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
// T_MDQ <= 10 so the Q1D^3 thread block stays within the 1024/block GPU limit
|
||||
template <int T_Q1D = 0, int T_MDQ = 10>
|
||||
static void SmemPAVectorMassAssembleDiagonal3D(const int ne,
|
||||
const int d1d,
|
||||
const int q1d,
|
||||
const real_t *b_r,
|
||||
const real_t *d_r,
|
||||
real_t *y_rw)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
|
||||
const int D1D = d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
MFEM_VERIFY(Q1D <= T_MDQ && D1D <= Q1D, "");
|
||||
|
||||
const auto B = Reshape(b_r, Q1D, D1D);
|
||||
const auto D = Reshape(d_r, Q1D, Q1D, Q1D, ne);
|
||||
auto Y = Reshape(y_rw, D1D, D1D, D1D, VDIM, ne);
|
||||
|
||||
mfem::forall_3D<T_Q1D*T_Q1D*T_Q1D>(
|
||||
ne, Q1D, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : T_MDQ;
|
||||
|
||||
MFEM_SHARED real_t sm[2][MQ1][MQ1][MQ1];
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
u += B(qz, dz) * B(qz, dz) * D(qx, qy, qz, e);
|
||||
}
|
||||
sm[0][dz][qy][qx] = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
u += B(qy, dy) * B(qy, dy) * sm[0][dz][qy][qx];
|
||||
}
|
||||
sm[1][dz][dy][qx] = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dx, x, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
u += B(qx, dx) * B(qx, dx) * sm[1][dz][dy][qx];
|
||||
}
|
||||
Y(dx, dy, dz, 0, e) += u;
|
||||
Y(dx, dy, dz, 1, e) += u;
|
||||
Y(dx, dy, dz, 2, e) += u;
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
} // namespace internal
|
||||
|
||||
// AddMultPA kernels
|
||||
template<int DIM, int T_D1D, int T_Q1D>
|
||||
VectorMassIntegrator::VectorMassAddMultPAType
|
||||
VectorMassIntegrator::VectorMassAddMultPA::Kernel()
|
||||
@@ -194,7 +332,7 @@ VectorMassIntegrator::VectorMassAddMultPA::Kernel()
|
||||
}
|
||||
|
||||
inline VectorMassIntegrator::VectorMassAddMultPAType
|
||||
VectorMassIntegrator::VectorMassAddMultPA::Fallback(int dim, int d1d, int q1d)
|
||||
VectorMassIntegrator::VectorMassAddMultPA::Fallback(int dim, int, int)
|
||||
{
|
||||
if (dim == 2)
|
||||
{
|
||||
@@ -204,7 +342,37 @@ VectorMassIntegrator::VectorMassAddMultPA::Fallback(int dim, int d1d, int q1d)
|
||||
{
|
||||
return internal::SmemPAVectorMassApply3D;
|
||||
}
|
||||
else { MFEM_ABORT("Unsupported kernel"); }
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
// DiagonalPA kernels
|
||||
template<int DIM, int T_Q1D>
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPAType
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Kernel()
|
||||
{
|
||||
if constexpr (DIM == 2)
|
||||
{
|
||||
return internal::SmemPAVectorMassAssembleDiagonal2D<T_Q1D>;
|
||||
}
|
||||
else if constexpr (DIM == 3)
|
||||
{
|
||||
return internal::SmemPAVectorMassAssembleDiagonal3D<T_Q1D>;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
inline VectorMassIntegrator::VectorMassAssembleDiagonalPAType
|
||||
VectorMassIntegrator::VectorMassAssembleDiagonalPA::Fallback(int dim, int)
|
||||
{
|
||||
if (dim == 2)
|
||||
{
|
||||
return internal::SmemPAVectorMassAssembleDiagonal2D;
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
return internal::SmemPAVectorMassAssembleDiagonal3D;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
@@ -0,0 +1,113 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#ifndef MFEM_BILININTEG_VECTORFEMASS_KERNELS_HPP
|
||||
#define MFEM_BILININTEG_VECTORFEMASS_KERNELS_HPP
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
#include "../bilininteg.hpp"
|
||||
|
||||
#include "bilininteg_diffusion_kernels.hpp"
|
||||
#include "bilininteg_hcurl_kernels.hpp"
|
||||
#include "bilininteg_hdiv_kernels.hpp"
|
||||
#include "bilininteg_hcurlhdiv_kernels.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
namespace internal
|
||||
{
|
||||
namespace hcurlmass
|
||||
{
|
||||
constexpr int NBZ3D(int d1d, int q1d)
|
||||
{
|
||||
if (d1d <= 1 || q1d <= 0)
|
||||
{
|
||||
return 1;
|
||||
}
|
||||
// assume q1d >= d1d
|
||||
// z dimension is capped at 64 on nvidia and amd gpus
|
||||
int tmp = std::min((128 + q1d * q1d * q1d - 1) / (q1d * q1d * q1d), 64);
|
||||
int smem_req =
|
||||
sizeof(mfem::real_t) *
|
||||
(3 * ((d1d - 1) * d1d * d1d + 2 * q1d * q1d * q1d) * tmp +
|
||||
q1d * (d1d - 1) + q1d * d1d);
|
||||
// assume GPU has at least 48k shared memory
|
||||
return std::max(std::min(tmp, (48 * 1024 + smem_req - 1) / smem_req), 1);
|
||||
}
|
||||
} // namespace hcurlmass
|
||||
} // namespace internal
|
||||
|
||||
template <FiniteElement::DerivType TrialType, FiniteElement::DerivType TestType,
|
||||
int DIM, int TrialD1D, int TestD1D, int Q1D>
|
||||
VectorFEMassIntegrator::ApplyKernelType
|
||||
VectorFEMassIntegrator::ApplyPAKernels::Kernel()
|
||||
{
|
||||
constexpr bool trial_curl = (TrialType == mfem::FiniteElement::CURL);
|
||||
constexpr bool trial_div = (TrialType == mfem::FiniteElement::DIV);
|
||||
constexpr bool test_curl = (TestType == mfem::FiniteElement::CURL);
|
||||
constexpr bool test_div = (TestType == mfem::FiniteElement::DIV);
|
||||
|
||||
if constexpr (DIM == 3)
|
||||
{
|
||||
if constexpr (trial_curl && test_curl)
|
||||
{
|
||||
if (Device::Allows(Backend::DEVICE_MASK))
|
||||
{
|
||||
// assume TrialD1D == TestD1D
|
||||
return internal::SmemPAHcurlMassApply3D<
|
||||
TrialD1D, Q1D, internal::hcurlmass::NBZ3D(TrialD1D, Q1D)>;
|
||||
}
|
||||
else
|
||||
{
|
||||
return internal::PAHcurlMassApply3D;
|
||||
}
|
||||
}
|
||||
else if constexpr (trial_div && test_div)
|
||||
{
|
||||
// assumes TrialD1D == TestD1D
|
||||
return internal::SmemPAHdivMassApply3D<TrialD1D, Q1D>;
|
||||
}
|
||||
else if constexpr (trial_curl && test_div)
|
||||
{
|
||||
return internal::PAHdivHcurlMassApply3D;
|
||||
}
|
||||
else if constexpr (trial_div && test_curl)
|
||||
{
|
||||
return internal::PAHcurlHdivMassApply3D;
|
||||
}
|
||||
}
|
||||
else if constexpr (DIM == 2) // 2D
|
||||
{
|
||||
if constexpr (trial_curl && test_curl)
|
||||
{
|
||||
return internal::PAHcurlMassApply2D;
|
||||
}
|
||||
else if constexpr (trial_div && test_div)
|
||||
{
|
||||
// assumes TrialD1D == TestD1D
|
||||
return internal::SmemPAHdivMassApply2D<TrialD1D, Q1D>;
|
||||
}
|
||||
else if constexpr (trial_curl && test_div)
|
||||
{
|
||||
return internal::PAHdivHcurlMassApply2D;
|
||||
}
|
||||
else if constexpr (trial_div && test_curl)
|
||||
{
|
||||
return internal::PAHcurlHdivMassApply2D;
|
||||
}
|
||||
}
|
||||
MFEM_ABORT("Unknown kernel.");
|
||||
}
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
}
|
||||
|
||||
#endif
|
||||
@@ -10,15 +10,123 @@
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "../bilininteg.hpp"
|
||||
#include "../gridfunc.hpp"
|
||||
#include "../qfunction.hpp"
|
||||
#include "bilininteg_diffusion_kernels.hpp"
|
||||
#include "bilininteg_hcurl_kernels.hpp"
|
||||
#include "bilininteg_hdiv_kernels.hpp"
|
||||
#include "bilininteg_hcurlhdiv_kernels.hpp"
|
||||
#include "bilininteg_vectorfemass_kernels.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
VectorFEMassIntegrator::ApplyKernelType
|
||||
VectorFEMassIntegrator::ApplyPAKernels::Fallback(
|
||||
FiniteElement::DerivType TrialType, FiniteElement::DerivType TestType,
|
||||
int dim, int, int, int)
|
||||
{
|
||||
const bool trial_curl = (TrialType == mfem::FiniteElement::CURL);
|
||||
const bool trial_div = (TrialType == mfem::FiniteElement::DIV);
|
||||
const bool test_curl = (TestType == mfem::FiniteElement::CURL);
|
||||
const bool test_div = (TestType == mfem::FiniteElement::DIV);
|
||||
|
||||
if (dim == 3)
|
||||
{
|
||||
if (trial_curl && test_curl)
|
||||
{
|
||||
return internal::PAHcurlMassApply3D;
|
||||
}
|
||||
else if (trial_div && test_div)
|
||||
{
|
||||
return internal::PAHdivMassApply3D;
|
||||
}
|
||||
else if (trial_curl && test_div)
|
||||
{
|
||||
return internal::PAHdivHcurlMassApply3D;
|
||||
}
|
||||
else if (trial_div && test_curl)
|
||||
{
|
||||
return internal::PAHcurlHdivMassApply3D;
|
||||
}
|
||||
}
|
||||
else if (dim == 2) // 2D
|
||||
{
|
||||
if (trial_curl && test_curl)
|
||||
{
|
||||
return internal::PAHcurlMassApply2D;
|
||||
}
|
||||
else if (trial_div && test_div)
|
||||
{
|
||||
return internal::PAHdivMassApply2D;
|
||||
}
|
||||
else if (trial_curl && test_div)
|
||||
{
|
||||
return internal::PAHdivHcurlMassApply2D;
|
||||
}
|
||||
else if (trial_div && test_curl)
|
||||
{
|
||||
return internal::PAHcurlHdivMassApply2D;
|
||||
}
|
||||
}
|
||||
MFEM_ABORT("Unknown kernel.");
|
||||
}
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
VectorFEMassIntegrator::Kernels::Kernels()
|
||||
{
|
||||
// h(curl), h(curl)
|
||||
// Q = P + 1 (3D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 2, 2, 3>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 3, 3, 4>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 4, 4, 5>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 5, 5, 6>();
|
||||
// Q = P + 2 (3D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 2, 2, 4>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 3, 3, 5>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 4, 4, 6>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 5, 5, 7>();
|
||||
// Q = P + 4 (3D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 2, 2, 6>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 3, 3, 7>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 4, 4, 8>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::CURL,
|
||||
FiniteElement::CURL, 3, 5, 5, 9>();
|
||||
// h(div), h(div)
|
||||
// Q = P (2D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 2, 2, 2, 2>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 2, 3, 3, 3>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 2, 4, 4, 4>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 2, 5, 5, 5>();
|
||||
|
||||
// Q = P + 1 (3D)
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 3, 2, 2, 3>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 3, 3, 3, 4>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 3, 4, 4, 5>();
|
||||
VectorFEMassIntegrator::AddSpecialization<FiniteElement::DIV,
|
||||
FiniteElement::DIV, 3, 5, 5, 6>();
|
||||
}
|
||||
|
||||
void VectorFEMassIntegrator::Init(Coefficient *q, DiagonalMatrixCoefficient *dq,
|
||||
MatrixCoefficient *mq)
|
||||
{
|
||||
static Kernels kernels{};
|
||||
Q = q;
|
||||
DQ = dq;
|
||||
MQ = mq;
|
||||
}
|
||||
|
||||
void VectorFEMassIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
{
|
||||
@@ -67,8 +175,8 @@ void VectorFEMassIntegrator::AssemblePA(const FiniteElementSpace &trial_fes,
|
||||
|
||||
MFEM_VERIFY(dofs1D == mapsO->ndof + 1 && quad1D == mapsO->nqpt, "");
|
||||
|
||||
trial_fetype = trial_el->GetDerivType();
|
||||
test_fetype = test_el->GetDerivType();
|
||||
trial_fetype = static_cast<FiniteElement::DerivType>(trial_el->GetDerivType());
|
||||
test_fetype = static_cast<FiniteElement::DerivType>(test_el->GetDerivType());
|
||||
|
||||
const bool trial_curl = (trial_fetype == mfem::FiniteElement::CURL);
|
||||
const bool trial_div = (trial_fetype == mfem::FiniteElement::DIV);
|
||||
@@ -215,225 +323,34 @@ void VectorFEMassIntegrator::AssembleDiagonalPA(Vector& diag)
|
||||
|
||||
void VectorFEMassIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
{
|
||||
const bool trial_curl = (trial_fetype == mfem::FiniteElement::CURL);
|
||||
const bool trial_div = (trial_fetype == mfem::FiniteElement::DIV);
|
||||
const bool test_curl = (test_fetype == mfem::FiniteElement::CURL);
|
||||
const bool test_div = (test_fetype == mfem::FiniteElement::DIV);
|
||||
|
||||
if (dim == 3)
|
||||
{
|
||||
if (trial_curl && test_curl)
|
||||
{
|
||||
if (Device::Allows(Backend::DEVICE_MASK))
|
||||
{
|
||||
const int ID = (dofs1D << 4) | quad1D;
|
||||
switch (ID)
|
||||
{
|
||||
case 0x23:
|
||||
return internal::SmemPAHcurlMassApply3D<2,3>(
|
||||
dofs1D, quad1D, ne, symmetric,
|
||||
mapsO->B, mapsC->B, mapsO->Bt,
|
||||
mapsC->Bt, pa_data, x, y);
|
||||
case 0x34:
|
||||
return internal::SmemPAHcurlMassApply3D<3,4>(
|
||||
dofs1D, quad1D, ne, symmetric,
|
||||
mapsO->B, mapsC->B, mapsO->Bt,
|
||||
mapsC->Bt, pa_data, x, y);
|
||||
case 0x45:
|
||||
return internal::SmemPAHcurlMassApply3D<4,5>(
|
||||
dofs1D, quad1D, ne, symmetric,
|
||||
mapsO->B, mapsC->B, mapsO->Bt,
|
||||
mapsC->Bt, pa_data, x, y);
|
||||
case 0x56:
|
||||
return internal::SmemPAHcurlMassApply3D<5,6>(
|
||||
dofs1D, quad1D, ne, symmetric,
|
||||
mapsO->B, mapsC->B, mapsO->Bt,
|
||||
mapsC->Bt, pa_data, x, y);
|
||||
default:
|
||||
return internal::SmemPAHcurlMassApply3D(
|
||||
dofs1D, quad1D, ne, symmetric,
|
||||
mapsO->B, mapsC->B, mapsO->Bt,
|
||||
mapsC->Bt, pa_data, x, y);
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
internal::PAHcurlMassApply3D(dofs1D, quad1D, ne, symmetric, mapsO->B, mapsC->B,
|
||||
mapsO->Bt, mapsC->Bt, pa_data, x, y);
|
||||
}
|
||||
}
|
||||
else if (trial_div && test_div)
|
||||
{
|
||||
internal::PAHdivMassApply(3, dofs1D, quad1D, ne, symmetric, mapsO->B, mapsC->B,
|
||||
mapsO->Bt, mapsC->Bt, pa_data, x, y);
|
||||
}
|
||||
else if (trial_curl && test_div)
|
||||
{
|
||||
const bool scalarCoeff = !(DQ || MQ);
|
||||
internal::PAHcurlHdivMassApply3D(dofs1D, dofs1Dtest, quad1D, ne, scalarCoeff,
|
||||
true, false, mapsO->B, mapsC->B, mapsOtest->Bt,
|
||||
mapsCtest->Bt, pa_data, x, y);
|
||||
}
|
||||
else if (trial_div && test_curl)
|
||||
{
|
||||
const bool scalarCoeff = !(DQ || MQ);
|
||||
internal::PAHcurlHdivMassApply3D(dofs1D, dofs1Dtest, quad1D, ne, scalarCoeff,
|
||||
false, false, mapsO->B, mapsC->B, mapsOtest->Bt,
|
||||
mapsCtest->Bt, pa_data, x, y);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unknown kernel.");
|
||||
}
|
||||
}
|
||||
else // 2D
|
||||
{
|
||||
if (trial_curl && test_curl)
|
||||
{
|
||||
internal::PAHcurlMassApply2D(dofs1D, quad1D, ne, symmetric, mapsO->B, mapsC->B,
|
||||
mapsO->Bt, mapsC->Bt, pa_data, x, y);
|
||||
}
|
||||
else if (trial_div && test_div)
|
||||
{
|
||||
internal::PAHdivMassApply(2, dofs1D, quad1D, ne, symmetric, mapsO->B, mapsC->B,
|
||||
mapsO->Bt,
|
||||
mapsC->Bt, pa_data, x, y);
|
||||
}
|
||||
else if ((trial_curl && test_div) || (trial_div && test_curl))
|
||||
{
|
||||
const bool scalarCoeff = !(DQ || MQ);
|
||||
internal::PAHcurlHdivMassApply2D(dofs1D, dofs1Dtest, quad1D, ne, scalarCoeff,
|
||||
trial_curl, false, mapsO->B, mapsC->B,
|
||||
mapsOtest->Bt, mapsCtest->Bt, pa_data, x, y);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unknown kernel.");
|
||||
}
|
||||
}
|
||||
const bool scalar_coeff = !(DQ || MQ);
|
||||
ApplyPAKernels::Run(trial_fetype, test_fetype, dim, dofs1D, dofs1Dtest,
|
||||
quad1D, ne, symmetric, scalar_coeff, mapsO->B, mapsC->B,
|
||||
mapsOtest->Bt, mapsCtest->Bt, pa_data, x, y, dofs1D,
|
||||
dofs1Dtest, quad1D);
|
||||
}
|
||||
|
||||
void VectorFEMassIntegrator::AddAbsMultPA(const Vector &x, Vector &y) const
|
||||
{
|
||||
const bool trial_curl = (trial_fetype == mfem::FiniteElement::CURL);
|
||||
const bool trial_div = (trial_fetype == mfem::FiniteElement::DIV);
|
||||
const bool test_curl = (test_fetype == mfem::FiniteElement::CURL);
|
||||
const bool test_div = (test_fetype == mfem::FiniteElement::DIV);
|
||||
const bool scalar_coeff = !(DQ || MQ);
|
||||
|
||||
Vector abs_pa_data(pa_data);
|
||||
abs_pa_data.Abs();
|
||||
|
||||
Array<real_t> absBo(mapsO->B);
|
||||
Array<real_t> absBc(mapsC->B);
|
||||
Array<real_t> absBto(mapsO->Bt);
|
||||
Array<real_t> absBtc(mapsC->Bt);
|
||||
Array<real_t> absBto_t(mapsOtest->Bt);
|
||||
Array<real_t> absBtc_t(mapsCtest->Bt);
|
||||
|
||||
absBo.Abs();
|
||||
absBc.Abs();
|
||||
absBto.Abs();
|
||||
absBtc.Abs();
|
||||
absBto_t.Abs();
|
||||
absBtc_t.Abs();
|
||||
|
||||
if (dim == 3)
|
||||
{
|
||||
if (trial_curl && test_curl)
|
||||
{
|
||||
if (Device::Allows(Backend::DEVICE_MASK))
|
||||
{
|
||||
const int ID = (dofs1D << 4) | quad1D;
|
||||
switch (ID)
|
||||
{
|
||||
case 0x23:
|
||||
return internal::SmemPAHcurlMassApply3D<2,3>(
|
||||
dofs1D, quad1D, ne, symmetric,
|
||||
absBo, absBc, absBto, absBtc,
|
||||
abs_pa_data, x, y);
|
||||
case 0x34:
|
||||
return internal::SmemPAHcurlMassApply3D<3,4>(
|
||||
dofs1D, quad1D, ne, symmetric,
|
||||
absBo, absBc, absBto, absBtc,
|
||||
abs_pa_data, x, y);
|
||||
case 0x45:
|
||||
return internal::SmemPAHcurlMassApply3D<4,5>(
|
||||
dofs1D, quad1D, ne, symmetric,
|
||||
absBo, absBc, absBto, absBtc,
|
||||
abs_pa_data, x, y);
|
||||
case 0x56:
|
||||
return internal::SmemPAHcurlMassApply3D<5,6>(
|
||||
dofs1D, quad1D, ne, symmetric,
|
||||
absBo, absBc, absBto, absBtc,
|
||||
abs_pa_data, x, y);
|
||||
default:
|
||||
return internal::SmemPAHcurlMassApply3D(
|
||||
dofs1D, quad1D, ne, symmetric,
|
||||
absBo, absBc, absBto, absBtc,
|
||||
abs_pa_data, x, y);
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
internal::PAHcurlMassApply3D(dofs1D, quad1D, ne, symmetric,
|
||||
absBo, absBc, absBto, absBtc,
|
||||
abs_pa_data, x, y);
|
||||
}
|
||||
}
|
||||
else if (trial_div && test_div)
|
||||
{
|
||||
internal::PAHdivMassApply(3, dofs1D, quad1D, ne, symmetric,
|
||||
absBo, absBc, absBto, absBtc,
|
||||
abs_pa_data, x, y);
|
||||
}
|
||||
else if (trial_curl && test_div)
|
||||
{
|
||||
const bool scalarCoeff = !(DQ || MQ);
|
||||
internal::PAHcurlHdivMassApply3D(dofs1D, dofs1Dtest, quad1D, ne,
|
||||
scalarCoeff, true, false,
|
||||
absBo, absBc, absBto_t, absBtc_t,
|
||||
abs_pa_data, x, y);
|
||||
}
|
||||
else if (trial_div && test_curl)
|
||||
{
|
||||
const bool scalarCoeff = !(DQ || MQ);
|
||||
internal::PAHcurlHdivMassApply3D(dofs1D, dofs1Dtest, quad1D, ne,
|
||||
scalarCoeff, false, false,
|
||||
absBo, absBc, absBto_t, absBtc_t,
|
||||
abs_pa_data, x, y);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unknown kernel.");
|
||||
}
|
||||
}
|
||||
else // 2D
|
||||
{
|
||||
if (trial_curl && test_curl)
|
||||
{
|
||||
internal::PAHcurlMassApply2D(dofs1D, quad1D, ne, symmetric,
|
||||
absBo, absBc, absBto, absBtc,
|
||||
abs_pa_data, x, y);
|
||||
}
|
||||
else if (trial_div && test_div)
|
||||
{
|
||||
internal::PAHdivMassApply(2, dofs1D, quad1D, ne, symmetric,
|
||||
absBo, absBc, absBto, absBtc,
|
||||
abs_pa_data, x, y);
|
||||
}
|
||||
else if ((trial_curl && test_div) || (trial_div && test_curl))
|
||||
{
|
||||
const bool scalarCoeff = !(DQ || MQ);
|
||||
internal::PAHcurlHdivMassApply2D(dofs1D, dofs1Dtest, quad1D, ne,
|
||||
scalarCoeff, trial_curl, false,
|
||||
absBo, absBc, absBto_t, absBtc_t,
|
||||
abs_pa_data, x, y);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unknown kernel.");
|
||||
}
|
||||
}
|
||||
ApplyPAKernels::Run(trial_fetype, test_fetype, dim, dofs1D, dofs1Dtest,
|
||||
quad1D, ne, symmetric, scalar_coeff, absBo, absBc,
|
||||
absBto_t, absBtc_t, abs_pa_data, x, y, dofs1D,
|
||||
dofs1Dtest, quad1D);
|
||||
}
|
||||
|
||||
void VectorFEMassIntegrator::AddMultTransposePA(const Vector &x,
|
||||
|
||||
@@ -9,21 +9,51 @@
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../nonlininteg.hpp"
|
||||
#include "../ceed/integrators/nlconvection/nlconvection.hpp"
|
||||
#include "./nonlininteg_vecconvection_pa.hpp" // IWYU pragma: keep
|
||||
#include "./nonlininteg_vecconvection_pa_grad.hpp" // IWYU pragma: keep
|
||||
#include "./nonlininteg_vecconvection_pa_diag.hpp" // IWYU pragma: keep
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
VectorConvectionNLFIntegrator::Kernels::Kernels()
|
||||
{
|
||||
// 2D
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 2, 2>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 2, 3>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 3, 4>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 3, 5>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 4, 5>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 4, 6>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 5, 7>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 5, 8>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<2, 6, 8>();
|
||||
// 3D
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 2, 3>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 2, 4>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 2, 5>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 3, 4>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 3, 5>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 3, 6>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 4, 5>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 4, 6>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 4, 7>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 4, 8>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 5, 6>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 5, 7>();
|
||||
VectorConvectionNLFIntegrator::AddSpecialization<3, 5, 8>();
|
||||
}
|
||||
|
||||
void VectorConvectionNLFIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
{
|
||||
MFEM_ASSERT(fes.GetOrdering() == Ordering::byNODES,
|
||||
"PA Only supports Ordering::byNODES!");
|
||||
Mesh *mesh = fes.GetMesh();
|
||||
const FiniteElement &el = *fes.GetTypicalFE();
|
||||
ElementTransformation &T = *mesh->GetTypicalElementTransformation();
|
||||
const IntegrationRule *ir = IntRule ? IntRule : &GetRule(el, T);
|
||||
ElementTransformation &Tr = *mesh->GetTypicalElementTransformation();
|
||||
const IntegrationRule *ir = IntRule ? IntRule : &GetRule(el, Tr);
|
||||
|
||||
if (DeviceCanUseCeed())
|
||||
{
|
||||
delete ceedOp;
|
||||
@@ -39,769 +69,124 @@ void VectorConvectionNLFIntegrator::AssemblePA(const FiniteElementSpace &fes)
|
||||
}
|
||||
return;
|
||||
}
|
||||
dim = mesh->Dimension();
|
||||
ne = fes.GetMesh()->GetNE();
|
||||
|
||||
ne = mesh->GetNE();
|
||||
nq = ir->GetNPoints();
|
||||
geom = mesh->GetGeometricFactors(*ir, GeometricFactors::JACOBIANS);
|
||||
dim = mesh->Dimension();
|
||||
MFEM_VERIFY(dim == 2 || dim == 3, "Dimension not supported");
|
||||
|
||||
const MemoryType mt = pa_mt == MemoryType::DEFAULT
|
||||
? Device::GetDeviceMemoryType()
|
||||
: pa_mt;
|
||||
pa_adj.SetSize(ne * nq * dim * dim, mt);
|
||||
geom = mesh->GetGeometricFactors(*ir, GeometricFactors::JACOBIANS, mt);
|
||||
maps = &el.GetDofToQuad(*ir, DofToQuad::TENSOR);
|
||||
pa_data.SetSize(ne * nq * dim * dim, Device::GetMemoryType());
|
||||
real_t COEFF = 1.0;
|
||||
if (Q)
|
||||
{
|
||||
ConstantCoefficient *cQ = dynamic_cast<ConstantCoefficient *>(Q);
|
||||
MFEM_VERIFY(cQ != NULL, "only ConstantCoefficient is supported!");
|
||||
COEFF = cQ->constant;
|
||||
}
|
||||
const int NE = ne;
|
||||
const int NQ = nq;
|
||||
auto W = ir->GetWeights().Read();
|
||||
if (dim == 1)
|
||||
{
|
||||
MFEM_ABORT("dim==1 not supported!");
|
||||
}
|
||||
d1d = maps->ndof;
|
||||
q1d = maps->nqpt;
|
||||
|
||||
QuadratureSpace qs(*mesh, *ir);
|
||||
CoefficientVector coeff(Q, qs, CoefficientStorage::COMPRESSED);
|
||||
|
||||
const int nq1d = q1d * q1d * (dim==3 ? q1d : 1);
|
||||
MFEM_VERIFY(coeff.Size() == 1 || coeff.Size() == nq1d*ne, "Invalid coeff");
|
||||
MFEM_VERIFY(ir->GetWeights().Size() == nq1d, "Invalid weights size");
|
||||
|
||||
const auto w_r = ir->GetWeights().Read();
|
||||
const bool const_coeff = coeff.Size() == 1;
|
||||
|
||||
if (dim == 2)
|
||||
{
|
||||
auto J = Reshape(geom->J.Read(), NQ, 2, 2, NE);
|
||||
auto G = Reshape(pa_data.Write(), NQ, 2, 2, NE);
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
const int Q1D = q1d;
|
||||
constexpr int VDIM = 2, DIM = 2;
|
||||
const auto W = Reshape(w_r, Q1D, Q1D);
|
||||
const auto C = const_coeff ?
|
||||
Reshape(coeff.Read(), 1, 1, 1) :
|
||||
Reshape(coeff.Read(), Q1D, Q1D, ne);
|
||||
const auto J = Reshape(geom->J.Read(), Q1D, Q1D, VDIM, DIM, ne);
|
||||
auto A = Reshape(pa_adj.Write(), VDIM, DIM, Q1D, Q1D, ne);
|
||||
|
||||
mfem::forall_2D(ne, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
for (int q = 0; q < NQ; ++q)
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
const real_t J11 = J(q, 0, 0, e);
|
||||
const real_t J12 = J(q, 0, 1, e);
|
||||
const real_t J21 = J(q, 1, 0, e);
|
||||
const real_t J22 = J(q, 1, 1, e);
|
||||
// Store wq * Q * adj(J)
|
||||
G(q, 0, 0, e) = W[q] * COEFF * J22; // 1,1
|
||||
G(q, 0, 1, e) = W[q] * COEFF * -J12; // 1,2
|
||||
G(q, 1, 0, e) = W[q] * COEFF * -J21; // 2,1
|
||||
G(q, 1, 1, e) = W[q] * COEFF * J11; // 2,2
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
const real_t J11 = J(qx, qy, 0, 0, e), J12 = J(qx, qy, 0, 1, e);
|
||||
const real_t J21 = J(qx, qy, 1, 0, e), J22 = J(qx, qy, 1, 1, e);
|
||||
// adj(J)
|
||||
const real_t A11 = +J22, A12 = -J12;
|
||||
const real_t A21 = -J21, A22 = +J11;
|
||||
// Store w * coeff * adj(J)
|
||||
const real_t w = W(qx, qy);
|
||||
const real_t c = const_coeff ? C(0, 0, 0) : C(qx, qy, e);
|
||||
A(0, 0, qx, qy, e) = w * c * A11;
|
||||
A(1, 0, qx, qy, e) = w * c * A12;
|
||||
A(0, 1, qx, qy, e) = w * c * A21;
|
||||
A(1, 1, qx, qy, e) = w * c * A22;
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
if (dim == 3)
|
||||
else if (dim == 3)
|
||||
{
|
||||
auto J = Reshape(geom->J.Read(), NQ, 3, 3, NE);
|
||||
auto G = Reshape(pa_data.Write(), NQ, 3, 3, NE);
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
const int Q1D = q1d;
|
||||
constexpr int VDIM = 3, DIM = 3;
|
||||
const auto W = Reshape(w_r, Q1D, Q1D, Q1D);
|
||||
const auto C = const_coeff ?
|
||||
Reshape(coeff.Read(), 1, 1, 1, 1) :
|
||||
Reshape(coeff.Read(), Q1D, Q1D, Q1D, ne);
|
||||
const auto J = Reshape(geom->J.Read(), Q1D, Q1D, Q1D, VDIM, DIM, ne);
|
||||
auto A = Reshape(pa_adj.Write(), VDIM, DIM, Q1D, Q1D, Q1D, ne);
|
||||
|
||||
mfem::forall_3D(ne, Q1D, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
for (int q = 0; q < NQ; ++q)
|
||||
MFEM_FOREACH_THREAD_DIRECT(qz, z, Q1D)
|
||||
{
|
||||
const real_t J11 = J(q, 0, 0, e);
|
||||
const real_t J21 = J(q, 1, 0, e);
|
||||
const real_t J31 = J(q, 2, 0, e);
|
||||
const real_t J12 = J(q, 0, 1, e);
|
||||
const real_t J22 = J(q, 1, 1, e);
|
||||
const real_t J32 = J(q, 2, 1, e);
|
||||
const real_t J13 = J(q, 0, 2, e);
|
||||
const real_t J23 = J(q, 1, 2, e);
|
||||
const real_t J33 = J(q, 2, 2, e);
|
||||
const real_t cw = W[q] * COEFF;
|
||||
// adj(J)
|
||||
const real_t A11 = (J22 * J33) - (J23 * J32);
|
||||
const real_t A12 = (J32 * J13) - (J12 * J33);
|
||||
const real_t A13 = (J12 * J23) - (J22 * J13);
|
||||
const real_t A21 = (J31 * J23) - (J21 * J33);
|
||||
const real_t A22 = (J11 * J33) - (J13 * J31);
|
||||
const real_t A23 = (J21 * J13) - (J11 * J23);
|
||||
const real_t A31 = (J21 * J32) - (J31 * J22);
|
||||
const real_t A32 = (J31 * J12) - (J11 * J32);
|
||||
const real_t A33 = (J11 * J22) - (J12 * J21);
|
||||
// Store wq * Q * adj(J)
|
||||
G(q, 0, 0, e) = cw * A11; // 1,1
|
||||
G(q, 0, 1, e) = cw * A12; // 1,2
|
||||
G(q, 0, 2, e) = cw * A13; // 1,3
|
||||
G(q, 1, 0, e) = cw * A21; // 2,1
|
||||
G(q, 1, 1, e) = cw * A22; // 2,2
|
||||
G(q, 1, 2, e) = cw * A23; // 2,3
|
||||
G(q, 2, 0, e) = cw * A31; // 3,1
|
||||
G(q, 2, 1, e) = cw * A32; // 3,2
|
||||
G(q, 2, 2, e) = cw * A33; // 3,3
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
const real_t J11 = J(qx, qy, qz, 0, 0, e),
|
||||
J12 = J(qx, qy, qz, 0, 1, e),
|
||||
J13 = J(qx, qy, qz, 0, 2, e);
|
||||
const real_t J21 = J(qx, qy, qz, 1, 0, e),
|
||||
J22 = J(qx, qy, qz, 1, 1, e),
|
||||
J23 = J(qx, qy, qz, 1, 2, e);
|
||||
const real_t J31 = J(qx, qy, qz, 2, 0, e),
|
||||
J32 = J(qx, qy, qz, 2, 1, e),
|
||||
J33 = J(qx, qy, qz, 2, 2, e);
|
||||
const real_t c =
|
||||
const_coeff ? C(0, 0, 0, 0) : C(qx, qy, qz, e);
|
||||
const real_t cw = W(qx, qy, qz) * c;
|
||||
// adj(J)
|
||||
const real_t A11 = (J22 * J33) - (J23 * J32);
|
||||
const real_t A12 = (J32 * J13) - (J12 * J33);
|
||||
const real_t A13 = (J12 * J23) - (J22 * J13);
|
||||
const real_t A21 = (J31 * J23) - (J21 * J33);
|
||||
const real_t A22 = (J11 * J33) - (J13 * J31);
|
||||
const real_t A23 = (J21 * J13) - (J11 * J23);
|
||||
const real_t A31 = (J21 * J32) - (J31 * J22);
|
||||
const real_t A32 = (J31 * J12) - (J11 * J32);
|
||||
const real_t A33 = (J11 * J22) - (J12 * J21);
|
||||
// Store wq * coeff * adj(J)
|
||||
A(0, 0, qx, qy, qz, e) = cw * A11;
|
||||
A(1, 0, qx, qy, qz, e) = cw * A12;
|
||||
A(2, 0, qx, qy, qz, e) = cw * A13;
|
||||
A(0, 1, qx, qy, qz, e) = cw * A21;
|
||||
A(1, 1, qx, qy, qz, e) = cw * A22;
|
||||
A(2, 1, qx, qy, qz, e) = cw * A23;
|
||||
A(0, 2, qx, qy, qz, e) = cw * A31;
|
||||
A(1, 2, qx, qy, qz, e) = cw * A32;
|
||||
A(2, 2, qx, qy, qz, e) = cw * A33;
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
}
|
||||
|
||||
// PA Convection NL 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAConvectionNLApply2D(const int NE,
|
||||
const Array<real_t> &b,
|
||||
const Array<real_t> &g,
|
||||
const Array<real_t> &bt,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
MFEM_VERIFY(D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
auto B = Reshape(b.Read(), Q1D, D1D);
|
||||
auto G = Reshape(g.Read(), Q1D, D1D);
|
||||
auto Bt = Reshape(bt.Read(), D1D, Q1D);
|
||||
auto Q = Reshape(q_.Read(), Q1D * Q1D, 2, 2, NE);
|
||||
auto x = Reshape(x_.Read(), D1D, D1D, 2, NE);
|
||||
auto y = Reshape(y_.ReadWrite(), D1D, D1D, 2, NE);
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
else
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int max_D1D = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int max_Q1D = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
real_t data[max_Q1D][max_Q1D][2];
|
||||
real_t grad0[max_Q1D][max_Q1D][2];
|
||||
real_t grad1[max_Q1D][max_Q1D][2];
|
||||
real_t Z[max_Q1D][max_Q1D][2];
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
data[qy][qx][0] = 0.0;
|
||||
data[qy][qx][1] = 0.0;
|
||||
grad0[qy][qx][0] = 0.0;
|
||||
grad0[qy][qx][1] = 0.0;
|
||||
grad1[qy][qx][0] = 0.0;
|
||||
grad1[qy][qx][1] = 0.0;
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
real_t dataX[max_Q1D][2];
|
||||
real_t gradX0[max_Q1D][2];
|
||||
real_t gradX1[max_Q1D][2];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
dataX[qx][0] = 0.0;
|
||||
dataX[qx][1] = 0.0;
|
||||
gradX0[qx][0] = 0.0;
|
||||
gradX0[qx][1] = 0.0;
|
||||
gradX1[qx][0] = 0.0;
|
||||
gradX1[qx][1] = 0.0;
|
||||
}
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t s0 = x(dx, dy, 0, e);
|
||||
const real_t s1 = x(dx, dy, 1, e);
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Bx = B(qx, dx);
|
||||
const real_t Gx = G(qx, dx);
|
||||
dataX[qx][0] += s0 * Bx;
|
||||
dataX[qx][1] += s1 * Bx;
|
||||
gradX0[qx][0] += s0 * Gx;
|
||||
gradX0[qx][1] += s0 * Bx;
|
||||
gradX1[qx][0] += s1 * Gx;
|
||||
gradX1[qx][1] += s1 * Bx;
|
||||
}
|
||||
}
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
const real_t By = B(qy, dy);
|
||||
const real_t Gy = G(qy, dy);
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
data[qy][qx][0] += dataX[qx][0] * By;
|
||||
data[qy][qx][1] += dataX[qx][1] * By;
|
||||
grad0[qy][qx][0] += gradX0[qx][0] * By;
|
||||
grad0[qy][qx][1] += gradX0[qx][1] * Gy;
|
||||
grad1[qy][qx][0] += gradX1[qx][0] * By;
|
||||
grad1[qy][qx][1] += gradX1[qx][1] * Gy;
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const int q = qx + qy * Q1D;
|
||||
const real_t u1 = data[qy][qx][0];
|
||||
const real_t u2 = data[qy][qx][1];
|
||||
const real_t grad00 = grad0[qy][qx][0];
|
||||
const real_t grad01 = grad0[qy][qx][1];
|
||||
const real_t grad10 = grad1[qy][qx][0];
|
||||
const real_t grad11 = grad1[qy][qx][1];
|
||||
const real_t Dxu1 = grad00 * Q(q, 0, 0, e) + grad01 * Q(q, 1, 0, e);
|
||||
const real_t Dyu1 = grad00 * Q(q, 0, 1, e) + grad01 * Q(q, 1, 1, e);
|
||||
const real_t Dxu2 = grad10 * Q(q, 0, 0, e) + grad11 * Q(q, 1, 0, e);
|
||||
const real_t Dyu2 = grad10 * Q(q, 0, 1, e) + grad11 * Q(q, 1, 1, e);
|
||||
Z[qy][qx][0] = u1 * Dxu1 + u2 * Dyu1;
|
||||
Z[qy][qx][1] = u1 * Dxu2 + u2 * Dyu2;
|
||||
}
|
||||
}
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
real_t Y[max_D1D][2];
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
Y[dx][0] = 0.0;
|
||||
Y[dx][1] = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Btx = Bt(dx, qx);
|
||||
Y[dx][0] += Btx * Z[qy][qx][0];
|
||||
Y[dx][1] += Btx * Z[qy][qx][1];
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t Bty = Bt(dy, qy);
|
||||
y(dx, dy, 0, e) += Bty * Y[dx][0];
|
||||
y(dx, dy, 1, e) += Bty * Y[dx][1];
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
// PA Convection NL 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
static void PAConvectionNLApply3D(const int NE,
|
||||
const Array<real_t> &b,
|
||||
const Array<real_t> &g,
|
||||
const Array<real_t> &bt,
|
||||
const Vector &q_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
MFEM_VERIFY(D1D <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(Q1D <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
|
||||
auto B = Reshape(b.Read(), Q1D, D1D);
|
||||
auto G = Reshape(g.Read(), Q1D, D1D);
|
||||
auto Bt = Reshape(bt.Read(), D1D, Q1D);
|
||||
auto Q = Reshape(q_.Read(), Q1D * Q1D * Q1D, VDIM, VDIM, NE);
|
||||
auto x = Reshape(x_.Read(), D1D, D1D, D1D, VDIM, NE);
|
||||
auto y = Reshape(y_.ReadWrite(), D1D, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int max_D1D = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int max_Q1D = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
real_t data[max_Q1D][max_Q1D][max_Q1D][VDIM];
|
||||
real_t grad0[max_Q1D][max_Q1D][max_Q1D][VDIM];
|
||||
real_t grad1[max_Q1D][max_Q1D][max_Q1D][VDIM];
|
||||
real_t grad2[max_Q1D][max_Q1D][max_Q1D][VDIM];
|
||||
real_t Z[max_Q1D][max_Q1D][max_Q1D][VDIM];
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
data[qz][qy][qx][0] = 0.0;
|
||||
data[qz][qy][qx][1] = 0.0;
|
||||
data[qz][qy][qx][2] = 0.0;
|
||||
|
||||
grad0[qz][qy][qx][0] = 0.0;
|
||||
grad0[qz][qy][qx][1] = 0.0;
|
||||
grad0[qz][qy][qx][2] = 0.0;
|
||||
|
||||
grad1[qz][qy][qx][0] = 0.0;
|
||||
grad1[qz][qy][qx][1] = 0.0;
|
||||
grad1[qz][qy][qx][2] = 0.0;
|
||||
|
||||
grad2[qz][qy][qx][0] = 0.0;
|
||||
grad2[qz][qy][qx][1] = 0.0;
|
||||
grad2[qz][qy][qx][2] = 0.0;
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
real_t dataXY[max_Q1D][max_Q1D][VDIM];
|
||||
real_t gradXY0[max_Q1D][max_Q1D][VDIM];
|
||||
real_t gradXY1[max_Q1D][max_Q1D][VDIM];
|
||||
real_t gradXY2[max_Q1D][max_Q1D][VDIM];
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
dataXY[qy][qx][0] = 0.0;
|
||||
dataXY[qy][qx][1] = 0.0;
|
||||
dataXY[qy][qx][2] = 0.0;
|
||||
|
||||
gradXY0[qy][qx][0] = 0.0;
|
||||
gradXY0[qy][qx][1] = 0.0;
|
||||
gradXY0[qy][qx][2] = 0.0;
|
||||
|
||||
gradXY1[qy][qx][0] = 0.0;
|
||||
gradXY1[qy][qx][1] = 0.0;
|
||||
gradXY1[qy][qx][2] = 0.0;
|
||||
|
||||
gradXY2[qy][qx][0] = 0.0;
|
||||
gradXY2[qy][qx][1] = 0.0;
|
||||
gradXY2[qy][qx][2] = 0.0;
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
real_t dataX[max_Q1D][VDIM];
|
||||
real_t gradX0[max_Q1D][VDIM];
|
||||
real_t gradX1[max_Q1D][VDIM];
|
||||
real_t gradX2[max_Q1D][VDIM];
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
dataX[qx][0] = 0.0;
|
||||
dataX[qx][1] = 0.0;
|
||||
dataX[qx][2] = 0.0;
|
||||
|
||||
gradX0[qx][0] = 0.0;
|
||||
gradX0[qx][1] = 0.0;
|
||||
gradX0[qx][2] = 0.0;
|
||||
|
||||
gradX1[qx][0] = 0.0;
|
||||
gradX1[qx][1] = 0.0;
|
||||
gradX1[qx][2] = 0.0;
|
||||
|
||||
gradX2[qx][0] = 0.0;
|
||||
gradX2[qx][1] = 0.0;
|
||||
gradX2[qx][2] = 0.0;
|
||||
}
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t s0 = x(dx, dy, dz, 0, e);
|
||||
const real_t s1 = x(dx, dy, dz, 1, e);
|
||||
const real_t s2 = x(dx, dy, dz, 2, e);
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Bx = B(qx, dx);
|
||||
const real_t Gx = G(qx, dx);
|
||||
|
||||
dataX[qx][0] += s0 * Bx;
|
||||
dataX[qx][1] += s1 * Bx;
|
||||
dataX[qx][2] += s2 * Bx;
|
||||
|
||||
gradX0[qx][0] += s0 * Gx;
|
||||
gradX0[qx][1] += s0 * Bx;
|
||||
gradX0[qx][2] += s0 * Bx;
|
||||
|
||||
gradX1[qx][0] += s1 * Gx;
|
||||
gradX1[qx][1] += s1 * Bx;
|
||||
gradX1[qx][2] += s1 * Bx;
|
||||
|
||||
gradX2[qx][0] += s2 * Gx;
|
||||
gradX2[qx][1] += s2 * Bx;
|
||||
gradX2[qx][2] += s2 * Bx;
|
||||
}
|
||||
}
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
const real_t By = B(qy, dy);
|
||||
const real_t Gy = G(qy, dy);
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
dataXY[qy][qx][0] += dataX[qx][0] * By;
|
||||
dataXY[qy][qx][1] += dataX[qx][1] * By;
|
||||
dataXY[qy][qx][2] += dataX[qx][2] * By;
|
||||
|
||||
gradXY0[qy][qx][0] += gradX0[qx][0] * By;
|
||||
gradXY0[qy][qx][1] += gradX0[qx][1] * Gy;
|
||||
gradXY0[qy][qx][2] += gradX0[qx][2] * By;
|
||||
|
||||
gradXY1[qy][qx][0] += gradX1[qx][0] * By;
|
||||
gradXY1[qy][qx][1] += gradX1[qx][1] * Gy;
|
||||
gradXY1[qy][qx][2] += gradX1[qx][2] * By;
|
||||
|
||||
gradXY2[qy][qx][0] += gradX2[qx][0] * By;
|
||||
gradXY2[qy][qx][1] += gradX2[qx][1] * Gy;
|
||||
gradXY2[qy][qx][2] += gradX2[qx][2] * By;
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
const real_t Bz = B(qz, dz);
|
||||
const real_t Gz = G(qz, dz);
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
data[qz][qy][qx][0] += dataXY[qy][qx][0] * Bz;
|
||||
data[qz][qy][qx][1] += dataXY[qy][qx][1] * Bz;
|
||||
data[qz][qy][qx][2] += dataXY[qy][qx][2] * Bz;
|
||||
|
||||
grad0[qz][qy][qx][0] += gradXY0[qy][qx][0] * Bz;
|
||||
grad0[qz][qy][qx][1] += gradXY0[qy][qx][1] * Bz;
|
||||
grad0[qz][qy][qx][2] += gradXY0[qy][qx][2] * Gz;
|
||||
|
||||
grad1[qz][qy][qx][0] += gradXY1[qy][qx][0] * Bz;
|
||||
grad1[qz][qy][qx][1] += gradXY1[qy][qx][1] * Bz;
|
||||
grad1[qz][qy][qx][2] += gradXY1[qy][qx][2] * Gz;
|
||||
|
||||
grad2[qz][qy][qx][0] += gradXY2[qy][qx][0] * Bz;
|
||||
grad2[qz][qy][qx][1] += gradXY2[qy][qx][1] * Bz;
|
||||
grad2[qz][qy][qx][2] += gradXY2[qy][qx][2] * Gz;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const int q = qx + Q1D * (qy + qz * Q1D);
|
||||
|
||||
const real_t u1 = data[qz][qy][qx][0];
|
||||
const real_t u2 = data[qz][qy][qx][1];
|
||||
const real_t u3 = data[qz][qy][qx][2];
|
||||
|
||||
const real_t grad00 = grad0[qz][qy][qx][0];
|
||||
const real_t grad01 = grad0[qz][qy][qx][1];
|
||||
const real_t grad02 = grad0[qz][qy][qx][2];
|
||||
|
||||
const real_t grad10 = grad1[qz][qy][qx][0];
|
||||
const real_t grad11 = grad1[qz][qy][qx][1];
|
||||
const real_t grad12 = grad1[qz][qy][qx][2];
|
||||
|
||||
const real_t grad20 = grad2[qz][qy][qx][0];
|
||||
const real_t grad21 = grad2[qz][qy][qx][1];
|
||||
const real_t grad22 = grad2[qz][qy][qx][2];
|
||||
|
||||
const real_t Dxu1 = grad00 * Q(q, 0, 0, e)
|
||||
+ grad01 * Q(q, 1, 0, e)
|
||||
+ grad02 * Q(q, 2, 0, e);
|
||||
const real_t Dyu1 = grad00 * Q(q, 0, 1, e)
|
||||
+ grad01 * Q(q, 1, 1, e)
|
||||
+ grad02 * Q(q, 2, 1, e);
|
||||
const real_t Dzu1 = grad00 * Q(q, 0, 2, e)
|
||||
+ grad01 * Q(q, 1, 2, e)
|
||||
+ grad02 * Q(q, 2, 2, e);
|
||||
|
||||
const real_t Dxu2 = grad10 * Q(q, 0, 0, e)
|
||||
+ grad11 * Q(q, 1, 0, e)
|
||||
+ grad12 * Q(q, 2, 0, e);
|
||||
const real_t Dyu2 = grad10 * Q(q, 0, 1, e)
|
||||
+ grad11 * Q(q, 1, 1, e)
|
||||
+ grad12 * Q(q, 2, 1, e);
|
||||
const real_t Dzu2 = grad10 * Q(q, 0, 2, e)
|
||||
+ grad11 * Q(q, 1, 2, e)
|
||||
+ grad12 * Q(q, 2, 2, e);
|
||||
|
||||
const real_t Dxu3 = grad20 * Q(q, 0, 0, e)
|
||||
+ grad21 * Q(q, 1, 0, e)
|
||||
+ grad22 * Q(q, 2, 0, e);
|
||||
const real_t Dyu3 = grad20 * Q(q, 0, 1, e)
|
||||
+ grad21 * Q(q, 1, 1, e)
|
||||
+ grad22 * Q(q, 2, 1, e);
|
||||
const real_t Dzu3 = grad20 * Q(q, 0, 2, e)
|
||||
+ grad21 * Q(q, 1, 2, e)
|
||||
+ grad22 * Q(q, 2, 2, e);
|
||||
|
||||
Z[qz][qy][qx][0] = u1 * Dxu1 + u2 * Dyu1 + u3 * Dzu1;
|
||||
Z[qz][qy][qx][1] = u1 * Dxu2 + u2 * Dyu2 + u3 * Dzu2;
|
||||
Z[qz][qy][qx][2] = u1 * Dxu3 + u2 * Dyu3 + u3 * Dzu3;
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
real_t opXY[max_D1D][max_D1D][VDIM];
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
opXY[dy][dx][0] = 0.0;
|
||||
opXY[dy][dx][1] = 0.0;
|
||||
opXY[dy][dx][2] = 0.0;
|
||||
}
|
||||
}
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
real_t opX[max_D1D][VDIM];
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
opX[dx][0] = 0.0;
|
||||
opX[dx][1] = 0.0;
|
||||
opX[dx][2] = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Btx = Bt(dx, qx);
|
||||
opX[dx][0] += Btx * Z[qz][qy][qx][0];
|
||||
opX[dx][1] += Btx * Z[qz][qy][qx][1];
|
||||
opX[dx][2] += Btx * Z[qz][qy][qx][2];
|
||||
}
|
||||
}
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t Bty = Bt(dy, qy);
|
||||
opXY[dy][dx][0] += Bty * opX[dx][0];
|
||||
opXY[dy][dx][1] += Bty * opX[dx][1];
|
||||
opXY[dy][dx][2] += Bty * opX[dx][2];
|
||||
}
|
||||
}
|
||||
}
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t Btz = Bt(dz, qz);
|
||||
y(dx, dy, dz, 0, e) += Btz * opXY[dy][dx][0];
|
||||
y(dx, dy, dz, 1, e) += Btz * opXY[dy][dx][1];
|
||||
y(dx, dy, dz, 2, e) += Btz * opXY[dy][dx][2];
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0, int T_MAX_D1D = 0, int T_MAX_Q1D = 0>
|
||||
static void SmemPAConvectionNLApply3D(const int NE,
|
||||
const Array<real_t> &b_,
|
||||
const Array<real_t> &g_,
|
||||
const Vector &d_,
|
||||
const Vector &x_,
|
||||
Vector &y_,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
constexpr int VDIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int MD1 = T_D1D ? T_D1D : T_MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : T_MAX_Q1D;
|
||||
MFEM_VERIFY(D1D <= MD1, "");
|
||||
MFEM_VERIFY(Q1D <= MQ1, "");
|
||||
|
||||
auto b = Reshape(b_.Read(), Q1D, D1D);
|
||||
auto g = Reshape(g_.Read(), Q1D, D1D);
|
||||
auto D = Reshape(d_.Read(), Q1D * Q1D * Q1D, VDIM, VDIM, NE);
|
||||
auto x = Reshape(x_.Read(), D1D, D1D, D1D, VDIM, NE);
|
||||
auto Y = Reshape(y_.ReadWrite(), D1D, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall_3D(NE, Q1D, Q1D, Q1D, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
const int tidz = MFEM_THREAD_ID(z);
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
constexpr int MD1 = T_D1D ? T_D1D : T_MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : T_MAX_Q1D;
|
||||
MFEM_SHARED real_t BG[2][MQ1 * MD1];
|
||||
real_t(*B)[MD1] = (real_t(*)[MD1])(BG + 0);
|
||||
real_t(*G)[MD1] = (real_t(*)[MD1])(BG + 1);
|
||||
real_t(*Bt)[MQ1] = (real_t(*)[MQ1])(BG + 0);
|
||||
MFEM_SHARED real_t U[2][MQ1][MQ1][MQ1];
|
||||
MFEM_SHARED real_t sm0[3][MQ1 * MQ1 * MQ1];
|
||||
MFEM_SHARED real_t sm1[3][MQ1 * MQ1 * MQ1];
|
||||
real_t(*DDQ0)[MD1][MQ1] = (real_t(*)[MD1][MQ1])(sm0 + 0);
|
||||
real_t(*DDQ1)[MD1][MQ1] = (real_t(*)[MD1][MQ1])(sm0 + 1);
|
||||
real_t(*X)[MD1][MD1] = (real_t(*)[MD1][MD1])(sm0 + 2);
|
||||
real_t(*DQQ0)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm1 + 0);
|
||||
real_t(*DQQ1)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm1 + 1);
|
||||
real_t(*DQQ2)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm1 + 2);
|
||||
real_t(*QQQ0)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm0 + 0);
|
||||
real_t(*QQQ1)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm0 + 1);
|
||||
real_t(*QQQ2)[MQ1][MQ1] = (real_t(*)[MQ1][MQ1])(sm0 + 2);
|
||||
real_t(*QQD0)[MQ1][MD1] = (real_t(*)[MQ1][MD1])(sm1 + 0);
|
||||
real_t(*QDD0)[MD1][MD1] = (real_t(*)[MD1][MD1])(sm0 + 0);
|
||||
MFEM_SHARED real_t Z[MQ1][MQ1][MQ1];
|
||||
|
||||
for (int cy = 0; cy < VDIM; ++cy)
|
||||
{
|
||||
if (tidz == 0)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(q, x, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(d, y, D1D)
|
||||
{
|
||||
B[q][d] = b(q, d);
|
||||
G[q][d] = g(q, d);
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_FOREACH_THREAD(qz, z, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, Q1D) { Z[qz][qy][qx] = 0.0; }
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
for (int c = 0; c < VDIM; ++c)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx, x, D1D)
|
||||
{
|
||||
X[dz][dy][dx] = x(dx, dy, dz, cy, e);
|
||||
U[0][dz][dy][dx] = x(dx, dy, dz, c, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, Q1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
real_t v = 0.0;
|
||||
real_t z = 0.0;
|
||||
for (int dx = 0; dx < D1D; ++dx)
|
||||
{
|
||||
const real_t coord = X[dz][dy][dx];
|
||||
const real_t value = U[0][dz][dy][dx];
|
||||
u += coord * B[qx][dx];
|
||||
v += coord * G[qx][dx];
|
||||
z += value * B[qx][dx];
|
||||
}
|
||||
DDQ0[dz][dy][qx] = u;
|
||||
DDQ1[dz][dy][qx] = v;
|
||||
U[1][dz][dy][qx] = z;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, Q1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
real_t v = 0.0;
|
||||
real_t w = 0.0;
|
||||
real_t z = 0.0;
|
||||
for (int dy = 0; dy < D1D; ++dy)
|
||||
{
|
||||
u += DDQ1[dz][dy][qx] * B[qy][dy];
|
||||
v += DDQ0[dz][dy][qx] * G[qy][dy];
|
||||
w += DDQ0[dz][dy][qx] * B[qy][dy];
|
||||
z += U[1][dz][dy][qx] * B[qy][dy];
|
||||
}
|
||||
DQQ0[dz][qy][qx] = u;
|
||||
DQQ1[dz][qy][qx] = v;
|
||||
DQQ2[dz][qy][qx] = w;
|
||||
U[0][dz][qy][qx] = z;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(qz, z, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, Q1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
real_t v = 0.0;
|
||||
real_t w = 0.0;
|
||||
real_t z = 0.0;
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
u += DQQ0[dz][qy][qx] * B[qz][dz];
|
||||
v += DQQ1[dz][qy][qx] * B[qz][dz];
|
||||
w += DQQ2[dz][qy][qx] * G[qz][dz];
|
||||
z += U[0][dz][qy][qx] * B[qz][dz];
|
||||
}
|
||||
QQQ0[qz][qy][qx] = u;
|
||||
QQQ1[qz][qy][qx] = v;
|
||||
QQQ2[qz][qy][qx] = w;
|
||||
U[1][qz][qy][qx] = z;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(qz, z, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx, x, Q1D)
|
||||
{
|
||||
const int q = qx + (qy + qz * Q1D) * Q1D;
|
||||
const real_t z = U[1][qz][qy][qx];
|
||||
const real_t gX = QQQ0[qz][qy][qx];
|
||||
const real_t gY = QQQ1[qz][qy][qx];
|
||||
const real_t gZ = QQQ2[qz][qy][qx];
|
||||
const real_t d = gX * D(q, 0, c, e) + gY * D(q, 1, c, e)
|
||||
+ gZ * D(q, 2, c, e);
|
||||
Z[qz][qy][qx] += z * d;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
} // for each conv component
|
||||
if (tidz == 0)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(d, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(q, x, Q1D) { Bt[d][q] = b(q, d); }
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(qz, z, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx, x, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
u += Z[qz][qy][qx] * Bt[dx][qx];
|
||||
}
|
||||
QQD0[qz][qy][dx] = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(qz, z, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx, x, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
u += QQD0[qz][qy][dx] * Bt[dy][qy];
|
||||
}
|
||||
QDD0[qz][dy][dx] = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
MFEM_FOREACH_THREAD(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx, x, D1D)
|
||||
{
|
||||
real_t u = 0.0;
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
u += QDD0[qz][dy][dx] * Bt[dz][qz];
|
||||
}
|
||||
Y(dx, dy, dz, cy, e) += u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
}
|
||||
});
|
||||
MFEM_ABORT("dim " << dim << " not supported!");
|
||||
}
|
||||
}
|
||||
|
||||
void VectorConvectionNLFIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
@@ -812,26 +197,13 @@ void VectorConvectionNLFIntegrator::AddMultPA(const Vector &x, Vector &y) const
|
||||
}
|
||||
else
|
||||
{
|
||||
const int NE = ne;
|
||||
const int D1D = maps->ndof;
|
||||
const int Q1D = maps->nqpt;
|
||||
const Vector &QV = pa_data;
|
||||
const Array<real_t> &B = maps->B;
|
||||
const Array<real_t> &G = maps->G;
|
||||
const Array<real_t> &Bt = maps->Bt;
|
||||
if (dim == 2)
|
||||
{
|
||||
return PAConvectionNLApply2D(NE, B, G, Bt, QV, x, y, D1D, Q1D);
|
||||
}
|
||||
if (dim == 3)
|
||||
{
|
||||
constexpr int T_MAX_D1D = 8;
|
||||
constexpr int T_MAX_Q1D = 8;
|
||||
MFEM_VERIFY(D1D <= T_MAX_D1D && Q1D <= T_MAX_Q1D, "Not yet implemented!");
|
||||
return SmemPAConvectionNLApply3D<0, 0, T_MAX_D1D, T_MAX_Q1D>
|
||||
(NE, B, G, QV, x, y, D1D, Q1D);
|
||||
}
|
||||
MFEM_ABORT("Not yet implemented!");
|
||||
AddMultPAKernels::Run(dim, d1d, q1d, ne,
|
||||
maps->B.Read(),
|
||||
maps->G.Read(),
|
||||
pa_adj.Read(),
|
||||
x.Read(),
|
||||
y.ReadWrite(),
|
||||
d1d, q1d);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
@@ -0,0 +1,209 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
#pragma once
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/dtensor.hpp"
|
||||
#include "../kernels.hpp"
|
||||
#include "../nonlininteg.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
|
||||
namespace internal
|
||||
{
|
||||
|
||||
// PA Convection NL 2D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLApply2D(const int NE,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *x,
|
||||
real_t *y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
static constexpr int VDIM = 2, DIM = 2;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto B = Reshape(b, Q1D, D1D);
|
||||
const auto G = Reshape(g, Q1D, D1D);
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, NE);
|
||||
const auto X = Reshape(x, D1D, D1D, VDIM, NE);
|
||||
auto Y = Reshape(y, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1], sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::vd_regs2d_t<VDIM, DIM, MQ1> g0, g1;
|
||||
kernels::internal::v_regs2d_t<VDIM, MQ1> r0, r1;
|
||||
kernels::internal::v_regs2d_t<VDIM, MQ1> s0, s1;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, G, sG);
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, X, r0);
|
||||
kernels::internal::Eval2d(D1D, Q1D, smem, sB, r0, r1); // u vector-value
|
||||
kernels::internal::LoadDofs2d(e, D1D, X, g0);
|
||||
kernels::internal::Grad2d(D1D, Q1D, smem, sB, sG, g0, g1); // u vector-gradient
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
const future::tensor<real_t, 2> U =
|
||||
{
|
||||
r1[0][qy][qx], r1[1][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, 2,2> gradU = {{
|
||||
{g1[0][0][qy][qx], g1[1][0][qy][qx]},
|
||||
{g1[0][1][qy][qx], g1[1][1][qy][qx]},
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, 2,2> Q = {{
|
||||
{A(0,0,qx,qy,e), A(1,0,qx,qy,e)},
|
||||
{A(0,1,qx,qy,e), A(1,1,qx,qy,e)},
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, 2> conv = transpose(gradU) * (Q * U);
|
||||
s0[0][qy][qx] = conv[0];
|
||||
s0[1][qy][qx] = conv[1];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
kernels::internal::EvalTranspose2d(D1D, Q1D, smem, sB, s0, s1);
|
||||
kernels::internal::WriteDofs2d(e, D1D, s1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
// PA Convection NL 3D kernel
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLApply3D(const int NE,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *x,
|
||||
real_t *y,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
static constexpr int VDIM = 3, DIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto B = Reshape(b, Q1D, D1D);
|
||||
const auto G = Reshape(g, Q1D, D1D);
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, Q1D, NE);
|
||||
const auto X = Reshape(x, D1D, D1D, D1D, VDIM, NE);
|
||||
auto Y = Reshape(y, D1D, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D*T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1], sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::vd_regs3d_t<VDIM, DIM, MQ1> g0, g1;
|
||||
kernels::internal::v_regs3d_t<VDIM, MQ1> r0, r1;
|
||||
kernels::internal::v_regs3d_t<VDIM, MQ1> s0, s1;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, B, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, G, sG);
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, X, r0);
|
||||
kernels::internal::Eval3d(D1D, Q1D, smem, sB, r0, r1); // u vector-value
|
||||
kernels::internal::LoadDofs3d(e, D1D, X, g0);
|
||||
kernels::internal::Grad3d(D1D, Q1D, smem, sB, sG, g0, g1); // u vector-gradient
|
||||
|
||||
for (int qz = 0; qz < Q1D; qz++)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
const future::tensor<real_t, 3> U =
|
||||
{
|
||||
r1[0][qz][qy][qx], r1[1][qz][qy][qx], r1[2][qz][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, 3,3> gradU = {{
|
||||
{g1[0][0][qz][qy][qx], g1[1][0][qz][qy][qx], g1[2][0][qz][qy][qx]},
|
||||
{g1[0][1][qz][qy][qx], g1[1][1][qz][qy][qx], g1[2][1][qz][qy][qx]},
|
||||
{g1[0][2][qz][qy][qx], g1[1][2][qz][qy][qx], g1[2][2][qz][qy][qx]}
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, 3,3> Q = {{
|
||||
{A(0,0,qx,qy,qz,e), A(1,0,qx,qy,qz,e), A(2,0,qx,qy,qz,e)},
|
||||
{A(0,1,qx,qy,qz,e), A(1,1,qx,qy,qz,e), A(2,1,qx,qy,qz,e)},
|
||||
{A(0,2,qx,qy,qz,e), A(1,2,qx,qy,qz,e), A(2,2,qx,qy,qz,e)}
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, 3> conv = transpose(gradU) * (Q * U);
|
||||
s0[0][qz][qy][qx] = conv[0];
|
||||
s0[1][qz][qy][qx] = conv[1];
|
||||
s0[2][qz][qy][qx] = conv[2];
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
kernels::internal::EvalTranspose3d(D1D, Q1D, smem, sB, s0, s1);
|
||||
kernels::internal::WriteDofs3d(e, D1D, s1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
} // namespace internal
|
||||
|
||||
template<int DIM, int T_D1D, int T_Q1D>
|
||||
VectorConvectionNLFIntegrator::AddMultPAType
|
||||
VectorConvectionNLFIntegrator::AddMultPAKernels::Kernel()
|
||||
{
|
||||
static_assert(T_D1D <= T_Q1D, "d1d > q1d is not supported");
|
||||
if constexpr (DIM == 2)
|
||||
{
|
||||
return internal::SmemPAConvectionNLApply2D<T_D1D, T_Q1D>;
|
||||
}
|
||||
else if constexpr (DIM == 3)
|
||||
{
|
||||
return internal::SmemPAConvectionNLApply3D<T_D1D, T_Q1D>;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
inline VectorConvectionNLFIntegrator::AddMultPAType
|
||||
VectorConvectionNLFIntegrator::AddMultPAKernels::Fallback
|
||||
(int dim, int d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= q1d, "d1d > q1d is not supported");
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
if (dim == 2)
|
||||
{
|
||||
return internal::SmemPAConvectionNLApply2D<>;
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
return internal::SmemPAConvectionNLApply3D<>;
|
||||
}
|
||||
MFEM_ABORT("Unsupported kernel");
|
||||
}
|
||||
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
} // namespace mfem
|
||||
@@ -0,0 +1,50 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "../ceed/interface/util.hpp"
|
||||
#include "./nonlininteg_vecconvection_pa_diag.hpp" // IWYU pragma: keep
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
void VectorConvectionNLFIntegrator::AssembleGradDiagonalPA(Vector &de) const
|
||||
{
|
||||
MFEM_VERIFY(!DeviceCanUseCeed(),
|
||||
"VectorConvectionNLFIntegrator PA gradients are not supported "
|
||||
"with the libCEED backend");
|
||||
|
||||
if (dim == 2)
|
||||
{
|
||||
GradDiagPA2D::Run(d1d, q1d, ne,
|
||||
maps->B.Read(),
|
||||
maps->G.Read(),
|
||||
pa_adj.Read(),
|
||||
pa_u.Read(),
|
||||
de.ReadWrite(),
|
||||
d1d, q1d);
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
GradDiagPA3D::Run(d1d, q1d, ne,
|
||||
maps->B.Read(),
|
||||
maps->G.Read(),
|
||||
pa_adj.Read(),
|
||||
pa_u.Read(),
|
||||
de.ReadWrite(),
|
||||
d1d, q1d);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unsupported dimension");
|
||||
}
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
@@ -0,0 +1,302 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
#pragma once
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/dtensor.hpp"
|
||||
#include "../kernels.hpp"
|
||||
#include "../nonlininteg.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
|
||||
namespace internal
|
||||
{
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLGradDiagonal2D(const int NE,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *u,
|
||||
real_t *de,
|
||||
const int d1d,
|
||||
const int q1d)
|
||||
{
|
||||
static constexpr int VDIM = 2, DIM = 2;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, NE);
|
||||
const auto U = Reshape(u, D1D, D1D, VDIM, NE);
|
||||
auto D = Reshape(de, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t sM[3][MQ1][MQ1], sQ[3][MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::v_regs2d_t<VDIM, MQ1> r0, r1;
|
||||
kernels::internal::vd_regs2d_t<VDIM, DIM, MQ1> g0, g1;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, b, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, g, sG);
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, U, r0);
|
||||
kernels::internal::Eval2d(D1D, Q1D, sM[0], sB, r0, r1);
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, U, g0);
|
||||
kernels::internal::Grad2d(D1D, Q1D, sM[0], sB, sG, g0, g1);
|
||||
|
||||
for (int v = 0; v < VDIM; ++v)
|
||||
{
|
||||
future::tensor<real_t, VDIM> e_v = {};
|
||||
e_v[v] = real_t(1);
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
const future::tensor<real_t, VDIM> u_val =
|
||||
{
|
||||
r1[0][qy][qx], r1[1][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> Q_adj =
|
||||
{
|
||||
{ { A(0, 0, qx, qy, e), A(1, 0, qx, qy, e) },
|
||||
{ A(0, 1, qx, qy, e), A(1, 1, qx, qy, e) }
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> grad_U =
|
||||
{
|
||||
{ { g1[0][0][qy][qx], g1[1][0][qy][qx] },
|
||||
{ g1[0][1][qy][qx], g1[1][1][qy][qx] }
|
||||
}
|
||||
};
|
||||
const auto one = Q_adj * u_val;
|
||||
const auto two = transpose(grad_U) * (Q_adj * e_v);
|
||||
sQ[0][qx][qy] = one[0];
|
||||
sQ[1][qx][qy] = one[1];
|
||||
sQ[2][qx][qy] = two[v];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
real_t s[3] = {};
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
const real_t By = sB[dy][qy], Gy = sG[dy][qy];
|
||||
s[0] += By * By * sQ[0][qx][qy];
|
||||
s[1] += Gy * By * sQ[1][qx][qy];
|
||||
s[2] += By * By * sQ[2][qx][qy];
|
||||
}
|
||||
sM[0][qx][dy] = s[0];
|
||||
sM[1][qx][dy] = s[1];
|
||||
sM[2][qx][dy] = s[2];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dx, x, D1D)
|
||||
{
|
||||
real_t d = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Bx = sB[dx][qx], Gx = sG[dx][qx];
|
||||
d += Gx * Bx * sM[0][qx][dy] +
|
||||
Bx * Bx * sM[1][qx][dy] +
|
||||
Bx * Bx * sM[2][qx][dy];
|
||||
}
|
||||
D(dx, dy, v, e) += d;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLGradDiagonal3D(const int NE,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *u,
|
||||
real_t *de,
|
||||
const int d1d,
|
||||
const int q1d)
|
||||
{
|
||||
static constexpr int VDIM = 3, DIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, Q1D, NE);
|
||||
const auto U = Reshape(u, D1D, D1D, D1D, VDIM, NE);
|
||||
auto D = Reshape(de, D1D, D1D, D1D, VDIM, NE);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(NE, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t sM[4][MQ1][MQ1], sQ[4][MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::v_regs3d_t<VDIM, MQ1> r0, r1;
|
||||
kernels::internal::vd_regs3d_t<VDIM, DIM, MQ1> g0, g1;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, b, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, g, sG);
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, U, r0);
|
||||
kernels::internal::Eval3d(D1D, Q1D, sM[0], sB, r0, r1);
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, U, g0);
|
||||
kernels::internal::Grad3d(D1D, Q1D, sM[0], sB, sG, g0, g1);
|
||||
|
||||
for (int v = 0; v < VDIM; ++v)
|
||||
{
|
||||
future::tensor<real_t, VDIM> e_v = {};
|
||||
e_v[v] = real_t(1);
|
||||
for (int dz = 0; dz < D1D; ++dz)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
real_t s[4] = {};
|
||||
for (int qz = 0; qz < Q1D; ++qz)
|
||||
{
|
||||
const future::tensor<real_t, VDIM> u_val =
|
||||
{
|
||||
r1[0][qz][qy][qx], r1[1][qz][qy][qx], r1[2][qz][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> Q_adj = {{
|
||||
{A(0,0,qx,qy,qz,e), A(1,0,qx,qy,qz,e), A(2,0,qx,qy,qz,e)},
|
||||
{A(0,1,qx,qy,qz,e), A(1,1,qx,qy,qz,e), A(2,1,qx,qy,qz,e)},
|
||||
{A(0,2,qx,qy,qz,e), A(1,2,qx,qy,qz,e), A(2,2,qx,qy,qz,e)}
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> grad_U = {{
|
||||
{g1[0][0][qz][qy][qx], g1[1][0][qz][qy][qx], g1[2][0][qz][qy][qx]},
|
||||
{g1[0][1][qz][qy][qx], g1[1][1][qz][qy][qx], g1[2][1][qz][qy][qx]},
|
||||
{g1[0][2][qz][qy][qx], g1[1][2][qz][qy][qx], g1[2][2][qz][qy][qx]}
|
||||
}
|
||||
};
|
||||
const auto one = Q_adj * u_val;
|
||||
const auto two = transpose(grad_U) * (Q_adj * e_v);
|
||||
|
||||
const real_t Bz = sB[dz][qz], Gz = sG[dz][qz];
|
||||
s[0] += one[0] * Bz * Bz;
|
||||
s[1] += one[1] * Bz * Bz;
|
||||
s[2] += one[2] * Bz * Gz;
|
||||
s[3] += two[v] * Bz * Bz;
|
||||
}
|
||||
sQ[0][qx][qy] = s[0];
|
||||
sQ[1][qx][qy] = s[1];
|
||||
sQ[2][qx][qy] = s[2];
|
||||
sQ[3][qx][qy] = s[3];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
real_t s[4] = {};
|
||||
for (int qy = 0; qy < Q1D; ++qy)
|
||||
{
|
||||
const real_t By = sB[dy][qy], Gy = sG[dy][qy];
|
||||
s[0] += By * By * sQ[0][qx][qy];
|
||||
s[1] += Gy * By * sQ[1][qx][qy];
|
||||
s[2] += By * By * sQ[2][qx][qy];
|
||||
s[3] += By * By * sQ[3][qx][qy];
|
||||
}
|
||||
sM[0][dy][qx] = s[0];
|
||||
sM[1][dy][qx] = s[1];
|
||||
sM[2][dy][qx] = s[2];
|
||||
sM[3][dy][qx] = s[3];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(dx, x, D1D)
|
||||
{
|
||||
real_t d = 0.0;
|
||||
for (int qx = 0; qx < Q1D; ++qx)
|
||||
{
|
||||
const real_t Bx = sB[dx][qx], Gx = sG[dx][qx];
|
||||
d += Gx * Bx * sM[0][dy][qx];
|
||||
d += Bx * Bx * sM[1][dy][qx];
|
||||
d += Bx * Bx * sM[2][dy][qx];
|
||||
d += Bx * Bx * sM[3][dy][qx];
|
||||
}
|
||||
D(dx, dy, dz, v, e) += d;
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
} // namespace internal
|
||||
|
||||
template<int T_D1D, int T_Q1D>
|
||||
VectorConvectionNLFIntegrator::GradDiagPAType
|
||||
VectorConvectionNLFIntegrator::GradDiagPA2D::Kernel()
|
||||
{
|
||||
static_assert(T_D1D <= T_Q1D, "d1d > q1d is not supported");
|
||||
return internal::SmemPAConvectionNLGradDiagonal2D<T_D1D, T_Q1D>;
|
||||
}
|
||||
|
||||
inline VectorConvectionNLFIntegrator::GradDiagPAType
|
||||
VectorConvectionNLFIntegrator::GradDiagPA2D::Fallback(int d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= q1d, "d1d > q1d is not supported");
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
return internal::SmemPAConvectionNLGradDiagonal2D<>;
|
||||
}
|
||||
|
||||
template<int T_D1D, int T_Q1D>
|
||||
VectorConvectionNLFIntegrator::GradDiagPAType
|
||||
VectorConvectionNLFIntegrator::GradDiagPA3D::Kernel()
|
||||
{
|
||||
static_assert(T_D1D <= T_Q1D, "d1d > q1d is not supported");
|
||||
return internal::SmemPAConvectionNLGradDiagonal3D<T_D1D, T_Q1D>;
|
||||
}
|
||||
|
||||
inline VectorConvectionNLFIntegrator::GradDiagPAType
|
||||
VectorConvectionNLFIntegrator::GradDiagPA3D::Fallback(int d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= q1d, "d1d > q1d is not supported");
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
return internal::SmemPAConvectionNLGradDiagonal3D<>;
|
||||
}
|
||||
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
} // namespace mfem
|
||||
@@ -0,0 +1,64 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "../ceed/interface/util.hpp"
|
||||
#include "./nonlininteg_vecconvection_pa_grad.hpp" // IWYU pragma: keep
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
void VectorConvectionNLFIntegrator::AssembleGradPA(
|
||||
const Vector &u, const FiniteElementSpace &fes)
|
||||
{
|
||||
MFEM_VERIFY(!DeviceCanUseCeed(),
|
||||
"VectorConvectionNLFIntegrator PA gradients are not supported "
|
||||
"with the libCEED backend");
|
||||
|
||||
this->pa_u = u;
|
||||
AssemblePA(fes);
|
||||
}
|
||||
|
||||
void VectorConvectionNLFIntegrator::AddMultGradPA(const Vector &x,
|
||||
Vector &y) const
|
||||
{
|
||||
MFEM_VERIFY(!DeviceCanUseCeed(),
|
||||
"VectorConvectionNLFIntegrator PA gradients are not supported "
|
||||
"with the libCEED backend");
|
||||
|
||||
if (dim == 2)
|
||||
{
|
||||
AddMultGradPA2D::Run(d1d, q1d, ne,
|
||||
maps->B.Read(),
|
||||
maps->G.Read(),
|
||||
pa_adj.Read(),
|
||||
pa_u.Read(),
|
||||
x.Read(),
|
||||
y.ReadWrite(),
|
||||
d1d, q1d);
|
||||
}
|
||||
else if (dim == 3)
|
||||
{
|
||||
AddMultGradPA3D::Run(d1d, q1d, ne,
|
||||
maps->B.Read(),
|
||||
maps->G.Read(),
|
||||
pa_adj.Read(),
|
||||
pa_u.Read(),
|
||||
x.Read(),
|
||||
y.ReadWrite(),
|
||||
d1d, q1d);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unsupported dimension");
|
||||
}
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
@@ -0,0 +1,257 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
#pragma once
|
||||
|
||||
#include "../../config/config.hpp"
|
||||
#include "../../general/forall.hpp"
|
||||
#include "../../linalg/dtensor.hpp"
|
||||
#include "../kernels.hpp"
|
||||
#include "../nonlininteg.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// \cond DO_NOT_DOCUMENT
|
||||
|
||||
namespace internal
|
||||
{
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLGradApply2D(const int ne,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *u,
|
||||
const real_t *du,
|
||||
real_t *y,
|
||||
const int d1d,
|
||||
const int q1d)
|
||||
{
|
||||
static constexpr int VDIM = 2, DIM = 2;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, ne);
|
||||
const auto U = Reshape(u, D1D, D1D, VDIM, ne);
|
||||
const auto dU = Reshape(du, D1D, D1D, VDIM, ne);
|
||||
auto Y = Reshape(y, D1D, D1D, VDIM, ne);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(ne, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::vd_regs2d_t<VDIM, DIM, MQ1> g0, g1, g2;
|
||||
kernels::internal::v_regs2d_t<DIM, MQ1> r0, r1, r2;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, b, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, g, sG);
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, dU, g0);
|
||||
kernels::internal::Grad2d(D1D, Q1D, smem, sB, sG, g0, g1); // δu gradient
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, U, r0);
|
||||
kernels::internal::Eval2d(D1D, Q1D, smem, sB, r0, r2); // u value
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, dU, r0);
|
||||
kernels::internal::Eval2d(D1D, Q1D, smem, sB, r0, r1); // δu value
|
||||
|
||||
kernels::internal::LoadDofs2d(e, D1D, U, g0);
|
||||
kernels::internal::Grad2d(D1D, Q1D, smem, sB, sG, g0, g2); // u gradient
|
||||
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
// First part of the Jacobian: u·∇δu
|
||||
const future::tensor<real_t, DIM> u_val =
|
||||
{
|
||||
r2[0][qy][qx], r2[1][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> Q_adj =
|
||||
{
|
||||
{ { A(0, 0, qx, qy, e), A(1, 0, qx, qy, e) },
|
||||
{ A(0, 1, qx, qy, e), A(1, 1, qx, qy, e) }
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> grad_dU =
|
||||
{
|
||||
{ { g1[0][0][qy][qx], g1[1][0][qy][qx] },
|
||||
{ g1[0][1][qy][qx], g1[1][1][qy][qx] }
|
||||
}
|
||||
};
|
||||
const auto one = transpose(grad_dU) * (Q_adj * u_val);
|
||||
|
||||
// Second part of the Jacobian: δu·∇u
|
||||
const future::tensor<real_t, DIM> du_val =
|
||||
{
|
||||
r1[0][qy][qx], r1[1][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> grad_U =
|
||||
{
|
||||
{ { g2[0][0][qy][qx], g2[1][0][qy][qx] },
|
||||
{ g2[0][1][qy][qx], g2[1][1][qy][qx] }
|
||||
}
|
||||
};
|
||||
const auto two = transpose(grad_U) * (Q_adj * du_val);
|
||||
|
||||
// u⋅∇δu + δu⋅∇u
|
||||
r0[0][qy][qx] = one[0] + two[0];
|
||||
r0[1][qy][qx] = one[1] + two[1];
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
kernels::internal::EvalTranspose2d(D1D, Q1D, smem, sB, r0, r1);
|
||||
kernels::internal::WriteDofs2d(e, D1D, r1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
template<int T_D1D = 0, int T_Q1D = 0>
|
||||
inline void SmemPAConvectionNLGradApply3D(const int ne,
|
||||
const real_t *b,
|
||||
const real_t *g,
|
||||
const real_t *a,
|
||||
const real_t *u,
|
||||
const real_t *du,
|
||||
real_t *y,
|
||||
const int d1d,
|
||||
const int q1d)
|
||||
{
|
||||
static constexpr int VDIM = 3, DIM = 3;
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
|
||||
const auto A = Reshape(a, VDIM, DIM, Q1D, Q1D, Q1D, ne);
|
||||
const auto U = Reshape(u, D1D, D1D, D1D, VDIM, ne);
|
||||
const auto dU = Reshape(du, D1D, D1D, D1D, VDIM, ne);
|
||||
auto Y = Reshape(y, D1D, D1D, D1D, VDIM, ne);
|
||||
|
||||
mfem::forall_2D<T_Q1D * T_Q1D>(ne, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
constexpr int MD1 = T_D1D ? T_D1D : DofQuadLimits::MAX_D1D;
|
||||
constexpr int MQ1 = T_Q1D ? T_Q1D : DofQuadLimits::MAX_Q1D;
|
||||
|
||||
MFEM_SHARED real_t smem[MQ1][MQ1];
|
||||
MFEM_SHARED real_t sB[MD1][MQ1], sG[MD1][MQ1];
|
||||
|
||||
kernels::internal::v_regs3d_t<VDIM, MQ1> r0, r1, r2;
|
||||
kernels::internal::vd_regs3d_t<VDIM, DIM, MQ1> g0, g1, g2;
|
||||
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, b, sB);
|
||||
kernels::internal::LoadMatrix(D1D, Q1D, g, sG);
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, dU, g0);
|
||||
kernels::internal::Grad3d(D1D, Q1D, smem, sB, sG, g0, g1); // δu gradient
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, U, r0);
|
||||
kernels::internal::Eval3d(D1D, Q1D, smem, sB, r0, r2); // u value
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, dU, r0);
|
||||
kernels::internal::Eval3d(D1D, Q1D, smem, sB, r0, r1); // δu value
|
||||
|
||||
kernels::internal::LoadDofs3d(e, D1D, U, g0);
|
||||
kernels::internal::Grad3d(D1D, Q1D, smem, sB, sG, g0, g2); // u gradient
|
||||
|
||||
for (int qz = 0; qz < Q1D; qz++)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qy, y, Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, Q1D)
|
||||
{
|
||||
// First part of the Jacobian: u·∇δu
|
||||
const future::tensor<real_t, DIM> u_val =
|
||||
{
|
||||
r2[0][qz][qy][qx],
|
||||
r2[1][qz][qy][qx],
|
||||
r2[2][qz][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> Q_adj = {{
|
||||
{A(0,0,qx,qy,qz,e), A(1,0,qx,qy,qz,e), A(2,0,qx,qy,qz,e)},
|
||||
{A(0,1,qx,qy,qz,e), A(1,1,qx,qy,qz,e), A(2,1,qx,qy,qz,e)},
|
||||
{A(0,2,qx,qy,qz,e), A(1,2,qx,qy,qz,e), A(2,2,qx,qy,qz,e)}
|
||||
}
|
||||
};
|
||||
const future::tensor<real_t, DIM, DIM> grad_dU = {{
|
||||
{g1[0][0][qz][qy][qx], g1[1][0][qz][qy][qx], g1[2][0][qz][qy][qx]},
|
||||
{g1[0][1][qz][qy][qx], g1[1][1][qz][qy][qx], g1[2][1][qz][qy][qx]},
|
||||
{g1[0][2][qz][qy][qx], g1[1][2][qz][qy][qx], g1[2][2][qz][qy][qx]}
|
||||
}
|
||||
};
|
||||
const auto one = transpose(grad_dU) * (Q_adj * u_val);
|
||||
|
||||
// Second part of the Jacobian: δu·∇u
|
||||
const future::tensor<real_t, DIM> du_val =
|
||||
{
|
||||
r1[0][qz][qy][qx], r1[1][qz][qy][qx], r1[2][qz][qy][qx]
|
||||
};
|
||||
const future::tensor<real_t, VDIM, DIM> grad_U = {{
|
||||
{g2[0][0][qz][qy][qx], g2[1][0][qz][qy][qx], g2[2][0][qz][qy][qx]},
|
||||
{g2[0][1][qz][qy][qx], g2[1][1][qz][qy][qx], g2[2][1][qz][qy][qx]},
|
||||
{g2[0][2][qz][qy][qx], g2[1][2][qz][qy][qx], g2[2][2][qz][qy][qx]}
|
||||
}
|
||||
};
|
||||
const auto two = transpose(grad_U) * (Q_adj * du_val);
|
||||
|
||||
// u⋅∇δu + δu⋅∇u
|
||||
r0[0][qz][qy][qx] = one[0] + two[0];
|
||||
r0[1][qz][qy][qx] = one[1] + two[1];
|
||||
r0[2][qz][qy][qx] = one[2] + two[2];
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
kernels::internal::EvalTranspose3d(D1D, Q1D, smem, sB, r0, r1);
|
||||
kernels::internal::WriteDofs3d(e, D1D, r1, Y);
|
||||
});
|
||||
}
|
||||
|
||||
} // namespace internal
|
||||
|
||||
template<int T_D1D, int T_Q1D>
|
||||
VectorConvectionNLFIntegrator::AddMultGradPAType
|
||||
VectorConvectionNLFIntegrator::AddMultGradPA2D::Kernel()
|
||||
{
|
||||
static_assert(T_D1D <= T_Q1D, "d1d > q1d is not supported");
|
||||
return internal::SmemPAConvectionNLGradApply2D<T_D1D, T_Q1D>;
|
||||
}
|
||||
|
||||
inline VectorConvectionNLFIntegrator::AddMultGradPAType
|
||||
VectorConvectionNLFIntegrator::AddMultGradPA2D::Fallback(int d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= q1d, "d1d > q1d is not supported");
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
return internal::SmemPAConvectionNLGradApply2D<>;
|
||||
}
|
||||
|
||||
template<int T_D1D, int T_Q1D>
|
||||
VectorConvectionNLFIntegrator::AddMultGradPAType
|
||||
VectorConvectionNLFIntegrator::AddMultGradPA3D::Kernel()
|
||||
{
|
||||
static_assert(T_D1D <= T_Q1D, "d1d > q1d is not supported");
|
||||
return internal::SmemPAConvectionNLGradApply3D<T_D1D, T_Q1D>;
|
||||
}
|
||||
|
||||
inline VectorConvectionNLFIntegrator::AddMultGradPAType
|
||||
VectorConvectionNLFIntegrator::AddMultGradPA3D::Fallback(int d1d, int q1d)
|
||||
{
|
||||
MFEM_VERIFY(d1d <= q1d, "d1d > q1d is not supported");
|
||||
MFEM_VERIFY(d1d <= DeviceDofQuadLimits::Get().MAX_D1D, "");
|
||||
MFEM_VERIFY(q1d <= DeviceDofQuadLimits::Get().MAX_Q1D, "");
|
||||
return internal::SmemPAConvectionNLGradApply3D<>;
|
||||
}
|
||||
|
||||
/// \endcond DO_NOT_DOCUMENT
|
||||
|
||||
} // namespace mfem
|
||||
+4
-8
@@ -542,7 +542,10 @@ void QuadratureFunctions1D::GaussJacobi(const int np, const real_t alpha,
|
||||
return;
|
||||
}
|
||||
|
||||
#ifndef MFEM_USE_MPFR
|
||||
#ifdef MFEM_USE_MPFR
|
||||
MFEM_WARNING("MPFR implementation of Gauss-Jacobi quadrature not implemented yet. Falling "
|
||||
"back to double precision implementation...");
|
||||
#endif
|
||||
|
||||
const int n = np;
|
||||
// common constants for Jacobi polynomials
|
||||
@@ -611,13 +614,6 @@ void QuadratureFunctions1D::GaussJacobi(const int np, const real_t alpha,
|
||||
ab + 1) / ((1.0 - xi*xi)*pp*pp) / pow(2, ab);
|
||||
// map nodes and weights to the interval [0,1]
|
||||
}
|
||||
|
||||
#else // MFEM_USE_MPFR is defined
|
||||
|
||||
MFEM_ABORT("MPFR implementation of Gauss-Jacobi quadrature not defined yet");
|
||||
|
||||
#endif // MFEM_USE_MPFR
|
||||
|
||||
}
|
||||
|
||||
|
||||
|
||||
@@ -61,7 +61,7 @@ namespace mfem
|
||||
#define MFEM_REGISTER_KERNELS_1(KernelName, KernelType, Params) \
|
||||
MFEM_REGISTER_KERNELS_(KernelName, KernelType, Params, (), Params)
|
||||
|
||||
// Version of MFEM_REGISTER_KERNELS without any optional (non-dispatch)
|
||||
// Version of MFEM_REGISTER_KERNELS with optional (non-dispatch)
|
||||
// parameters (e.g. NBZ).
|
||||
#define MFEM_REGISTER_KERNELS_2(KernelName, KernelType, Params, OptParams) \
|
||||
MFEM_REGISTER_KERNELS_(KernelName, KernelType, Params, OptParams, \
|
||||
|
||||
+9
-2
@@ -83,7 +83,7 @@ constexpr int SetMaxOf(int n) { return NextMultipleOf<4>(n); }
|
||||
#endif // CUDA/HIP && DEVICE_COMPILE
|
||||
|
||||
/// Load 2D matrix into shared memory
|
||||
template <int MQ1>
|
||||
template <int MQ1, bool TRANSPOSE = false>
|
||||
inline MFEM_HOST_DEVICE void LoadMatrix(const int d1d, const int q1d,
|
||||
const real_t *M, real_t (*N)[MQ1])
|
||||
{
|
||||
@@ -91,7 +91,14 @@ inline MFEM_HOST_DEVICE void LoadMatrix(const int d1d, const int q1d,
|
||||
{
|
||||
MFEM_FOREACH_THREAD_DIRECT(qx, x, q1d)
|
||||
{
|
||||
N[dy][qx] = M[dy * q1d + qx];
|
||||
if constexpr (TRANSPOSE)
|
||||
{
|
||||
N[dy][qx] = M[qx * d1d + dy];
|
||||
}
|
||||
else
|
||||
{
|
||||
N[dy][qx] = M[dy * q1d + qx];
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
@@ -224,9 +224,6 @@ public:
|
||||
/** @see GetGradient(const Vector &) */
|
||||
Operator &GetGradient(const Vector &x, bool finalize) const;
|
||||
|
||||
/// Suppress a warning about hiding overloaded virtual function.
|
||||
using Operator::GetGradient;
|
||||
|
||||
/// Update the NonlinearForm to propagate updates of the associated FE space.
|
||||
/** After calling this method, the essential boundary conditions need to be
|
||||
set again. */
|
||||
|
||||
@@ -100,6 +100,17 @@ PANonlinearFormExtension::Gradient::Gradient(const PANonlinearFormExtension &e):
|
||||
|
||||
void PANonlinearFormExtension::Gradient::AssembleGrad(const Vector &g)
|
||||
{
|
||||
if (DeviceCanUseCeed())
|
||||
{
|
||||
for (int i = 0; i < ext.dnfi.Size(); ++i)
|
||||
{
|
||||
MFEM_VERIFY(dynamic_cast<VectorConvectionNLFIntegrator *>
|
||||
(ext.dnfi[i]) == nullptr,
|
||||
"VectorConvectionNLFIntegrator PA gradients are not supported "
|
||||
"with the libCEED backend");
|
||||
}
|
||||
}
|
||||
|
||||
ext.elemR->Mult(g, ext.xe);
|
||||
for (int i = 0; i < ext.dnfi.Size(); ++i)
|
||||
{
|
||||
|
||||
@@ -954,4 +954,74 @@ void SkewSymmetricVectorConvectionNLFIntegrator::AssembleElementGrad(
|
||||
}
|
||||
}
|
||||
|
||||
void ConvectiveVectorConvectionNLFIntegrator::AssemblePA(
|
||||
const FiniteElementSpace &)
|
||||
{
|
||||
MFEM_ABORT("ConvectiveVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void ConvectiveVectorConvectionNLFIntegrator::AssembleGradPA(
|
||||
const Vector &, const FiniteElementSpace &)
|
||||
{
|
||||
MFEM_ABORT("ConvectiveVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void ConvectiveVectorConvectionNLFIntegrator::AddMultPA(
|
||||
const Vector &, Vector &) const
|
||||
{
|
||||
MFEM_ABORT("ConvectiveVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void ConvectiveVectorConvectionNLFIntegrator::AddMultGradPA(
|
||||
const Vector &, Vector &) const
|
||||
{
|
||||
MFEM_ABORT("ConvectiveVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void ConvectiveVectorConvectionNLFIntegrator::AssembleGradDiagonalPA(
|
||||
Vector &) const
|
||||
{
|
||||
MFEM_ABORT("ConvectiveVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void SkewSymmetricVectorConvectionNLFIntegrator::AssemblePA(
|
||||
const FiniteElementSpace &)
|
||||
{
|
||||
MFEM_ABORT("SkewSymmetricVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void SkewSymmetricVectorConvectionNLFIntegrator::AssembleGradPA(
|
||||
const Vector &, const FiniteElementSpace &)
|
||||
{
|
||||
MFEM_ABORT("SkewSymmetricVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void SkewSymmetricVectorConvectionNLFIntegrator::AddMultPA(
|
||||
const Vector &, Vector &) const
|
||||
{
|
||||
MFEM_ABORT("SkewSymmetricVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void SkewSymmetricVectorConvectionNLFIntegrator::AddMultGradPA(
|
||||
const Vector &, Vector &) const
|
||||
{
|
||||
MFEM_ABORT("SkewSymmetricVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
void SkewSymmetricVectorConvectionNLFIntegrator::AssembleGradDiagonalPA(
|
||||
Vector &) const
|
||||
{
|
||||
MFEM_ABORT("SkewSymmetricVectorConvectionNLFIntegrator does not support "
|
||||
"partial assembly; use VectorConvectionNLFIntegrator");
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
+70
-8
@@ -18,6 +18,7 @@
|
||||
#include "fespace.hpp"
|
||||
#include "ceed/interface/operator.hpp"
|
||||
#include "integrator.hpp"
|
||||
#include "kernel_dispatch.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
@@ -384,15 +385,17 @@ private:
|
||||
DenseMatrix dshape, dshapex, EF, gradEF, ELV, elmat_comp;
|
||||
Vector shape;
|
||||
// PA extension
|
||||
Vector pa_data;
|
||||
int dim, ne, nq, d1d, q1d;
|
||||
Vector pa_adj, pa_u;
|
||||
const DofToQuad *maps; ///< Not owned
|
||||
const GeometricFactors *geom; ///< Not owned
|
||||
int dim, ne, nq;
|
||||
|
||||
public:
|
||||
VectorConvectionNLFIntegrator(Coefficient &q): Q(&q) { }
|
||||
struct Kernels { Kernels(); };
|
||||
|
||||
VectorConvectionNLFIntegrator() = default;
|
||||
VectorConvectionNLFIntegrator(Coefficient &q): Q(&q) { static Kernels kernels; }
|
||||
|
||||
VectorConvectionNLFIntegrator() { static Kernels kernels; }
|
||||
|
||||
static const IntegrationRule &GetRule(const FiniteElement &fe,
|
||||
const ElementTransformation &T);
|
||||
@@ -411,12 +414,55 @@ public:
|
||||
|
||||
void AssemblePA(const FiniteElementSpace &fes) override;
|
||||
|
||||
void AssembleMF(const FiniteElementSpace &fes) override;
|
||||
void AssembleGradPA(const Vector &x, const FiniteElementSpace &fes) override;
|
||||
|
||||
void AddMultPA(const Vector &x, Vector &y) const override;
|
||||
|
||||
void AddMultMF(const Vector &x, Vector &y) const override;
|
||||
using AddMultPAType =
|
||||
void(*)(const int ne, const real_t *B, const real_t *G, const real_t *A,
|
||||
const real_t *x, real_t *y,
|
||||
const int d1d, const int q1d);
|
||||
MFEM_REGISTER_KERNELS(AddMultPAKernels, AddMultPAType, (int, int, int));
|
||||
|
||||
void AddMultGradPA(const Vector &x, Vector &y) const override;
|
||||
|
||||
using AddMultGradPAType =
|
||||
void(*)(const int ne, const real_t *B, const real_t *G, const real_t *A,
|
||||
const real_t *u, const real_t *x, real_t *y,
|
||||
const int d1d, const int q1d);
|
||||
|
||||
MFEM_REGISTER_KERNELS(AddMultGradPA2D, AddMultGradPAType, (int, int));
|
||||
MFEM_REGISTER_KERNELS(AddMultGradPA3D, AddMultGradPAType, (int, int));
|
||||
|
||||
void AssembleGradDiagonalPA(Vector &) const override;
|
||||
|
||||
using GradDiagPAType =
|
||||
void (*)(const int ne, const real_t *B, const real_t *G, const real_t *A,
|
||||
const real_t *u, real_t *y,
|
||||
const int d1d, const int q1d);
|
||||
|
||||
MFEM_REGISTER_KERNELS(GradDiagPA2D, GradDiagPAType, (int, int));
|
||||
MFEM_REGISTER_KERNELS(GradDiagPA3D, GradDiagPAType, (int, int));
|
||||
|
||||
template <int DIM, int D1D, int Q1D>
|
||||
static void AddSpecialization()
|
||||
{
|
||||
AddMultPAKernels::Specialization<DIM, D1D, Q1D>::Add();
|
||||
if constexpr (DIM == 2)
|
||||
{
|
||||
AddMultGradPA2D::Specialization<D1D, Q1D>::Add();
|
||||
GradDiagPA2D::Specialization<D1D, Q1D>::Add();
|
||||
}
|
||||
else if constexpr (DIM == 3)
|
||||
{
|
||||
AddMultGradPA3D::Specialization<D1D, Q1D>::Add();
|
||||
GradDiagPA3D::Specialization<D1D, Q1D>::Add();
|
||||
}
|
||||
}
|
||||
|
||||
void AssembleMF(const FiniteElementSpace &fes) override;
|
||||
|
||||
void AddMultMF(const Vector &x, Vector &y) const override;
|
||||
|
||||
protected:
|
||||
const IntegrationRule* GetDefaultIntegrationRule(
|
||||
@@ -430,7 +476,8 @@ protected:
|
||||
|
||||
|
||||
/** This class is used to assemble the convective form of the nonlinear term
|
||||
arising in the Navier-Stokes equations $(u \cdot \nabla v, w )$ */
|
||||
arising in the Navier-Stokes equations $(u \cdot \nabla v, w )$.
|
||||
Partial assembly is not supported; use VectorConvectionNLFIntegrator. */
|
||||
class ConvectiveVectorConvectionNLFIntegrator :
|
||||
public VectorConvectionNLFIntegrator
|
||||
{
|
||||
@@ -448,12 +495,20 @@ public:
|
||||
ElementTransformation &trans,
|
||||
const Vector &elfun,
|
||||
DenseMatrix &elmat) override;
|
||||
|
||||
using NonlinearFormIntegrator::AssemblePA;
|
||||
void AssemblePA(const FiniteElementSpace &fes) override;
|
||||
void AssembleGradPA(const Vector &x, const FiniteElementSpace &fes) override;
|
||||
void AddMultPA(const Vector &x, Vector &y) const override;
|
||||
void AddMultGradPA(const Vector &x, Vector &y) const override;
|
||||
void AssembleGradDiagonalPA(Vector &diag) const override;
|
||||
};
|
||||
|
||||
|
||||
/** This class is used to assemble the skew-symmetric form of the nonlinear term
|
||||
arising in the Navier-Stokes equations
|
||||
$.5*(u \cdot \nabla v, w ) - .5*(u \cdot \nabla w, v )$ */
|
||||
$.5*(u \cdot \nabla v, w ) - .5*(u \cdot \nabla w, v )$.
|
||||
Partial assembly is not supported; use VectorConvectionNLFIntegrator. */
|
||||
class SkewSymmetricVectorConvectionNLFIntegrator :
|
||||
public VectorConvectionNLFIntegrator
|
||||
{
|
||||
@@ -471,6 +526,13 @@ public:
|
||||
ElementTransformation &trans,
|
||||
const Vector &elfun,
|
||||
DenseMatrix &elmat) override;
|
||||
|
||||
using NonlinearFormIntegrator::AssemblePA;
|
||||
void AssemblePA(const FiniteElementSpace &fes) override;
|
||||
void AssembleGradPA(const Vector &x, const FiniteElementSpace &fes) override;
|
||||
void AddMultPA(const Vector &x, Vector &y) const override;
|
||||
void AddMultGradPA(const Vector &x, Vector &y) const override;
|
||||
void AssembleGradDiagonalPA(Vector &diag) const override;
|
||||
};
|
||||
|
||||
}
|
||||
|
||||
+11
-1
@@ -22,10 +22,20 @@ using namespace std;
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
ParGridFunction::ParGridFunction(ParFiniteElementSpace *pf, GridFunction *gf)
|
||||
ParGridFunction::ParGridFunction(ParFiniteElementSpace *pf, GridFunction *gf,
|
||||
bool preserve)
|
||||
{
|
||||
fes = pfes = pf;
|
||||
SetDataAndSize(gf->GetData(), gf->Size());
|
||||
|
||||
if (pfes->HaveDofSigns())
|
||||
{
|
||||
MFEM_VERIFY(!preserve, "Differing sign conventions for the serial and "
|
||||
"parallel grid functions will prevent preserving the serial "
|
||||
"GridFunctions in this context.");
|
||||
|
||||
pfes->ApplyDofSigns(HostReadWrite());
|
||||
}
|
||||
}
|
||||
|
||||
ParGridFunction::ParGridFunction(ParFiniteElementSpace *pf, HypreParVector *tv)
|
||||
|
||||
+6
-2
@@ -100,8 +100,12 @@ public:
|
||||
/// Construct a ParGridFunction using a GridFunction as external data.
|
||||
/** The parallel space @a *pf and the space used by @a *gf should match. The
|
||||
data from @a *gf is used as the local data of the ParGridFunction on each
|
||||
processor. The ParGridFunction does not assume ownership of the data. */
|
||||
ParGridFunction(ParFiniteElementSpace *pf, GridFunction *gf);
|
||||
processor. The ParGridFunction does not assume ownership of the data.
|
||||
The boolean, @a preserve, indicates that the data stored in @a *gf should
|
||||
remain unchanged. An error will occur if @a preserve is true and
|
||||
construction of a valid ParGridFunction requires the data to change. */
|
||||
ParGridFunction(ParFiniteElementSpace *pf, GridFunction *gf,
|
||||
bool preserve = true);
|
||||
|
||||
/** @brief Creates grid function on (all) dofs from a given vector on the
|
||||
true dofs, i.e. P tv. */
|
||||
|
||||
+17
-18
@@ -21,24 +21,23 @@ namespace quadrature_interpolator
|
||||
|
||||
void InitDetKernels()
|
||||
{
|
||||
using k = QuadratureInterpolator::DetKernels;
|
||||
// 2D
|
||||
k::Specialization<2,2,2,2>::Add();
|
||||
k::Specialization<2,2,2,3>::Add();
|
||||
k::Specialization<2,2,2,4>::Add();
|
||||
k::Specialization<2,2,2,6>::Add();
|
||||
k::Specialization<2,2,3,4>::Add();
|
||||
k::Specialization<2,2,3,6>::Add();
|
||||
k::Specialization<2,2,4,4>::Add();
|
||||
k::Specialization<2,2,4,6>::Add();
|
||||
k::Specialization<2,2,5,6>::Add();
|
||||
QuadratureInterpolator::AddDetSpecializations<2,2,2,2>();
|
||||
QuadratureInterpolator::AddDetSpecializations<2,2,2,3>();
|
||||
QuadratureInterpolator::AddDetSpecializations<2,2,2,4>();
|
||||
QuadratureInterpolator::AddDetSpecializations<2,2,2,6>();
|
||||
QuadratureInterpolator::AddDetSpecializations<2,2,3,4>();
|
||||
QuadratureInterpolator::AddDetSpecializations<2,2,3,6>();
|
||||
QuadratureInterpolator::AddDetSpecializations<2,2,4,4>();
|
||||
QuadratureInterpolator::AddDetSpecializations<2,2,4,6>();
|
||||
QuadratureInterpolator::AddDetSpecializations<2,2,5,6>();
|
||||
// 3D
|
||||
k::Specialization<3,3,2,4>::Add();
|
||||
k::Specialization<3,3,3,3>::Add();
|
||||
k::Specialization<3,3,3,5>::Add();
|
||||
k::Specialization<3,3,3,6>::Add();
|
||||
k::Specialization<3,3,4,6>::Add();
|
||||
k::Specialization<3,3,3,4>::Add();
|
||||
QuadratureInterpolator::AddDetSpecializations<3,3,2,4>();
|
||||
QuadratureInterpolator::AddDetSpecializations<3,3,3,3>();
|
||||
QuadratureInterpolator::AddDetSpecializations<3,3,3,5>();
|
||||
QuadratureInterpolator::AddDetSpecializations<3,3,3,6>();
|
||||
QuadratureInterpolator::AddDetSpecializations<3,3,4,6>();
|
||||
QuadratureInterpolator::AddDetSpecializations<3,3,3,4>();
|
||||
}
|
||||
|
||||
} // namespace quadrature_interpolator
|
||||
@@ -47,8 +46,8 @@ void InitDetKernels()
|
||||
/// @cond Suppress_Doxygen_warnings
|
||||
|
||||
QuadratureInterpolator::DetKernelType
|
||||
QuadratureInterpolator::DetKernels::Fallback(
|
||||
int DIM, int SDIM, int D1D, int Q1D)
|
||||
QuadratureInterpolator::DetKernels::Fallback(int DIM, int SDIM, int D1D,
|
||||
int Q1D)
|
||||
{
|
||||
if (DIM == 1)
|
||||
{
|
||||
|
||||
+548
-56
@@ -30,23 +30,18 @@ namespace internal
|
||||
namespace quadrature_interpolator
|
||||
{
|
||||
|
||||
template<QVectorLayout Q_LAYOUT>
|
||||
static void Values1D(const int NE,
|
||||
const real_t *b_,
|
||||
const real_t *x_,
|
||||
real_t *y_,
|
||||
const int vdim,
|
||||
const int d1d,
|
||||
const int q1d)
|
||||
template <QVectorLayout Q_LAYOUT, bool Integral>
|
||||
static void ImplValues1D(const int NE, const real_t *b_, const real_t *detJ_,
|
||||
const real_t *x_, real_t *y_, const int vdim,
|
||||
const int d1d, const int q1d)
|
||||
{
|
||||
const auto b = Reshape(b_, q1d, d1d);
|
||||
const auto x = Reshape(x_, d1d, vdim, NE);
|
||||
auto y = Q_LAYOUT == QVectorLayout::byNODES ?
|
||||
Reshape(y_, q1d, vdim, NE):
|
||||
Reshape(y_, vdim, q1d, NE);
|
||||
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
const auto b = Reshape(b_, q1d, d1d);
|
||||
const auto x = Reshape(x_, d1d, vdim, NE);
|
||||
const auto detJ = Reshape(detJ_, q1d, NE);
|
||||
auto y = Q_LAYOUT == QVectorLayout::byNODES ? Reshape(y_, q1d, vdim, NE)
|
||||
: Reshape(y_, vdim, q1d, NE);
|
||||
for (int c = 0; c < vdim; c++)
|
||||
{
|
||||
for (int q = 0; q < q1d; q++)
|
||||
@@ -56,24 +51,36 @@ static void Values1D(const int NE,
|
||||
{
|
||||
u += b(q, d) * x(d, c, e);
|
||||
}
|
||||
if (Q_LAYOUT == QVectorLayout::byVDIM) { y(c, q, e) = u; }
|
||||
if (Q_LAYOUT == QVectorLayout::byNODES) { y(q, c, e) = u; }
|
||||
if constexpr (Integral)
|
||||
{
|
||||
u /= detJ(q, e);
|
||||
}
|
||||
if constexpr (Q_LAYOUT == QVectorLayout::byVDIM)
|
||||
{
|
||||
y(c, q, e) = u;
|
||||
}
|
||||
if constexpr (Q_LAYOUT == QVectorLayout::byNODES)
|
||||
{
|
||||
y(q, c, e) = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
template <QVectorLayout Q_LAYOUT>
|
||||
static void Values1D(const int NE, const real_t *b_, const real_t *x_,
|
||||
real_t *y_, const int vdim, const int d1d, const int q1d)
|
||||
{
|
||||
ImplValues1D<Q_LAYOUT, false>(NE, b_, nullptr, x_, y_, vdim, d1d, q1d);
|
||||
}
|
||||
|
||||
// Template compute kernel for Values in 2D: tensor product version.
|
||||
template<QVectorLayout Q_LAYOUT,
|
||||
int T_VDIM = 0, int T_D1D = 0, int T_Q1D = 0,
|
||||
int T_NBZ = 1>
|
||||
static void Values2D(const int NE,
|
||||
const real_t *b_,
|
||||
const real_t *x_,
|
||||
real_t *y_,
|
||||
const int vdim = 0,
|
||||
const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
template <QVectorLayout Q_LAYOUT, bool Integral, int T_VDIM = 0, int T_D1D = 0,
|
||||
int T_Q1D = 0, int T_NBZ = 1>
|
||||
static void ImplValues2D(const int NE, const real_t *b_, const real_t *detJ_,
|
||||
const real_t *x_, real_t *y_, const int vdim = 0,
|
||||
const int d1d = 0, const int q1d = 0)
|
||||
{
|
||||
static constexpr int NBZ = T_NBZ ? T_NBZ : 1;
|
||||
|
||||
@@ -82,13 +89,14 @@ static void Values2D(const int NE,
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
|
||||
const auto b = Reshape(b_, Q1D, D1D);
|
||||
const auto x = Reshape(x_, D1D, D1D, VDIM, NE);
|
||||
auto y = Q_LAYOUT == QVectorLayout::byNODES ?
|
||||
Reshape(y_, Q1D, Q1D, VDIM, NE):
|
||||
Reshape(y_, VDIM, Q1D, Q1D, NE);
|
||||
|
||||
mfem::forall_2D_batch(NE, Q1D, Q1D, NBZ, [=] MFEM_HOST_DEVICE (int e)
|
||||
mfem::forall_2D_batch(NE, Q1D, Q1D, NBZ, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
const auto x = Reshape(x_, D1D, D1D, VDIM, NE);
|
||||
const auto detJ = Reshape(detJ_, Q1D, Q1D, NE);
|
||||
auto y = Q_LAYOUT == QVectorLayout::byNODES
|
||||
? Reshape(y_, Q1D, Q1D, VDIM, NE)
|
||||
: Reshape(y_, VDIM, Q1D, Q1D, NE);
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
@@ -110,16 +118,33 @@ static void Values2D(const int NE,
|
||||
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
kernels::internal::LoadX(e,D1D,c,x,DD);
|
||||
MFEM_FOREACH_THREAD(dy,y,D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx, x, D1D)
|
||||
{
|
||||
DD(dx, dy) = x(dx, dy, c, e);
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
kernels::internal::EvalX(D1D,Q1D,B,DD,DQ);
|
||||
kernels::internal::EvalY(D1D,Q1D,B,DQ,QQ);
|
||||
MFEM_FOREACH_THREAD(qy,y,Q1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx,x,Q1D)
|
||||
{
|
||||
real_t u = QQ(qx,qy);
|
||||
if (Q_LAYOUT == QVectorLayout::byVDIM) { y(c,qx,qy,e) = u; }
|
||||
if (Q_LAYOUT == QVectorLayout::byNODES) { y(qx,qy,c,e) = u; }
|
||||
real_t u = QQ(qx, qy);
|
||||
if constexpr (Integral)
|
||||
{
|
||||
u /= detJ(qx, qy, e);
|
||||
}
|
||||
if constexpr (Q_LAYOUT == QVectorLayout::byVDIM)
|
||||
{
|
||||
y(c, qx, qy, e) = u;
|
||||
}
|
||||
if constexpr (Q_LAYOUT == QVectorLayout::byNODES)
|
||||
{
|
||||
y(qx, qy, c, e) = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
@@ -127,29 +152,37 @@ static void Values2D(const int NE,
|
||||
});
|
||||
}
|
||||
|
||||
// Template compute kernel for Values in 3D: tensor product version.
|
||||
template<QVectorLayout Q_LAYOUT,
|
||||
int T_VDIM = 0, int T_D1D = 0, int T_Q1D = 0>
|
||||
static void Values3D(const int NE,
|
||||
const real_t *b_,
|
||||
const real_t *x_,
|
||||
real_t *y_,
|
||||
const int vdim = 0,
|
||||
const int d1d = 0,
|
||||
// Template compute kernel for Values in 2D: tensor product version.
|
||||
template <QVectorLayout Q_LAYOUT, int T_VDIM = 0, int T_D1D = 0, int T_Q1D = 0,
|
||||
int T_NBZ = 1>
|
||||
static void Values2D(const int NE, const real_t *b_, const real_t *x_,
|
||||
real_t *y_, const int vdim = 0, const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
return ImplValues2D<Q_LAYOUT, false, T_VDIM, T_D1D, T_Q1D, T_NBZ>(
|
||||
NE, b_, nullptr, x_, y_, vdim, d1d, q1d);
|
||||
}
|
||||
|
||||
// Template compute kernel for Values in 3D: tensor product version.
|
||||
template <QVectorLayout Q_LAYOUT, bool Integral, int T_VDIM = 0, int T_D1D = 0,
|
||||
int T_Q1D = 0>
|
||||
static void ImplValues3D(const int NE, const real_t *b_, const real_t *detJ_,
|
||||
const real_t *x_, real_t *y_, const int vdim = 0,
|
||||
const int d1d = 0, const int q1d = 0)
|
||||
{
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
|
||||
const auto b = Reshape(b_, Q1D, D1D);
|
||||
const auto x = Reshape(x_, D1D, D1D, D1D, VDIM, NE);
|
||||
auto y = Q_LAYOUT == QVectorLayout:: byNODES ?
|
||||
Reshape(y_, Q1D, Q1D, Q1D, VDIM, NE):
|
||||
Reshape(y_, VDIM, Q1D, Q1D, Q1D, NE);
|
||||
|
||||
mfem::forall_3D(NE, Q1D, Q1D, Q1D, [=] MFEM_HOST_DEVICE (int e)
|
||||
mfem::forall_3D(NE, Q1D, Q1D, Q1D, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
const auto x = Reshape(x_, D1D, D1D, D1D, VDIM, NE);
|
||||
const auto detJ = Reshape(detJ_, Q1D, Q1D, Q1D, NE);
|
||||
auto y = Q_LAYOUT == QVectorLayout::byNODES
|
||||
? Reshape(y_, Q1D, Q1D, Q1D, VDIM, NE)
|
||||
: Reshape(y_, VDIM, Q1D, Q1D, Q1D, NE);
|
||||
const int D1D = T_D1D ? T_D1D : d1d;
|
||||
const int Q1D = T_Q1D ? T_Q1D : q1d;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
@@ -171,7 +204,17 @@ static void Values3D(const int NE,
|
||||
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
kernels::internal::LoadX(e,D1D,c,x,DDD);
|
||||
MFEM_FOREACH_THREAD(dz, z, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dy, y, D1D)
|
||||
{
|
||||
MFEM_FOREACH_THREAD(dx, x, D1D)
|
||||
{
|
||||
DDD(dx, dy, dz) = x(dx, dy, dz, c, e);
|
||||
}
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
kernels::internal::EvalX(D1D,Q1D,B,DDD,DDQ);
|
||||
kernels::internal::EvalY(D1D,Q1D,B,DDQ,DQQ);
|
||||
kernels::internal::EvalZ(D1D,Q1D,B,DQQ,QQQ);
|
||||
@@ -181,9 +224,19 @@ static void Values3D(const int NE,
|
||||
{
|
||||
MFEM_FOREACH_THREAD(qx,x,Q1D)
|
||||
{
|
||||
const real_t u = QQQ(qz,qy,qx);
|
||||
if (Q_LAYOUT == QVectorLayout::byVDIM) { y(c,qx,qy,qz,e) = u; }
|
||||
if (Q_LAYOUT == QVectorLayout::byNODES) { y(qx,qy,qz,c,e) = u; }
|
||||
real_t u = QQQ(qz,qy,qx);
|
||||
if constexpr (Integral)
|
||||
{
|
||||
u /= detJ(qx, qy, qz, e);
|
||||
}
|
||||
if constexpr (Q_LAYOUT == QVectorLayout::byVDIM)
|
||||
{
|
||||
y(c, qx, qy, qz, e) = u;
|
||||
}
|
||||
if constexpr (Q_LAYOUT == QVectorLayout::byNODES)
|
||||
{
|
||||
y(qx, qy, qz, c, e) = u;
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -192,14 +245,431 @@ static void Values3D(const int NE,
|
||||
});
|
||||
}
|
||||
|
||||
// Template compute kernel for Values in 3D: tensor product version.
|
||||
template <QVectorLayout Q_LAYOUT, int T_VDIM = 0, int T_D1D = 0, int T_Q1D = 0>
|
||||
static void Values3D(const int NE, const real_t *b_, const real_t *x_,
|
||||
real_t *y_, const int vdim = 0, const int d1d = 0,
|
||||
const int q1d = 0)
|
||||
{
|
||||
return ImplValues3D<Q_LAYOUT, false, T_VDIM, T_D1D, T_Q1D>(
|
||||
NE, b_, nullptr, x_, y_, vdim, d1d, q1d);
|
||||
}
|
||||
|
||||
template <bool Integral>
|
||||
void ImplEval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags);
|
||||
|
||||
inline void Eval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom, const DofToQuad &maps,
|
||||
const Vector &e_vec, Vector &q_val, Vector &q_der, Vector &q_det,
|
||||
const int eval_flags)
|
||||
{
|
||||
ImplEval1D<false>(NE, vdim, q_layout, nullptr, geom, maps, e_vec, q_val,
|
||||
q_der, q_det, eval_flags);
|
||||
}
|
||||
|
||||
// Template compute kernel for 2D quadrature interpolation:
|
||||
// * non-tensor product version,
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template <bool Integral, const int T_VDIM, const int T_ND, const int T_NQ>
|
||||
static void ImplEval2D(const int NE, const int vdim,
|
||||
const QVectorLayout q_layout, const real_t *detJ_,
|
||||
const GeometricFactors *geom, const DofToQuad &maps,
|
||||
const Vector &e_vec, Vector &q_val, Vector &q_der,
|
||||
Vector &q_det, const int eval_flags)
|
||||
{
|
||||
using QI = QuadratureInterpolator;
|
||||
|
||||
const int nd = maps.ndof;
|
||||
const int nq = maps.nqpt;
|
||||
const int ND = T_ND ? T_ND : nd;
|
||||
const int NQ = T_NQ ? T_NQ : nq;
|
||||
const int NMAX = NQ > ND ? NQ : ND;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
MFEM_ASSERT(maps.mode == DofToQuad::FULL, "internal error");
|
||||
MFEM_ASSERT(!geom || geom->mesh->SpaceDimension() == 2, "");
|
||||
MFEM_VERIFY(ND <= QI::MAX_ND2D, "");
|
||||
MFEM_VERIFY(NQ <= QI::MAX_NQ2D, "");
|
||||
if constexpr(Integral)
|
||||
{
|
||||
MFEM_VERIFY(!(eval_flags & (QI::DERIVATIVES | QI::PHYSICAL_DERIVATIVES |
|
||||
QI::DETERMINANTS)),
|
||||
"Integral FE does not support computing derivatives");
|
||||
}
|
||||
const auto B = Reshape(maps.B.Read(), NQ, ND);
|
||||
const auto G = Reshape(maps.G.Read(), NQ, 2, ND);
|
||||
const auto J = Reshape(geom ? geom->J.Read() : nullptr, NQ, 2, 2, NE);
|
||||
const auto E_ = e_vec.Read();
|
||||
auto val = q_layout == QVectorLayout::byNODES ?
|
||||
Reshape(q_val.Write(), NQ, VDIM, NE):
|
||||
Reshape(q_val.Write(), VDIM, NQ, NE);
|
||||
auto der = q_layout == QVectorLayout::byNODES ?
|
||||
Reshape(q_der.Write(), NQ, VDIM, 2, NE):
|
||||
Reshape(q_der.Write(), VDIM, 2, NQ, NE);
|
||||
auto det = Reshape(q_det.Write(), NQ, NE);
|
||||
mfem::forall_2D(NE, NMAX, 1, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
const auto E = Reshape(E_, ND, VDIM, NE);
|
||||
const auto detJ = Reshape(detJ_, NQ, NE);
|
||||
const int ND = T_ND ? T_ND : nd;
|
||||
const int NQ = T_NQ ? T_NQ : nq;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
constexpr int max_ND = T_ND ? T_ND : QI::MAX_ND2D;
|
||||
constexpr int max_VDIM = T_VDIM ? T_VDIM : QI::MAX_VDIM2D;
|
||||
MFEM_SHARED real_t s_E[max_VDIM*max_ND];
|
||||
MFEM_FOREACH_THREAD(d, x, ND)
|
||||
{
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
s_E[c + d * VDIM] = E(d, c, e);
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD(q, x, NQ)
|
||||
{
|
||||
if (eval_flags & (QI::VALUES | QI::PHYSICAL_VALUES))
|
||||
{
|
||||
real_t ed[max_VDIM];
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
ed[c] = 0.0;
|
||||
}
|
||||
for (int d = 0; d < ND; ++d)
|
||||
{
|
||||
const real_t b = B(q,d);
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
ed[c] += b * s_E[c + d * VDIM];
|
||||
}
|
||||
}
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
if constexpr (Integral)
|
||||
{
|
||||
ed[c] /= detJ(q, e);
|
||||
}
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
val(c, q, e) = ed[c];
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
val(q, c, e) = ed[c];
|
||||
}
|
||||
}
|
||||
}
|
||||
if ((eval_flags & QI::DERIVATIVES) ||
|
||||
(eval_flags & QI::PHYSICAL_DERIVATIVES) ||
|
||||
(eval_flags & QI::DETERMINANTS))
|
||||
{
|
||||
// use MAX_VDIM2D to avoid "subscript out of range" warnings
|
||||
real_t D[QI::MAX_VDIM2D*2];
|
||||
for (int i = 0; i < 2*VDIM; i++)
|
||||
{
|
||||
D[i] = 0.0;
|
||||
}
|
||||
for (int d = 0; d < ND; ++d)
|
||||
{
|
||||
const real_t wx = G(q,0,d);
|
||||
const real_t wy = G(q,1,d);
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
real_t s_e = s_E[c+d*VDIM];
|
||||
D[c+VDIM*0] += s_e * wx;
|
||||
D[c+VDIM*1] += s_e * wy;
|
||||
}
|
||||
}
|
||||
if (eval_flags & QI::DERIVATIVES)
|
||||
{
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
der(c,0,q,e) = D[c+VDIM*0];
|
||||
der(c,1,q,e) = D[c+VDIM*1];
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
der(q,c,0,e) = D[c+VDIM*0];
|
||||
der(q,c,1,e) = D[c+VDIM*1];
|
||||
}
|
||||
}
|
||||
}
|
||||
if (eval_flags & QI::PHYSICAL_DERIVATIVES)
|
||||
{
|
||||
real_t Jloc[4], Jinv[4];
|
||||
Jloc[0] = J(q,0,0,e);
|
||||
Jloc[1] = J(q,1,0,e);
|
||||
Jloc[2] = J(q,0,1,e);
|
||||
Jloc[3] = J(q,1,1,e);
|
||||
kernels::CalcInverse<2>(Jloc, Jinv);
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
const real_t u = D[c+VDIM*0];
|
||||
const real_t v = D[c+VDIM*1];
|
||||
const real_t JiU = Jinv[0]*u + Jinv[1]*v;
|
||||
const real_t JiV = Jinv[2]*u + Jinv[3]*v;
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
der(c,0,q,e) = JiU;
|
||||
der(c,1,q,e) = JiV;
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
der(q,c,0,e) = JiU;
|
||||
der(q,c,1,e) = JiV;
|
||||
}
|
||||
}
|
||||
}
|
||||
if (eval_flags & QI::DETERMINANTS)
|
||||
{
|
||||
if (VDIM == 2)
|
||||
{
|
||||
det(q, e) = kernels::Det<2>(D);
|
||||
}
|
||||
else
|
||||
{
|
||||
DeviceTensor<2> j(D, 3, 2);
|
||||
const real_t dE = j(0,0)*j(0,0) + j(1,0)*j(1,0) + j(2,0)*j(2,0);
|
||||
const real_t dF = j(0,0)*j(0,1) + j(1,0)*j(1,1) + j(2,0)*j(2,1);
|
||||
const real_t dG = j(0,1)*j(0,1) + j(1,1)*j(1,1) + j(2,1)*j(2,1);
|
||||
det(q,e) = std::sqrt(dE*dG - dF*dF);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
// Template compute kernel for 2D quadrature interpolation:
|
||||
// * non-tensor product version,
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template <const int T_VDIM, const int T_ND, const int T_NQ>
|
||||
static void Eval2D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom, const DofToQuad &maps,
|
||||
const Vector &e_vec, Vector &q_val, Vector &q_der,
|
||||
Vector &q_det, const int eval_flags)
|
||||
{
|
||||
ImplEval2D<false, T_VDIM, T_ND, T_NQ>(NE, vdim, q_layout, nullptr, geom,
|
||||
maps, e_vec, q_val, q_der, q_det,
|
||||
eval_flags);
|
||||
}
|
||||
|
||||
// Template compute kernel for 3D quadrature interpolation:
|
||||
// * non-tensor product version,
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template <bool Integral, const int T_VDIM, const int T_ND, const int T_NQ>
|
||||
static void ImplEval3D(const int NE, const int vdim,
|
||||
const QVectorLayout q_layout, const real_t *detJ_,
|
||||
const GeometricFactors *geom, const DofToQuad &maps,
|
||||
const Vector &e_vec, Vector &q_val, Vector &q_der,
|
||||
Vector &q_det, const int eval_flags)
|
||||
{
|
||||
using QI = QuadratureInterpolator;
|
||||
|
||||
const int nd = maps.ndof;
|
||||
const int nq = maps.nqpt;
|
||||
const int ND = T_ND ? T_ND : nd;
|
||||
const int NQ = T_NQ ? T_NQ : nq;
|
||||
const int NMAX = NQ > ND ? NQ : ND;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
MFEM_ASSERT(maps.mode == DofToQuad::FULL, "internal error");
|
||||
MFEM_ASSERT(!geom || geom->mesh->SpaceDimension() == 3, "");
|
||||
MFEM_VERIFY(ND <= QI::MAX_ND3D, "");
|
||||
MFEM_VERIFY(NQ <= QI::MAX_NQ3D, "");
|
||||
MFEM_VERIFY(VDIM == 3 || !(eval_flags & QI::DETERMINANTS), "");
|
||||
if constexpr(Integral)
|
||||
{
|
||||
MFEM_VERIFY(!(eval_flags & (QI::DERIVATIVES | QI::PHYSICAL_DERIVATIVES |
|
||||
QI::DETERMINANTS)),
|
||||
"Integral FE does not support computing derivatives");
|
||||
}
|
||||
const auto B = Reshape(maps.B.Read(), NQ, ND);
|
||||
const auto G = Reshape(maps.G.Read(), NQ, 3, ND);
|
||||
const auto J = Reshape(geom ? geom->J.Read() : nullptr, NQ, 3, 3, NE);
|
||||
auto E_ = e_vec.Read();
|
||||
auto val = q_layout == QVectorLayout::byNODES ?
|
||||
Reshape(q_val.Write(), NQ, VDIM, NE):
|
||||
Reshape(q_val.Write(), VDIM, NQ, NE);
|
||||
auto der = q_layout == QVectorLayout::byNODES ?
|
||||
Reshape(q_der.Write(), NQ, VDIM, 3, NE):
|
||||
Reshape(q_der.Write(), VDIM, 3, NQ, NE);
|
||||
auto det = Reshape(q_det.Write(), NQ, NE);
|
||||
mfem::forall_2D(NE, NMAX, 1, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
const auto E = Reshape(E_, ND, VDIM, NE);
|
||||
const auto detJ = Reshape(detJ_, NQ, NE);
|
||||
const int ND = T_ND ? T_ND : nd;
|
||||
const int NQ = T_NQ ? T_NQ : nq;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
constexpr int max_ND = T_ND ? T_ND : QI::MAX_ND3D;
|
||||
constexpr int max_VDIM = T_VDIM ? T_VDIM : QI::MAX_VDIM3D;
|
||||
MFEM_SHARED real_t s_E[max_VDIM*max_ND];
|
||||
MFEM_FOREACH_THREAD(d, x, ND)
|
||||
{
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
s_E[c + d * VDIM] = E(d, c, e);
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD(q, x, NQ)
|
||||
{
|
||||
if (eval_flags & (QI::VALUES | QI::PHYSICAL_VALUES))
|
||||
{
|
||||
real_t ed[max_VDIM];
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
ed[c] = 0.0;
|
||||
}
|
||||
for (int d = 0; d < ND; ++d)
|
||||
{
|
||||
const real_t b = B(q,d);
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
ed[c] += b * s_E[c + d * VDIM];
|
||||
}
|
||||
}
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
if constexpr (Integral)
|
||||
{
|
||||
ed[c] /= detJ(q, e);
|
||||
}
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
val(c, q, e) = ed[c];
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
val(q, c, e) = ed[c];
|
||||
}
|
||||
}
|
||||
}
|
||||
if ((eval_flags & QI::DERIVATIVES) ||
|
||||
(eval_flags & QI::PHYSICAL_DERIVATIVES) ||
|
||||
(eval_flags & QI::DETERMINANTS))
|
||||
{
|
||||
// use MAX_VDIM3D to avoid "subscript out of range" warnings
|
||||
real_t D[QI::MAX_VDIM3D*3];
|
||||
for (int i = 0; i < 3*VDIM; i++)
|
||||
{
|
||||
D[i] = 0.0;
|
||||
}
|
||||
for (int d = 0; d < ND; ++d)
|
||||
{
|
||||
const real_t wx = G(q,0,d);
|
||||
const real_t wy = G(q,1,d);
|
||||
const real_t wz = G(q,2,d);
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
real_t s_e = s_E[c+d*VDIM];
|
||||
D[c+VDIM*0] += s_e * wx;
|
||||
D[c+VDIM*1] += s_e * wy;
|
||||
D[c+VDIM*2] += s_e * wz;
|
||||
}
|
||||
}
|
||||
if (eval_flags & QI::DERIVATIVES)
|
||||
{
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
der(c,0,q,e) = D[c+VDIM*0];
|
||||
der(c,1,q,e) = D[c+VDIM*1];
|
||||
der(c,2,q,e) = D[c+VDIM*2];
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
der(q,c,0,e) = D[c+VDIM*0];
|
||||
der(q,c,1,e) = D[c+VDIM*1];
|
||||
der(q,c,2,e) = D[c+VDIM*2];
|
||||
}
|
||||
}
|
||||
}
|
||||
if (eval_flags & QI::PHYSICAL_DERIVATIVES)
|
||||
{
|
||||
real_t Jloc[9], Jinv[9];
|
||||
for (int col = 0; col < 3; col++)
|
||||
{
|
||||
for (int row = 0; row < 3; row++)
|
||||
{
|
||||
Jloc[row+3*col] = J(q,row,col,e);
|
||||
}
|
||||
}
|
||||
kernels::CalcInverse<3>(Jloc, Jinv);
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
const real_t u = D[c+VDIM*0];
|
||||
const real_t v = D[c+VDIM*1];
|
||||
const real_t w = D[c+VDIM*2];
|
||||
const real_t JiU = Jinv[0]*u + Jinv[1]*v + Jinv[2]*w;
|
||||
const real_t JiV = Jinv[3]*u + Jinv[4]*v + Jinv[5]*w;
|
||||
const real_t JiW = Jinv[6]*u + Jinv[7]*v + Jinv[8]*w;
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
der(c,0,q,e) = JiU;
|
||||
der(c,1,q,e) = JiV;
|
||||
der(c,2,q,e) = JiW;
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
der(q,c,0,e) = JiU;
|
||||
der(q,c,1,e) = JiV;
|
||||
der(q,c,2,e) = JiW;
|
||||
}
|
||||
}
|
||||
}
|
||||
if (VDIM == 3 && (eval_flags & QI::DETERMINANTS))
|
||||
{
|
||||
// The check (VDIM == 3) should eliminate this block when VDIM is
|
||||
// known at compile time and (VDIM != 3).
|
||||
det(q,e) = kernels::Det<3>(D);
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
// Template compute kernel for 3D quadrature interpolation:
|
||||
// * non-tensor product version,
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template <const int T_VDIM, const int T_ND, const int T_NQ>
|
||||
static void Eval3D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom, const DofToQuad &maps,
|
||||
const Vector &e_vec, Vector &q_val, Vector &q_der,
|
||||
Vector &q_det, const int eval_flags)
|
||||
{
|
||||
ImplEval3D<false, T_VDIM, T_ND, T_NQ>(NE, vdim, q_layout, nullptr, geom,
|
||||
maps, e_vec, q_val, q_der, q_det,
|
||||
eval_flags);
|
||||
}
|
||||
|
||||
} // namespace quadrature_interpolator
|
||||
|
||||
} // namespace internal
|
||||
|
||||
/// @cond Suppress_Doxygen_warnings
|
||||
|
||||
template<int DIM, QVectorLayout Q_LAYOUT,
|
||||
int VDIM, int D1D, int Q1D, int NBZ>
|
||||
template <int DIM, QVectorLayout Q_LAYOUT, int VDIM, int D1D, int Q1D, int NBZ>
|
||||
QuadratureInterpolator::IntTensorEvalKernelType
|
||||
QuadratureInterpolator::IntTensorEvalKernels::Kernel()
|
||||
{
|
||||
if constexpr (DIM == 1) { return internal::quadrature_interpolator::ImplValues1D<Q_LAYOUT, true>; }
|
||||
else if constexpr (DIM == 2) { return internal::quadrature_interpolator::ImplValues2D<Q_LAYOUT, true, VDIM, D1D, Q1D, NBZ>; }
|
||||
else if constexpr (DIM == 3) { return internal::quadrature_interpolator::ImplValues3D<Q_LAYOUT, true, VDIM, D1D, Q1D>; }
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
template <int DIM, QVectorLayout Q_LAYOUT, int VDIM, int D1D, int Q1D, int NBZ>
|
||||
QuadratureInterpolator::TensorEvalKernelType
|
||||
QuadratureInterpolator::TensorEvalKernels::Kernel()
|
||||
{
|
||||
@@ -209,6 +679,28 @@ QuadratureInterpolator::TensorEvalKernels::Kernel()
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
template <int DIM, int VDIM, int ND, int NQ>
|
||||
QuadratureInterpolator::IntEvalKernelType
|
||||
QuadratureInterpolator::IntEvalKernels::Kernel()
|
||||
{
|
||||
using namespace internal::quadrature_interpolator;
|
||||
if constexpr (DIM == 1) { return ImplEval1D<true>; }
|
||||
else if constexpr (DIM == 2) { return ImplEval2D<true,VDIM,ND,NQ>; }
|
||||
else if constexpr (DIM == 3) { return ImplEval3D<true,VDIM,ND,NQ>; }
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
template <int DIM, int VDIM, int ND, int NQ>
|
||||
QuadratureInterpolator::EvalKernelType
|
||||
QuadratureInterpolator::EvalKernels::Kernel()
|
||||
{
|
||||
using namespace internal::quadrature_interpolator;
|
||||
if constexpr (DIM == 1) { return Eval1D; }
|
||||
else if constexpr (DIM == 2) { return Eval2D<VDIM,ND,NQ>; }
|
||||
else if constexpr (DIM == 3) { return Eval3D<VDIM,ND,NQ>; }
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
/// @endcond
|
||||
|
||||
} // namespace mfem
|
||||
|
||||
@@ -21,63 +21,105 @@ namespace quadrature_interpolator
|
||||
|
||||
void InitEvalByNodesKernels()
|
||||
{
|
||||
using k = QuadratureInterpolator::TensorEvalKernels;
|
||||
|
||||
// 2D
|
||||
k::Specialization<2,QVectorLayout::byNODES,1,3,3>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,1,2,4>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,1,3,2>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,1,3,4>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,1,3,6>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,1,4,3>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,1,4,4>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 1, 3, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 1, 2, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 1, 3, 2, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 1, 3, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 1, 3, 6, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 1, 4, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 1, 4, 4, 1>();
|
||||
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,2,2>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,2,3>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,2,4>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,2,5>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,2,6>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 2, 2, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 2, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 2, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 2, 5, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 2, 6, 1>();
|
||||
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,3,3>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,3,4>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,3,6>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 3, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 3, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 3, 6, 1>();
|
||||
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,4,3>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,4,4>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,4,5>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,4,6>::Opt<1>::Add();
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,4,7>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 4, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 4, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 4, 5, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 4, 6, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 4, 7, 1>();
|
||||
|
||||
k::Specialization<2,QVectorLayout::byNODES,2,5,6>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byNODES, 2, 5, 6, 1>();
|
||||
|
||||
// 3D
|
||||
k::Specialization<3,QVectorLayout::byNODES,1,2,4>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,1,3,3>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,1,3,4>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,1,3,6>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,1,4,3>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,1,4,4>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,1,4,8>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 1, 2, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 1, 3, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 1, 3, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 1, 3, 6, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 1, 4, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 1, 4, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 1, 4, 8, 1>();
|
||||
|
||||
k::Specialization<3,QVectorLayout::byNODES,2,2,2>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,2,2,3>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,2,3,4>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 2, 2, 2, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 2, 2, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 2, 3, 4, 1>();
|
||||
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,2,3>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,2,4>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,2,5>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,2,6>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 2, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 2, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 2, 5, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 2, 6, 1>();
|
||||
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,3,3>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,3,4>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,3,5>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,3,6>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 3, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 3, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 3, 5, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 3, 6, 1>();
|
||||
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,4,3>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,4,4>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,4,6>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,4,7>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byNODES,3,4,8>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 4, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 4, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 4, 6, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 4, 7, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byNODES, 3, 4, 8, 1>();
|
||||
}
|
||||
|
||||
} // namespace quadrature_interpolator
|
||||
|
||||
@@ -21,36 +21,59 @@ namespace quadrature_interpolator
|
||||
|
||||
void InitEvalByVDimKernels()
|
||||
{
|
||||
using k = QuadratureInterpolator::TensorEvalKernels;
|
||||
// 2D
|
||||
k::Specialization<2,QVectorLayout::byVDIM,1,2,4>::Opt<8>::Add();
|
||||
k::Specialization<2,QVectorLayout::byVDIM,1,3,6>::Opt<4>::Add();
|
||||
k::Specialization<2,QVectorLayout::byVDIM,1,4,8>::Opt<2>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byVDIM, 1, 2, 4, 8>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byVDIM, 1, 3, 6, 4>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byVDIM, 1, 4, 8, 2>();
|
||||
|
||||
k::Specialization<2,QVectorLayout::byVDIM,2,2,4>::Opt<8>::Add();
|
||||
k::Specialization<2,QVectorLayout::byVDIM,2,3,4>::Opt<8>::Add();
|
||||
k::Specialization<2,QVectorLayout::byVDIM,2,3,6>::Opt<4>::Add();
|
||||
k::Specialization<2,QVectorLayout::byVDIM,2,4,6>::Opt<2>::Add();
|
||||
k::Specialization<2,QVectorLayout::byVDIM,2,4,8>::Opt<2>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byVDIM, 2, 2, 4, 8>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byVDIM, 2, 3, 4, 8>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byVDIM, 2, 3, 6, 4>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byVDIM, 2, 4, 6, 2>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
2, QVectorLayout::byVDIM, 2, 4, 8, 2>();
|
||||
// 3D
|
||||
k::Specialization<3,QVectorLayout::byVDIM,1,2,4>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,1,3,6>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,1,4,8>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,2,4>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,3,6>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,4,8>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 1, 2, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 1, 3, 6, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 1, 4, 8, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 2, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 3, 6, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 4, 8, 1>();
|
||||
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,2,2>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,3,3>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,4,4>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,5,5>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,6,6>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,7,7>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,8,8>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,9,9>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 2, 2, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 3, 3, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 4, 4, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 5, 5, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 6, 6, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 7, 7, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 8, 8, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 9, 9, 1>();
|
||||
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,4,6>::Opt<1>::Add();
|
||||
k::Specialization<3,QVectorLayout::byVDIM,3,3,4>::Opt<1>::Add();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 4, 6, 1>();
|
||||
QuadratureInterpolator::AddTensorEvalSpecializations<
|
||||
3, QVectorLayout::byVDIM, 3, 3, 4, 1>();
|
||||
}
|
||||
|
||||
} // namespace quadrature_interpolator
|
||||
|
||||
@@ -268,8 +268,9 @@ static void Derivatives3D(const int NE,
|
||||
DeviceMatrix B(BG[0], D1D, Q1D);
|
||||
DeviceMatrix G(BG[1], D1D, Q1D);
|
||||
|
||||
MFEM_SHARED real_t sm0[3][MQ1*MQ1*MQ1];
|
||||
MFEM_SHARED real_t sm1[3][MQ1*MQ1*MQ1];
|
||||
constexpr int MDQ = MD1 > MQ1 ? MD1 : MQ1;
|
||||
MFEM_SHARED real_t sm0[3][MD1*MD1*MDQ];
|
||||
MFEM_SHARED real_t sm1[3][MD1*MQ1*MQ1];
|
||||
DeviceTensor<3> X(sm0[2], D1D, D1D, D1D);
|
||||
DeviceTensor<3> DDQ0(sm0[0], D1D, D1D, Q1D);
|
||||
DeviceTensor<3> DDQ1(sm0[1], D1D, D1D, Q1D);
|
||||
|
||||
@@ -22,74 +22,71 @@ namespace quadrature_interpolator
|
||||
template <bool P>
|
||||
void InitGradByNodesKernels()
|
||||
{
|
||||
using k = QuadratureInterpolator::GradKernels;
|
||||
constexpr auto L = QVectorLayout::byNODES;
|
||||
// 2D
|
||||
k::Specialization<2,L,P,1,3,3>::template Opt<16>::Add();
|
||||
k::Specialization<2,L,P,1,3,4>::template Opt<16>::Add();
|
||||
k::Specialization<2,L,P,1,4,3>::template Opt<16>::Add();
|
||||
k::Specialization<2,L,P,1,4,4>::template Opt<16>::Add();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,1,3,3,16>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,1,3,4,16>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,1,4,3,16>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,1,4,4,16>();
|
||||
|
||||
k::Specialization<2,L,P,2,2,2>::template Opt<16>::Add();
|
||||
k::Specialization<2,L,P,2,2,3>::template Opt<8>::Add();
|
||||
k::Specialization<2,L,P,2,2,4>::template Opt<4>::Add();
|
||||
k::Specialization<2,L,P,2,2,5>::template Opt<4>::Add();
|
||||
k::Specialization<2,L,P,2,2,6>::template Opt<2>::Add();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,2,2,16>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,2,3,8>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,2,4,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,2,5,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,2,6,2>();
|
||||
|
||||
k::Specialization<2,L,P,2,3,3>::template Opt<2>::Add();
|
||||
k::Specialization<2,L,P,2,3,4>::template Opt<4>::Add();
|
||||
k::Specialization<2,L,P,2,4,3>::template Opt<4>::Add();
|
||||
k::Specialization<2,L,P,2,3,6>::template Opt<2>::Add();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,3,3,2>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,3,4,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,4,3,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,3,6,2>();
|
||||
|
||||
k::Specialization<2,L,P,2,4,4>::template Opt<2>::Add();
|
||||
k::Specialization<2,L,P,2,4,5>::template Opt<2>::Add();
|
||||
k::Specialization<2,L,P,2,4,6>::template Opt<2>::Add();
|
||||
k::Specialization<2,L,P,2,4,7>::template Opt<2>::Add();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,4,4,2>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,4,5,2>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,4,6,2>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,4,7,2>();
|
||||
|
||||
k::Specialization<2,L,P,2,5,6>::template Opt<2>::Add();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,5,6,2>();
|
||||
// 3D
|
||||
k::Specialization<3,L,P,1,2,4>::Add();
|
||||
k::Specialization<3,L,P,1,3,3>::Add();
|
||||
k::Specialization<3,L,P,1,3,4>::Add();
|
||||
k::Specialization<3,L,P,1,3,6>::Add();
|
||||
k::Specialization<3,L,P,1,4,4>::Add();
|
||||
k::Specialization<3,L,P,1,4,8>::Add();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,1,2,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,1,3,3>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,1,3,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,1,3,6>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,1,4,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,1,4,8>();
|
||||
|
||||
k::Specialization<3,L,P,3,2,3>::Add();
|
||||
k::Specialization<3,L,P,3,2,4>::Add();
|
||||
k::Specialization<3,L,P,3,2,5>::Add();
|
||||
k::Specialization<3,L,P,3,2,6>::Add();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,2,3>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,2,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,2,5>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,2,6>();
|
||||
|
||||
k::Specialization<3,L,P,3,3,3>::Add();
|
||||
k::Specialization<3,L,P,3,3,4>::Add();
|
||||
k::Specialization<3,L,P,3,3,5>::Add();
|
||||
k::Specialization<3,L,P,3,3,6>::Add();
|
||||
k::Specialization<3,L,P,3,4,4>::Add();
|
||||
k::Specialization<3,L,P,3,4,6>::Add();
|
||||
k::Specialization<3,L,P,3,4,7>::Add();
|
||||
k::Specialization<3,L,P,3,4,8>::Add();
|
||||
|
||||
using k2 = QuadratureInterpolator::CollocatedGradKernels;
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,3,3>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,3,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,3,5>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,3,6>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,4,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,4,6>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,4,7>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,4,8>();
|
||||
|
||||
// 2D
|
||||
k2::Specialization<2,L,P,1,2>::template Opt<16>::Add();
|
||||
k2::Specialization<2,L,P,1,3>::template Opt<16>::Add();
|
||||
k2::Specialization<2,L,P,1,4>::template Opt<16>::Add();
|
||||
k2::Specialization<2,L,P,2,2>::template Opt<16>::Add();
|
||||
k2::Specialization<2,L,P,2,3>::template Opt<4>::Add();
|
||||
k2::Specialization<2,L,P,2,4>::template Opt<2>::Add();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,1,2,16>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,1,3,16>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,1,4,16>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,2,2,16>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,2,3,4>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,2,4,2>();
|
||||
|
||||
k2::Specialization<3,L,P,1,2>::Add();
|
||||
k2::Specialization<3,L,P,1,3>::Add();
|
||||
k2::Specialization<3,L,P,1,4>::Add();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,1,2>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,1,3>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,1,4>();
|
||||
|
||||
k2::Specialization<3,L,P,2,2>::Add();
|
||||
k2::Specialization<3,L,P,2,3>::Add();
|
||||
k2::Specialization<3,L,P,2,4>::Add();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,2,2>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,2,3>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,2,4>();
|
||||
|
||||
k2::Specialization<3,L,P,3,2>::Add();
|
||||
k2::Specialization<3,L,P,3,3>::Add();
|
||||
k2::Specialization<3,L,P,3,4>::Add();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,3,2>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,3,3>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,3,4>();
|
||||
}
|
||||
|
||||
template void InitGradByNodesKernels<true>();
|
||||
|
||||
@@ -22,47 +22,45 @@ namespace quadrature_interpolator
|
||||
template <bool P>
|
||||
void InitGradByVDimKernels()
|
||||
{
|
||||
using k = QuadratureInterpolator::GradKernels;
|
||||
constexpr auto L = QVectorLayout::byVDIM;
|
||||
// 2D
|
||||
k::Specialization<2,L,P,1,3,4>::template Opt<8>::Add();
|
||||
k::Specialization<2,L,P,1,4,6>::template Opt<4>::Add();
|
||||
k::Specialization<2,L,P,1,5,8>::template Opt<2>::Add();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,1,3,4,8>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,1,4,6,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,1,5,8,2>();
|
||||
|
||||
k::Specialization<2,L,P,2,3,3>::template Opt<8>::Add();
|
||||
k::Specialization<2,L,P,2,3,4>::template Opt<8>::Add();
|
||||
k::Specialization<2,L,P,2,4,6>::template Opt<4>::Add();
|
||||
k::Specialization<2,L,P,2,5,8>::template Opt<2>::Add();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,3,3,8>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,3,4,8>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,4,6,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<2,L,P,2,5,8,2>();
|
||||
// 3D
|
||||
k::Specialization<3,L,P,1,3,4>::Add();
|
||||
k::Specialization<3,L,P,1,4,6>::Add();
|
||||
k::Specialization<3,L,P,1,5,8>::Add();
|
||||
k::Specialization<3,L,P,3,3,4>::Add();
|
||||
k::Specialization<3,L,P,3,4,6>::Add();
|
||||
k::Specialization<3,L,P,3,5,8>::Add();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,1,3,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,1,4,6>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,1,5,8>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,3,4>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,4,6>();
|
||||
QuadratureInterpolator::AddGradSpecializations<3,L,P,3,5,8>();
|
||||
|
||||
using k2 = QuadratureInterpolator::CollocatedGradKernels;
|
||||
// 2D
|
||||
k2::Specialization<2,L,P,1,2>::template Opt<16>::Add();
|
||||
k2::Specialization<2,L,P,1,3>::template Opt<16>::Add();
|
||||
k2::Specialization<2,L,P,1,4>::template Opt<16>::Add();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,1,2,16>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,1,3,16>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,1,4,16>();
|
||||
|
||||
k2::Specialization<2,L,P,2,2>::template Opt<16>::Add();
|
||||
k2::Specialization<2,L,P,2,3>::template Opt<4>::Add();
|
||||
k2::Specialization<2,L,P,2,4>::template Opt<2>::Add();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,2,2,16>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,2,3,4>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<2,L,P,2,4,2>();
|
||||
|
||||
// 3D
|
||||
k2::Specialization<3,L,P,1,2>::Add();
|
||||
k2::Specialization<3,L,P,1,3>::Add();
|
||||
k2::Specialization<3,L,P,1,4>::Add();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,1,2>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,1,3>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,1,4>();
|
||||
|
||||
k2::Specialization<3,L,P,2,2>::Add();
|
||||
k2::Specialization<3,L,P,2,3>::Add();
|
||||
k2::Specialization<3,L,P,2,4>::Add();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,2,2>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,2,3>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,2,4>();
|
||||
|
||||
k2::Specialization<3,L,P,3,2>::Add();
|
||||
k2::Specialization<3,L,P,3,3>::Add();
|
||||
k2::Specialization<3,L,P,3,4>::Add();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,3,2>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,3,3>();
|
||||
QuadratureInterpolator::AddCollocatedGradSpecializations<3,L,P,3,4>();
|
||||
}
|
||||
|
||||
template void InitGradByVDimKernels<true>();
|
||||
|
||||
+352
-466
@@ -69,8 +69,9 @@ QuadratureInterpolator::QuadratureInterpolator(const FiniteElementSpace &fes,
|
||||
|
||||
d_buffer.UseDevice(true);
|
||||
if (fespace->GetNE() == 0) { return; }
|
||||
MFEM_VERIFY(SupportsFESpace(fes),
|
||||
"Only elements with MapType VALUE and H_DIV are supported!");
|
||||
MFEM_VERIFY(
|
||||
SupportsFESpace(fes),
|
||||
"Only elements with MapType VALUE, INTEGRAL, or H_DIV are supported!");
|
||||
}
|
||||
|
||||
QuadratureInterpolator::QuadratureInterpolator(const FiniteElementSpace &fes,
|
||||
@@ -84,8 +85,9 @@ QuadratureInterpolator::QuadratureInterpolator(const FiniteElementSpace &fes,
|
||||
{
|
||||
d_buffer.UseDevice(true);
|
||||
if (fespace->GetNE() == 0) { return; }
|
||||
MFEM_VERIFY(SupportsFESpace(fes),
|
||||
"Only elements with MapType VALUE and H_DIV are supported!");
|
||||
MFEM_VERIFY(
|
||||
SupportsFESpace(fes),
|
||||
"Only elements with MapType VALUE, INTEGRAL, or H_DIV are supported!");
|
||||
}
|
||||
|
||||
bool QuadratureInterpolator::SupportsFESpace(const FiniteElementSpace &fespace)
|
||||
@@ -93,9 +95,9 @@ bool QuadratureInterpolator::SupportsFESpace(const FiniteElementSpace &fespace)
|
||||
const FiniteElement *fe = fespace.GetTypicalFE();
|
||||
const Mesh &mesh = *fespace.GetMesh();
|
||||
return (fe->GetMapType() == FiniteElement::MapType::VALUE ||
|
||||
fe->GetMapType() == FiniteElement::MapType::H_DIV)
|
||||
&& (!fespace.IsVariableOrder())
|
||||
&& (!mesh.IsMixedMesh());
|
||||
fe->GetMapType() == FiniteElement::MapType::INTEGRAL ||
|
||||
fe->GetMapType() == FiniteElement::MapType::H_DIV) &&
|
||||
(!fespace.IsVariableOrder()) && (!mesh.IsMixedMesh());
|
||||
}
|
||||
|
||||
namespace internal
|
||||
@@ -108,16 +110,11 @@ namespace quadrature_interpolator
|
||||
// * non-tensor product version,
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
static void Eval1D(const int NE,
|
||||
const int vdim,
|
||||
const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom,
|
||||
const DofToQuad &maps,
|
||||
const Vector &e_vec,
|
||||
Vector &q_val,
|
||||
Vector &q_der,
|
||||
Vector &q_det,
|
||||
const int eval_flags)
|
||||
template <bool Integral>
|
||||
void ImplEval1D(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ_, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags)
|
||||
{
|
||||
using QI = QuadratureInterpolator;
|
||||
|
||||
@@ -126,13 +123,16 @@ static void Eval1D(const int NE,
|
||||
MFEM_ASSERT(maps.mode == DofToQuad::FULL, "internal error");
|
||||
MFEM_ASSERT(!geom || geom->mesh->SpaceDimension() == 1, "");
|
||||
MFEM_VERIFY(vdim == 1 || !(eval_flags & QI::DETERMINANTS), "");
|
||||
MFEM_VERIFY(bool(geom) == bool(eval_flags & QI::PHYSICAL_DERIVATIVES),
|
||||
"'geom' must be given (non-null) only when evaluating physical"
|
||||
" derivatives");
|
||||
const auto B = Reshape(maps.B.Read(), nq, nd);
|
||||
const auto G = Reshape(maps.G.Read(), nq, nd);
|
||||
if constexpr(Integral)
|
||||
{
|
||||
MFEM_VERIFY(!(eval_flags & (QI::DERIVATIVES | QI::PHYSICAL_DERIVATIVES |
|
||||
QI::DETERMINANTS)),
|
||||
"Integral FE does not support computing derivatives");
|
||||
}
|
||||
const auto B_ = maps.B.Read();
|
||||
const auto G_ = maps.G.Read();
|
||||
const auto J = Reshape(geom ? geom->J.Read() : nullptr, nq, NE);
|
||||
const auto E = Reshape(e_vec.Read(), nd, vdim, NE);
|
||||
const auto E_ = e_vec.Read();
|
||||
auto val = q_layout == QVectorLayout::byNODES ?
|
||||
Reshape(q_val.Write(), nq, vdim, NE):
|
||||
Reshape(q_val.Write(), vdim, nq, NE);
|
||||
@@ -140,8 +140,12 @@ static void Eval1D(const int NE,
|
||||
Reshape(q_der.Write(), nq, vdim, NE):
|
||||
Reshape(q_der.Write(), vdim, nq, NE);
|
||||
auto det = Reshape(q_det.Write(), nq, NE);
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE (int e)
|
||||
mfem::forall(NE, [=] MFEM_HOST_DEVICE(int e)
|
||||
{
|
||||
const auto B = Reshape(B_, nq, nd);
|
||||
const auto G = Reshape(G_, nq, nd);
|
||||
const auto E = Reshape(E_, nd, vdim, NE);
|
||||
const auto detJ = Reshape(detJ_, nq, NE);
|
||||
for (int q = 0; q < nq; ++q)
|
||||
{
|
||||
if (eval_flags & (QI::VALUES | QI::PHYSICAL_VALUES))
|
||||
@@ -151,10 +155,20 @@ static void Eval1D(const int NE,
|
||||
real_t q_val = 0.0;
|
||||
for (int d = 0; d < nd; ++d)
|
||||
{
|
||||
q_val += B(q,d)*E(d,c,e);
|
||||
q_val += B(q, d) * E(d, c, e);
|
||||
}
|
||||
if constexpr (Integral)
|
||||
{
|
||||
q_val /= detJ(q, e);
|
||||
}
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
val(c, q, e) = q_val;
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
val(q, c, e) = q_val;
|
||||
}
|
||||
if (q_layout == QVectorLayout::byVDIM) { val(c,q,e) = q_val; }
|
||||
if (q_layout == QVectorLayout::byNODES) { val(q,c,e) = q_val; }
|
||||
}
|
||||
}
|
||||
if ((eval_flags & QI::DERIVATIVES) ||
|
||||
@@ -166,7 +180,7 @@ static void Eval1D(const int NE,
|
||||
real_t q_d = 0.0;
|
||||
for (int d = 0; d < nd; ++d)
|
||||
{
|
||||
q_d += G(q,d)*E(d,c,e);
|
||||
q_d += G(q, d) * E(d, c, e);
|
||||
}
|
||||
if (eval_flags & QI::PHYSICAL_DERIVATIVES)
|
||||
{
|
||||
@@ -174,8 +188,14 @@ static void Eval1D(const int NE,
|
||||
}
|
||||
if (eval_flags & QI::DERIVATIVES || eval_flags & QI::PHYSICAL_DERIVATIVES)
|
||||
{
|
||||
if (q_layout == QVectorLayout::byVDIM) { der(c,q,e) = q_d; }
|
||||
if (q_layout == QVectorLayout::byNODES) { der(q,c,e) = q_d; }
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
der(c, q, e) = q_d;
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
der(q, c, e) = q_d;
|
||||
}
|
||||
}
|
||||
if (vdim == 1 && (eval_flags & QI::DETERMINANTS))
|
||||
{
|
||||
@@ -187,317 +207,17 @@ static void Eval1D(const int NE,
|
||||
});
|
||||
}
|
||||
|
||||
// Template compute kernel for 2D quadrature interpolation:
|
||||
// * non-tensor product version,
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template<const int T_VDIM, const int T_ND, const int T_NQ>
|
||||
static void Eval2D(const int NE,
|
||||
const int vdim,
|
||||
const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom,
|
||||
const DofToQuad &maps,
|
||||
const Vector &e_vec,
|
||||
Vector &q_val,
|
||||
Vector &q_der,
|
||||
Vector &q_det,
|
||||
const int eval_flags)
|
||||
{
|
||||
using QI = QuadratureInterpolator;
|
||||
template void
|
||||
ImplEval1D<true>(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags);
|
||||
|
||||
const int nd = maps.ndof;
|
||||
const int nq = maps.nqpt;
|
||||
const int ND = T_ND ? T_ND : nd;
|
||||
const int NQ = T_NQ ? T_NQ : nq;
|
||||
const int NMAX = NQ > ND ? NQ : ND;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
MFEM_ASSERT(maps.mode == DofToQuad::FULL, "internal error");
|
||||
MFEM_ASSERT(!geom || geom->mesh->SpaceDimension() == 2, "");
|
||||
MFEM_VERIFY(ND <= QI::MAX_ND2D, "");
|
||||
MFEM_VERIFY(NQ <= QI::MAX_NQ2D, "");
|
||||
MFEM_VERIFY(bool(geom) == bool(eval_flags & QI::PHYSICAL_DERIVATIVES),
|
||||
"'geom' must be given (non-null) only when evaluating physical"
|
||||
" derivatives");
|
||||
const auto B = Reshape(maps.B.Read(), NQ, ND);
|
||||
const auto G = Reshape(maps.G.Read(), NQ, 2, ND);
|
||||
const auto J = Reshape(geom ? geom->J.Read() : nullptr, NQ, 2, 2, NE);
|
||||
const auto E = Reshape(e_vec.Read(), ND, VDIM, NE);
|
||||
auto val = q_layout == QVectorLayout::byNODES ?
|
||||
Reshape(q_val.Write(), NQ, VDIM, NE):
|
||||
Reshape(q_val.Write(), VDIM, NQ, NE);
|
||||
auto der = q_layout == QVectorLayout::byNODES ?
|
||||
Reshape(q_der.Write(), NQ, VDIM, 2, NE):
|
||||
Reshape(q_der.Write(), VDIM, 2, NQ, NE);
|
||||
auto det = Reshape(q_det.Write(), NQ, NE);
|
||||
mfem::forall_2D(NE, NMAX, 1, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
const int ND = T_ND ? T_ND : nd;
|
||||
const int NQ = T_NQ ? T_NQ : nq;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
constexpr int max_ND = T_ND ? T_ND : QI::MAX_ND2D;
|
||||
constexpr int max_VDIM = T_VDIM ? T_VDIM : QI::MAX_VDIM2D;
|
||||
MFEM_SHARED real_t s_E[max_VDIM*max_ND];
|
||||
MFEM_FOREACH_THREAD(d, x, ND)
|
||||
{
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
s_E[c+d*VDIM] = E(d,c,e);
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD(q, x, NQ)
|
||||
{
|
||||
if (eval_flags & (QI::VALUES | QI::PHYSICAL_VALUES))
|
||||
{
|
||||
real_t ed[max_VDIM];
|
||||
for (int c = 0; c < VDIM; c++) { ed[c] = 0.0; }
|
||||
for (int d = 0; d < ND; ++d)
|
||||
{
|
||||
const real_t b = B(q,d);
|
||||
for (int c = 0; c < VDIM; c++) { ed[c] += b*s_E[c+d*VDIM]; }
|
||||
}
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
if (q_layout == QVectorLayout::byVDIM) { val(c,q,e) = ed[c]; }
|
||||
if (q_layout == QVectorLayout::byNODES) { val(q,c,e) = ed[c]; }
|
||||
}
|
||||
}
|
||||
if ((eval_flags & QI::DERIVATIVES) ||
|
||||
(eval_flags & QI::PHYSICAL_DERIVATIVES) ||
|
||||
(eval_flags & QI::DETERMINANTS))
|
||||
{
|
||||
// use MAX_VDIM2D to avoid "subscript out of range" warnings
|
||||
real_t D[QI::MAX_VDIM2D*2];
|
||||
for (int i = 0; i < 2*VDIM; i++) { D[i] = 0.0; }
|
||||
for (int d = 0; d < ND; ++d)
|
||||
{
|
||||
const real_t wx = G(q,0,d);
|
||||
const real_t wy = G(q,1,d);
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
real_t s_e = s_E[c+d*VDIM];
|
||||
D[c+VDIM*0] += s_e * wx;
|
||||
D[c+VDIM*1] += s_e * wy;
|
||||
}
|
||||
}
|
||||
if (eval_flags & QI::DERIVATIVES)
|
||||
{
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
der(c,0,q,e) = D[c+VDIM*0];
|
||||
der(c,1,q,e) = D[c+VDIM*1];
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
der(q,c,0,e) = D[c+VDIM*0];
|
||||
der(q,c,1,e) = D[c+VDIM*1];
|
||||
}
|
||||
}
|
||||
}
|
||||
if (eval_flags & QI::PHYSICAL_DERIVATIVES)
|
||||
{
|
||||
real_t Jloc[4], Jinv[4];
|
||||
Jloc[0] = J(q,0,0,e);
|
||||
Jloc[1] = J(q,1,0,e);
|
||||
Jloc[2] = J(q,0,1,e);
|
||||
Jloc[3] = J(q,1,1,e);
|
||||
kernels::CalcInverse<2>(Jloc, Jinv);
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
const real_t u = D[c+VDIM*0];
|
||||
const real_t v = D[c+VDIM*1];
|
||||
const real_t JiU = Jinv[0]*u + Jinv[1]*v;
|
||||
const real_t JiV = Jinv[2]*u + Jinv[3]*v;
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
der(c,0,q,e) = JiU;
|
||||
der(c,1,q,e) = JiV;
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
der(q,c,0,e) = JiU;
|
||||
der(q,c,1,e) = JiV;
|
||||
}
|
||||
}
|
||||
}
|
||||
if (eval_flags & QI::DETERMINANTS)
|
||||
{
|
||||
if (VDIM == 2) { det(q,e) = kernels::Det<2>(D); }
|
||||
else
|
||||
{
|
||||
DeviceTensor<2> j(D, 3, 2);
|
||||
const double E = j(0,0)*j(0,0) + j(1,0)*j(1,0) + j(2,0)*j(2,0);
|
||||
const double F = j(0,0)*j(0,1) + j(1,0)*j(1,1) + j(2,0)*j(2,1);
|
||||
const double G = j(0,1)*j(0,1) + j(1,1)*j(1,1) + j(2,1)*j(2,1);
|
||||
det(q,e) = std::sqrt(E*G - F*F);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
|
||||
// Template compute kernel for 3D quadrature interpolation:
|
||||
// * non-tensor product version,
|
||||
// * assumes 'e_vec' is using ElementDofOrdering::NATIVE,
|
||||
// * assumes 'maps.mode == FULL'.
|
||||
template<const int T_VDIM, const int T_ND, const int T_NQ>
|
||||
static void Eval3D(const int NE,
|
||||
const int vdim,
|
||||
const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom,
|
||||
const DofToQuad &maps,
|
||||
const Vector &e_vec,
|
||||
Vector &q_val,
|
||||
Vector &q_der,
|
||||
Vector &q_det,
|
||||
const int eval_flags)
|
||||
{
|
||||
using QI = QuadratureInterpolator;
|
||||
|
||||
const int nd = maps.ndof;
|
||||
const int nq = maps.nqpt;
|
||||
const int ND = T_ND ? T_ND : nd;
|
||||
const int NQ = T_NQ ? T_NQ : nq;
|
||||
const int NMAX = NQ > ND ? NQ : ND;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
MFEM_ASSERT(maps.mode == DofToQuad::FULL, "internal error");
|
||||
MFEM_ASSERT(!geom || geom->mesh->SpaceDimension() == 3, "");
|
||||
MFEM_VERIFY(ND <= QI::MAX_ND3D, "");
|
||||
MFEM_VERIFY(NQ <= QI::MAX_NQ3D, "");
|
||||
MFEM_VERIFY(VDIM == 3 || !(eval_flags & QI::DETERMINANTS), "");
|
||||
MFEM_VERIFY(bool(geom) == bool(eval_flags & QI::PHYSICAL_DERIVATIVES),
|
||||
"'geom' must be given (non-null) only when evaluating physical"
|
||||
" derivatives");
|
||||
const auto B = Reshape(maps.B.Read(), NQ, ND);
|
||||
const auto G = Reshape(maps.G.Read(), NQ, 3, ND);
|
||||
const auto J = Reshape(geom ? geom->J.Read() : nullptr, NQ, 3, 3, NE);
|
||||
const auto E = Reshape(e_vec.Read(), ND, VDIM, NE);
|
||||
auto val = q_layout == QVectorLayout::byNODES ?
|
||||
Reshape(q_val.Write(), NQ, VDIM, NE):
|
||||
Reshape(q_val.Write(), VDIM, NQ, NE);
|
||||
auto der = q_layout == QVectorLayout::byNODES ?
|
||||
Reshape(q_der.Write(), NQ, VDIM, 3, NE):
|
||||
Reshape(q_der.Write(), VDIM, 3, NQ, NE);
|
||||
auto det = Reshape(q_det.Write(), NQ, NE);
|
||||
mfem::forall_2D(NE, NMAX, 1, [=] MFEM_HOST_DEVICE (int e)
|
||||
{
|
||||
const int ND = T_ND ? T_ND : nd;
|
||||
const int NQ = T_NQ ? T_NQ : nq;
|
||||
const int VDIM = T_VDIM ? T_VDIM : vdim;
|
||||
constexpr int max_ND = T_ND ? T_ND : QI::MAX_ND3D;
|
||||
constexpr int max_VDIM = T_VDIM ? T_VDIM : QI::MAX_VDIM3D;
|
||||
MFEM_SHARED real_t s_E[max_VDIM*max_ND];
|
||||
MFEM_FOREACH_THREAD(d, x, ND)
|
||||
{
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
s_E[c+d*VDIM] = E(d,c,e);
|
||||
}
|
||||
}
|
||||
MFEM_SYNC_THREAD;
|
||||
|
||||
MFEM_FOREACH_THREAD(q, x, NQ)
|
||||
{
|
||||
if (eval_flags & (QI::VALUES | QI::PHYSICAL_VALUES))
|
||||
{
|
||||
real_t ed[max_VDIM];
|
||||
for (int c = 0; c < VDIM; c++) { ed[c] = 0.0; }
|
||||
for (int d = 0; d < ND; ++d)
|
||||
{
|
||||
const real_t b = B(q,d);
|
||||
for (int c = 0; c < VDIM; c++) { ed[c] += b*s_E[c+d*VDIM]; }
|
||||
}
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
if (q_layout == QVectorLayout::byVDIM) { val(c,q,e) = ed[c]; }
|
||||
if (q_layout == QVectorLayout::byNODES) { val(q,c,e) = ed[c]; }
|
||||
}
|
||||
}
|
||||
if ((eval_flags & QI::DERIVATIVES) ||
|
||||
(eval_flags & QI::PHYSICAL_DERIVATIVES) ||
|
||||
(eval_flags & QI::DETERMINANTS))
|
||||
{
|
||||
// use MAX_VDIM3D to avoid "subscript out of range" warnings
|
||||
real_t D[QI::MAX_VDIM3D*3];
|
||||
for (int i = 0; i < 3*VDIM; i++) { D[i] = 0.0; }
|
||||
for (int d = 0; d < ND; ++d)
|
||||
{
|
||||
const real_t wx = G(q,0,d);
|
||||
const real_t wy = G(q,1,d);
|
||||
const real_t wz = G(q,2,d);
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
real_t s_e = s_E[c+d*VDIM];
|
||||
D[c+VDIM*0] += s_e * wx;
|
||||
D[c+VDIM*1] += s_e * wy;
|
||||
D[c+VDIM*2] += s_e * wz;
|
||||
}
|
||||
}
|
||||
if (eval_flags & QI::DERIVATIVES)
|
||||
{
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
der(c,0,q,e) = D[c+VDIM*0];
|
||||
der(c,1,q,e) = D[c+VDIM*1];
|
||||
der(c,2,q,e) = D[c+VDIM*2];
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
der(q,c,0,e) = D[c+VDIM*0];
|
||||
der(q,c,1,e) = D[c+VDIM*1];
|
||||
der(q,c,2,e) = D[c+VDIM*2];
|
||||
}
|
||||
}
|
||||
}
|
||||
if (eval_flags & QI::PHYSICAL_DERIVATIVES)
|
||||
{
|
||||
real_t Jloc[9], Jinv[9];
|
||||
for (int col = 0; col < 3; col++)
|
||||
{
|
||||
for (int row = 0; row < 3; row++)
|
||||
{
|
||||
Jloc[row+3*col] = J(q,row,col,e);
|
||||
}
|
||||
}
|
||||
kernels::CalcInverse<3>(Jloc, Jinv);
|
||||
for (int c = 0; c < VDIM; c++)
|
||||
{
|
||||
const real_t u = D[c+VDIM*0];
|
||||
const real_t v = D[c+VDIM*1];
|
||||
const real_t w = D[c+VDIM*2];
|
||||
const real_t JiU = Jinv[0]*u + Jinv[1]*v + Jinv[2]*w;
|
||||
const real_t JiV = Jinv[3]*u + Jinv[4]*v + Jinv[5]*w;
|
||||
const real_t JiW = Jinv[6]*u + Jinv[7]*v + Jinv[8]*w;
|
||||
if (q_layout == QVectorLayout::byVDIM)
|
||||
{
|
||||
der(c,0,q,e) = JiU;
|
||||
der(c,1,q,e) = JiV;
|
||||
der(c,2,q,e) = JiW;
|
||||
}
|
||||
if (q_layout == QVectorLayout::byNODES)
|
||||
{
|
||||
der(q,c,0,e) = JiU;
|
||||
der(q,c,1,e) = JiV;
|
||||
der(q,c,2,e) = JiW;
|
||||
}
|
||||
}
|
||||
}
|
||||
if (VDIM == 3 && (eval_flags & QI::DETERMINANTS))
|
||||
{
|
||||
// The check (VDIM == 3) should eliminate this block when VDIM is
|
||||
// known at compile time and (VDIM != 3).
|
||||
det(q,e) = kernels::Det<3>(D);
|
||||
}
|
||||
}
|
||||
}
|
||||
});
|
||||
}
|
||||
template void
|
||||
ImplEval1D<false>(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags);
|
||||
|
||||
} // namespace quadrature_interpolator
|
||||
|
||||
@@ -535,10 +255,20 @@ void QuadratureInterpolator::Mult(const Vector &e_vec,
|
||||
const int nd = maps.ndof;
|
||||
const int nq = maps.nqpt;
|
||||
const GeometricFactors *geom = nullptr;
|
||||
if (eval_flags & PHYSICAL_DERIVATIVES)
|
||||
{
|
||||
const int jacobians = GeometricFactors::JACOBIANS;
|
||||
geom = fespace->GetMesh()->GetGeometricFactors(*ir, jacobians);
|
||||
int jac_factors = 0;
|
||||
if (eval_flags & PHYSICAL_DERIVATIVES)
|
||||
{
|
||||
jac_factors = GeometricFactors::JACOBIANS;
|
||||
}
|
||||
if (fe->GetMapType() == FiniteElement::MapType::INTEGRAL)
|
||||
{
|
||||
jac_factors |= GeometricFactors::DETERMINANTS;
|
||||
}
|
||||
if (jac_factors)
|
||||
{
|
||||
geom = fespace->GetMesh()->GetGeometricFactors(*ir, jac_factors);
|
||||
}
|
||||
}
|
||||
|
||||
MFEM_ASSERT(!(eval_flags & DETERMINANTS) || dim == vdim ||
|
||||
@@ -552,29 +282,61 @@ void QuadratureInterpolator::Mult(const Vector &e_vec,
|
||||
{
|
||||
if (eval_flags & (VALUES | PHYSICAL_VALUES))
|
||||
{
|
||||
TensorEvalKernels::Run(dim, q_layout, vdim, nd, nq, ne, maps.B.Read(),
|
||||
e_vec.Read(), q_val.Write(), vdim, nd, nq);
|
||||
if (fe->GetMapType() == FiniteElement::MapType::INTEGRAL)
|
||||
{
|
||||
IntTensorEvalKernels::Run(dim, q_layout, vdim, nd, nq, ne,
|
||||
maps.B.Read(), geom->detJ.Read(),
|
||||
e_vec.Read(), q_val.Write(), vdim, nd, nq);
|
||||
}
|
||||
else
|
||||
{
|
||||
TensorEvalKernels::Run(dim, q_layout, vdim, nd, nq, ne,
|
||||
maps.B.Read(), e_vec.Read(), q_val.Write(),
|
||||
vdim, nd, nq);
|
||||
}
|
||||
}
|
||||
if (eval_flags & (DERIVATIVES | PHYSICAL_DERIVATIVES))
|
||||
{
|
||||
const bool phys = (eval_flags & PHYSICAL_DERIVATIVES);
|
||||
const real_t *J = phys ? geom->J.Read() : nullptr;
|
||||
const int s_dim = phys ? sdim : dim;
|
||||
GradKernels::Run(dim, q_layout, phys, vdim, nd, nq, ne,
|
||||
maps.B.Read(), maps.G.Read(), J, e_vec.Read(),
|
||||
q_der.Write(), s_dim, vdim, nd, nq);
|
||||
if (fe->GetMapType() == FiniteElement::MapType::INTEGRAL)
|
||||
{
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
else
|
||||
{
|
||||
GradKernels::Run(dim, q_layout, phys, vdim, nd, nq, ne,
|
||||
maps.B.Read(), maps.G.Read(), J, e_vec.Read(),
|
||||
q_der.Write(), s_dim, vdim, nd, nq);
|
||||
}
|
||||
}
|
||||
if (eval_flags & DETERMINANTS)
|
||||
{
|
||||
DetKernels::Run(dim, vdim, nd, nq, ne, maps.B.Read(),
|
||||
maps.G.Read(), e_vec.Read(), q_det.Write(), nd,
|
||||
nq, &d_buffer);
|
||||
if (fe->GetMapType() == FiniteElement::MapType::INTEGRAL)
|
||||
{
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
else
|
||||
{
|
||||
DetKernels::Run(dim, vdim, nd, nq, ne, maps.B.Read(), maps.G.Read(),
|
||||
e_vec.Read(), q_det.Write(), nd, nq, &d_buffer);
|
||||
}
|
||||
}
|
||||
}
|
||||
else // use_tensor_eval == false
|
||||
{
|
||||
EvalKernels::Run(dim, vdim, maps.ndof, maps.nqpt, ne,vdim, q_layout,
|
||||
geom, maps, e_vec, q_val, q_der, q_det, eval_flags);
|
||||
if (fe->GetMapType() == FiniteElement::MapType::INTEGRAL)
|
||||
{
|
||||
IntEvalKernels::Run(dim, vdim, maps.ndof, maps.nqpt, ne, vdim,
|
||||
q_layout, geom->detJ.Read(), geom, maps, e_vec,
|
||||
q_val, q_der, q_det, eval_flags);
|
||||
}
|
||||
else
|
||||
{
|
||||
EvalKernels::Run(dim, vdim, maps.ndof, maps.nqpt, ne, vdim, q_layout,
|
||||
geom, maps, e_vec, q_val, q_der, q_det, eval_flags);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
@@ -700,22 +462,41 @@ namespace
|
||||
|
||||
using namespace internal::quadrature_interpolator;
|
||||
|
||||
using EvalKernel = QuadratureInterpolator::EvalKernelType;
|
||||
using TensorEvalKernel = QuadratureInterpolator::TensorEvalKernelType;
|
||||
using GradKernel = QuadratureInterpolator::GradKernelType;
|
||||
using CollocatedGradKernel = QuadratureInterpolator::CollocatedGradKernelType;
|
||||
|
||||
template <QVectorLayout Q_LAYOUT>
|
||||
TensorEvalKernel FallbackTensorEvalKernel(int DIM)
|
||||
template <QVectorLayout Q_LAYOUT> auto IntFallbackTensorEvalKernel(int DIM)
|
||||
{
|
||||
if (DIM == 1) { return Values1D<Q_LAYOUT>; }
|
||||
else if (DIM == 2) { return Values2D<Q_LAYOUT>; }
|
||||
else if (DIM == 3) { return Values3D<Q_LAYOUT>; }
|
||||
else { MFEM_ABORT(""); }
|
||||
if (DIM == 1)
|
||||
{
|
||||
return ImplValues1D<Q_LAYOUT, true>;
|
||||
}
|
||||
else if (DIM == 2)
|
||||
{
|
||||
return ImplValues2D<Q_LAYOUT, true>;
|
||||
}
|
||||
else if (DIM == 3)
|
||||
{
|
||||
return ImplValues3D<Q_LAYOUT, true>;
|
||||
}
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
template<QVectorLayout Q_LAYOUT, bool GRAD_PHYS>
|
||||
GradKernel GetGradKernel(int DIM)
|
||||
template <QVectorLayout Q_LAYOUT> auto FallbackTensorEvalKernel(int DIM)
|
||||
{
|
||||
if (DIM == 1)
|
||||
{
|
||||
return Values1D<Q_LAYOUT>;
|
||||
}
|
||||
else if (DIM == 2)
|
||||
{
|
||||
return Values2D<Q_LAYOUT>;
|
||||
}
|
||||
else if (DIM == 3)
|
||||
{
|
||||
return Values3D<Q_LAYOUT>;
|
||||
}
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
template <QVectorLayout Q_LAYOUT, bool GRAD_PHYS> auto GetGradKernel(int DIM)
|
||||
{
|
||||
if (DIM == 1) { return Derivatives1D<Q_LAYOUT, GRAD_PHYS>; }
|
||||
else if (DIM == 2) { return Derivatives2D<Q_LAYOUT, GRAD_PHYS>; }
|
||||
@@ -723,79 +504,185 @@ GradKernel GetGradKernel(int DIM)
|
||||
else { MFEM_ABORT(""); }
|
||||
}
|
||||
|
||||
|
||||
template<QVectorLayout Q_LAYOUT>
|
||||
GradKernel GetGradKernel(int DIM, bool GRAD_PHYS)
|
||||
template <QVectorLayout Q_LAYOUT> auto GetGradKernel(int DIM, bool GRAD_PHYS)
|
||||
{
|
||||
if (GRAD_PHYS) { return GetGradKernel<Q_LAYOUT, true>(DIM); }
|
||||
else { return GetGradKernel<Q_LAYOUT, false>(DIM); }
|
||||
}
|
||||
|
||||
template<QVectorLayout Q_LAYOUT, bool GRAD_PHYS>
|
||||
CollocatedGradKernel GetCollocatedGradKernel(int DIM)
|
||||
auto GetCollocatedGradKernel(int DIM)
|
||||
{
|
||||
if (DIM == 1) { return CollocatedDerivatives1D<Q_LAYOUT, GRAD_PHYS>; }
|
||||
else if (DIM == 2) { return CollocatedDerivatives2D<Q_LAYOUT, GRAD_PHYS>; }
|
||||
else if (DIM == 3) { return CollocatedDerivatives3D<Q_LAYOUT, GRAD_PHYS>; }
|
||||
else { MFEM_ABORT(""); }
|
||||
if (DIM == 1)
|
||||
{
|
||||
return CollocatedDerivatives1D<Q_LAYOUT, GRAD_PHYS>;
|
||||
}
|
||||
else if (DIM == 2)
|
||||
{
|
||||
return CollocatedDerivatives2D<Q_LAYOUT, GRAD_PHYS>;
|
||||
}
|
||||
else if (DIM == 3)
|
||||
{
|
||||
return CollocatedDerivatives3D<Q_LAYOUT, GRAD_PHYS>;
|
||||
}
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
template<QVectorLayout Q_LAYOUT>
|
||||
CollocatedGradKernel GetCollocatedGradKernel(int DIM, bool GRAD_PHYS)
|
||||
template <QVectorLayout Q_LAYOUT>
|
||||
auto GetCollocatedGradKernel(int DIM, bool GRAD_PHYS)
|
||||
{
|
||||
if (GRAD_PHYS) { return GetCollocatedGradKernel<Q_LAYOUT, true>(DIM); }
|
||||
else { return GetCollocatedGradKernel<Q_LAYOUT, false>(DIM); }
|
||||
}
|
||||
|
||||
auto GetCollocatedGradKernel(int DIM, bool GRAD_PHYS, QVectorLayout Q_LAYOUT)
|
||||
{
|
||||
if (Q_LAYOUT == QVectorLayout::byNODES)
|
||||
{
|
||||
return GetCollocatedGradKernel<QVectorLayout::byNODES>(
|
||||
DIM, GRAD_PHYS);
|
||||
}
|
||||
else
|
||||
{
|
||||
return GetCollocatedGradKernel<QVectorLayout::byVDIM>(
|
||||
DIM, GRAD_PHYS);
|
||||
}
|
||||
}
|
||||
} // namespace
|
||||
|
||||
template <int DIM, int VDIM, int ND, int NQ>
|
||||
EvalKernel QuadratureInterpolator::EvalKernels::Kernel()
|
||||
template <int DIM, bool Integral>
|
||||
auto GetEvalKernelVDimFallback(int VDIM)
|
||||
{
|
||||
using namespace internal::quadrature_interpolator;
|
||||
if constexpr (DIM == 1) { return Eval1D; }
|
||||
else if constexpr (DIM == 2) { return Eval2D<VDIM,ND,NQ>; }
|
||||
else if constexpr (DIM == 3) { return Eval3D<VDIM,ND,NQ>; }
|
||||
if constexpr (Integral)
|
||||
{
|
||||
using EvalKernels = QuadratureInterpolator::IntEvalKernels;
|
||||
if (VDIM == 1)
|
||||
{
|
||||
return EvalKernels::Kernel<DIM, 1, 0, 0>();
|
||||
}
|
||||
else if (VDIM == 2)
|
||||
{
|
||||
return EvalKernels::Kernel<DIM, 2, 0, 0>();
|
||||
}
|
||||
else if (VDIM == 3)
|
||||
{
|
||||
return EvalKernels::Kernel<DIM, 3, 0, 0>();
|
||||
}
|
||||
}
|
||||
if constexpr (!Integral)
|
||||
{
|
||||
using EvalKernels = QuadratureInterpolator::EvalKernels;
|
||||
if (VDIM == 1)
|
||||
{
|
||||
return EvalKernels::Kernel<DIM, 1, 0, 0>();
|
||||
}
|
||||
else if (VDIM == 2)
|
||||
{
|
||||
return EvalKernels::Kernel<DIM, 2, 0, 0>();
|
||||
}
|
||||
else if (VDIM == 3)
|
||||
{
|
||||
return EvalKernels::Kernel<DIM, 3, 0, 0>();
|
||||
}
|
||||
}
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
|
||||
template <int DIM>
|
||||
EvalKernel GetEvalKernelVDimFallback(int VDIM)
|
||||
template auto GetEvalKernelVDimFallback<1, true>(int VDIM);
|
||||
template auto GetEvalKernelVDimFallback<1, false>(int VDIM);
|
||||
template auto GetEvalKernelVDimFallback<2, true>(int VDIM);
|
||||
template auto GetEvalKernelVDimFallback<2, false>(int VDIM);
|
||||
template auto GetEvalKernelVDimFallback<3, true>(int VDIM);
|
||||
template auto GetEvalKernelVDimFallback<3, false>(int VDIM);
|
||||
|
||||
QuadratureInterpolator::IntEvalKernelType
|
||||
QuadratureInterpolator::IntEvalKernels::Fallback(int DIM, int VDIM, int ND,
|
||||
int NQ)
|
||||
{
|
||||
using EvalKernels = QuadratureInterpolator::EvalKernels;
|
||||
if (VDIM == 1) { return EvalKernels::Kernel<DIM,1,0,0>(); }
|
||||
else if (VDIM == 2) { return EvalKernels::Kernel<DIM,2,0,0>(); }
|
||||
else if (VDIM == 3) { return EvalKernels::Kernel<DIM,3,0,0>(); }
|
||||
else { MFEM_ABORT(""); }
|
||||
if (DIM == 1)
|
||||
{
|
||||
return GetEvalKernelVDimFallback<1, true>(VDIM);
|
||||
}
|
||||
else if (DIM == 2)
|
||||
{
|
||||
return GetEvalKernelVDimFallback<2, true>(VDIM);
|
||||
}
|
||||
else if (DIM == 3)
|
||||
{
|
||||
return GetEvalKernelVDimFallback<3, true>(VDIM);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
}
|
||||
|
||||
EvalKernel QuadratureInterpolator::EvalKernels::Fallback(
|
||||
int DIM, int VDIM, int ND, int NQ)
|
||||
QuadratureInterpolator::EvalKernelType
|
||||
QuadratureInterpolator::EvalKernels::Fallback(int DIM, int VDIM, int ND, int NQ)
|
||||
{
|
||||
if (DIM == 1) { return GetEvalKernelVDimFallback<1>(VDIM); }
|
||||
else if (DIM == 2) { return GetEvalKernelVDimFallback<2>(VDIM); }
|
||||
else if (DIM == 3) { return GetEvalKernelVDimFallback<3>(VDIM); }
|
||||
else { MFEM_ABORT(""); }
|
||||
if (DIM == 1)
|
||||
{
|
||||
return GetEvalKernelVDimFallback<1, false>(VDIM);
|
||||
}
|
||||
else if (DIM == 2)
|
||||
{
|
||||
return GetEvalKernelVDimFallback<2, false>(VDIM);
|
||||
}
|
||||
else if (DIM == 3)
|
||||
{
|
||||
return GetEvalKernelVDimFallback<3, false>(VDIM);
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("");
|
||||
}
|
||||
}
|
||||
|
||||
TensorEvalKernel QuadratureInterpolator::TensorEvalKernels::Fallback(
|
||||
int DIM, QVectorLayout Q_LAYOUT, int, int, int)
|
||||
QuadratureInterpolator::IntTensorEvalKernelType
|
||||
QuadratureInterpolator::IntTensorEvalKernels::Fallback(int DIM,
|
||||
QVectorLayout Q_LAYOUT,
|
||||
int, int, int)
|
||||
{
|
||||
if (Q_LAYOUT == QVectorLayout::byNODES) { return FallbackTensorEvalKernel<QVectorLayout::byNODES>(DIM); }
|
||||
else { return FallbackTensorEvalKernel<QVectorLayout::byVDIM>(DIM); }
|
||||
if (Q_LAYOUT == QVectorLayout::byNODES)
|
||||
{
|
||||
return IntFallbackTensorEvalKernel<QVectorLayout::byNODES>(DIM);
|
||||
}
|
||||
else
|
||||
{
|
||||
return IntFallbackTensorEvalKernel<QVectorLayout::byVDIM>(DIM);
|
||||
}
|
||||
}
|
||||
|
||||
GradKernel QuadratureInterpolator::GradKernels::Fallback(
|
||||
int DIM, QVectorLayout Q_LAYOUT, bool GRAD_PHYS, int, int, int)
|
||||
QuadratureInterpolator::TensorEvalKernelType
|
||||
QuadratureInterpolator::TensorEvalKernels::Fallback(int DIM,
|
||||
QVectorLayout Q_LAYOUT, int,
|
||||
int, int)
|
||||
{
|
||||
if (Q_LAYOUT == QVectorLayout::byNODES)
|
||||
{
|
||||
return FallbackTensorEvalKernel<QVectorLayout::byNODES>(DIM);
|
||||
}
|
||||
else
|
||||
{
|
||||
return FallbackTensorEvalKernel<QVectorLayout::byVDIM>(DIM);
|
||||
}
|
||||
}
|
||||
|
||||
QuadratureInterpolator::GradKernelType
|
||||
QuadratureInterpolator::GradKernels::Fallback(int DIM, QVectorLayout Q_LAYOUT,
|
||||
bool GRAD_PHYS, int, int, int)
|
||||
{
|
||||
if (Q_LAYOUT == QVectorLayout::byNODES) { return GetGradKernel<QVectorLayout::byNODES>(DIM, GRAD_PHYS); }
|
||||
else { return GetGradKernel<QVectorLayout::byVDIM>(DIM, GRAD_PHYS); }
|
||||
}
|
||||
|
||||
CollocatedGradKernel QuadratureInterpolator::CollocatedGradKernels::Fallback(
|
||||
int DIM, QVectorLayout Q_LAYOUT, bool GRAD_PHYS, int, int)
|
||||
QuadratureInterpolator::CollocatedGradKernelType
|
||||
QuadratureInterpolator::CollocatedGradKernels::Fallback(int DIM,
|
||||
QVectorLayout Q_LAYOUT,
|
||||
bool GRAD_PHYS, int,
|
||||
int)
|
||||
{
|
||||
if (Q_LAYOUT == QVectorLayout::byNODES) { return GetCollocatedGradKernel<QVectorLayout::byNODES>(DIM, GRAD_PHYS); }
|
||||
else { return GetCollocatedGradKernel<QVectorLayout::byVDIM>(DIM, GRAD_PHYS); }
|
||||
return GetCollocatedGradKernel(DIM, GRAD_PHYS, Q_LAYOUT);
|
||||
}
|
||||
|
||||
/// @endcond
|
||||
@@ -806,98 +693,97 @@ namespace quadrature_interpolator
|
||||
{
|
||||
void InitEvalKernels()
|
||||
{
|
||||
using k = QuadratureInterpolator::EvalKernels;
|
||||
// 2D, VDIM = 1
|
||||
k::Specialization<2,1,1,1>::Add();
|
||||
k::Specialization<2,1,1,4>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,1,1>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,1,4>();
|
||||
// Q1
|
||||
k::Specialization<2,1,4,4>::Add();
|
||||
k::Specialization<2,1,4,9>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,4,4>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,4,9>();
|
||||
// Q2
|
||||
k::Specialization<2,1,9,9>::Add();
|
||||
k::Specialization<2,1,9,16>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,9,9>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,9,16>();
|
||||
// Q3
|
||||
k::Specialization<2,1,16,16>::Add();
|
||||
k::Specialization<2,1,16,25>::Add();
|
||||
k::Specialization<2,1,16,36>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,16,16>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,16,25>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,16,36>();
|
||||
// Q4
|
||||
k::Specialization<2,1,25,25>::Add();
|
||||
k::Specialization<2,1,25,36>::Add();
|
||||
k::Specialization<2,1,25,49>::Add();
|
||||
k::Specialization<2,1,25,64>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,25,25>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,25,36>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,25,49>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,1,25,64>();
|
||||
|
||||
// 3D, VDIM = 1
|
||||
// Q0
|
||||
k::Specialization<3,1,1,1>::Add();
|
||||
k::Specialization<3,1,1,8>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,1,1>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,1,8>();
|
||||
// Q1
|
||||
k::Specialization<3,1,8,8>::Add();
|
||||
k::Specialization<3,1,8,27>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,8,8>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,8,27>();
|
||||
// Q2
|
||||
k::Specialization<3,1,27,27>::Add();
|
||||
k::Specialization<3,1,27,64>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,27,27>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,27,64>();
|
||||
// Q3
|
||||
k::Specialization<3,1,64,64>::Add();
|
||||
k::Specialization<3,1,64,125>::Add();
|
||||
k::Specialization<3,1,64,216>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,64,64>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,64,125>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,64,216>();
|
||||
// Q4
|
||||
k::Specialization<3,1,125,125>::Add();
|
||||
k::Specialization<3,1,125,216>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,125,125>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,1,125,216>();
|
||||
|
||||
// 2D, VDIM = 3
|
||||
// Q0
|
||||
k::Specialization<2,3,1,1>::Add();
|
||||
k::Specialization<2,3,1,4>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,1,1>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,1,4>();
|
||||
// Q1
|
||||
k::Specialization<2,3,4,4>::Add();
|
||||
k::Specialization<2,3,4,9>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,4,4>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,4,9>();
|
||||
// Q2
|
||||
k::Specialization<2,3,9,4>::Add();
|
||||
k::Specialization<2,3,9,9>::Add();
|
||||
k::Specialization<2,3,9,16>::Add();
|
||||
k::Specialization<2,3,9,25>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,9,4>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,9,9>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,9,16>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,9,25>();
|
||||
// Q3
|
||||
k::Specialization<2,3,16,16>::Add();
|
||||
k::Specialization<2,3,16,25>::Add();
|
||||
k::Specialization<2,3,16,36>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,16,16>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,16,25>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,16,36>();
|
||||
// Q4
|
||||
k::Specialization<2,3,25,25>::Add();
|
||||
k::Specialization<2,3,25,36>::Add();
|
||||
k::Specialization<2,3,25,49>::Add();
|
||||
k::Specialization<2,3,25,64>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,25,25>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,25,36>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,25,49>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,3,25,64>();
|
||||
|
||||
// 2D, VDIM = 2
|
||||
// Q1
|
||||
k::Specialization<2,2,4,4>::Add();
|
||||
k::Specialization<2,2,4,9>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,4,4>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,4,9>();
|
||||
// Q2
|
||||
k::Specialization<2,2,9,9>::Add();
|
||||
k::Specialization<2,2,9,16>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,9,9>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,9,16>();
|
||||
// Q3
|
||||
k::Specialization<2,2,16,16>::Add();
|
||||
k::Specialization<2,2,16,25>::Add();
|
||||
k::Specialization<2,2,16,36>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,16,16>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,16,25>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,16,36>();
|
||||
// Q4
|
||||
k::Specialization<2,2,25,25>::Add();
|
||||
k::Specialization<2,2,25,36>::Add();
|
||||
k::Specialization<2,2,25,49>::Add();
|
||||
k::Specialization<2,2,25,64>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,25,25>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,25,36>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,25,49>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<2,2,25,64>();
|
||||
|
||||
// 3D, VDIM = 3
|
||||
// Q1
|
||||
k::Specialization<3,3,8,8>::Add();
|
||||
k::Specialization<3,3,8,27>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,3,8,8>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,3,8,27>();
|
||||
// Q2
|
||||
k::Specialization<3,3,27,27>::Add();
|
||||
k::Specialization<3,3,27,64>::Add();
|
||||
k::Specialization<3,3,27,125>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,3,27,27>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,3,27,64>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,3,27,125>();
|
||||
// Q3
|
||||
k::Specialization<3,3,64,64>::Add();
|
||||
k::Specialization<3,3,64,125>::Add();
|
||||
k::Specialization<3,3,64,216>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,3,64,64>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,3,64,125>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,3,64,216>();
|
||||
// Q4
|
||||
k::Specialization<3,3,125,125>::Add();
|
||||
k::Specialization<3,3,125,216>::Add();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,3,125,125>();
|
||||
QuadratureInterpolator::AddEvalSpecializations<3,3,125,216>();
|
||||
}
|
||||
|
||||
} // namespace quadrature_Interpolator
|
||||
|
||||
+119
-16
@@ -117,6 +117,10 @@ public:
|
||||
FiniteElementSpace is a vector space) and their determinants are computed
|
||||
and stored in @a q_det.
|
||||
|
||||
For Integral spaces, the flags VALUES requests the computation of the
|
||||
scalar field values. The result is stored in @a q_val. Derivative types
|
||||
are not supported.
|
||||
|
||||
For H(div)-conforming spaces, the flags VALUES / PHYSICAL_VALUES request
|
||||
the computation of the vector field values in reference or physical
|
||||
space, respectively. The flag PHYSICAL_MAGNITUDES requests the
|
||||
@@ -159,26 +163,49 @@ public:
|
||||
/// QuadratureInterpolator.
|
||||
static bool SupportsFESpace(const FiniteElementSpace &fespace);
|
||||
|
||||
using TensorEvalKernelType = void(*)(const int, const real_t *, const real_t *,
|
||||
real_t *, const int, const int, const int);
|
||||
using GradKernelType = void(*)(const int, const real_t *, const real_t *,
|
||||
const real_t *, const real_t *, real_t *,
|
||||
const int, const int, const int, const int);
|
||||
using CollocatedGradKernelType = void(*)(const int, const real_t *,
|
||||
const real_t *, const real_t *,
|
||||
real_t *, const int, const int,
|
||||
const int);
|
||||
using DetKernelType = void(*)(const int NE, const real_t *, const real_t *,
|
||||
const real_t *, real_t *, const int, const int,
|
||||
Vector *);
|
||||
using EvalKernelType = void(*)(const int, const int, const QVectorLayout,
|
||||
const GeometricFactors *, const DofToQuad &,
|
||||
const Vector &, Vector &, Vector &, Vector &,
|
||||
const int);
|
||||
// value map types
|
||||
using TensorEvalKernelType = void (*)(const int ne, const real_t *B,
|
||||
const real_t *e_vec, real_t *q_val,
|
||||
const int vdim, const int nd,
|
||||
const int nq);
|
||||
using GradKernelType = void (*)(const int ne, const real_t *B,
|
||||
const real_t *G, const real_t *J,
|
||||
const real_t *e_vec, real_t *q_der,
|
||||
const int s_dim, const int v_dim,
|
||||
const int nd, const int nq);
|
||||
using CollocatedGradKernelType = void (*)(const int ne, const real_t *G,
|
||||
const real_t *J,
|
||||
const real_t *e_vec, real_t *q_der,
|
||||
const int sdim, const int vdim,
|
||||
const int d1d);
|
||||
using DetKernelType = void (*)(const int NE, const real_t *B,
|
||||
const real_t *G, const real_t *e_vec,
|
||||
real_t *q_det, const int nd, const int nq,
|
||||
Vector *d_buffer);
|
||||
using EvalKernelType = void (*)(const int NE, const int vdim,
|
||||
const QVectorLayout q_layout,
|
||||
const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec,
|
||||
Vector &q_val, Vector &q_der, Vector &q_det,
|
||||
const int eval_flags);
|
||||
|
||||
// integral map types
|
||||
using IntTensorEvalKernelType = void (*)(const int ne, const real_t *B,
|
||||
const real_t *detJ,
|
||||
const real_t *e_vec, real_t *q_val,
|
||||
const int vdim, const int nd,
|
||||
const int nq);
|
||||
using IntEvalKernelType =
|
||||
void (*)(const int NE, const int vdim, const QVectorLayout q_layout,
|
||||
const real_t *detJ, const GeometricFactors *geom,
|
||||
const DofToQuad &maps, const Vector &e_vec, Vector &q_val,
|
||||
Vector &q_der, Vector &q_det, const int eval_flags);
|
||||
|
||||
using TensorEvalHDivKernelType =
|
||||
void(*)(const int, const real_t *, const real_t *, const real_t *,
|
||||
const real_t *, real_t *, const int, const int);
|
||||
|
||||
// value-type mapping
|
||||
MFEM_REGISTER_KERNELS(TensorEvalKernels, TensorEvalKernelType,
|
||||
(int, QVectorLayout, int, int, int), (int));
|
||||
MFEM_REGISTER_KERNELS(GradKernels, GradKernelType,
|
||||
@@ -187,8 +214,84 @@ public:
|
||||
MFEM_REGISTER_KERNELS(EvalKernels, EvalKernelType, (int, int, int, int));
|
||||
MFEM_REGISTER_KERNELS(CollocatedGradKernels, CollocatedGradKernelType,
|
||||
(int, QVectorLayout, bool, int, int), (int));
|
||||
|
||||
// integral-type mapping
|
||||
MFEM_REGISTER_KERNELS(IntTensorEvalKernels, IntTensorEvalKernelType,
|
||||
(int, QVectorLayout, int, int, int), (int));
|
||||
MFEM_REGISTER_KERNELS(IntEvalKernels, IntEvalKernelType, (int, int, int, int));
|
||||
|
||||
MFEM_REGISTER_KERNELS(TensorEvalHDivKernels, TensorEvalHDivKernelType,
|
||||
(int, QVectorLayout, unsigned, int, int));
|
||||
|
||||
/// Adds specializations for TensorEvalKernels
|
||||
template <int DIM, QVectorLayout Q_LAYOUT, int VDIM, int D1D, int Q1D,
|
||||
int NBZ = 0>
|
||||
static void AddTensorEvalSpecializations()
|
||||
{
|
||||
if constexpr (NBZ)
|
||||
{
|
||||
IntTensorEvalKernels::Specialization<DIM, Q_LAYOUT, VDIM, D1D,
|
||||
Q1D>::template Opt<NBZ>::Add();
|
||||
TensorEvalKernels::Specialization<DIM, Q_LAYOUT, VDIM, D1D,
|
||||
Q1D>::template Opt<NBZ>::Add();
|
||||
}
|
||||
else if constexpr (NBZ == 0)
|
||||
{
|
||||
IntTensorEvalKernels::Specialization<DIM, Q_LAYOUT, VDIM, D1D,
|
||||
Q1D>::Add();
|
||||
TensorEvalKernels::Specialization<DIM, Q_LAYOUT, VDIM, D1D,
|
||||
Q1D>::Add();
|
||||
}
|
||||
}
|
||||
|
||||
/// Adds specializations for EvalKernels
|
||||
template <int DIM, int VDIM, int ND, int NQ>
|
||||
static void AddEvalSpecializations()
|
||||
{
|
||||
IntEvalKernels::Specialization<DIM, VDIM, ND, NQ>::Add();
|
||||
EvalKernels::Specialization<DIM, VDIM, ND, NQ>::Add();
|
||||
}
|
||||
|
||||
/// Adds specializations for GradKernels
|
||||
template <int DIM, QVectorLayout Q_LAYOUT, bool GRAD_PHYS, int VDIM, int D1D,
|
||||
int Q1D, int NBZ = 0>
|
||||
static void AddGradSpecializations()
|
||||
{
|
||||
if constexpr (NBZ)
|
||||
{
|
||||
GradKernels::Specialization<DIM, Q_LAYOUT, GRAD_PHYS, VDIM, D1D,
|
||||
Q1D>::template Opt<NBZ>::Add();
|
||||
}
|
||||
else if constexpr (NBZ == 0)
|
||||
{
|
||||
GradKernels::Specialization<DIM, Q_LAYOUT, GRAD_PHYS, VDIM, D1D,
|
||||
Q1D>::Add();
|
||||
}
|
||||
}
|
||||
|
||||
/// Adds specializations for CollocatedGradKernels
|
||||
template <int DIM, QVectorLayout Q_LAYOUT, bool GRAD_PHYS, int VDIM, int D1D,
|
||||
int NBZ = 0>
|
||||
static void AddCollocatedGradSpecializations()
|
||||
{
|
||||
if constexpr (NBZ)
|
||||
{
|
||||
CollocatedGradKernels::Specialization<DIM, Q_LAYOUT, GRAD_PHYS, VDIM,
|
||||
D1D>::template Opt<NBZ>::Add();
|
||||
}
|
||||
else if constexpr (NBZ == 0)
|
||||
{
|
||||
CollocatedGradKernels::Specialization<DIM, Q_LAYOUT, GRAD_PHYS, VDIM,
|
||||
D1D>::Add();
|
||||
}
|
||||
}
|
||||
|
||||
/// Adds specializations for DetKernels
|
||||
template <int DIM, int SDIM, int D1D, int Q1D>
|
||||
static void AddDetSpecializations()
|
||||
{
|
||||
DetKernels::Specialization<DIM, SDIM, D1D, Q1D>::Add();
|
||||
}
|
||||
};
|
||||
|
||||
}
|
||||
|
||||
@@ -66,6 +66,23 @@ constexpr bool mfem_use_gpu = false;
|
||||
#define MFEM_THREAD_SIZE(k) 1
|
||||
#define MFEM_FOREACH_THREAD(i,k,N) for(int i=0; i<N; i++)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT(i,k,N) MFEM_FOREACH_THREAD(i,k,N)
|
||||
// Assigns a thread block shaped (SX,SY,SZ) contiguous in x.
|
||||
// Example (3,2,1) block:
|
||||
// 0 (0,0), 1 (1,0), 2 (2,0)
|
||||
// 3 (1,0), 4 (1,1), 5 (2,1)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D(ix, iy, iz, k, SX, SY, SZ) \
|
||||
for (int iz = 0; iz < SZ; ++iz) \
|
||||
for (int iy = 0; iy < SY; ++iy) \
|
||||
for (int ix = 0; ix < SX; ++ix)
|
||||
// Assigns a thread block shaped (OX,OY,OZ) to work on items (SX,SY,SZ),
|
||||
// contiguous in x. This intentionally offsets threads within the block to avoid
|
||||
// shared memory bank conflicts.
|
||||
// Example (3,2,1) block assigned to work on (2,2,1) items:
|
||||
// 0 (0,0), 1 (1,0), 2 (N/A)
|
||||
// 3 (1,0), 4 (1,1), 5 (N/A)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D_OFFSET(ix, iy, iz, k, SX, SY, SZ, OX, \
|
||||
OY, OZ) \
|
||||
MFEM_FOREACH_THREAD_DIRECT_3D(ix, iy, iz, k, SX, SY, SZ)
|
||||
#endif
|
||||
|
||||
// 'double' and 'float' atomicAdd implementation for previous versions of CUDA
|
||||
|
||||
@@ -49,6 +49,23 @@ constexpr bool mfem_use_gpu = true;
|
||||
#define MFEM_THREAD_SIZE(k) blockDim.k
|
||||
#define MFEM_FOREACH_THREAD(i,k,N) for(int i=threadIdx.k; i<N; i+=blockDim.k)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT(i,k,N) if(const int i=threadIdx.k; i<N)
|
||||
// Assigns a thread block shaped (SX,SY,SZ) contiguous in x.
|
||||
// Example (3,2,1) block:
|
||||
// 0 (0,0), 1 (1,0), 2 (2,0)
|
||||
// 3 (1,0), 4 (1,1), 5 (2,1)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D(ix, iy, iz, k, SX, SY, SZ) \
|
||||
if (int ix = threadIdx.k % (SX), iy = threadIdx.k / (SX), iz = iy / (SY); \
|
||||
(iy %= (SY)), (threadIdx.k < (SX) * (SY) * (SZ)))
|
||||
// Assigns a thread block shaped (OX,OY,OZ) to work on items (SX,SY,SZ),
|
||||
// contiguous in x. This intentionally offsets threads within the block to avoid
|
||||
// shared memory bank conflicts.
|
||||
// Example (3,2,1) block assigned to work on (2,2,1) items:
|
||||
// 0 (0,0), 1 (1,0), 2 (N/A)
|
||||
// 3 (1,0), 4 (1,1), 5 (N/A)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D_OFFSET(ix, iy, iz, k, SX, SY, SZ, OX, \
|
||||
OY, OZ) \
|
||||
if (int ix = threadIdx.k % (OX), iy = threadIdx.k / (OX), iz = iy / (OY); \
|
||||
(ix < (SX)) && ((iy %= (OY)) < (SY)) && (iz < (SZ)))
|
||||
#endif // defined(__CUDA_ARCH__)
|
||||
#endif // defined(MFEM_USE_CUDA) && defined(__CUDACC__)
|
||||
|
||||
|
||||
+2
-2
@@ -480,8 +480,8 @@ template <typename DBODY>
|
||||
void RajaHipWrap1D(const int N, DBODY &&d_body)
|
||||
{
|
||||
//true denotes asynchronous kernel
|
||||
RAJA::forall<RAJA::hip_exec<MFEM_HIP_BLOCKS,true> >(RAJA::RangeSegment(0,N),
|
||||
d_body);
|
||||
RAJA::forall<RAJA::hip_exec<MFEM_HIP_BLOCKS, true> >(
|
||||
Device::GetRajaResource(), RAJA::RangeSegment(0, N), d_body);
|
||||
}
|
||||
|
||||
template <typename DBODY>
|
||||
|
||||
@@ -51,6 +51,25 @@ constexpr bool mfem_use_gpu = true;
|
||||
for(int i=hipThreadIdx_ ##k; i<N; i+=hipBlockDim_ ##k)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT(i,k,N) \
|
||||
if(const int i=hipThreadIdx_ ##k; i<N)
|
||||
// Assigns a thread block shaped (SX,SY,SZ) contiguous in x.
|
||||
// Example (3,2,1) block:
|
||||
// 0 (0,0), 1 (1,0), 2 (2,0)
|
||||
// 3 (1,0), 4 (1,1), 5 (2,1)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D(ix, iy, iz, k, SX, SY, SZ) \
|
||||
if (int ix = hipThreadIdx_##k % (SX), iy = hipThreadIdx_##k / (SX), \
|
||||
iz = iy / (SY); \
|
||||
(iy %= (SY)), (hipThreadIdx_##k < (SX) * (SY) * (SZ)))
|
||||
// Assigns a thread block shaped (OX,OY,OZ) to work on items (SX,SY,SZ),
|
||||
// contiguous in x. This intentionally offsets threads within the block to avoid
|
||||
// shared memory bank conflicts.
|
||||
// Example (3,2,1) block assigned to work on (2,2,1) items:
|
||||
// 0 (0,0), 1 (1,0), 2 (N/A)
|
||||
// 3 (1,0), 4 (1,1), 5 (N/A)
|
||||
#define MFEM_FOREACH_THREAD_DIRECT_3D_OFFSET(ix, iy, iz, k, SX, SY, SZ, OX, \
|
||||
OY, OZ) \
|
||||
if (int ix = hipThreadIdx_##k % (OX), iy = hipThreadIdx_##k / (OX), \
|
||||
iz = iy / (OY); \
|
||||
(ix < (SX)) && ((iy %= (OY)) < (SY)) && (iz < (SZ)))
|
||||
#endif // defined(__HIP_DEVICE_COMPILE__)
|
||||
#endif // defined(MFEM_USE_HIP) && defined(__HIP__)
|
||||
|
||||
|
||||
@@ -27,7 +27,6 @@ list(APPEND SRCS
|
||||
handle.cpp
|
||||
matrix.cpp
|
||||
mma.cpp
|
||||
multivector.cpp
|
||||
ode.cpp
|
||||
operator.cpp
|
||||
ordering.cpp
|
||||
@@ -64,7 +63,6 @@ list(APPEND HDRS
|
||||
linalg.hpp
|
||||
matrix.hpp
|
||||
mma.hpp
|
||||
multivector.hpp
|
||||
ode.hpp
|
||||
operator.hpp
|
||||
ordering.hpp
|
||||
|
||||
@@ -13,6 +13,7 @@
|
||||
#include "native.hpp"
|
||||
#include "gpu_blas.hpp"
|
||||
#include "magma.hpp"
|
||||
#include "../../general/reducers.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
@@ -119,4 +120,16 @@ void BatchedLinAlgBase::MultTranspose(const DenseTensor &A, const Vector &x,
|
||||
AddMult(A, x, y, 1.0, 0.0, Op::T);
|
||||
}
|
||||
|
||||
void VerifyBatchedLUInfo(const Array<int> &info_array, const char *message)
|
||||
{
|
||||
static Array<int> workspace;
|
||||
int status = 0;
|
||||
const int *d_info = info_array.Read();
|
||||
mfem::reduce(
|
||||
info_array.Size(), status,
|
||||
[=] MFEM_HOST_DEVICE (int i, int &r) { r |= d_info[i]; },
|
||||
BOrReducer<int> {}, true, workspace);
|
||||
MFEM_VERIFY(status == 0, message);
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
@@ -141,6 +141,9 @@ public:
|
||||
virtual ~BatchedLinAlgBase() { }
|
||||
};
|
||||
|
||||
/// Check that all batched LU info values are zero.
|
||||
void VerifyBatchedLUInfo(const Array<int> &info_array, const char *message);
|
||||
|
||||
} // namespace mfem
|
||||
|
||||
#endif
|
||||
|
||||
@@ -126,7 +126,8 @@ void GPUBlasBatchedLinAlg::LUFactor(DenseTensor &A, Array<int> &P) const
|
||||
const blasStatus_t status = MFEM_GPUBLAS_PREFIX(getrfBatched)(
|
||||
GPUBlas::Handle(), n, d_A_ptrs, n, P.Write(),
|
||||
info_array.Write(), n_mat);
|
||||
MFEM_VERIFY(status == MFEM_BLAS_SUCCESS, "");
|
||||
MFEM_VERIFY(status == MFEM_BLAS_SUCCESS, "GPU BLAS error.");
|
||||
VerifyBatchedLUInfo(info_array, "Batch LU factorization failed");
|
||||
}
|
||||
|
||||
void GPUBlasBatchedLinAlg::LUSolve(
|
||||
@@ -189,12 +190,14 @@ void GPUBlasBatchedLinAlg::Invert(DenseTensor &A) const
|
||||
status = MFEM_GPUBLAS_PREFIX(getrfBatched)(
|
||||
GPUBlas::Handle(), n, d_LU_ptrs, n, P.Write(),
|
||||
info_array.Write(), n_mat);
|
||||
MFEM_VERIFY(status == MFEM_BLAS_SUCCESS, "");
|
||||
MFEM_VERIFY(status == MFEM_BLAS_SUCCESS, "GPU BLAS error.");
|
||||
VerifyBatchedLUInfo(info_array, "Batch LU factorization failed");
|
||||
|
||||
status = MFEM_GPUBLAS_PREFIX(getriBatched)(
|
||||
GPUBlas::Handle(), n, d_LU_ptrs, n, P.ReadWrite(), d_A_ptrs, n,
|
||||
info_array.Write(), n_mat);
|
||||
MFEM_VERIFY(status == MFEM_BLAS_SUCCESS, "");
|
||||
MFEM_VERIFY(status == MFEM_BLAS_SUCCESS, "GPU BLAS error.");
|
||||
VerifyBatchedLUInfo(info_array, "Batch matrix inversion failed");
|
||||
}
|
||||
|
||||
#endif
|
||||
|
||||
@@ -99,7 +99,8 @@ void MagmaBatchedLinAlg::LUFactor(DenseTensor &A, Array<int> &P) const
|
||||
const magma_int_t status = MFEM_MAGMA_PREFIX(getrf_batched)(
|
||||
n, n, d_A_ptrs, n, d_P_ptrs,
|
||||
info_array.Write(), n_mat, Magma::Queue());
|
||||
MFEM_VERIFY(status == MAGMA_SUCCESS, "");
|
||||
MFEM_VERIFY(status == MAGMA_SUCCESS, "MAGMA error.");
|
||||
VerifyBatchedLUInfo(info_array, "Batch LU factorization failed");
|
||||
}
|
||||
|
||||
void MagmaBatchedLinAlg::LUSolve(
|
||||
@@ -169,12 +170,14 @@ void MagmaBatchedLinAlg::Invert(DenseTensor &A) const
|
||||
status = MFEM_MAGMA_PREFIX(getrf_batched)(
|
||||
n, n, d_LU_ptrs, n, d_P_ptrs, info_array.Write(), n_mat,
|
||||
Magma::Queue());
|
||||
MFEM_VERIFY(status == MAGMA_SUCCESS, "");
|
||||
MFEM_VERIFY(status == MAGMA_SUCCESS, "MAGMA error.");
|
||||
VerifyBatchedLUInfo(info_array, "Batch LU factorization failed");
|
||||
|
||||
status = MFEM_MAGMA_PREFIX(getri_outofplace_batched)(
|
||||
n, d_LU_ptrs, n, d_P_ptrs, d_A_ptrs, n, info_array.Write(),
|
||||
n_mat, Magma::Queue());
|
||||
MFEM_VERIFY(status == MAGMA_SUCCESS, "");
|
||||
MFEM_VERIFY(status == MAGMA_SUCCESS, "MAGMA error.");
|
||||
VerifyBatchedLUInfo(info_array, "Batch matrix inversion failed");
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
|
||||
@@ -246,6 +246,10 @@ SparseMatrix * ComplexSparseMatrix::GetSystemMatrix() const
|
||||
const int nrows_i = (A_i)?A_i->Height():0;
|
||||
const int nrows = std::max(nrows_r, nrows_i);
|
||||
|
||||
const int ncols_r = (A_r)?A_r->Width():0;
|
||||
const int ncols_i = (A_i)?A_i->Width():0;
|
||||
const int ncols = std::max(ncols_r, ncols_i);
|
||||
|
||||
const int *I_r = (A_r)?A_r->GetI():NULL;
|
||||
const int *I_i = (A_i)?A_i->GetI():NULL;
|
||||
|
||||
@@ -280,7 +284,7 @@ SparseMatrix * ComplexSparseMatrix::GetSystemMatrix() const
|
||||
J[I[i] + j] = J_r[I_r[i] + j];
|
||||
D[I[i] + j] = D_r[I_r[i] + j];
|
||||
|
||||
J[I[i+nrows] + off_i + j] = J_r[I_r[i] + j] + nrows;
|
||||
J[I[i+nrows] + off_i + j] = J_r[I_r[i] + j] + ncols;
|
||||
D[I[i+nrows] + off_i + j] = factor*D_r[I_r[i] + j];
|
||||
}
|
||||
}
|
||||
@@ -289,7 +293,7 @@ SparseMatrix * ComplexSparseMatrix::GetSystemMatrix() const
|
||||
const int off_r = (I_r)?(I_r[i+1] - I_r[i]):0;
|
||||
for (int j=0; j<I_i[i+1] - I_i[i]; j++)
|
||||
{
|
||||
J[I[i] + off_r + j] = J_i[I_i[i] + j] + nrows;
|
||||
J[I[i] + off_r + j] = J_i[I_i[i] + j] + ncols;
|
||||
D[I[i] + off_r + j] = -D_i[I_i[i] + j];
|
||||
|
||||
J[I[i+nrows] + j] = J_i[I_i[i] + j];
|
||||
@@ -892,12 +896,12 @@ ComplexHypreParMatrix::getColStartStop(const HypreParMatrix * A_r,
|
||||
HYPRE_BigInt loc_start_stop[2];
|
||||
offd_col_start_stop = new HYPRE_BigInt[2 * num_recv_procs];
|
||||
|
||||
const HYPRE_BigInt * row_part = (A_r) ? A_r->RowPart() :
|
||||
((A_i) ? A_i->RowPart() : NULL);
|
||||
const HYPRE_BigInt * col_part = (A_r) ? A_r->ColPart() :
|
||||
((A_i) ? A_i->ColPart() : NULL);
|
||||
|
||||
int row_part_ind = (HYPRE_AssumedPartitionCheck()) ? 0 : myid_;
|
||||
loc_start_stop[0] = row_part[row_part_ind];
|
||||
loc_start_stop[1] = row_part[row_part_ind+1];
|
||||
int col_part_ind = (HYPRE_AssumedPartitionCheck()) ? 0 : myid_;
|
||||
loc_start_stop[0] = col_part[col_part_ind];
|
||||
loc_start_stop[1] = col_part[col_part_ind+1];
|
||||
|
||||
MPI_Request * req = new MPI_Request[send_procs.size()+recv_procs.size()];
|
||||
MPI_Status * stat = new MPI_Status[send_procs.size()+recv_procs.size()];
|
||||
|
||||
@@ -15,7 +15,6 @@
|
||||
// Linear algebra header file
|
||||
|
||||
#include "vector.hpp"
|
||||
#include "multivector.hpp"
|
||||
#include "operator.hpp"
|
||||
#include "matrix.hpp"
|
||||
#include "sparsemat.hpp"
|
||||
|
||||
@@ -1,60 +0,0 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "multivector.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
MultiVector::MultiVector(const Array<int> &vector_sizes)
|
||||
{
|
||||
SetSizes(vector_sizes);
|
||||
}
|
||||
|
||||
MultiVector::MultiVector(const Array<int> &vector_sizes, MemoryType mt)
|
||||
{
|
||||
SetSizes(vector_sizes, mt);
|
||||
}
|
||||
|
||||
MultiVector::MultiVector(Vector &base, const Array<int> &vector_sizes)
|
||||
{
|
||||
MakeRef(base, vector_sizes);
|
||||
}
|
||||
|
||||
void MultiVector::SetSizes(const Array<int> &vector_sizes)
|
||||
{
|
||||
blocks.resize(vector_sizes.Size());
|
||||
for (int i = 0; i < vector_sizes.Size(); i++)
|
||||
{
|
||||
operator[](i).SetSize(vector_sizes[i]);
|
||||
}
|
||||
}
|
||||
|
||||
void MultiVector::SetSizes(const Array<int> &vector_sizes, MemoryType mt)
|
||||
{
|
||||
blocks.resize(vector_sizes.Size());
|
||||
for (int i = 0; i < vector_sizes.Size(); i++)
|
||||
{
|
||||
operator[](i).SetSize(vector_sizes[i], mt);
|
||||
}
|
||||
}
|
||||
|
||||
void MultiVector::MakeRef(Vector &base, const Array<int> &vector_sizes)
|
||||
{
|
||||
blocks.resize(vector_sizes.Size());
|
||||
for (int offset = 0, i = 0; i < vector_sizes.Size(); i++)
|
||||
{
|
||||
blocks[i].emplace<0>(base, offset, vector_sizes[i]);
|
||||
offset += vector_sizes[i];
|
||||
}
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
@@ -1,198 +0,0 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#ifndef MFEM_MULTIVECTOR_HPP
|
||||
#define MFEM_MULTIVECTOR_HPP
|
||||
|
||||
#include "../general/array.hpp"
|
||||
#include "vector.hpp"
|
||||
#include <vector>
|
||||
#include <array>
|
||||
#include <variant>
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// Class representing an array of Vectors with generally different sizes.
|
||||
/** This class is similar to BlockVector with the following two main
|
||||
differences:
|
||||
- the data for the individual Vector blocks does not need to be part of one
|
||||
big contiguous memory allocation;
|
||||
- this class does not inherit from class Vector (as a consequence of the
|
||||
first bullet).
|
||||
|
||||
Internally, each Vector block is represented as either:
|
||||
- (default) a Vector object constructed and owned by this class; this
|
||||
object, in turn, as any Vector object, can own its Memory allocation or
|
||||
refer to a sub-Memory of another Memory object; or
|
||||
- a pointer to an externally allocated Vector or classes derived from
|
||||
Vector. */
|
||||
class MultiVector
|
||||
{
|
||||
private:
|
||||
std::vector<std::variant<Vector,Vector*>> blocks;
|
||||
|
||||
public:
|
||||
/// Create an empty MultiVector with zero blocks.
|
||||
MultiVector() = default;
|
||||
|
||||
/** @brief Create a MultiVector with @a num_blocks blocks. The individual
|
||||
Vector blocks are default initialized, i.e. they all have size zero. */
|
||||
MultiVector(int num_blocks)
|
||||
: blocks(num_blocks) { }
|
||||
|
||||
/** @brief Construct a MultiVector with number of blocks and individual block
|
||||
Vector sizes given by @a vector_sizes.
|
||||
|
||||
@note The memory of the individual Vector blocks is NOT initialized. */
|
||||
MultiVector(const Array<int> &vector_sizes);
|
||||
|
||||
/** @brief Construct a MultiVector with number of blocks and individual block
|
||||
Vector sizes given by @a vector_sizes. All Vector blocks use the
|
||||
MemoryType @a mt.
|
||||
|
||||
@note The memory of the individual Vector blocks is NOT initialized. */
|
||||
MultiVector(const Array<int> &vector_sizes, MemoryType mt);
|
||||
|
||||
/** @brief Construct a MultiVector referencing data within a given monolithic
|
||||
Vector @a base.
|
||||
|
||||
With this constructor, the Memory flags of @a base and of the individual
|
||||
Vector blocks may need to be explicitly synchronized when data is moved
|
||||
between host and device. */
|
||||
MultiVector(Vector &base, const Array<int> &vector_sizes);
|
||||
|
||||
/** @brief Construct a MultiVector referencing multiple Vectors given as
|
||||
arguments.
|
||||
|
||||
The VectorTypes reference arguments are expected to be static_cast-able
|
||||
to (Vector &) which is the case if the types are derived from Vector,
|
||||
e.g. HypreParVector, GridFunction, etc.
|
||||
|
||||
With this constructor, operations on individual Vector blocks are
|
||||
performed directly on the objects @a vs. In particular, there is no need
|
||||
to synchronize the Memory flags of @a vs and the ones of the individual
|
||||
Vector blocks when data is moved between host and device. */
|
||||
template <typename... VectorTypes,
|
||||
std::enable_if_t<
|
||||
std::conjunction_v<
|
||||
std::is_convertible<VectorTypes&,Vector&>...>, bool> = true>
|
||||
MultiVector(VectorTypes &...vs) { MakeRef(vs...); }
|
||||
|
||||
/// Return the number of Vectors in the MultiVector.
|
||||
int NumBlocks() const { return blocks.size(); }
|
||||
|
||||
/** @brief Set the number of Vectors in the MultiVector. Existing Vector
|
||||
blocks will remain unmodified. New Vector blocks will be default
|
||||
initialized, i.e. they all have size zero. */
|
||||
void SetNumBlocks(int num_blocks) { blocks.resize(num_blocks); }
|
||||
|
||||
/// Read-write access to the i-th Vector.
|
||||
inline Vector &operator[](int i);
|
||||
|
||||
/// Read-only access to the i-th Vector.
|
||||
inline const Vector &operator[](int i) const;
|
||||
|
||||
/** @brief Update the MultiVector according to the given @a vector_sizes.
|
||||
|
||||
This method can be used to add or remove blocks. The individual Vector
|
||||
sizes are updated using the method Vector::SetSize(int). */
|
||||
void SetSizes(const Array<int> &vector_sizes);
|
||||
|
||||
/** @brief Update the MultiVector according to the given @a vector_sizes and
|
||||
MemoryType @a mt.
|
||||
|
||||
This method can be used to add or remove blocks. The individual Vector
|
||||
sizes and MemoryType are updated using the method
|
||||
Vector::SetSize(int, MemoryType). */
|
||||
void SetSizes(const Array<int> &vector_sizes, MemoryType mt);
|
||||
|
||||
/** @brief Update the MultiVector to reference data within a given monolithic
|
||||
Vector @a base.
|
||||
|
||||
After calling this method, the Memory flags of @a base and of the
|
||||
individual Vector blocks may need to be explicitly synchronized when data
|
||||
is moved between host and device.*/
|
||||
void MakeRef(Vector &base, const Array<int> &vector_sizes);
|
||||
|
||||
/** @brief Update the @a i-th MultiVector block to reference data within the
|
||||
given monolithic Vector @a base at the given @a offset and with the given
|
||||
@a size.
|
||||
|
||||
After calling this method, the Memory flags of @a base and of the @a i-th
|
||||
Vector block may need to be explicitly synchronized when data is moved
|
||||
between host and device.*/
|
||||
inline void MakeRef(int i, Vector &base, int offset, int size)
|
||||
{
|
||||
blocks[i].emplace<0>(base, offset, size);
|
||||
}
|
||||
|
||||
/** @brief Update the MultiVector to reference multiple Vectors given as
|
||||
arguments.
|
||||
|
||||
The VectorTypes reference arguments are expected to be static_cast-able
|
||||
to (Vector &) which is the case if the types are derived from Vector,
|
||||
e.g. HypreParVector, GridFunction, etc.
|
||||
|
||||
After calling this method, operations on individual Vector blocks are
|
||||
performed directly on the objects @a vs. In particular, there is no need
|
||||
to synchronize the Memory flags of @a vs and the ones of the individual
|
||||
Vector blocks when data is moved between host and device. */
|
||||
template <typename... VectorTypes,
|
||||
std::enable_if_t<
|
||||
std::conjunction_v<
|
||||
std::is_convertible<VectorTypes&,Vector&>...>, bool> = true>
|
||||
inline void MakeRef(VectorTypes &...vs);
|
||||
|
||||
/** @brief Update the @a i-th MultiVector block to reference the given
|
||||
Vector @a v.
|
||||
|
||||
After calling this method, operations on the @a i-th Vector block are
|
||||
performed directly on the Vector @a v. In particular, there is no need
|
||||
to synchronize the Memory flags of @a v and the ones of the @a i-th
|
||||
Vector blocks when data is moved between host and device. */
|
||||
inline void MakeRef(int i, Vector &v) { blocks[i] = &v; }
|
||||
};
|
||||
|
||||
// Inline and template methods
|
||||
|
||||
inline Vector &MultiVector::operator[](int i)
|
||||
{
|
||||
auto &bi = blocks[i];
|
||||
return (bi.index() == 0) ? std::get<0>(bi) : *std::get<1>(bi);
|
||||
}
|
||||
|
||||
inline const Vector &MultiVector::operator[](int i) const
|
||||
{
|
||||
auto &bi = blocks[i];
|
||||
return (bi.index() == 0) ? std::get<0>(bi) : *std::get<1>(bi);
|
||||
}
|
||||
|
||||
template <typename... VectorTypes,
|
||||
std::enable_if_t<
|
||||
std::conjunction_v<
|
||||
std::is_convertible<VectorTypes&,Vector&>...>, bool>>
|
||||
inline void MultiVector::MakeRef(VectorTypes &...vs)
|
||||
{
|
||||
blocks.resize(sizeof...(vs));
|
||||
if constexpr (sizeof...(vs) > 0)
|
||||
{
|
||||
const std::array vs_p{&static_cast<Vector&>(vs)...};
|
||||
for (std::size_t i = 0; i < sizeof...(vs); i++)
|
||||
{
|
||||
blocks[i] = vs_p[i];
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
|
||||
#endif // MFEM_MULTIVECTOR_HPP
|
||||
@@ -111,16 +111,6 @@ void Operator::ArrayAddMultTranspose(const Array<const Vector *> &X,
|
||||
}
|
||||
}
|
||||
|
||||
void Operator::Mult(const MultiVector &, MultiVector &)
|
||||
{
|
||||
MFEM_ABORT("this method is not overriden for this class!");
|
||||
}
|
||||
|
||||
Operator &Operator::GetGradient(const MultiVector &) const
|
||||
{
|
||||
MFEM_ABORT("this method is not overriden for this class!");
|
||||
}
|
||||
|
||||
void Operator::FormLinearSystem(const Array<int> &ess_tdof_list,
|
||||
Vector &x, Vector &b,
|
||||
Operator* &Aout, Vector &X, Vector &B,
|
||||
|
||||
@@ -13,7 +13,6 @@
|
||||
#define MFEM_OPERATOR
|
||||
|
||||
#include "vector.hpp"
|
||||
#include "multivector.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
@@ -130,16 +129,6 @@ public:
|
||||
virtual void ArrayAddMultTranspose(const Array<const Vector *> &X,
|
||||
Array<Vector *> &Y, const real_t a = 1.0) const;
|
||||
|
||||
/** @brief Operator application, y = A(x), where the input @a x and the
|
||||
output @a y are MultiVector objects, i.e. they generally use
|
||||
non-contiguous memory representation.
|
||||
|
||||
The typical use case for this method are block operators like
|
||||
DifferentiableOperator.
|
||||
|
||||
The base class implementation for the method is to generate an error. */
|
||||
virtual void Mult(const MultiVector &x, MultiVector &y);
|
||||
|
||||
/** @brief Evaluate the gradient operator at the point @a x. The default
|
||||
behavior in class Operator is to generate an error. */
|
||||
virtual Operator &GetGradient(const Vector &x) const
|
||||
@@ -148,16 +137,6 @@ public:
|
||||
return const_cast<Operator &>(*this);
|
||||
}
|
||||
|
||||
/** @brief Evaluate the gradient operator at the point @a x. The input @a x
|
||||
is provided as a MultiVector, i.e. it generally uses non-contiguous
|
||||
memory representation.
|
||||
|
||||
The typical use case for this method are block operators like
|
||||
DifferentiableOperator.
|
||||
|
||||
The base class implementation for the method is to generate an error. */
|
||||
virtual Operator &GetGradient(const MultiVector &x) const;
|
||||
|
||||
/** @brief Computes the diagonal entries into @a diag. Typically, this
|
||||
operation only makes sense for linear Operator%s. In some cases, only an
|
||||
approximation of the diagonal is computed. */
|
||||
|
||||
@@ -810,6 +810,7 @@ MINIAPPS_SUBDIRS = dpg/util hooke/operators hooke/preconditioners \
|
||||
hooke/materials hooke/kernels
|
||||
FORMAT_FILES += $(foreach dir,$(TESTS_SUBDIRS),tests/$(dir)/*.?pp)
|
||||
FORMAT_FILES += $(foreach dir,$(UNIT_TESTS_SUBDIRS),tests/unit/$(dir)/*.?pp)
|
||||
FORMAT_FILES += tests/unit/fem/specializations/*.?pp
|
||||
FORMAT_FILES += $(foreach dir,$(MINIAPPS_SUBDIRS),miniapps/$(dir)/*.?pp)
|
||||
FORMAT_FILES += config/cmake/config.hpp.in config/config.hpp.in mfem*.hpp
|
||||
FORMAT_EXCLUDE = general/tinyxml2.cpp tests/unit/catch.hpp
|
||||
|
||||
+121
-10
@@ -667,9 +667,84 @@ void Mesh::GetEdgeTransformation(int EdgeNo,
|
||||
}
|
||||
EdTr->SetFE(edge_el);
|
||||
}
|
||||
else
|
||||
else // L2 Nodes (e.g., periodic mesh), go through the face containing the edge
|
||||
{
|
||||
MFEM_ABORT("Not implemented.");
|
||||
// Search for a face that contains this edge
|
||||
GetEdgeFaceTable();
|
||||
|
||||
Array<int> faces_e;
|
||||
edge_face->GetRow(EdgeNo, faces_e);
|
||||
|
||||
MFEM_VERIFY(faces_e.Size() > 0, "Edge not found in any face!");
|
||||
const int face_no = faces_e[0];
|
||||
|
||||
// Get edge local index and orientation
|
||||
Array<int> edges_f, oris_f;
|
||||
GetFaceEdges(face_no, edges_f, oris_f);
|
||||
const int local_idx = edges_f.Find(EdgeNo);
|
||||
MFEM_ASSERT(local_idx >= 0, "Edge not found on the face!");
|
||||
const int edge_ori = oris_f[local_idx] > 0 ? 0 : 1;
|
||||
|
||||
// Get face information
|
||||
const FaceInfo &face_info = faces_info[face_no];
|
||||
|
||||
// Get transformation from face to edge
|
||||
IntegrationPointTransformation LocEdge;
|
||||
int edge_info = EncodeFaceInfo(local_idx, edge_ori);
|
||||
Element::Type face_type = GetFaceElementType(face_no);
|
||||
|
||||
switch (face_type)
|
||||
{
|
||||
case Element::TRIANGLE:
|
||||
GetLocalSegToTriTransformation(LocEdge.Transf, edge_info);
|
||||
break;
|
||||
case Element::QUADRILATERAL:
|
||||
GetLocalSegToQuadTransformation(LocEdge.Transf, edge_info);
|
||||
break;
|
||||
default:
|
||||
MFEM_ABORT("Unsupported face type for edge transformation!");
|
||||
}
|
||||
|
||||
// Get edge element
|
||||
const int order = Nodes->FESpace()->GetElementOrder(face_info.Elem1No);
|
||||
const L2_FECollection *l2_fec = dynamic_cast<const L2_FECollection*>
|
||||
(Nodes->FESpace()->FEColl());
|
||||
if (l2_fec)
|
||||
{
|
||||
// L2 elements do not have a defined trace space
|
||||
if (!EdgeTransfElement || EdgeTransfElement->GetOrder() != order
|
||||
|| EdgeTransfElement->GetBasisType() != l2_fec->GetBasisType())
|
||||
{
|
||||
EdgeTransfElement = make_unique<L2_SegmentElement>(
|
||||
order, l2_fec->GetBasisType());
|
||||
}
|
||||
edge_el = EdgeTransfElement.get();
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Unsupported finite element collection.");
|
||||
}
|
||||
|
||||
// Map edge nodes to face reference space
|
||||
IntegrationRule face_ir(edge_el->GetDof());
|
||||
LocEdge.Transform(edge_el->GetNodes(), face_ir);
|
||||
|
||||
// Then, map from face to element
|
||||
IntegrationPointTransformation Loc1;
|
||||
GetLocalFaceTransformation(face_type,
|
||||
GetElementType(face_info.Elem1No),
|
||||
Loc1.Transf, face_info.Elem1Inf);
|
||||
|
||||
IntegrationRule elem_ir(edge_el->GetDof());
|
||||
Loc1.Transf.ElementNo = face_info.Elem1No;
|
||||
Loc1.Transf.ElementType = ElementTransformation::ELEMENT;
|
||||
Loc1.Transf.mesh = this;
|
||||
Loc1.Transform(face_ir, elem_ir);
|
||||
|
||||
// Finally, get the physical coordinates
|
||||
Nodes->GetVectorValues(Loc1.Transf, elem_ir, pm);
|
||||
|
||||
EdTr->SetFE(edge_el);
|
||||
}
|
||||
}
|
||||
}
|
||||
@@ -1824,8 +1899,8 @@ void Mesh::Init()
|
||||
|
||||
void Mesh::InitTables()
|
||||
{
|
||||
el_to_edge =
|
||||
el_to_face = el_to_el = bel_to_edge = face_edge = edge_vertex = NULL;
|
||||
el_to_edge = el_to_face = el_to_el = bel_to_edge = NULL;
|
||||
face_edge = edge_face = edge_vertex = NULL;
|
||||
face_to_elem = NULL;
|
||||
}
|
||||
|
||||
@@ -1848,6 +1923,7 @@ void Mesh::DestroyTables()
|
||||
}
|
||||
|
||||
delete face_edge;
|
||||
delete edge_face;
|
||||
delete edge_vertex;
|
||||
|
||||
delete face_to_elem;
|
||||
@@ -1921,6 +1997,7 @@ void Mesh::ResetLazyData()
|
||||
{
|
||||
delete el_to_el; el_to_el = NULL;
|
||||
delete face_edge; face_edge = NULL;
|
||||
delete edge_face; edge_face = NULL;
|
||||
delete face_to_elem; face_to_elem = NULL;
|
||||
delete edge_vertex; edge_vertex = NULL;
|
||||
DeleteGeometricFactors();
|
||||
@@ -2845,6 +2922,7 @@ void Mesh::ReorderElements(const Array<int> &ordering, bool reorder_vertices)
|
||||
// boundary element ordering
|
||||
// - el_to_el - no need to rebuild
|
||||
// - face_edge - no need to rebuild
|
||||
// - edge_face - no need to rebuild
|
||||
// - edge_vertex - no need to rebuild
|
||||
// - geom_factors - no need to rebuild
|
||||
|
||||
@@ -3327,11 +3405,25 @@ void Mesh::DoNodeReorder(DSTable *old_v_to_v, Table *old_elem_vert)
|
||||
// loop over all elements
|
||||
for (int i = 0; i < GetNE(); i++)
|
||||
{
|
||||
fes->GetElementInteriorDofs(i, old_dofs);
|
||||
// No need to permute the dofs if there are fewer than two
|
||||
if (old_dofs.Size() < 2)
|
||||
{
|
||||
offset += old_dofs.Size();
|
||||
continue;
|
||||
}
|
||||
|
||||
const int *old_v = old_elem_vert->GetRow(i);
|
||||
const int *new_v = elements[i]->GetVertices();
|
||||
const int *dof_ord;
|
||||
int new_or;
|
||||
const Geometry::Type geom = elements[i]->GetGeometryType();
|
||||
if (geom == Geometry::CUBE || geom == Geometry::PRISM ||
|
||||
geom == Geometry::PYRAMID)
|
||||
{
|
||||
offset += old_dofs.Size();
|
||||
continue;
|
||||
}
|
||||
switch (geom)
|
||||
{
|
||||
case Geometry::SEGMENT:
|
||||
@@ -3355,9 +3447,8 @@ void Mesh::DoNodeReorder(DSTable *old_v_to_v, Table *old_elem_vert)
|
||||
dof_ord = fec->DofOrderForOrientation(geom, new_or);
|
||||
MFEM_VERIFY(dof_ord != NULL,
|
||||
"FE collection '" << fec->Name()
|
||||
<< "' does not define reordering for "
|
||||
<< "' does not define reordering (" << new_or << ") for "
|
||||
<< Geometry::Name[geom] << " elements!");
|
||||
fes->GetElementInteriorDofs(i, old_dofs);
|
||||
new_dofs.SetSize(old_dofs.Size());
|
||||
for (int j = 0; j < new_dofs.Size(); j++)
|
||||
{
|
||||
@@ -4585,8 +4676,9 @@ Mesh::Mesh(const Mesh &mesh, bool copy_nodes)
|
||||
// Do NOT copy the element-to-element Table, el_to_el
|
||||
el_to_el = NULL;
|
||||
|
||||
// Do NOT copy the face-to-edge Table, face_edge
|
||||
// Do NOT copy the face-to-edge Table, face_edge and edge_face
|
||||
face_edge = NULL;
|
||||
edge_face = NULL;
|
||||
face_to_elem = NULL;
|
||||
|
||||
// Copy the edge-to-vertex Table, edge_vertex
|
||||
@@ -7116,7 +7208,8 @@ const FiniteElementSpace *Mesh::GetNodalFESpace() const
|
||||
return ((Nodes) ? Nodes->FESpace() : NULL);
|
||||
}
|
||||
|
||||
void Mesh::SetCurvature(int order, bool discont, int space_dim, int ordering)
|
||||
void Mesh::SetCurvature(int order, bool discont, int space_dim, int ordering,
|
||||
int pyr_type)
|
||||
{
|
||||
if (order <= 0)
|
||||
{
|
||||
@@ -7129,11 +7222,12 @@ void Mesh::SetCurvature(int order, bool discont, int space_dim, int ordering)
|
||||
if (discont)
|
||||
{
|
||||
const int type = 1; // Gauss-Lobatto points
|
||||
nfec = new L2_FECollection(order, Dim, type);
|
||||
nfec = new L2_FECollection(order, Dim, type, FiniteElement::VALUE,
|
||||
pyr_type);
|
||||
}
|
||||
else
|
||||
{
|
||||
nfec = new H1_FECollection(order, Dim);
|
||||
nfec = new H1_FECollection(order, Dim, BasisType::GaussLobatto, pyr_type);
|
||||
}
|
||||
FiniteElementSpace* nfes = new FiniteElementSpace(this, nfec, space_dim,
|
||||
ordering);
|
||||
@@ -8079,6 +8173,22 @@ Table *Mesh::GetFaceEdgeTable() const
|
||||
return (face_edge);
|
||||
}
|
||||
|
||||
Table *Mesh::GetEdgeFaceTable() const
|
||||
{
|
||||
if (edge_face)
|
||||
{
|
||||
return edge_face;
|
||||
}
|
||||
|
||||
if (Dim != 3)
|
||||
{
|
||||
return NULL;
|
||||
}
|
||||
|
||||
edge_face = Transpose(*GetFaceEdgeTable());
|
||||
return edge_face;
|
||||
}
|
||||
|
||||
Table *Mesh::GetEdgeVertexTable() const
|
||||
{
|
||||
if (edge_vertex)
|
||||
@@ -11437,6 +11547,7 @@ void Mesh::Swap(Mesh& other, bool non_geometry)
|
||||
mfem::Swap(bel_to_edge, other.bel_to_edge);
|
||||
mfem::Swap(be_to_face, other.be_to_face);
|
||||
mfem::Swap(face_edge, other.face_edge);
|
||||
mfem::Swap(edge_face, other.edge_face);
|
||||
mfem::Swap(face_to_elem, other.face_to_elem);
|
||||
mfem::Swap(edge_vertex, other.edge_vertex);
|
||||
|
||||
|
||||
+15
-4
@@ -250,16 +250,18 @@ protected:
|
||||
Table *bel_to_edge; // for 3D only
|
||||
|
||||
// Note that the following tables are owned by this class and should not be
|
||||
// deleted by the caller. Of these three tables, only face_edge and
|
||||
// deleted by the caller. Of these four tables, only face_edge, edge_face and
|
||||
// edge_vertex are returned by access functions.
|
||||
mutable Table *face_to_elem; // Used by FindFaceNeighbors, not returned.
|
||||
mutable Table *face_edge; // Returned by GetFaceEdgeTable().
|
||||
mutable Table *edge_face; // Returned by GetEdgeFaceTable().
|
||||
mutable Table *edge_vertex; // Returned by GetEdgeVertexTable().
|
||||
|
||||
IsoparametricTransformation Transformation, Transformation2;
|
||||
IsoparametricTransformation BdrTransformation;
|
||||
IsoparametricTransformation FaceTransformation, EdgeTransformation;
|
||||
FaceElementTransformations FaceElemTr;
|
||||
mutable std::unique_ptr<L2_SegmentElement> EdgeTransfElement;
|
||||
|
||||
// refinement embeddings for forward compatibility with NCMesh
|
||||
mutable CoarseFineTransformations CoarseFineTr;
|
||||
@@ -1731,6 +1733,11 @@ public:
|
||||
/// @note The returned object should NOT be deleted by the caller.
|
||||
Table *GetFaceEdgeTable() const;
|
||||
|
||||
/// Returns the edge-to-face Table (3D)
|
||||
///
|
||||
/// @note The returned object should NOT be deleted by the caller.
|
||||
Table *GetEdgeFaceTable() const;
|
||||
|
||||
/// Returns the edge-to-vertex Table (3D)
|
||||
///
|
||||
/// @note The returned object should NOT be deleted by the caller.
|
||||
@@ -2425,9 +2432,13 @@ public:
|
||||
finite element space (continuous is default).
|
||||
@param[in] space_dim The space dimension (optional).
|
||||
@param[in] ordering The Ordering of the finite element space
|
||||
(Ordering::byVDIM is the default). */
|
||||
virtual void SetCurvature(int order, bool discont = false, int space_dim = -1,
|
||||
int ordering = 1);
|
||||
(Ordering::byVDIM is the default).
|
||||
@param[in] pyr_type Select Bergot (pyr_type = 0) or Fuentes
|
||||
(pyr_type = 1) basis functions for pyramid
|
||||
shaped elements. */
|
||||
virtual void SetCurvature(int order, bool discont = false,
|
||||
int space_dim = -1, int ordering = 1,
|
||||
int pyr_type = 1);
|
||||
|
||||
/// @}
|
||||
|
||||
|
||||
@@ -1354,22 +1354,27 @@ NURBSPatch::NURBSPatch(std::istream &input)
|
||||
int pdim, dim, size = 1;
|
||||
string ident;
|
||||
|
||||
skip_comment_lines(input, '#');
|
||||
input >> ws >> ident >> pdim; // knotvectors
|
||||
kv.SetSize(pdim);
|
||||
for (int i = 0; i < pdim; i++)
|
||||
{
|
||||
skip_comment_lines(input, '#');
|
||||
kv[i] = new KnotVector(input);
|
||||
size *= kv[i]->GetNCP();
|
||||
}
|
||||
|
||||
skip_comment_lines(input, '#');
|
||||
input >> ws >> ident >> dim; // dimension
|
||||
init(dim + 1);
|
||||
|
||||
skip_comment_lines(input, '#');
|
||||
input >> ws >> ident; // controlpoints (homogeneous coordinates)
|
||||
if (ident == "controlpoints" || ident == "controlpoints_homogeneous")
|
||||
{
|
||||
for (int j = 0, i = 0; i < size; i++)
|
||||
{
|
||||
skip_comment_lines(input, '#');
|
||||
for (int d = 0; d <= dim; d++, j++)
|
||||
{
|
||||
input >> data[j];
|
||||
@@ -1380,6 +1385,7 @@ NURBSPatch::NURBSPatch(std::istream &input)
|
||||
{
|
||||
for (int j = 0, i = 0; i < size; i++)
|
||||
{
|
||||
skip_comment_lines(input, '#');
|
||||
for (int d = 0; d <= dim; d++)
|
||||
{
|
||||
input >> data[j+d];
|
||||
|
||||
+12
-3
@@ -2031,18 +2031,20 @@ std::unique_ptr<ParGridFunction> ParMesh::GetJacobianDeterminantGF() const
|
||||
return detgf;
|
||||
}
|
||||
|
||||
void ParMesh::SetCurvature(int order, bool discont, int space_dim, int ordering)
|
||||
void ParMesh::SetCurvature(int order, bool discont, int space_dim, int ordering,
|
||||
int pyrtype)
|
||||
{
|
||||
DeleteFaceNbrData();
|
||||
space_dim = (space_dim == -1) ? spaceDim : space_dim;
|
||||
FiniteElementCollection* nfec;
|
||||
if (discont)
|
||||
{
|
||||
nfec = new L2_FECollection(order, Dim, BasisType::GaussLobatto);
|
||||
nfec = new L2_FECollection(order, Dim, BasisType::GaussLobatto,
|
||||
FiniteElement::VALUE, pyrtype);
|
||||
}
|
||||
else
|
||||
{
|
||||
nfec = new H1_FECollection(order, Dim);
|
||||
nfec = new H1_FECollection(order, Dim, BasisType::GaussLobatto, pyrtype);
|
||||
}
|
||||
ParFiniteElementSpace* nfes = new ParFiniteElementSpace(this, nfec, space_dim,
|
||||
ordering);
|
||||
@@ -4864,6 +4866,13 @@ void ParMesh::Print(std::ostream &os, const std::string &comments) const
|
||||
return;
|
||||
}
|
||||
|
||||
if (pncmesh && pncmesh->using_scaling)
|
||||
{
|
||||
// For nodes scaling, we write the file in the format MFEM NC mesh v1.1.
|
||||
Printer(os, "", comments);
|
||||
return;
|
||||
}
|
||||
|
||||
const Array<int>* s2l_face;
|
||||
if (!pncmesh)
|
||||
{
|
||||
|
||||
+1
-1
@@ -563,7 +563,7 @@ public:
|
||||
void ExchangeFaceNbrNodes();
|
||||
|
||||
void SetCurvature(int order, bool discont = false, int space_dim = -1,
|
||||
int ordering = 1) override;
|
||||
int ordering = 1, int pyrtype = 1) override;
|
||||
|
||||
std::unique_ptr<ParGridFunction> GetJacobianDeterminantGF() const;
|
||||
|
||||
|
||||
+123
-55
@@ -28,6 +28,48 @@ namespace mfem
|
||||
|
||||
using namespace bin_io;
|
||||
|
||||
static int GetHexEdgeSplit(const int* nodes, int v1, int v2);
|
||||
|
||||
static bool SameSplitScale(real_t a, real_t b)
|
||||
{
|
||||
#ifdef MFEM_USE_DOUBLE
|
||||
constexpr real_t rel_tol = 1.0e-8;
|
||||
#else
|
||||
constexpr real_t rel_tol = 1.0e-5;
|
||||
#endif
|
||||
return std::abs(a - b) <= rel_tol *
|
||||
std::max(real_t(1.0), std::max(std::abs(a), std::abs(b)));
|
||||
}
|
||||
|
||||
static real_t DirectedHexEdgeScale(const int* nodes, const Refinement &ref,
|
||||
int v0, int v1)
|
||||
{
|
||||
const int dir = GetHexEdgeSplit(nodes, v0, v1);
|
||||
static const int split_edges[3][4][2] =
|
||||
{
|
||||
{{0, 1}, {3, 2}, {4, 5}, {7, 6}},
|
||||
{{1, 2}, {0, 3}, {5, 6}, {4, 7}},
|
||||
{{0, 4}, {1, 5}, {2, 6}, {3, 7}}
|
||||
};
|
||||
|
||||
for (int i = 0; i < 4; i++)
|
||||
{
|
||||
const int a = nodes[split_edges[dir][i][0]];
|
||||
const int b = nodes[split_edges[dir][i][1]];
|
||||
if (a == v0 && b == v1)
|
||||
{
|
||||
return ref.s[dir];
|
||||
}
|
||||
if (a == v1 && b == v0)
|
||||
{
|
||||
return 1.0 - ref.s[dir];
|
||||
}
|
||||
}
|
||||
|
||||
MFEM_ABORT("Shared face edge does not match the refinement direction.");
|
||||
return 0.0;
|
||||
}
|
||||
|
||||
ParNCMesh::ParNCMesh(MPI_Comm comm, const NCMesh &ncmesh,
|
||||
const int *partitioning)
|
||||
: NCMesh(ncmesh)
|
||||
@@ -1555,7 +1597,7 @@ bool ParNCMesh::AnisotropicConflict(const Array<Refinement> &refinements,
|
||||
ElementNeighborProcessors(elem, ranks);
|
||||
for (int j = 0; j < ranks.Size(); j++)
|
||||
{
|
||||
send_ref[ranks[j]].AddRefinement(elem, ref.GetType());
|
||||
send_ref[ranks[j]].AddRefinement(elem, ref);
|
||||
}
|
||||
}
|
||||
|
||||
@@ -1576,8 +1618,8 @@ bool ParNCMesh::AnisotropicConflict(const Array<Refinement> &refinements,
|
||||
for (int i = 0; i < refinements.Size(); i++)
|
||||
{
|
||||
const Refinement &ref = refinements[i];
|
||||
CheckRefinement(leaf_elements[ref.index], ref.GetType(), refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefinement(leaf_elements[ref.index], ref, refinements, elemToRef,
|
||||
conflicts);
|
||||
}
|
||||
|
||||
// Receive (ghost layer) refinements from all neighbors
|
||||
@@ -1593,7 +1635,9 @@ bool ParNCMesh::AnisotropicConflict(const Array<Refinement> &refinements,
|
||||
// check the ghost refinements
|
||||
for (int i = 0; i < msg.Size(); i++)
|
||||
{
|
||||
CheckRefinement(msg.elements[i], msg.values[i], refinements, elemToRef,
|
||||
Refinement ghost_ref(msg.elements[i], msg.values[i].ref_type);
|
||||
ghost_ref.SetScaleForType(msg.values[i].scale);
|
||||
CheckRefinement(msg.elements[i], ghost_ref, refinements, elemToRef,
|
||||
conflicts);
|
||||
}
|
||||
}
|
||||
@@ -1749,7 +1793,7 @@ int FindHexFace(const int* no, int vn1, int vn2, int vn3, int vn4)
|
||||
|
||||
// Assumption: v1 and v2 are indices of hex vertices connected by an edge.
|
||||
// The return value is {0,1,2} denoting split {X,Y,Z}.
|
||||
int GetHexEdgeSplit(const int* nodes, int v1, int v2)
|
||||
static int GetHexEdgeSplit(const int* nodes, int v1, int v2)
|
||||
{
|
||||
Array<int> v(2);
|
||||
v[0] = v1;
|
||||
@@ -1780,7 +1824,8 @@ int GetHexEdgeSplit(const int* nodes, int v1, int v2)
|
||||
return edgeDir[edge];
|
||||
}
|
||||
|
||||
void ParNCMesh::CheckRefAnisoFace(int elem, int vn1, int vn2, int vn3, int vn4,
|
||||
void ParNCMesh::CheckRefAnisoFace(const Refinement &ref, int elem,
|
||||
int vn1, int vn2, int vn3, int vn4,
|
||||
const Array<Refinement> &refinements,
|
||||
const std::map<int, int> &elemToRef,
|
||||
std::set<int> &conflicts)
|
||||
@@ -1798,11 +1843,11 @@ void ParNCMesh::CheckRefAnisoFace(int elem, int vn1, int vn2, int vn3, int vn4,
|
||||
if (elemToRef.count(nghbIndex) > 0)
|
||||
{
|
||||
const int refIndex = elemToRef.at(nghbIndex);
|
||||
const Refinement& ref = refinements[refIndex];
|
||||
const Refinement& nghb_ref = refinements[refIndex];
|
||||
|
||||
bool refDir[3];
|
||||
for (int i=0; i<3; ++i)
|
||||
refDir[i] = ref.s[i] > real_t{0};
|
||||
refDir[i] = nghb_ref.s[i] > real_t{0};
|
||||
|
||||
const int localFace = FindHexFace(nghb.node, vn1, vn2, vn3, vn4);
|
||||
const int faceDir = GetHexFaceDir(localFace);
|
||||
@@ -1834,30 +1879,50 @@ void ParNCMesh::CheckRefAnisoFace(int elem, int vn1, int vn2, int vn3, int vn4,
|
||||
MFEM_ASSERT(cnt == 2 && hexSplitOnFace >= 0, "");
|
||||
|
||||
const int edgeSplit = GetHexEdgeSplit(nghb.node, vn1, vn2);
|
||||
if (edgeSplit != hexSplitOnFace) { conflicts.insert(refIndex); }
|
||||
if (edgeSplit != hexSplitOnFace)
|
||||
{
|
||||
conflicts.insert(refIndex);
|
||||
}
|
||||
else
|
||||
{
|
||||
const real_t elem_scale =
|
||||
DirectedHexEdgeScale(elements[elem].node, ref, vn1, vn2);
|
||||
const real_t nghb_scale =
|
||||
DirectedHexEdgeScale(nghb.node, nghb_ref, vn1, vn2);
|
||||
if (!SameSplitScale(elem_scale, nghb_scale))
|
||||
{
|
||||
conflicts.insert(refIndex);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
// The else case is that the neighbor is not refined, so there is no need to
|
||||
// check for conflicts.
|
||||
}
|
||||
|
||||
void ParNCMesh::CheckRefIsoFace(int elem, int vn1, int vn2, int vn3, int vn4,
|
||||
void ParNCMesh::CheckRefIsoFace(const Refinement &ref, int elem,
|
||||
int vn1, int vn2, int vn3, int vn4,
|
||||
int en1, int en2, int en3, int en4,
|
||||
const Array<Refinement> &refinements,
|
||||
const std::map<int, int> &elemToRef,
|
||||
std::set<int> &conflicts)
|
||||
{
|
||||
CheckRefAnisoFace(elem, vn1, vn2, en2, en4, refinements, elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, en4, en2, vn3, vn4, refinements, elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, vn4, vn1, en1, en3, refinements, elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, en3, en1, vn2, vn3, refinements, elemToRef, conflicts);
|
||||
CheckRefAnisoFace(ref, elem, vn1, vn2, en2, en4, refinements, elemToRef,
|
||||
conflicts);
|
||||
CheckRefAnisoFace(ref, elem, en4, en2, vn3, vn4, refinements, elemToRef,
|
||||
conflicts);
|
||||
CheckRefAnisoFace(ref, elem, vn4, vn1, en1, en3, refinements, elemToRef,
|
||||
conflicts);
|
||||
CheckRefAnisoFace(ref, elem, en3, en1, vn2, vn3, refinements, elemToRef,
|
||||
conflicts);
|
||||
}
|
||||
|
||||
void ParNCMesh::CheckRefinement(int elem, char ref_type,
|
||||
void ParNCMesh::CheckRefinement(int elem, const Refinement &ref,
|
||||
const Array<Refinement> &refinements,
|
||||
const std::map<int, int> &elemToRef,
|
||||
std::set<int> &conflicts)
|
||||
{
|
||||
const char ref_type = ref.GetType();
|
||||
const Element &el = elements[elem];
|
||||
MFEM_ASSERT(el.geom == Geometry::CUBE && el.ref_type == 0,
|
||||
"Element must be an unrefined hexahedron");
|
||||
@@ -1868,46 +1933,46 @@ void ParNCMesh::CheckRefinement(int elem, char ref_type,
|
||||
// This follows the logic of NCMesh::RefineElement().
|
||||
if (ref_type == Refinement::X) // split along X axis
|
||||
{
|
||||
CheckRefAnisoFace(elem, no[0], no[1], no[5], no[4], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[0], no[1], no[5], no[4], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[2], no[3], no[7], no[6], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[2], no[3], no[7], no[6], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[4], no[5], no[6], no[7], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[4], no[5], no[6], no[7], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[3], no[2], no[1], no[0], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[3], no[2], no[1], no[0], refinements,
|
||||
elemToRef, conflicts);
|
||||
}
|
||||
else if (ref_type == Refinement::Y) // split along Y axis
|
||||
{
|
||||
CheckRefAnisoFace(elem, no[1], no[2], no[6], no[5], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[1], no[2], no[6], no[5], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[3], no[0], no[4], no[7], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[3], no[0], no[4], no[7], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[5], no[6], no[7], no[4], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[5], no[6], no[7], no[4], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[0], no[3], no[2], no[1], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[0], no[3], no[2], no[1], refinements,
|
||||
elemToRef, conflicts);
|
||||
}
|
||||
else if (ref_type == Refinement::Z) // split along Z axis
|
||||
{
|
||||
CheckRefAnisoFace(elem, no[4], no[0], no[1], no[5], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[4], no[0], no[1], no[5], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[5], no[1], no[2], no[6], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[5], no[1], no[2], no[6], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[6], no[2], no[3], no[7], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[6], no[2], no[3], no[7], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[7], no[3], no[0], no[4], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[7], no[3], no[0], no[4], refinements,
|
||||
elemToRef, conflicts);
|
||||
}
|
||||
else if (ref_type == Refinement::XY) // XY split
|
||||
{
|
||||
CheckRefAnisoFace(elem, no[0], no[1], no[5], no[4], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[0], no[1], no[5], no[4], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[1], no[2], no[6], no[5], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[1], no[2], no[6], no[5], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[2], no[3], no[7], no[6], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[2], no[3], no[7], no[6], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[3], no[0], no[4], no[7], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[3], no[0], no[4], no[7], refinements,
|
||||
elemToRef, conflicts);
|
||||
|
||||
const int mid01 = GetMidEdgeNode(no[0], no[1]);
|
||||
@@ -1920,20 +1985,20 @@ void ParNCMesh::CheckRefinement(int elem, char ref_type,
|
||||
const int mid67 = GetMidEdgeNode(no[6], no[7]);
|
||||
const int mid74 = GetMidEdgeNode(no[7], no[4]);
|
||||
|
||||
CheckRefIsoFace(elem, no[3], no[2], no[1], no[0], mid23, mid12, mid01,
|
||||
CheckRefIsoFace(ref, elem, no[3], no[2], no[1], no[0], mid23, mid12, mid01,
|
||||
mid30, refinements, elemToRef, conflicts);
|
||||
CheckRefIsoFace(elem, no[4], no[5], no[6], no[7], mid45, mid56, mid67,
|
||||
CheckRefIsoFace(ref, elem, no[4], no[5], no[6], no[7], mid45, mid56, mid67,
|
||||
mid74, refinements, elemToRef, conflicts);
|
||||
}
|
||||
else if (ref_type == Refinement::XZ) // XZ split
|
||||
{
|
||||
CheckRefAnisoFace(elem, no[3], no[2], no[1], no[0], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[3], no[2], no[1], no[0], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[2], no[6], no[5], no[1], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[2], no[6], no[5], no[1], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[6], no[7], no[4], no[5], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[6], no[7], no[4], no[5], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[7], no[3], no[0], no[4], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[7], no[3], no[0], no[4], refinements,
|
||||
elemToRef, conflicts);
|
||||
|
||||
const int mid01 = GetMidEdgeNode(no[0], no[1]);
|
||||
@@ -1946,9 +2011,9 @@ void ParNCMesh::CheckRefinement(int elem, char ref_type,
|
||||
const int mid26 = GetMidEdgeNode(no[2], no[6]);
|
||||
const int mid37 = GetMidEdgeNode(no[3], no[7]);
|
||||
|
||||
CheckRefIsoFace(elem, no[0], no[1], no[5], no[4], mid01, mid15, mid45,
|
||||
CheckRefIsoFace(ref, elem, no[0], no[1], no[5], no[4], mid01, mid15, mid45,
|
||||
mid04, refinements, elemToRef, conflicts);
|
||||
CheckRefIsoFace(elem, no[2], no[3], no[7], no[6], mid23, mid37, mid67,
|
||||
CheckRefIsoFace(ref, elem, no[2], no[3], no[7], no[6], mid23, mid37, mid67,
|
||||
mid26, refinements, elemToRef, conflicts);
|
||||
}
|
||||
else if (ref_type == Refinement::YZ) // YZ split
|
||||
@@ -1963,18 +2028,18 @@ void ParNCMesh::CheckRefinement(int elem, char ref_type,
|
||||
const int mid26 = GetMidEdgeNode(no[2], no[6]);
|
||||
const int mid37 = GetMidEdgeNode(no[3], no[7]);
|
||||
|
||||
CheckRefAnisoFace(elem, no[4], no[0], no[1], no[5], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[4], no[0], no[1], no[5], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[0], no[3], no[2], no[1], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[0], no[3], no[2], no[1], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[3], no[7], no[6], no[2], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[3], no[7], no[6], no[2], refinements,
|
||||
elemToRef, conflicts);
|
||||
CheckRefAnisoFace(elem, no[7], no[4], no[5], no[6], refinements,
|
||||
CheckRefAnisoFace(ref, elem, no[7], no[4], no[5], no[6], refinements,
|
||||
elemToRef, conflicts);
|
||||
|
||||
CheckRefIsoFace(elem, no[1], no[2], no[6], no[5], mid12, mid26, mid56,
|
||||
CheckRefIsoFace(ref, elem, no[1], no[2], no[6], no[5], mid12, mid26, mid56,
|
||||
mid15, refinements, elemToRef, conflicts);
|
||||
CheckRefIsoFace(elem, no[3], no[0], no[4], no[7], mid30, mid04, mid74,
|
||||
CheckRefIsoFace(ref, elem, no[3], no[0], no[4], no[7], mid30, mid04, mid74,
|
||||
mid37, refinements, elemToRef, conflicts);
|
||||
}
|
||||
else if (ref_type == Refinement::XYZ) // XYZ split
|
||||
@@ -1994,17 +2059,17 @@ void ParNCMesh::CheckRefinement(int elem, char ref_type,
|
||||
const int mid26 = GetMidEdgeNode(no[2], no[6]);
|
||||
const int mid37 = GetMidEdgeNode(no[3], no[7]);
|
||||
|
||||
CheckRefIsoFace(elem, no[3], no[2], no[1], no[0], mid23, mid12, mid01,
|
||||
CheckRefIsoFace(ref, elem, no[3], no[2], no[1], no[0], mid23, mid12, mid01,
|
||||
mid30, refinements, elemToRef, conflicts);
|
||||
CheckRefIsoFace(elem, no[0], no[1], no[5], no[4], mid01, mid15, mid45,
|
||||
CheckRefIsoFace(ref, elem, no[0], no[1], no[5], no[4], mid01, mid15, mid45,
|
||||
mid04, refinements, elemToRef, conflicts);
|
||||
CheckRefIsoFace(elem, no[1], no[2], no[6], no[5], mid12, mid26, mid56,
|
||||
CheckRefIsoFace(ref, elem, no[1], no[2], no[6], no[5], mid12, mid26, mid56,
|
||||
mid15, refinements, elemToRef, conflicts);
|
||||
CheckRefIsoFace(elem, no[2], no[3], no[7], no[6], mid23, mid37, mid67,
|
||||
CheckRefIsoFace(ref, elem, no[2], no[3], no[7], no[6], mid23, mid37, mid67,
|
||||
mid26, refinements, elemToRef, conflicts);
|
||||
CheckRefIsoFace(elem, no[3], no[0], no[4], no[7], mid30, mid04, mid74,
|
||||
CheckRefIsoFace(ref, elem, no[3], no[0], no[4], no[7], mid30, mid04, mid74,
|
||||
mid37, refinements, elemToRef, conflicts);
|
||||
CheckRefIsoFace(elem, no[4], no[5], no[6], no[7], mid45, mid56, mid67,
|
||||
CheckRefIsoFace(ref, elem, no[4], no[5], no[6], no[7], mid45, mid56, mid67,
|
||||
mid74, refinements, elemToRef, conflicts);
|
||||
}
|
||||
else
|
||||
@@ -2053,7 +2118,7 @@ void ParNCMesh::Refine(const Array<Refinement> &refinements)
|
||||
ElementNeighborProcessors(elem, ranks);
|
||||
for (int j = 0; j < ranks.Size(); j++)
|
||||
{
|
||||
send_ref[ranks[j]].AddRefinement(elem, ref.GetType());
|
||||
send_ref[ranks[j]].AddRefinement(elem, ref);
|
||||
}
|
||||
}
|
||||
|
||||
@@ -2063,8 +2128,9 @@ void ParNCMesh::Refine(const Array<Refinement> &refinements)
|
||||
// do local refinements
|
||||
for (int i = 0; i < refinements.Size(); i++)
|
||||
{
|
||||
const Refinement &ref = refinements[i];
|
||||
NCMesh::RefineElement(leaf_elements[ref.index], ref.GetType());
|
||||
Refinement ref_i = refinements[i];
|
||||
ref_i.index = leaf_elements[refinements[i].index];
|
||||
NCMesh::RefineElement(ref_i);
|
||||
}
|
||||
|
||||
// receive (ghost layer) refinements from all neighbors
|
||||
@@ -2080,7 +2146,9 @@ void ParNCMesh::Refine(const Array<Refinement> &refinements)
|
||||
// do the ghost refinements
|
||||
for (int i = 0; i < msg.Size(); i++)
|
||||
{
|
||||
NCMesh::RefineElement(msg.elements[i], msg.values[i]);
|
||||
Refinement ghost_ref(msg.elements[i], msg.values[i].ref_type);
|
||||
ghost_ref.SetScaleForType(msg.values[i].scale);
|
||||
NCMesh::RefineElement(ghost_ref);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
+25
-8
@@ -497,11 +497,27 @@ protected: // implementation
|
||||
/** Used by ParNCMesh::Refine() to inform neighbors about refinements at
|
||||
* the processor boundary. This keeps their ghost layers synchronized.
|
||||
*/
|
||||
class NeighborRefinementMessage : public ElementValueMessage<char, false,
|
||||
VarMessageTag::NEIGHBOR_REFINEMENT_VM>
|
||||
struct NeighborRefinement
|
||||
{
|
||||
char ref_type;
|
||||
real_t scale[3];
|
||||
};
|
||||
|
||||
class NeighborRefinementMessage
|
||||
: public ElementValueMessage<NeighborRefinement, false,
|
||||
VarMessageTag::NEIGHBOR_REFINEMENT_VM>
|
||||
{
|
||||
public:
|
||||
void AddRefinement(int elem, char ref_type) { Add(elem, ref_type); }
|
||||
void AddRefinement(int elem, const Refinement &ref)
|
||||
{
|
||||
NeighborRefinement data{};
|
||||
data.ref_type = ref.GetType();
|
||||
for (int i = 0; i < 3; i++)
|
||||
{
|
||||
data.scale[i] = ref.s[i];
|
||||
}
|
||||
Add(elem, data);
|
||||
}
|
||||
typedef std::map<int, NeighborRefinementMessage> Map;
|
||||
};
|
||||
|
||||
@@ -602,7 +618,8 @@ protected: // implementation
|
||||
/** For the face with ordered vertices vn* and neighboring element @a elem,
|
||||
check whether the other neighboring element (if it exists) is marked for
|
||||
a horizontal refinement conflicting with a vertical split. */
|
||||
void CheckRefAnisoFace(int elem, int vn1, int vn2, int vn3, int vn4,
|
||||
void CheckRefAnisoFace(const Refinement &ref, int elem,
|
||||
int vn1, int vn2, int vn3, int vn4,
|
||||
const Array<Refinement> &refinements,
|
||||
const std::map<int, int> &elemToRef,
|
||||
std::set<int> &conflicts);
|
||||
@@ -611,7 +628,8 @@ protected: // implementation
|
||||
neighboring element @a elem, check whether the other neighboring element
|
||||
(if it exists) is marked for a refinement conflicting with an isotropic
|
||||
refinement of the face. */
|
||||
void CheckRefIsoFace(int elem, int vn1, int vn2, int vn3, int vn4,
|
||||
void CheckRefIsoFace(const Refinement &ref, int elem,
|
||||
int vn1, int vn2, int vn3, int vn4,
|
||||
int en1, int en2, int en3, int en4,
|
||||
const Array<Refinement> &refinements,
|
||||
const std::map<int, int> &elemToRef,
|
||||
@@ -622,9 +640,8 @@ protected: // implementation
|
||||
const std::map<int, int> &elemToRef,
|
||||
std::set<int> &conflicts);
|
||||
|
||||
/** Check whether the refinement of the element with index @a elem and type
|
||||
@a ref_type would cause a conflict. */
|
||||
void CheckRefinement(int elem, char ref_type,
|
||||
/// Check whether the input refinement would cause a conflict.
|
||||
void CheckRefinement(int elem, const Refinement &ref,
|
||||
const Array<Refinement> &refinements,
|
||||
const std::map<int, int> &elemToRef,
|
||||
std::set<int> &conflicts);
|
||||
|
||||
@@ -22,7 +22,6 @@ add_subdirectory(common)
|
||||
add_subdirectory(contact)
|
||||
add_subdirectory(dfem)
|
||||
add_subdirectory(diag-smoothers)
|
||||
add_subdirectory(multiapp)
|
||||
add_subdirectory(dpg)
|
||||
add_subdirectory(electromagnetics)
|
||||
add_subdirectory(fluids/navier)
|
||||
|
||||
@@ -80,8 +80,6 @@ public:
|
||||
// limitations
|
||||
void MultRT_2D(const Vector &x, Vector &y, Mode mode) const;
|
||||
void MultRT_3D(const Vector &x, Vector &y, Mode mode) const;
|
||||
// suppress warning about hiding overloaded virtual function:
|
||||
using Operator::Mult;
|
||||
};
|
||||
|
||||
} // namespace mfem
|
||||
|
||||
@@ -151,6 +151,10 @@ if (MFEM_USE_MPI)
|
||||
MAIN phpref.cpp
|
||||
LIBRARIES mfem)
|
||||
|
||||
add_mfem_miniapp(pref321
|
||||
MAIN pref321.cpp
|
||||
LIBRARIES mfem)
|
||||
|
||||
# Add parallel tests.
|
||||
if (MFEM_ENABLE_TESTING)
|
||||
set(PARALLEL_TESTS
|
||||
@@ -160,6 +164,7 @@ if (MFEM_USE_MPI)
|
||||
fit-node-position
|
||||
pminimal-surface
|
||||
phpref
|
||||
pref321
|
||||
)
|
||||
# Meshing miniapps that return MFEM_SKIP_RETURN_VALUE in some cases:
|
||||
set(SKIP_TESTS)
|
||||
|
||||
@@ -24,7 +24,7 @@ SEQ_MINIAPPS = mobius-strip klein-bottle toroid trimmer twist mesh-explorer\
|
||||
shaper extruder mesh-optimizer minimal-surface polar-nc reflector\
|
||||
ref321 mesh-quality hpref
|
||||
PAR_MINIAPPS = pmesh-optimizer pminimal-surface pmesh-fitting fit-node-position\
|
||||
phpref mesh-bounding-boxes
|
||||
phpref pref321 mesh-bounding-boxes
|
||||
ifeq ($(MFEM_USE_MPI),NO)
|
||||
MINIAPPS = $(SEQ_MINIAPPS)
|
||||
else
|
||||
@@ -99,6 +99,8 @@ hpref-test-seq: hpref
|
||||
@$(call mfem-test,$<,, Serial hp-refinement)
|
||||
phpref-test-par: phpref
|
||||
@$(call mfem-test,$<, $(RUN_MPI), Parallel hp-refinement)
|
||||
pref321-test-par: pref321
|
||||
@$(call mfem-test,$<, $(RUN_MPI), Parallel 3:1 refinement)
|
||||
mesh-bounding-boxes-test-par: mesh-bounding-boxes
|
||||
@$(call mfem-test,$<, $(RUN_MPI), Parallel bounding boxes)
|
||||
ref321-test-seq: ref321
|
||||
|
||||
@@ -0,0 +1,336 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
//
|
||||
// -----------------------------------------------------------------
|
||||
// 3:1 Refinement Miniapp: Parallel 3:1 anisotropic mesh refinements
|
||||
// -----------------------------------------------------------------
|
||||
//
|
||||
// This miniapp performs random 3:1 refinements of a quadrilateral or hexahedral
|
||||
// mesh. A diffusion equation is solved in an H1 finite element space defined on
|
||||
// the refined mesh, and its continuity is verified across local and shared
|
||||
// faces.
|
||||
//
|
||||
// Compile with: make pref321
|
||||
//
|
||||
// Sample runs: mpirun -np 4 pref321 -mm -dim 2 -o 2 -r 100
|
||||
// mpirun -np 4 pref321 -mm -dim 3 -o 2 -r 100
|
||||
// mpirun -np 4 pref321 -m ../../data/star.mesh -o 2 -r 100
|
||||
|
||||
#include "mfem.hpp"
|
||||
#include <fstream>
|
||||
#include <iostream>
|
||||
|
||||
using namespace std;
|
||||
using namespace mfem;
|
||||
|
||||
real_t CheckH1Continuity(ParGridFunction &x);
|
||||
|
||||
// Find the two children of parent element `elem` after its refinement in one
|
||||
// direction.
|
||||
void FindChildren(const Mesh &mesh, int elem, Array<int> &children)
|
||||
{
|
||||
const CoarseFineTransformations &cf = mesh.ncmesh->GetRefinementTransforms();
|
||||
MFEM_ASSERT(mesh.GetNE() == cf.embeddings.Size(), "");
|
||||
|
||||
// Note that row `elem` of the table constructed by cf.MakeCoarseToFineTable
|
||||
// is an alternative to this global loop, but constructing the table is also
|
||||
// a global operation with global storage.
|
||||
for (int i = 0; i < mesh.GetNE(); i++)
|
||||
{
|
||||
const int p = cf.embeddings[i].parent;
|
||||
if (p == elem)
|
||||
{
|
||||
children.Append(i);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
// Refine 3:1 via 2 refinements with scalings 2/3 and 1/2.
|
||||
void Refine31(Mesh &mesh, int elem, char type)
|
||||
{
|
||||
Array<Refinement> refs; // Refinement is defined in ncmesh.hpp
|
||||
refs.Append(Refinement(elem, type, 2.0 / 3.0));
|
||||
mesh.GeneralRefinement(refs);
|
||||
|
||||
// Find the elements with parent `elem`
|
||||
Array<int> children;
|
||||
FindChildren(mesh, elem, children);
|
||||
MFEM_ASSERT(children.Size() == 2, "");
|
||||
|
||||
const int elem1 = children[0];
|
||||
|
||||
refs.SetSize(0);
|
||||
refs.Append(Refinement(elem1, type)); // Default scaling of 0.5
|
||||
mesh.GeneralRefinement(refs);
|
||||
}
|
||||
|
||||
// Randomly select elements for 3:1 refinements in random directions.
|
||||
void TestAnisoRefRandom(int num_refs, int dim, ParMesh &mesh, int myid,
|
||||
int seed = 0)
|
||||
{
|
||||
std::mt19937 gen(seed);
|
||||
for (int i = 0; i < num_refs; i++)
|
||||
{
|
||||
const int elem = gen() % mesh.GetNE();
|
||||
const int t = gen() % dim;
|
||||
auto type = t == 0 ? Refinement::X :
|
||||
(t == 1 ? Refinement::Y : Refinement::Z);
|
||||
|
||||
// In 3D, check for conflicts in the parallel refinements.
|
||||
if (dim == 3)
|
||||
{
|
||||
std::set<int> conflicts; // Indices in refs of conflicting elements
|
||||
Array<Refinement> refs;
|
||||
refs.Append(Refinement(elem, type));
|
||||
const bool conflict = mesh.AnisotropicConflict(refs, conflicts);
|
||||
if (conflict)
|
||||
{
|
||||
if (myid == 0)
|
||||
cout << "Anisotropic conflict on iteration " << i
|
||||
<< ", retrying\n";
|
||||
i--;
|
||||
continue;
|
||||
}
|
||||
}
|
||||
|
||||
Refine31(mesh, elem, type);
|
||||
}
|
||||
|
||||
mesh.EnsureNodes();
|
||||
mesh.SetScaledNCMesh();
|
||||
}
|
||||
|
||||
int main(int argc, char *argv[])
|
||||
{
|
||||
Mpi::Init(argc, argv);
|
||||
Hypre::Init();
|
||||
|
||||
const int num_procs = Mpi::WorldSize();
|
||||
const int myid = Mpi::WorldRank();
|
||||
|
||||
// 1. Parse command-line options.
|
||||
const char *mesh_file = "../../data/star.mesh";
|
||||
int order = 1;
|
||||
bool visualization = true;
|
||||
bool makeMesh = false;
|
||||
int num_refs = 1;
|
||||
int tdim = 2; // Mesh dimension for Cartesian meshes.
|
||||
|
||||
OptionsParser args(argc, argv);
|
||||
args.AddOption(&mesh_file, "-m", "--mesh",
|
||||
"Mesh file to use.");
|
||||
args.AddOption(&order, "-o", "--order",
|
||||
"Finite element order (polynomial degree).");
|
||||
args.AddOption(&visualization, "-vis", "--visualization", "-no-vis",
|
||||
"--no-visualization",
|
||||
"Enable or disable GLVis visualization.");
|
||||
args.AddOption(&makeMesh, "-mm", "--make-mesh", "-no-mm",
|
||||
"--no-make-mesh", "Create Cartesian mesh");
|
||||
args.AddOption(&tdim, "-dim", "--dimension", "Dimension for Cartesian mesh");
|
||||
args.AddOption(&num_refs, "-r", "--refs", "Number of 3:1 refinements");
|
||||
args.Parse();
|
||||
if (!args.Good())
|
||||
{
|
||||
if (myid == 0)
|
||||
{
|
||||
args.PrintUsage(cout);
|
||||
}
|
||||
return 1;
|
||||
}
|
||||
if (myid == 0)
|
||||
{
|
||||
args.PrintOptions(cout);
|
||||
}
|
||||
|
||||
// 2. Create or read the serial mesh on all ranks, then apply the same
|
||||
// deterministic 3:1 refinement sequence before partitioning it.
|
||||
Mesh mesh;
|
||||
if (makeMesh)
|
||||
{
|
||||
mesh = tdim == 3 ? Mesh::MakeCartesian3D(2, 2, 2, Element::HEXAHEDRON) :
|
||||
Mesh::MakeCartesian2D(2, 2, Element::QUADRILATERAL);
|
||||
}
|
||||
else
|
||||
{
|
||||
mesh = Mesh::LoadFromFile(mesh_file, 1, 1);
|
||||
}
|
||||
|
||||
const int dim = mesh.Dimension();
|
||||
|
||||
mesh.EnsureNCMesh();
|
||||
mesh.SetScaledNCMesh();
|
||||
|
||||
// 3. Partition the refined serial mesh.
|
||||
ParMesh pmesh(MPI_COMM_WORLD, mesh);
|
||||
mesh.Clear();
|
||||
|
||||
TestAnisoRefRandom(num_refs, dim, pmesh, myid, myid);
|
||||
|
||||
// 4. Define a parallel H1 finite element space and report its global size.
|
||||
H1_FECollection fec(order, dim);
|
||||
ParFiniteElementSpace fespace(&pmesh, &fec);
|
||||
if (myid == 0)
|
||||
{
|
||||
cout << "Number of finite element unknowns: "
|
||||
<< fespace.GlobalTrueVSize() << endl;
|
||||
}
|
||||
|
||||
// 5. Assemble and solve the Poisson problem, following ex1p.
|
||||
ParGridFunction x(&fespace);
|
||||
x = 0.0;
|
||||
|
||||
ParLinearForm b(&fespace);
|
||||
ConstantCoefficient one(1.0);
|
||||
b.AddDomainIntegrator(new DomainLFIntegrator(one));
|
||||
b.Assemble();
|
||||
|
||||
ParBilinearForm a(&fespace);
|
||||
a.AddDomainIntegrator(new DiffusionIntegrator());
|
||||
a.Assemble();
|
||||
|
||||
OperatorPtr A;
|
||||
Vector B, X;
|
||||
Array<int> ess_tdof_list;
|
||||
if (pmesh.bdr_attributes.Size())
|
||||
{
|
||||
Array<int> ess_bdr(pmesh.bdr_attributes.Max());
|
||||
ess_bdr = 0;
|
||||
pmesh.MarkExternalBoundaries(ess_bdr);
|
||||
fespace.GetEssentialTrueDofs(ess_bdr, ess_tdof_list);
|
||||
}
|
||||
|
||||
a.FormLinearSystem(ess_tdof_list, x, b, A, X, B);
|
||||
|
||||
HypreBoomerAMG M;
|
||||
CGSolver cg(MPI_COMM_WORLD);
|
||||
cg.SetPreconditioner(M);
|
||||
cg.SetOperator(*A);
|
||||
cg.SetRelTol(1e-12);
|
||||
cg.SetMaxIter(2000);
|
||||
cg.SetPrintLevel(1);
|
||||
cg.Mult(B, X);
|
||||
|
||||
a.RecoverFEMSolution(X, b, x);
|
||||
|
||||
// 6. Verify the continuity of the solution in H1 over local and shared
|
||||
// faces and compute the global maximum jump.
|
||||
const real_t h1err = CheckH1Continuity(x);
|
||||
if (myid == 0)
|
||||
{
|
||||
cout << "Error of H1 continuity: " << h1err << endl;
|
||||
}
|
||||
MFEM_VERIFY(h1err < 1.0e-7, "H1 discontinuity found");
|
||||
|
||||
// 7. Save the refined mesh and the solution in parallel. This output can
|
||||
// be viewed later using GLVis: "glvis -np <np> -m mesh -g sol".
|
||||
{
|
||||
ostringstream mesh_name, sol_name;
|
||||
mesh_name << "mesh." << setfill('0') << setw(6) << myid;
|
||||
sol_name << "sol." << setfill('0') << setw(6) << myid;
|
||||
|
||||
ofstream mesh_ofs(mesh_name.str().c_str());
|
||||
mesh_ofs.precision(8);
|
||||
pmesh.Print(mesh_ofs);
|
||||
|
||||
ofstream sol_ofs(sol_name.str().c_str());
|
||||
sol_ofs.precision(8);
|
||||
x.Save(sol_ofs);
|
||||
}
|
||||
|
||||
// 8. Send the parallel solution to GLVis.
|
||||
if (visualization)
|
||||
{
|
||||
char vishost[] = "localhost";
|
||||
int visport = 19916;
|
||||
socketstream sol_sock(vishost, visport);
|
||||
sol_sock << "parallel " << num_procs << " " << myid << "\n";
|
||||
sol_sock.precision(8);
|
||||
sol_sock << "solution\n" << pmesh << x << flush;
|
||||
}
|
||||
|
||||
return 0;
|
||||
}
|
||||
|
||||
real_t CheckH1Continuity(ParGridFunction &x)
|
||||
{
|
||||
const ParFiniteElementSpace *pfes = x.ParFESpace();
|
||||
ParMesh *pmesh = pfes->GetParMesh();
|
||||
const int dim = pmesh->Dimension();
|
||||
|
||||
real_t errorMax = 0.0;
|
||||
|
||||
// Shared-face values require face-neighbor data.
|
||||
x.ExchangeFaceNbrData();
|
||||
|
||||
// First handle faces for which both elements are local to this rank.
|
||||
for (int f = 0; f < pmesh->GetNumFaces(); f++)
|
||||
{
|
||||
const auto info = pmesh->GetFaceInformation(f);
|
||||
if (!info.IsLocal())
|
||||
{
|
||||
continue;
|
||||
}
|
||||
|
||||
FaceElementTransformations *FT = pmesh->GetFaceElementTransformations(f);
|
||||
const int faceOrder = dim == 3 ? pfes->GetFaceOrder(f) :
|
||||
pfes->GetEdgeOrder(f);
|
||||
const IntegrationRule &ir = IntRules.Get(FT->FaceGeom, 2 * faceOrder);
|
||||
|
||||
for (int i = 0; i < ir.GetNPoints(); i++)
|
||||
{
|
||||
const IntegrationPoint &fip = ir.IntPoint(i);
|
||||
IntegrationPoint ip1, ip2;
|
||||
|
||||
FT->Loc1.Transform(fip, ip1);
|
||||
FT->Loc2.Transform(fip, ip2);
|
||||
|
||||
const real_t v1 = x.GetValue(*FT->Elem1, ip1);
|
||||
const real_t v2 = x.GetValue(*FT->Elem2, ip2);
|
||||
errorMax = std::max(errorMax, std::abs(v1 - v2));
|
||||
}
|
||||
}
|
||||
|
||||
// Then check partition interfaces. Conforming shared faces are handled on
|
||||
// the lower-rank side, while shared slave nonconforming faces are handled
|
||||
// only on the slave side and therefore do not need additional filtering.
|
||||
for (int sf = 0; sf < pmesh->GetNSharedFaces(); sf++)
|
||||
{
|
||||
const int f = pmesh->GetSharedFace(sf);
|
||||
const auto info = pmesh->GetFaceInformation(f);
|
||||
if (!info.IsShared())
|
||||
{
|
||||
continue;
|
||||
}
|
||||
|
||||
FaceElementTransformations *FT = pmesh->GetSharedFaceTransformations(sf);
|
||||
const int faceOrder = dim == 3 ? pfes->GetFaceOrder(f) :
|
||||
pfes->GetEdgeOrder(f);
|
||||
const IntegrationRule &ir = IntRules.Get(FT->FaceGeom, 2 * faceOrder);
|
||||
|
||||
for (int i = 0; i < ir.GetNPoints(); i++)
|
||||
{
|
||||
const IntegrationPoint &fip = ir.IntPoint(i);
|
||||
IntegrationPoint ip1, ip2;
|
||||
|
||||
FT->Loc1.Transform(fip, ip1);
|
||||
FT->Loc2.Transform(fip, ip2);
|
||||
|
||||
const real_t v1 = x.GetValue(*FT->Elem1, ip1);
|
||||
const real_t v2 = x.GetValue(*FT->Elem2, ip2);
|
||||
errorMax = std::max(errorMax, std::abs(v1 - v2));
|
||||
}
|
||||
}
|
||||
|
||||
MPI_Allreduce(MPI_IN_PLACE, &errorMax, 1, MFEM_MPI_REAL_T, MPI_MAX,
|
||||
pmesh->GetComm());
|
||||
|
||||
return errorMax;
|
||||
}
|
||||
@@ -71,22 +71,14 @@ void Refine31(Mesh & mesh, int elem, char type)
|
||||
mesh.GeneralRefinement(refs);
|
||||
}
|
||||
|
||||
// Deterministic, somewhat random integer generator
|
||||
int MyRand(int & s)
|
||||
{
|
||||
s++;
|
||||
const double a = 1000 * sin(s * 1.1234 * M_PI);
|
||||
return int(std::abs(a));
|
||||
}
|
||||
|
||||
// Randomly select elements for 3:1 refinements in random directions.
|
||||
void TestAnisoRefRandom(int iter, int dim, Mesh & mesh)
|
||||
void TestAnisoRefRandom(int num_refs, int dim, Mesh & mesh)
|
||||
{
|
||||
int seed = 0;
|
||||
for (int i = 0; i < iter; i++)
|
||||
std::mt19937 gen(1);
|
||||
for (int i = 0; i < num_refs; i++)
|
||||
{
|
||||
const int elem = MyRand(seed) % mesh.GetNE();
|
||||
const int t = MyRand(seed) % dim;
|
||||
const auto elem = gen() % mesh.GetNE();
|
||||
const auto t = gen() % dim;
|
||||
auto type = t == 0 ? Refinement::X :
|
||||
(t == 1 ? Refinement::Y : Refinement::Z);
|
||||
Refine31(mesh, elem, type);
|
||||
|
||||
@@ -1,52 +0,0 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
# This file is part of the MFEM library. For more information and source code
|
||||
# availability visit https://mfem.org.
|
||||
#
|
||||
# MFEM is free software; you can redistribute it and/or modify it under the
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
set(MESH_FILES
|
||||
backward-facing-step.msh
|
||||
channel-cylinder.msh
|
||||
)
|
||||
|
||||
# Add a target to copy the mesh files from the source directory; used by sample
|
||||
# runs.
|
||||
set(SRC_MESH_FILES)
|
||||
foreach(MESH_FILE ${MESH_FILES})
|
||||
list(APPEND SRC_MESH_FILES ${CMAKE_CURRENT_SOURCE_DIR}/${MESH_FILE})
|
||||
endforeach()
|
||||
add_custom_command(OUTPUT data_is_copied
|
||||
COMMAND ${CMAKE_COMMAND} -E copy_if_different ${SRC_MESH_FILES} .
|
||||
COMMAND ${CMAKE_COMMAND} -E touch data_is_copied
|
||||
COMMENT "Copying multiapp miniapps data files ...")
|
||||
add_custom_target(copy_miniapps_multiapp_data DEPENDS data_is_copied)
|
||||
|
||||
|
||||
list(APPEND MULTIAPP_COMMON_SOURCES
|
||||
multiapp.cpp)
|
||||
|
||||
list(APPEND MULTIAPP_COMMON_HEADERS
|
||||
multiapp.hpp)
|
||||
|
||||
set(MULTIAPP_COMMON_FILES
|
||||
EXTRA_SOURCES ${MULTIAPP_COMMON_SOURCES}
|
||||
EXTRA_HEADERS ${MULTIAPP_COMMON_HEADERS})
|
||||
|
||||
|
||||
# Parallel apps.
|
||||
if (MFEM_USE_MPI)
|
||||
add_mfem_miniapp(coupled-diffusion
|
||||
MAIN coupled-diffusion.cpp
|
||||
${MFEM_MINIAPPS_COMMON_HEADERS} ${MULTIAPP_COMMON_FILES}
|
||||
LIBRARIES mfem-common)
|
||||
add_dependencies(coupled-diffusion copy_miniapps_multiapp_data)
|
||||
|
||||
# Add parallel tests.
|
||||
# if (MFEM_ENABLE_TESTING)
|
||||
# endif()
|
||||
endif()
|
||||
@@ -1,895 +0,0 @@
|
||||
#include "mfem.hpp"
|
||||
#include "multiapp.hpp"
|
||||
#include <fstream>
|
||||
using namespace mfem;
|
||||
using namespace std;
|
||||
|
||||
struct CaseContext
|
||||
{
|
||||
int ser_ref = 1; // Serial mesh refinement
|
||||
int order = 3; // Finite element order
|
||||
bool visualization = true;// Visualization on/off
|
||||
int grad_mode = 1; // Gradient mode for the coupled operator - 0: finite difference,
|
||||
// 1: back/forward propagation
|
||||
bool coupled = true; // Coupled (true) vs. uncoupled (false) solves
|
||||
int nl_iter = 50; // Maximum number of nonlinear iterations
|
||||
int lin_iter = 2000; // Maximum number of linear iterations
|
||||
|
||||
#if defined(MFEM_USE_DOUBLE)
|
||||
real_t tol_nsolve = 1e-4;
|
||||
real_t tol_lsolve = 1e-6;
|
||||
#elif defined(MFEM_USE_SINGLE)
|
||||
real_t tol_nsolve = 1e-3;
|
||||
real_t tol_lsolve = 1e-3;
|
||||
#else
|
||||
#error "Only single and double precision are supported!"
|
||||
real_t tol_nsolve = 0;
|
||||
real_t tol_lsolve = 0;
|
||||
#endif
|
||||
} ctx;
|
||||
|
||||
void SetSolverParameters(IterativeSolver *solver, real_t rtol, real_t atol , int max_it,
|
||||
int print_level, bool iterative_mode);
|
||||
|
||||
|
||||
/// A functional diffusion coefficient (i.e., k(T))
|
||||
class FunctionalCoefficient : public Coefficient
|
||||
{
|
||||
public:
|
||||
enum Mode { FUNC = 0, GRAD = 1};
|
||||
|
||||
protected:
|
||||
ParGridFunction *T_gf = nullptr;
|
||||
real_t kref = 1.0;
|
||||
real_t a0 = 0.0, a1 = 0.0, a2 = 0.0;
|
||||
int findex = 0;
|
||||
Mode mode = Mode::FUNC; // otherwise, grad
|
||||
|
||||
public:
|
||||
FunctionalCoefficient(ParGridFunction *T_gf, real_t kref):
|
||||
T_gf(T_gf), kref(kref) { }
|
||||
|
||||
FunctionalCoefficient(ParGridFunction *T_gf, real_t kref, real_t a0):
|
||||
T_gf(T_gf), kref(kref), a0(a0) { findex = 1; }
|
||||
|
||||
FunctionalCoefficient(ParGridFunction *T_gf, real_t kref,
|
||||
real_t a0, real_t a1, real_t a2): T_gf(T_gf),
|
||||
kref(kref), a0(a0), a1(a1), a2(a2) { findex = 2; }
|
||||
|
||||
real_t Exponential(real_t x, bool eval_f) const
|
||||
{
|
||||
real_t f = kref*exp(a0*x);
|
||||
return (eval_f ? f : a0*f);
|
||||
}
|
||||
real_t Polynomial(real_t x, bool eval_f) const
|
||||
{
|
||||
return (eval_f ? kref*(a0 + a1*x + a2*x*x) : kref*(a1 + 2*a2*x));
|
||||
}
|
||||
|
||||
void SetMode(Mode mode) { this->mode = mode; }
|
||||
Mode GetMode() const { return mode; }
|
||||
|
||||
void UpdateGridFunction(ParGridFunction *gf) { T_gf = gf; }
|
||||
|
||||
real_t Eval(real_t x, bool eval_f) const
|
||||
{
|
||||
switch (findex)
|
||||
{
|
||||
case 1:
|
||||
return Exponential(x, eval_f);
|
||||
case 2:
|
||||
return Polynomial(x, eval_f);
|
||||
default:
|
||||
return kref;
|
||||
}
|
||||
}
|
||||
|
||||
real_t Eval(ElementTransformation &Tr,
|
||||
const IntegrationPoint &ip) override
|
||||
{
|
||||
real_t T = T_gf ? T_gf->GetValue(Tr, ip) : 0.0;
|
||||
bool eval_f = (mode == Mode::FUNC);
|
||||
return Eval(T, eval_f);
|
||||
}
|
||||
};
|
||||
|
||||
|
||||
/// A coefficient defined by the product of grid functions, e.g. k(T) = prod_i x_i
|
||||
class GridFunctionProductCoefficient : public Coefficient
|
||||
{
|
||||
protected:
|
||||
std::vector<ParGridFunction*> &x;
|
||||
|
||||
public:
|
||||
GridFunctionProductCoefficient(std::vector<ParGridFunction*> &x) : x(x) { }
|
||||
|
||||
real_t Eval(ElementTransformation &Tr, const IntegrationPoint &ip) override
|
||||
{
|
||||
real_t prod = 1.0;
|
||||
for(size_t i = 0; i < x.size(); i++)
|
||||
{
|
||||
real_t val = x[i]->GetValue(Tr, ip);
|
||||
prod *= val;
|
||||
}
|
||||
return prod;
|
||||
}
|
||||
};
|
||||
|
||||
class CoefficientIntegrator : public NonlinearFormIntegrator
|
||||
{
|
||||
protected:
|
||||
FunctionalCoefficient *func = nullptr;
|
||||
Vector shape;
|
||||
|
||||
public:
|
||||
CoefficientIntegrator(FunctionalCoefficient *func) : func(func) { }
|
||||
|
||||
|
||||
void SetCoefficient(FunctionalCoefficient *f) { func = f; }
|
||||
|
||||
void AssembleElementVector(const FiniteElement &el,
|
||||
ElementTransformation &Tr,
|
||||
const Vector &elfun, Vector &elvect)
|
||||
{
|
||||
int dof = el.GetDof();
|
||||
shape.SetSize(dof);
|
||||
elvect.SetSize(dof);
|
||||
elvect = 0.0;
|
||||
|
||||
const IntegrationRule *ir = &el.GetNodes();
|
||||
|
||||
for (int i = 0; i < ir->GetNPoints(); i++)
|
||||
{
|
||||
const IntegrationPoint &ip = ir->IntPoint(i);
|
||||
el.CalcShape(ip, shape);
|
||||
Tr.SetIntPoint(&ip);
|
||||
real_t x = elfun * shape; // Evaluate the function at the integration point
|
||||
real_t fval = func->Eval(x, true);
|
||||
for (int j = 0; j < dof; j++)
|
||||
{
|
||||
elvect(j) += fval * shape(j);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
void AssembleElementGrad(const FiniteElement &el, ElementTransformation &Tr,
|
||||
const Vector &elfun, DenseMatrix &elmat)
|
||||
{
|
||||
int dof = el.GetDof();
|
||||
shape.SetSize(dof);
|
||||
elmat.SetSize(dof);
|
||||
elmat = 0.0;
|
||||
|
||||
const IntegrationRule *ir = &el.GetNodes();
|
||||
|
||||
for (int i = 0; i < ir->GetNPoints(); i++)
|
||||
{
|
||||
const IntegrationPoint &ip = ir->IntPoint(i);
|
||||
el.CalcShape(ip, shape);
|
||||
Tr.SetIntPoint(&ip);
|
||||
real_t x = elfun * shape; // Evaluate the function at the integration point
|
||||
real_t dfdx = func->Eval(x, false); // Evaluate the derivative of the function at the integration point
|
||||
for (int j = 0; j < dof; j++)
|
||||
{
|
||||
elmat(j,j) += dfdx * shape(j); // Diagonal contribution to the Jacobian
|
||||
}
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
|
||||
class NonlinearDiffusionIntegrator : public NonlinearFormIntegrator
|
||||
{
|
||||
protected:
|
||||
Coefficient *k;
|
||||
Coefficient *dk;
|
||||
|
||||
Vector u, vec, shape;
|
||||
DenseMatrix dshape, dshapedxt, adjJ;
|
||||
public:
|
||||
NonlinearDiffusionIntegrator(Coefficient *kappa, Coefficient *dkappa) :
|
||||
k(kappa), dk(dkappa) { }
|
||||
|
||||
virtual void AssembleElementVector(const FiniteElement &el,
|
||||
ElementTransformation &Tr,
|
||||
const Vector &elfun, Vector &elvec)
|
||||
{
|
||||
int dim = el.GetDim();
|
||||
int dof = el.GetDof();
|
||||
real_t w;
|
||||
|
||||
elvec.SetSize(dof);
|
||||
elvec = 0.0;
|
||||
|
||||
const IntegrationRule *ir = IntRule ? IntRule : &IntRules.Get(el.GetGeomType(), 2*el.GetOrder());
|
||||
u.SetSize(dim);
|
||||
vec.SetSize(dim);
|
||||
dshape.SetSize(dof, dim);
|
||||
adjJ.SetSize(dim, dim);
|
||||
|
||||
for (int i = 0; i < ir->GetNPoints(); i++)
|
||||
{
|
||||
const IntegrationPoint &ip = ir->IntPoint(i);
|
||||
el.CalcDShape(ip, dshape);
|
||||
|
||||
Tr.SetIntPoint(&ip);
|
||||
CalcAdjugate(Tr.Jacobian(), adjJ);
|
||||
w = ip.weight / Tr.Weight();
|
||||
|
||||
dshape.MultTranspose(elfun, u);
|
||||
adjJ.MultTranspose(u, vec);
|
||||
if(k)
|
||||
{
|
||||
w *= k->Eval(Tr, ip);
|
||||
}
|
||||
|
||||
vec *= w;
|
||||
adjJ.Mult(vec, u);
|
||||
dshape.AddMult(u, elvec);
|
||||
}
|
||||
}
|
||||
|
||||
void AssembleElementGrad(const FiniteElement &el, ElementTransformation &Tr,
|
||||
const Vector &elfun, DenseMatrix &elmat)
|
||||
{
|
||||
int dim = el.GetDim();
|
||||
int dof = el.GetDof();
|
||||
real_t w, k0 = 0.0, dk0 = 0.0;
|
||||
|
||||
elmat.SetSize(dof);
|
||||
elmat = 0.0;
|
||||
|
||||
const IntegrationRule *ir = IntRule ? IntRule : &IntRules.Get(el.GetGeomType(), 2*el.GetOrder());
|
||||
u.SetSize(dim);
|
||||
shape.SetSize(dof);
|
||||
vec.SetSize(dof);
|
||||
dshape.SetSize(dof, dim);
|
||||
dshapedxt.SetSize(dof, dim);
|
||||
|
||||
// f = grad(psi) * k(u) * grad(T)
|
||||
// df/dT = grad(psi) ( k(u0) * grad(T) + k'(u0) * grad(u0) * T )
|
||||
for (int i = 0; i < ir->GetNPoints(); i++)
|
||||
{
|
||||
const IntegrationPoint &ip = ir->IntPoint(i);
|
||||
el.CalcShape(ip, shape);
|
||||
el.CalcDShape(ip, dshape);
|
||||
|
||||
Tr.SetIntPoint(&ip);
|
||||
w = ip.weight / Tr.Weight();
|
||||
|
||||
Mult(dshape, Tr.AdjugateJacobian(), dshapedxt);
|
||||
|
||||
k0 = k ? k->Eval(Tr, ip) : 0.0;
|
||||
dk0 = dk ? dk->Eval(Tr, ip) : 0.0;
|
||||
|
||||
if(k0 != 0.0) // grad(psi) * k(u0) * grad(T)
|
||||
{
|
||||
real_t kdT = w*k0;
|
||||
AddMult_a_AAt(kdT, dshapedxt, elmat);
|
||||
}
|
||||
|
||||
if(dk0 != 0.0) // grad(psi) * (k'(T0) * grad(T0)) * T
|
||||
{
|
||||
dk0 = w*dk->Eval(Tr, ip);
|
||||
dshapedxt.MultTranspose(elfun, u); // grad(T0) in physical space
|
||||
u *= dk0; // k'(T0) * grad(T0)
|
||||
dshapedxt.Mult(u, vec); // grad(psi) * k'(T0) * grad(T0)
|
||||
AddMultVWt(vec, shape, elmat); // grad(psi) * k'(T0) * grad(T0) * T
|
||||
}
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
/// An application that takes an input field T, and computes an output field k(T)
|
||||
// represented by the FunctionalCoefficient class.
|
||||
class DiffusionCoefficient : public GraphNode
|
||||
{
|
||||
public:
|
||||
using Mode = FunctionalCoefficient::Mode;
|
||||
|
||||
protected:
|
||||
ParFiniteElementSpace &fes;
|
||||
mutable ParGridFunction T, k;
|
||||
mutable FunctionalCoefficient *kc;
|
||||
// mutable Vector tdof, kdof, dk_dof, dT_dof;
|
||||
mutable Mode mode = Mode::FUNC;
|
||||
|
||||
mutable ParNonlinearForm Nform;
|
||||
mutable Operator *J = nullptr; // Jacobian for the nonlinear form
|
||||
|
||||
CoefficientIntegrator *coeff_integrator = nullptr;
|
||||
|
||||
public:
|
||||
DiffusionCoefficient(ParFiniteElementSpace &fes) :
|
||||
GraphNode(fes.GetTrueVSize()), fes(fes), T(&fes), k(&fes),
|
||||
kc(new FunctionalCoefficient(&T, 1.0, 5.0e-2)),
|
||||
Nform(&fes),
|
||||
coeff_integrator(new CoefficientIntegrator(kc))
|
||||
{
|
||||
k = 0.0;
|
||||
T = 0.0;
|
||||
k.ProjectCoefficient(*kc);
|
||||
|
||||
// Testing with the nonlinear form framework to compute k(T) and dk/dT
|
||||
Nform.AddDomainIntegrator(coeff_integrator); // Transfer ownership
|
||||
Nform.SetGradientType(Operator::Type::Hypre_ParCSR);
|
||||
Nform.Setup();
|
||||
|
||||
SetInputOffsets(Array<int>({0, fes.GetTrueVSize()}));
|
||||
SetOutputOffsets(Array<int>({0, fes.GetTrueVSize()}));
|
||||
}
|
||||
|
||||
void SetMode(Mode mode) { this->mode = mode; }
|
||||
|
||||
FunctionalCoefficient* GetCoefficient() { return kc; }
|
||||
|
||||
void SetCoefficient(FunctionalCoefficient *fc)
|
||||
{
|
||||
if(kc) delete kc;
|
||||
kc = fc;
|
||||
kc->SetMode(mode);
|
||||
kc->UpdateGridFunction(&T);
|
||||
coeff_integrator->SetCoefficient(kc);
|
||||
}
|
||||
|
||||
void Mult(const Vector &x, Vector &y) const override
|
||||
{
|
||||
BlockVector xb(x.GetData(), InputOffsets());
|
||||
BlockVector yb(y.GetData(), OutputOffsets());
|
||||
|
||||
MultiVector xmv(1), ymv(1);
|
||||
xmv.MakeRef(0, xb.GetBlock(0));
|
||||
ymv.MakeRef(0, yb.GetBlock(0));
|
||||
|
||||
const_cast<DiffusionCoefficient*>(this)->Mult(xmv, ymv);
|
||||
}
|
||||
|
||||
void Mult(const MultiVector &x, MultiVector &y) override
|
||||
{
|
||||
const Vector &tdof = x[0];
|
||||
Vector &kdof = y[0];
|
||||
|
||||
Nform.Mult(tdof, kdof);
|
||||
if(exec_mode == GraphNode::GRADIENT_MODE)
|
||||
{
|
||||
J = &Nform.GetGradient(tdof); // Store jacobian for JVP
|
||||
}
|
||||
else
|
||||
{
|
||||
J = nullptr; // Clear the Jacobian if not in gradient mode
|
||||
}
|
||||
}
|
||||
|
||||
// TODO: Possibly delete and only support MultiVector version of GradientMult
|
||||
void GradientMult(const Vector &x, const Vector &dx, Vector &dy) const override
|
||||
{
|
||||
BlockVector xb(x.GetData(), InputOffsets());
|
||||
BlockVector dxb(dx.GetData(), InputOffsets());
|
||||
BlockVector dyb(dy.GetData(), OutputOffsets());
|
||||
|
||||
MultiVector xmv(1), dxmv(1), dymv(1);
|
||||
xmv.MakeRef(0, xb.GetBlock(0));
|
||||
dxmv.MakeRef(0, dxb.GetBlock(0));
|
||||
dymv.MakeRef(0, dyb.GetBlock(0));
|
||||
const_cast<DiffusionCoefficient*>(this)->GradientMult(xmv, dxmv, dymv);
|
||||
}
|
||||
|
||||
void GradientMult(const MultiVector &x, const MultiVector &dx, MultiVector &dy) const override
|
||||
{
|
||||
const Vector &tdof = x[0];
|
||||
const Vector &xadj = dx[0];
|
||||
Vector &yadj = dy[0];
|
||||
|
||||
if(J)
|
||||
{
|
||||
J->Mult(xadj, yadj);
|
||||
}
|
||||
else
|
||||
{
|
||||
J = &Nform.GetGradient(tdof); // Store jacobian for JVP
|
||||
J->Mult(xadj, yadj);
|
||||
}
|
||||
}
|
||||
|
||||
~DiffusionCoefficient() override
|
||||
{
|
||||
if(kc) delete kc;
|
||||
}
|
||||
};
|
||||
|
||||
/// An application that takes n input fields x_i, and computes an output
|
||||
/// field prod(x) := y = prod_i x_i.
|
||||
/// Also provides the derivative dy/dx_i = prod_{j!=i} x_j * dx_i/dx for i = 0,...,n-1.
|
||||
class ProductGridFunctions : public GraphNode
|
||||
{
|
||||
protected:
|
||||
|
||||
ParFiniteElementSpace &fes;
|
||||
mutable std::vector<ParGridFunction*> x_gf;
|
||||
mutable Vector dfdx;
|
||||
mutable ParGridFunction y_gf;
|
||||
mutable GridFunctionProductCoefficient prod_coeff;
|
||||
|
||||
public:
|
||||
ProductGridFunctions(ParFiniteElementSpace &fes, int n) :
|
||||
// GraphNode(fes.GetTrueVSize()),
|
||||
GraphNode(fes.GetTrueVSize(), fes.GetTrueVSize() * n),
|
||||
fes(fes), x_gf(n),
|
||||
y_gf(&fes), prod_coeff(x_gf)
|
||||
{
|
||||
Array<int> offsets(n+1);
|
||||
offsets[0] = 0;
|
||||
for (int i = 0; i < n; i++)
|
||||
{
|
||||
x_gf[i] = new ParGridFunction(&fes);
|
||||
*x_gf[i] = 0.0;
|
||||
offsets[i+1] = offsets[i] + fes.GetTrueVSize();
|
||||
}
|
||||
y_gf = 0.0;
|
||||
y_gf.ProjectCoefficient(prod_coeff);
|
||||
|
||||
SetInputOffsets(offsets);
|
||||
SetOutputOffsets(Array<int>({0, fes.GetTrueVSize()}));
|
||||
}
|
||||
|
||||
void Mult(const Vector &x, Vector &y) const override
|
||||
{
|
||||
BlockVector xb(x.GetData(), InputOffsets());
|
||||
BlockVector yb(y.GetData(), OutputOffsets());
|
||||
|
||||
MultiVector xmv(x_gf.size()), ymv(1);
|
||||
for (size_t i = 0; i < x_gf.size(); i++)
|
||||
{
|
||||
xmv.MakeRef(i, xb.GetBlock(i));
|
||||
}
|
||||
ymv.MakeRef(0, yb.GetBlock(0));
|
||||
const_cast<ProductGridFunctions*>(this)->Mult(xmv, ymv);
|
||||
}
|
||||
|
||||
void Mult(const MultiVector &x, MultiVector &y) override
|
||||
{
|
||||
for (size_t i = 0; i < x_gf.size(); i++)
|
||||
{
|
||||
const Vector &x_dof = x[i];
|
||||
x_gf[i]->SetFromTrueDofs(x_dof);
|
||||
}
|
||||
|
||||
Field *out_field = OutputField(0);
|
||||
Vector &y_dof = y[0];
|
||||
y_gf.ProjectCoefficient(prod_coeff);
|
||||
y_gf.GetTrueDofs(y_dof);
|
||||
}
|
||||
|
||||
// TODO: Possibly delete and only support MultiVector version of GradientMult
|
||||
void GradientMult(const Vector &x, const Vector &dx, Vector &dy) const override
|
||||
{
|
||||
BlockVector xb(x.GetData(), InputOffsets());
|
||||
BlockVector dxb(dx.GetData(), InputOffsets());
|
||||
BlockVector dyb(dy.GetData(), OutputOffsets());
|
||||
|
||||
MultiVector xmv(x_gf.size()), dxmv(x_gf.size()), dymv(1);
|
||||
for (size_t i = 0; i < x_gf.size(); i++)
|
||||
{
|
||||
xmv.MakeRef(i, xb.GetBlock(i));
|
||||
dxmv.MakeRef(i, dxb.GetBlock(i));
|
||||
}
|
||||
dymv.MakeRef(0, dyb.GetBlock(0));
|
||||
const_cast<ProductGridFunctions*>(this)->GradientMult(xmv, dxmv, dymv);
|
||||
}
|
||||
|
||||
void GradientMult(const MultiVector &x, const MultiVector &dx, MultiVector &dy) const override
|
||||
{
|
||||
// Jacobian vector product for y = prod_i x_i is:
|
||||
// dy/dx = sum_i (prod_{j!=i} x_j * dx_i/dx)
|
||||
for (size_t i = 0; i < x_gf.size(); i++)
|
||||
{
|
||||
const Vector &x_dof = x[i];
|
||||
x_gf[i]->SetFromTrueDofs(x_dof); // Set all x_i
|
||||
}
|
||||
|
||||
Vector &jvp = dy[0];
|
||||
jvp = 0.0;
|
||||
for (size_t i = 0; i < x_gf.size(); i++)
|
||||
{
|
||||
const Vector &x_dof = x[i];
|
||||
const Vector &dx_dof = dx[i]; // Get dx_i/dx
|
||||
|
||||
x_gf[i]->SetFromTrueDofs(dx_dof); // Set x_i = dx_i/dx for i-th term in the product
|
||||
y_gf.ProjectCoefficient(prod_coeff); // Recompute product with x_i replaced by dx_i/dx
|
||||
y_gf.GetTrueDofs(dfdx); // Get prod_{j!=i} x_j * dx_i/dx for i-th term
|
||||
jvp += dfdx; // Accumulate contribution from i-th term
|
||||
x_gf[i]->SetFromTrueDofs(x_dof); // reset to original value for next iteration
|
||||
}
|
||||
}
|
||||
|
||||
~ProductGridFunctions() override
|
||||
{
|
||||
for (size_t i = 0; i < x_gf.size(); i++)
|
||||
{
|
||||
if(x_gf[i]) delete x_gf[i];
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
|
||||
/// An application that represents the nonlinear diffusion operator: f(T) = -Div(k(u) grad(T))
|
||||
/// with input field T and k, and output field f(T).
|
||||
class DiffusionOperator : public GraphNode
|
||||
{
|
||||
public:
|
||||
|
||||
// Mesh and finite element space
|
||||
ParMesh &mesh;
|
||||
ParFiniteElementSpace &fes;
|
||||
|
||||
/// Essential dof array.
|
||||
Array<int> ess_tdofs;
|
||||
|
||||
/// Grid functions for the temperature and heat flux
|
||||
mutable ParGridFunction T, k, dk;
|
||||
mutable GridFunctionCoefficient k_gfc, dk_gfc;
|
||||
mutable ParNonlinearForm Nform;
|
||||
mutable ParLinearForm bform;
|
||||
mutable Vector b;
|
||||
|
||||
ConstantCoefficient zero_coeff, one_coeff;
|
||||
|
||||
mutable FunctionalCoefficient *kc = nullptr;
|
||||
mutable HypreParMatrix *dfdk_mat = nullptr, *dfdT_mat = nullptr;
|
||||
|
||||
public:
|
||||
|
||||
DiffusionOperator(ParFiniteElementSpace &fes_) :
|
||||
// GraphNode(fes_.GetTrueVSize()),
|
||||
GraphNode(fes_.GetTrueVSize(),2*fes_.GetTrueVSize()),
|
||||
mesh(*fes_.GetParMesh()), fes(fes_),
|
||||
T(&fes), k(&fes), dk(&fes),
|
||||
k_gfc(&k), dk_gfc(&dk),
|
||||
Nform(&fes), bform(&fes),
|
||||
zero_coeff(0.0), one_coeff(1.0)
|
||||
{
|
||||
fes.GetBoundaryTrueDofs(ess_tdofs);
|
||||
T = 0.0;
|
||||
k = 0.0;
|
||||
dk = 0.0;
|
||||
|
||||
bform.AddDomainIntegrator(new DomainLFIntegrator(one_coeff));
|
||||
Nform.AddDomainIntegrator(new NonlinearDiffusionIntegrator(&k_gfc, &dk_gfc));
|
||||
Nform.SetGradientType(Operator::Type::Hypre_ParCSR);
|
||||
|
||||
b.SetSize(fes.GetTrueVSize()); b = 0.0;
|
||||
Assemble();
|
||||
|
||||
SetInputOffsets(Array<int>({0, fes.GetTrueVSize(), 2*fes.GetTrueVSize()}));
|
||||
SetOutputOffsets(Array<int>({0, fes.GetTrueVSize()}));
|
||||
}
|
||||
|
||||
void SetCoefficient(FunctionalCoefficient *fc) { kc = fc; }
|
||||
|
||||
void Assemble()
|
||||
{
|
||||
AssembleLinearForms();
|
||||
AssembleBilinearForms();
|
||||
AssembleNonlinearForms();
|
||||
}
|
||||
|
||||
void AssembleBilinearForms()
|
||||
{}
|
||||
|
||||
void AssembleNonlinearForms()
|
||||
{
|
||||
Nform.SetEssentialTrueDofs(ess_tdofs);
|
||||
Nform.Setup();
|
||||
}
|
||||
|
||||
void AssembleLinearForms()
|
||||
{
|
||||
bform.Assemble();
|
||||
bform.ParallelAssemble(b);
|
||||
}
|
||||
|
||||
void Mult(const Vector &x, Vector &y) const override
|
||||
{
|
||||
BlockVector xb(x.GetData(), InputOffsets());
|
||||
BlockVector yb(y.GetData(), OutputOffsets());
|
||||
|
||||
MultiVector xmv(2), ymv(1);
|
||||
xmv.MakeRef(0, xb.GetBlock(0));
|
||||
xmv.MakeRef(1, xb.GetBlock(1));
|
||||
ymv.MakeRef(0, yb.GetBlock(0));
|
||||
|
||||
const_cast<DiffusionOperator*>(this)->Mult(xmv, ymv);
|
||||
}
|
||||
|
||||
void Mult(const MultiVector &x, MultiVector &y) override
|
||||
{
|
||||
const Vector &tdofs = x[0];
|
||||
const Vector &kdofs = x[1];
|
||||
Vector &fdofs = y[0];
|
||||
|
||||
k.SetFromTrueDofs(kdofs); // update for use in k_gfc
|
||||
|
||||
if(exec_mode == GraphNode::GRADIENT_MODE)
|
||||
{
|
||||
if(dfdT_mat) delete dfdT_mat;
|
||||
if(dfdk_mat) delete dfdk_mat;
|
||||
|
||||
dk = 0.0;
|
||||
k.SetFromTrueDofs(kdofs);
|
||||
Operator* grad = &Nform.GetGradient(tdofs);
|
||||
dfdT_mat = new HypreParMatrix(dynamic_cast<const HypreParMatrix&>(*grad)); // deep copy
|
||||
|
||||
dk = 1.0;
|
||||
k = 0.0;
|
||||
grad = &Nform.GetGradient(tdofs);
|
||||
dfdk_mat = new HypreParMatrix(dynamic_cast<const HypreParMatrix&>(*grad)); // deep copy
|
||||
}
|
||||
else
|
||||
{
|
||||
if(dfdT_mat) { delete dfdT_mat; dfdT_mat = nullptr; }
|
||||
if(dfdk_mat) { delete dfdk_mat; dfdk_mat = nullptr; }
|
||||
}
|
||||
|
||||
Nform.Mult(tdofs, fdofs);
|
||||
fdofs.SetSubVector(ess_tdofs, 0.0);
|
||||
}
|
||||
|
||||
// Exact block jacobian [df/dT, df/dk]
|
||||
Operator& GetGradient(const Vector &x) const override
|
||||
{
|
||||
MFEM_ABORT("GetGradient not implemented for DiffusionOperator");
|
||||
}
|
||||
|
||||
// TODO: Possibly delete and only support MultiVector version of GradientMult
|
||||
void GradientMult(const Vector &x, const Vector &dx, Vector &dy) const override
|
||||
{
|
||||
BlockVector xb(x.GetData(), InputOffsets());
|
||||
BlockVector dxb(dx.GetData(), InputOffsets());
|
||||
BlockVector dyb(dy.GetData(), OutputOffsets());
|
||||
|
||||
Vector &Tadj = dxb.GetBlock(0);
|
||||
Vector &kadj = dxb.GetBlock(1);
|
||||
Vector &yadj = dyb.GetBlock(0);
|
||||
|
||||
Vector &tdofs = xb.GetBlock(0);
|
||||
Vector &kdofs = xb.GetBlock(1);
|
||||
|
||||
dfdT_mat->Mult(Tadj, yadj);
|
||||
dfdk_mat->AddMult(kadj, yadj);
|
||||
}
|
||||
|
||||
void GradientMult(const MultiVector &x, const MultiVector &dx, MultiVector &dy) const override
|
||||
{
|
||||
const Vector &Tadj = dx[0];
|
||||
const Vector &kadj = dx[1];
|
||||
Vector &yadj = dy[0];
|
||||
|
||||
const Vector &tdofs = x[0];
|
||||
const Vector &kdofs = x[1];
|
||||
|
||||
dfdT_mat->Mult(Tadj, yadj);
|
||||
dfdk_mat->AddMult(kadj, yadj);
|
||||
}
|
||||
|
||||
/// @brief Destroy the DiffusionOperator object
|
||||
~DiffusionOperator() override
|
||||
{
|
||||
if(dfdT_mat) delete dfdT_mat;
|
||||
if(dfdk_mat) delete dfdk_mat;
|
||||
}
|
||||
};
|
||||
|
||||
|
||||
int main(int argc, char *argv[])
|
||||
{
|
||||
Mpi::Init();
|
||||
Hypre::Init();
|
||||
|
||||
using GradMode = DAGraph::GradMode;
|
||||
|
||||
OptionsParser args(argc, argv);
|
||||
args.AddOption(&ctx.order, "-o", "--order",
|
||||
"Finite element order (polynomial degree).");
|
||||
args.AddOption(&ctx.visualization, "-vis", "--visualization", "-no-vis",
|
||||
"--no-visualization",
|
||||
"Enable or disable GLVis visualization.");
|
||||
args.AddOption(&ctx.ser_ref, "-rs", "--serial-refine",
|
||||
"Number of times to refine the mesh in serial.");
|
||||
|
||||
args.AddOption(&ctx.grad_mode, "-gm", "--grad-mode",
|
||||
"Gradient mode for the coupled operator (0: exact, 1: finite difference, 2: algorithmic differentiation)");
|
||||
args.AddOption(&ctx.coupled, "-cp", "--coupled", "-ucp", "--uncoupled",
|
||||
"Coupled (true) vs. uncoupled (false) solves.");
|
||||
args.ParseCheck();
|
||||
|
||||
|
||||
int order = ctx.order;
|
||||
std::string mesh_file = "../../data/star.mesh";
|
||||
Mesh *serial_mesh = new Mesh(mesh_file);
|
||||
int dim = serial_mesh->Dimension();
|
||||
|
||||
for (int i = 0; i < ctx.ser_ref; ++i) { serial_mesh->UniformRefinement(); }
|
||||
serial_mesh->SetCurvature(order, false, dim, Ordering::byNODES);
|
||||
|
||||
ParMesh pmesh(MPI_COMM_WORLD, *serial_mesh);
|
||||
delete serial_mesh;
|
||||
pmesh.UniformRefinement();
|
||||
|
||||
// Finite element spaces
|
||||
H1_FECollection fec(order, dim);
|
||||
ParFiniteElementSpace fes(&pmesh, &fec);
|
||||
|
||||
// Build all operator nodes
|
||||
DiffusionCoefficient diff_coeff_1(fes);
|
||||
diff_coeff_1.SetName("k(T1)");
|
||||
diff_coeff_1.SetCoefficient(new FunctionalCoefficient(nullptr, 1.0, 3.5e-2));
|
||||
// diff_coeff_1.SetCoefficient(new FunctionalCoefficient(nullptr, 1.0, 1.0, 0.1, 0.0));
|
||||
|
||||
DiffusionCoefficient diff_coeff_2(fes);
|
||||
diff_coeff_2.SetName("k(T2)");
|
||||
diff_coeff_2.SetCoefficient(new FunctionalCoefficient(nullptr, 1.0, 1.0, 2.0, 0.0));
|
||||
// diff_coeff_2.SetCoefficient(new FunctionalCoefficient(nullptr, 1.5, 2.5e-2));
|
||||
|
||||
ProductGridFunctions prod_coeff(fes, 2);
|
||||
prod_coeff.SetName("k(T1,T2)");
|
||||
|
||||
DiffusionOperator diff_op1(fes);
|
||||
diff_op1.SetName("Div(k(T1,T2) grad(T1))");
|
||||
diff_op1.SetCoefficient(diff_coeff_1.GetCoefficient());
|
||||
|
||||
DiffusionOperator diff_op2(fes);
|
||||
diff_op2.SetName("Div(k(T1,T2) grad(T2))");
|
||||
diff_op2.SetCoefficient(diff_coeff_2.GetCoefficient());
|
||||
|
||||
|
||||
// Build the DAG in any order, and then sort it to ensure the correct execution order
|
||||
DAGraph dag(5);
|
||||
dag.AddOperator(&diff_coeff_1);
|
||||
dag.AddOperator(&diff_op1, fes.GetTrueVSize());
|
||||
dag.AddOperator(&diff_op2, fes.GetTrueVSize());
|
||||
dag.AddOperator(&diff_coeff_2);
|
||||
dag.AddOperator(&prod_coeff);
|
||||
|
||||
Vector k1vec(fes.GetTrueVSize()); k1vec = 0.0;
|
||||
Vector k2vec(fes.GetTrueVSize()); k2vec = 0.0;
|
||||
Vector kpvec(fes.GetTrueVSize()); kpvec = 0.0;
|
||||
|
||||
Vector k1adj(fes.GetTrueVSize()); k1adj = 0.0;
|
||||
Vector k2adj(fes.GetTrueVSize()); k2adj = 0.0;
|
||||
// Vector kpadj(fes.GetTrueVSize()); kpadj = 0.0;
|
||||
|
||||
// Input fields get data from 'x' in DAGraph::Mult(x, y)
|
||||
Field T1_field(nullptr, nullptr);
|
||||
Field T2_field(nullptr, nullptr);
|
||||
|
||||
// Write space for data and adjoint only needed
|
||||
// for the intermediate fields k1, k2, and k_prod
|
||||
Field k1_field(&k1vec, &k1adj);
|
||||
Field k2_field(&k2vec, &k2adj);
|
||||
Field kp_field(&kpvec, &kpvec); // can use same space for data & adjoint
|
||||
|
||||
// Output fields get data from 'y' in DAGraph::Mult(x, y)
|
||||
Field f1_field(nullptr, nullptr);
|
||||
Field f2_field(nullptr, nullptr);
|
||||
|
||||
|
||||
// Add input and output to the DAG
|
||||
int sz = fes.GetTrueVSize();
|
||||
dag.AddInput(&T1_field, sz);
|
||||
dag.AddInput(&T2_field, sz);
|
||||
dag.AddOutput(&f1_field, sz);
|
||||
dag.AddOutput(&f2_field, sz);
|
||||
|
||||
// Form connections between the nodes in the DAG
|
||||
diff_coeff_1.AddInput(&T1_field);
|
||||
diff_coeff_1.AddOutput(&k1_field);
|
||||
|
||||
diff_coeff_2.AddInput(&T2_field);
|
||||
diff_coeff_2.AddOutput(&k2_field);
|
||||
|
||||
prod_coeff.AddInputs(&k1_field, &k2_field);
|
||||
prod_coeff.AddOutput(&kp_field);
|
||||
|
||||
diff_op1.AddInput(&T1_field);
|
||||
diff_op1.AddOutput(&f1_field);
|
||||
|
||||
diff_op2.AddInput(&T2_field);
|
||||
diff_op2.AddOutput(&f2_field);
|
||||
|
||||
if(ctx.coupled)
|
||||
{
|
||||
diff_op1.AddInput(&kp_field); // kp_field
|
||||
diff_op2.AddInput(prod_coeff.OutputField(0)); // Can also use kp_field directly
|
||||
}
|
||||
else
|
||||
{
|
||||
diff_op1.AddInput(&k1_field); // Can also use diff_coeff_1.OutputField(0)
|
||||
diff_op2.AddInput(&k2_field); // Can also use diff_coeff_2.OutputField(0)
|
||||
}
|
||||
|
||||
// Assemble DAG: topological sort, validate nodes, etc.
|
||||
dag.Assemble();
|
||||
|
||||
std::string output_prefix = ctx.coupled ? "Coupled_Diffusion" : "Uncoupled_Diffusion";
|
||||
|
||||
if(Mpi::Root())
|
||||
{
|
||||
std::ofstream fout(output_prefix+"-dag.txt");
|
||||
fout << "{\n";
|
||||
dag.Save(fout);
|
||||
fout << "}\n";
|
||||
fout << std::flush;
|
||||
fout.close();
|
||||
}
|
||||
|
||||
// Set initial guess and boundary conditions for T1 and T2
|
||||
Array<int> ess_tdofs;
|
||||
fes.GetBoundaryTrueDofs(ess_tdofs);
|
||||
|
||||
int T1_idx = 0;
|
||||
int T2_idx = 1;
|
||||
|
||||
BlockVector xb(dag.InputOffsets());
|
||||
BlockVector yb(dag.OutputOffsets());
|
||||
|
||||
xb.GetBlock(T1_idx).Randomize();
|
||||
xb.GetBlock(T2_idx).Randomize();
|
||||
xb.GetBlock(T1_idx).SetSubVector(ess_tdofs, 0.0);
|
||||
xb.GetBlock(T2_idx).SetSubVector(ess_tdofs, 0.0);
|
||||
|
||||
// Build the nonlinear solver and linear solver for the DAG
|
||||
NewtonSolver newton_solver(pmesh.GetComm());
|
||||
GMRESSolver linear_solver(pmesh.GetComm());
|
||||
linear_solver.SetKDim(500);
|
||||
SetSolverParameters(&newton_solver, ctx.tol_nsolve, 0.0, ctx.nl_iter, 1, true);
|
||||
SetSolverParameters(&linear_solver, ctx.tol_lsolve, 0.0, ctx.lin_iter, 1, false);
|
||||
|
||||
newton_solver.SetPreconditioner(linear_solver);
|
||||
linear_solver.SetPrintLevel(1);
|
||||
|
||||
// Set the gradient mode for the DAG and solve the coupled system
|
||||
GradMode gm = static_cast<GradMode>(ctx.grad_mode);
|
||||
dag.SetGradientMode(gm);
|
||||
newton_solver.SetOperator(dag);
|
||||
newton_solver.Mult(xb, yb);
|
||||
|
||||
ParaViewDataCollection *pv = nullptr;
|
||||
if (ctx.visualization)
|
||||
{
|
||||
std::string pv_prefix;
|
||||
switch (ctx.grad_mode)
|
||||
{
|
||||
case 0: pv_prefix = "FD"; break;
|
||||
case 1: pv_prefix = "MF"; break;
|
||||
default: pv_prefix = "Unknown"; break;
|
||||
}
|
||||
|
||||
pv = new ParaViewDataCollection(output_prefix+"-"+pv_prefix, &pmesh);
|
||||
pv->SetLevelsOfDetail(order);
|
||||
pv->SetDataFormat(VTKFormat::BINARY);
|
||||
pv->SetHighOrderOutput(true);
|
||||
|
||||
ParGridFunction T1_gf(&fes);
|
||||
ParGridFunction T2_gf(&fes);
|
||||
T1_gf.SetFromTrueDofs(yb.GetBlock(T1_idx));
|
||||
T2_gf.SetFromTrueDofs(yb.GetBlock(T2_idx));
|
||||
|
||||
pv->RegisterField("T1", &T1_gf);
|
||||
pv->RegisterField("T2", &T2_gf);
|
||||
pv->Save();
|
||||
delete pv;
|
||||
}
|
||||
|
||||
std::cout << "Finished solving the coupled diffusion problem." << std::endl;
|
||||
return 0;
|
||||
}
|
||||
|
||||
void SetSolverParameters(IterativeSolver *solver, real_t rtol, real_t atol,
|
||||
int max_it, int print_level, bool iterative_mode)
|
||||
{
|
||||
solver->SetRelTol(rtol);
|
||||
solver->SetAbsTol(atol);
|
||||
solver->SetMaxIter(max_it);
|
||||
solver->SetPrintLevel(print_level);
|
||||
solver->iterative_mode = iterative_mode;
|
||||
}
|
||||
@@ -1,873 +0,0 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#include "multiapp.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
DAGraph::~DAGraph()
|
||||
{
|
||||
for(int i=0; i < nnodes; i++)
|
||||
{
|
||||
if(node_owned[i] && nodes[i]) delete nodes[i];
|
||||
}
|
||||
if(grad) delete grad;
|
||||
}
|
||||
|
||||
void DAGraph::Assemble()
|
||||
{
|
||||
// Sort graph nodes topologically to ensure correct execution order
|
||||
// Ordering is not unique, hence, id->index maps are needed
|
||||
TopologicalSort();
|
||||
|
||||
// Collect all fields from the nodes into the field map
|
||||
CollectFieldMaps();
|
||||
|
||||
// Compute depth of the graph nodes
|
||||
ComputeDepth();
|
||||
|
||||
// Validate each node
|
||||
for (auto &node : nodes)
|
||||
{
|
||||
ValidateNode(*node);
|
||||
}
|
||||
|
||||
// Update width and height of the DAG from offsets
|
||||
// Check that the input and output offsets are consistent
|
||||
ValidateOffsets();
|
||||
width = input_offsets.Last();
|
||||
height = output_offsets.Last();
|
||||
|
||||
// Delete any existing gradient operator as node ordering may have changed
|
||||
if (grad) delete grad;
|
||||
|
||||
assembled = true;
|
||||
}
|
||||
|
||||
void DAGraph::ValidateOffsets()
|
||||
{
|
||||
// Check that the input and output offsets are consistent
|
||||
// with the number of inputs and outputs
|
||||
if(InputFields().Size() > 1)
|
||||
{
|
||||
MFEM_ASSERT(input_offsets.Size() == InputFields().Size() + 1,
|
||||
"Input offsets size inconsistent with number of input fields");
|
||||
}
|
||||
else
|
||||
{
|
||||
input_offsets = Array<int>({0, nodes[0]->Width()});
|
||||
}
|
||||
|
||||
if(OutputFields().Size() > 1)
|
||||
{
|
||||
MFEM_ASSERT(output_offsets.Size() == OutputFields().Size() + 1,
|
||||
"Output offsets size inconsistent with number of output fields");
|
||||
}
|
||||
else
|
||||
{
|
||||
output_offsets = Array<int>({0, nodes.Last()->Height()});
|
||||
}
|
||||
}
|
||||
|
||||
void DAGraph::ValidateNode(GraphNode &node)
|
||||
{
|
||||
// Validate that the node's input and output fields are consistent with the graph's field map
|
||||
auto inputs = node.InputFields();
|
||||
auto outputs = node.OutputFields();
|
||||
|
||||
// Check offsets match width and height of the node
|
||||
MFEM_ASSERT(node.InputOffsets().Last() == node.Width(),
|
||||
"Node ID: " << node.ID() << " input offsets do not match node width.");
|
||||
MFEM_ASSERT(node.OutputOffsets().Last() == node.Height(),
|
||||
"Node ID: " << node.ID() << " output offsets do not match node height.");
|
||||
|
||||
// Check number of input and output fields match the offsets
|
||||
MFEM_ASSERT(node.InputOffsets().Size() == inputs.Size() + 1,
|
||||
"Node input offsets size inconsistent with number of input fields");
|
||||
MFEM_ASSERT(node.OutputOffsets().Size() == outputs.Size() + 1,
|
||||
"Node output offsets size inconsistent with number of output fields");
|
||||
|
||||
// Check that all input and output fields are registered in the graph's field map
|
||||
for(auto input_field : inputs)
|
||||
{
|
||||
MFEM_ASSERT(fid_to_index.Has(input_field->ID()),
|
||||
"Input field ID " << input_field->ID() << " not found in graph's field map");
|
||||
}
|
||||
for(auto output_field : outputs)
|
||||
{
|
||||
MFEM_ASSERT(fid_to_index.Has(output_field->ID()),
|
||||
"Output field ID " << output_field->ID() << " not found in graph's field map");
|
||||
}
|
||||
}
|
||||
|
||||
void DAGraph::TopologicalSort()
|
||||
{
|
||||
Array<int> sorted_indices;
|
||||
sorted_indices.Reserve(nnodes);
|
||||
|
||||
Array<bool> visited(nnodes);
|
||||
visited = false; // Initialize all nodes as unvisited
|
||||
|
||||
// Perform a depth-first search to sort the nodes topologically
|
||||
std::function<void(int)> DepthFirstSearch = [&](int node_index)
|
||||
{
|
||||
if(visited[node_index]) return;
|
||||
visited[node_index] = true;
|
||||
auto node = nodes[node_index];
|
||||
// Visit all nodes that this node depends on
|
||||
for(auto input_field : node->InputFields())
|
||||
{
|
||||
for(int j=0; j < nnodes; j++)
|
||||
{
|
||||
auto other_node = nodes[j];
|
||||
if(other_node == node) continue;
|
||||
for(auto output_field : other_node->OutputFields())
|
||||
{
|
||||
if(input_field->ID() == output_field->ID()) // Compare by unique ID
|
||||
{
|
||||
DepthFirstSearch(j);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
sorted_indices.push_back(node_index);
|
||||
};
|
||||
|
||||
for(int i=0; i < nnodes; i++)
|
||||
{
|
||||
DepthFirstSearch(i);
|
||||
}
|
||||
|
||||
nodes.Permute(sorted_indices);
|
||||
node_owned.Permute(sorted_indices);
|
||||
|
||||
// Update the node indices after sorting
|
||||
for(int i=0; i < nnodes; i++)
|
||||
{
|
||||
nodes[i]->SetNodeIndex(i);
|
||||
}
|
||||
|
||||
sorted = true;
|
||||
}
|
||||
|
||||
void DAGraph::ComputeDepth()
|
||||
{
|
||||
// Compute depth of ordered nodes
|
||||
node_depth.SetSize(nnodes);
|
||||
node_depth = 0;
|
||||
for(int i=0; i < nnodes; i++)
|
||||
{
|
||||
int max_depth = 0;
|
||||
auto node = nodes[i];
|
||||
for(auto input_field : node->InputFields())
|
||||
{
|
||||
for(int j=0; j < i; j++)
|
||||
{
|
||||
auto other_node = nodes[j];
|
||||
if(other_node == node) continue;
|
||||
for(auto output_field : other_node->OutputFields())
|
||||
{
|
||||
if(input_field->ID() == output_field->ID()) // Compare by unique ID
|
||||
{
|
||||
max_depth = std::max(max_depth, node_depth[j] + 1);
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
node_depth[i] = max_depth;
|
||||
}
|
||||
}
|
||||
|
||||
void DAGraph::CollectFieldMaps()
|
||||
{
|
||||
MFEM_ASSERT(sorted, "DAGraph must be topologically sorted before collecting fields");
|
||||
|
||||
fid_to_index.clear();
|
||||
fid_to_field.clear();
|
||||
|
||||
int nfields = 0;
|
||||
for (auto f : InputFields())
|
||||
{
|
||||
fid_to_index.Register(f->ID(), nfields++);
|
||||
fid_to_field.Register(f->ID(), f);
|
||||
}
|
||||
|
||||
for (auto &node : nodes)
|
||||
{
|
||||
for (auto f : node->OutputFields())
|
||||
{
|
||||
if (!fid_to_index.Has(f->ID()))
|
||||
{
|
||||
fid_to_index.Register(f->ID(), nfields++);
|
||||
}
|
||||
if (!fid_to_field.Has(f->ID()))
|
||||
{
|
||||
fid_to_field.Register(f->ID(), f);
|
||||
}
|
||||
}
|
||||
}
|
||||
// TODO: Possibly add all intermediate fields from nodes to the graph's FieldCollection
|
||||
}
|
||||
|
||||
void DAGraph::Mult(const Vector &x, Vector &y) const
|
||||
{
|
||||
MFEM_ASSERT(width == x.Size(), "Input vector size (" << x.Size()
|
||||
<< ") must match matrix width (" << width << ")");
|
||||
|
||||
MFEM_ASSERT(height == y.Size(), "Output vector size (" << y.Size()
|
||||
<< ") must match matrix height (" << height << ")");
|
||||
|
||||
auto inputs = InputFields();
|
||||
auto outputs = OutputFields();
|
||||
|
||||
BlockVector xb(x.GetData(), input_offsets);
|
||||
BlockVector yb(y.GetData(), output_offsets);
|
||||
MultiVector xmv(inputs.Size()), ymv(outputs.Size());
|
||||
|
||||
// Set the data pointers of the input and output fields
|
||||
// of the graph to point to the corresponding blocks of
|
||||
// the input and output vectors
|
||||
for(int i=0; i < inputs.Size(); i++)
|
||||
{
|
||||
xmv.MakeRef(i, xb.GetBlock(i));
|
||||
}
|
||||
|
||||
for(int i=0; i < outputs.Size(); i++)
|
||||
{
|
||||
ymv.MakeRef(i, yb.GetBlock(i));
|
||||
}
|
||||
|
||||
const_cast<DAGraph*>(this)->Mult(xmv, ymv);
|
||||
}
|
||||
|
||||
void DAGraph::Mult(const MultiVector &x, MultiVector &y)
|
||||
{
|
||||
auto inputs = InputFields();
|
||||
auto outputs = OutputFields();
|
||||
|
||||
MFEM_ASSERT(inputs.Size() == x.NumBlocks(), "Number of input blocks (" << x.NumBlocks()
|
||||
<< ") must match number of input fields (" << inputs.Size() << ")");
|
||||
|
||||
MFEM_ASSERT(outputs.Size() == y.NumBlocks(), "Number of output blocks (" << y.NumBlocks()
|
||||
<< ") must match number of output fields (" << outputs.Size() << ")");
|
||||
|
||||
for(int i=0; i < inputs.Size(); i++)
|
||||
{
|
||||
inputs[i]->SetData(const_cast<Vector*>(&x[i]));
|
||||
}
|
||||
for (int i=0; i < outputs.Size(); i++)
|
||||
{
|
||||
outputs[i]->SetData(&y[i]);
|
||||
}
|
||||
|
||||
auto index_map = GetFieldIdToIndexMap();
|
||||
auto fld_map = GetFieldIdToFieldMap();
|
||||
int nfields = index_map.NumFields();
|
||||
MultiVector ymv(nfields); // TODO: Should this be a member function?
|
||||
|
||||
// Assemble the multivector from the individual fields based on their IDs
|
||||
// This multivector contains all input, output, and intermediate fields in the graph
|
||||
for (auto const& [id, idx] : index_map)
|
||||
{
|
||||
if (fld_map.Has(id))
|
||||
{
|
||||
auto field = fld_map.Get(id);
|
||||
ymv.MakeRef(idx, *field->Data());
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Field ID " << id << " not found in field map");
|
||||
}
|
||||
}
|
||||
|
||||
Execute(x, ymv);
|
||||
|
||||
for(auto &f : inputs)
|
||||
{
|
||||
f->SetData(nullptr);
|
||||
}
|
||||
for(auto &f : outputs)
|
||||
{
|
||||
f->SetData(nullptr);
|
||||
}
|
||||
}
|
||||
|
||||
void DAGraph::Execute(const MultiVector &x, MultiVector &y) const
|
||||
{
|
||||
MFEM_ASSERT(assembled, "DAGraph must be assembled before calling Execute()");
|
||||
|
||||
MFEM_ASSERT(x.NumBlocks() == InputFields().Size(),
|
||||
"Number of input blocks (" << x.NumBlocks()
|
||||
<< ") must match number of input fields (" << InputFields().Size() << ")");
|
||||
|
||||
auto index_map = GetFieldIdToIndexMap();
|
||||
|
||||
MFEM_ASSERT(y.NumBlocks() == index_map.NumFields(),
|
||||
"Number of output blocks (" << y.NumBlocks()
|
||||
<< ") must match number of fields (" << index_map.NumFields() << ")");
|
||||
|
||||
auto inputs = InputFields();
|
||||
for(int i=0; i < inputs.Size(); i++)
|
||||
{
|
||||
int idx = index_map.Get(inputs[i]->ID());
|
||||
if(&y[idx] != &x[i]) // copy data, if address is different
|
||||
{
|
||||
y[idx] = x[i];
|
||||
}
|
||||
}
|
||||
|
||||
if(input_type == InputType::VECTOR)
|
||||
{
|
||||
x_node.SetSize(MaxWidth());
|
||||
y_node.SetSize(MaxHeight());
|
||||
|
||||
for (auto node : nodes)
|
||||
{
|
||||
x_node.SetSize(node->Width());
|
||||
y_node.SetSize(node->Height());
|
||||
|
||||
// Assemble input fields into a single vector for the node
|
||||
auto node_inputs = node->InputFields();
|
||||
auto ioffsets = node->InputOffsets();
|
||||
for (int i=0; i < node_inputs.Size(); i++)
|
||||
{
|
||||
auto in_field = node_inputs[i];
|
||||
int idx = index_map.Get(in_field->ID());
|
||||
x_node.SetVector(y[idx],ioffsets[i]);
|
||||
}
|
||||
|
||||
node->Mult(x_node, y_node);
|
||||
|
||||
// Disassemble output vector back
|
||||
auto node_outputs = node->OutputFields();
|
||||
BlockVector ynb(y_node.GetData(), node->OutputOffsets());
|
||||
for (int i=0; i < node_outputs.Size(); i++)
|
||||
{
|
||||
auto out_field = node_outputs[i];
|
||||
int idx = index_map.Get(out_field->ID());
|
||||
y[idx] = ynb.GetBlock(i);
|
||||
}
|
||||
}
|
||||
}
|
||||
else if(input_type == InputType::MULTIVECTOR)
|
||||
{
|
||||
for (auto node : nodes)
|
||||
{
|
||||
auto node_inputs = node->InputFields();
|
||||
auto node_outputs = node->OutputFields();
|
||||
xmv_node.SetNumBlocks(node_inputs.Size());
|
||||
ymv_node.SetNumBlocks(node_outputs.Size());
|
||||
|
||||
for (int i=0; i < node_inputs.Size(); i++)
|
||||
{
|
||||
int idx = index_map.Get(node_inputs[i]->ID());
|
||||
xmv_node.MakeRef(i, y[idx]);
|
||||
}
|
||||
for (int i=0; i < node_outputs.Size(); i++)
|
||||
{
|
||||
int idx = index_map.Get(node_outputs[i]->ID());
|
||||
ymv_node.MakeRef(i, y[idx]);
|
||||
}
|
||||
node->Mult(xmv_node, ymv_node);
|
||||
}
|
||||
}
|
||||
else if(input_type == InputType::NONE)
|
||||
{
|
||||
Vector x_unused, y_unused;
|
||||
for (auto node : nodes)
|
||||
{
|
||||
node->Mult(x_unused, y_unused);
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("DAGraph::Execute() not implemented for input type: "
|
||||
<< static_cast<int>(input_type));
|
||||
}
|
||||
}
|
||||
|
||||
Operator& DAGraph::GetGradient(const Vector &x) const
|
||||
{
|
||||
// TODO: Should/could be removed
|
||||
if(grad_mode == GradMode::FINITE_DIFF)
|
||||
{
|
||||
if(!grad)
|
||||
{
|
||||
grad = new future::FDJacobian(*this, x, 1e-6);
|
||||
}
|
||||
else
|
||||
{
|
||||
grad->GetGradient(x); // Update the FDJacobian with new point x
|
||||
}
|
||||
return *grad;
|
||||
}
|
||||
|
||||
MFEM_ASSERT(static_cast<int>(grad_mode) < static_cast<int>(GradMode::NONE),
|
||||
"DAGraph::GetGradient() called with invalid grad_mode: "
|
||||
<< static_cast<int>(grad_mode));
|
||||
|
||||
if(!grad)
|
||||
{
|
||||
grad = new GraphGradient(const_cast<DAGraph&>(*this));
|
||||
}
|
||||
|
||||
if(grad_mode == GradMode::ASSEMBLED)
|
||||
{
|
||||
return grad->GetGradient(x); // Assemble the Jacobian matrix
|
||||
}
|
||||
else // GradMode::MATRIX_FREE
|
||||
{
|
||||
dynamic_cast<GraphGradient*>(grad)->Update(x); // Update the GraphGradient with new point x
|
||||
}
|
||||
|
||||
return *grad;
|
||||
}
|
||||
|
||||
GraphGradient::GraphGradient(DAGraph &dag) : Operator(dag.Height(), dag.Width()),
|
||||
graph(&dag)
|
||||
{
|
||||
MFEM_ASSERT(graph->IsAssembled(), "GraphGradient requires an assembled DAGraph.");
|
||||
MFEM_ASSERT(graph->IsSorted(), "GraphGradient requires a topologically sorted DAGraph.");
|
||||
|
||||
auto index_map = graph->GetFieldIdToIndexMap();
|
||||
auto field_map = graph->GetFieldIdToFieldMap();
|
||||
|
||||
MFEM_ASSERT(index_map.NumFields() == field_map.NumFields(),
|
||||
"Mismatch in number of fields between index_map and field_map");
|
||||
|
||||
x_work.DeleteAll(); // Clear any existing pointers
|
||||
x_work.SetSize(index_map.NumFields());
|
||||
x_work = nullptr; // Initialize all pointers to nullptr
|
||||
xlin.SetNumBlocks(index_map.NumFields());
|
||||
|
||||
for (auto const& [id, idx] : index_map)
|
||||
{
|
||||
MFEM_ASSERT(idx >= 0 && idx < x_work.Size(), "Index out of bounds for field ID: " << id);
|
||||
MFEM_ASSERT(field_map.Has(id), "Field ID not found in field_map: " << id);
|
||||
|
||||
if(x_work[idx] == nullptr)
|
||||
{
|
||||
x_work[idx] = new Vector(); // Allocate a new Vector for this field
|
||||
}
|
||||
xlin.MakeRef(idx, *x_work[idx]); // Make xlin refer to the allocated Vector
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
void GraphGradient::Update(const Vector &x)
|
||||
{
|
||||
MFEM_ASSERT(graph != nullptr, "GraphGradient operator requires a non-null DAGraph pointer.");
|
||||
|
||||
auto set_exec_mode = [&](DAGraph::ExecutionMode mode)
|
||||
{
|
||||
for (auto &node : graph->Nodes())
|
||||
{
|
||||
node->SetExecutionMode(mode);
|
||||
}
|
||||
};
|
||||
|
||||
auto inputs = graph->InputFields();
|
||||
BlockVector xb(x.GetData(), graph->InputOffsets());
|
||||
MultiVector xmv(inputs.Size());
|
||||
for(int i=0; i < inputs.Size(); i++)
|
||||
{
|
||||
xmv.MakeRef(i, xb.GetBlock(i));
|
||||
}
|
||||
|
||||
set_exec_mode(DAGraph::ExecutionMode::GRADIENT_MODE);
|
||||
graph->Execute(xmv, xlin); // Forward pass to populate fields for gradient computations
|
||||
set_exec_mode(DAGraph::ExecutionMode::DEFAULT_MODE); // Reset execution mode for forward pass
|
||||
}
|
||||
|
||||
void GraphGradient::Mult(const Vector &x, Vector &y) const
|
||||
{
|
||||
MFEM_ASSERT(x.Size() == graph->Width(), "Input vector size (" << x.Size()
|
||||
<< ") must match graph width (" << graph->Width() << ")");
|
||||
|
||||
MFEM_ASSERT(y.Size() == graph->Height(), "Output vector size (" << y.Size()
|
||||
<< ") must match graph height (" << graph->Height() << ")");
|
||||
|
||||
auto in_offsets = graph->InputOffsets();
|
||||
auto out_offsets = graph->OutputOffsets();
|
||||
|
||||
auto inputs = graph->InputFields();
|
||||
auto outputs = graph->OutputFields();
|
||||
|
||||
BlockVector xb(x.GetData(), in_offsets);
|
||||
BlockVector yb(y.GetData(), out_offsets);
|
||||
MultiVector xmv(inputs.Size()), ymv(outputs.Size());
|
||||
|
||||
for(int i=0; i < inputs.Size(); i++)
|
||||
{
|
||||
xmv.MakeRef(i, xb.GetBlock(i));
|
||||
}
|
||||
|
||||
for(int i=0; i < outputs.Size(); i++)
|
||||
{
|
||||
ymv.MakeRef(i, yb.GetBlock(i));
|
||||
}
|
||||
|
||||
const_cast<GraphGradient*>(this)->Mult(xmv, ymv); // Forward mode: compute JVP, y = J(z) * x
|
||||
}
|
||||
|
||||
void GraphGradient::Mult(const MultiVector &x, MultiVector &y)
|
||||
{
|
||||
auto inputs = graph->InputFields();
|
||||
auto outputs = graph->OutputFields();
|
||||
|
||||
MFEM_ASSERT(inputs.Size() == x.NumBlocks(), "Number of input blocks (" << x.NumBlocks()
|
||||
<< ") must match number of input fields (" << inputs.Size() << ")");
|
||||
|
||||
MFEM_ASSERT(outputs.Size() == y.NumBlocks(), "Number of output blocks (" << y.NumBlocks()
|
||||
<< ") must match number of output fields (" << outputs.Size() << ")");
|
||||
|
||||
for(int i=0; i < inputs.Size(); i++)
|
||||
{
|
||||
inputs[i]->SetAdjoint(const_cast<Vector*>(&x[i]));
|
||||
}
|
||||
for (int i=0; i < outputs.Size(); i++)
|
||||
{
|
||||
outputs[i]->SetAdjoint(&y[i]);
|
||||
}
|
||||
|
||||
auto index_map = graph->GetFieldIdToIndexMap();
|
||||
auto fld_map = graph->GetFieldIdToFieldMap();
|
||||
int nfields = index_map.NumFields();
|
||||
MultiVector ymv(nfields); // TODO: Should this be a member function?
|
||||
|
||||
// Assemble the multivector from the individual fields based on their IDs
|
||||
// This multivector contains all input, output, and intermediate fields in the graph
|
||||
for (auto const& [id, idx] : index_map)
|
||||
{
|
||||
if (fld_map.Has(id))
|
||||
{
|
||||
auto field = fld_map.Get(id);
|
||||
ymv.MakeRef(idx, *field->Adjoint());
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Field ID " << id << " not found in field map");
|
||||
}
|
||||
}
|
||||
|
||||
Forward(x, ymv); // Forward mode: compute JVP, y = J(z) * x
|
||||
|
||||
for (auto &f : inputs)
|
||||
{
|
||||
f->SetAdjoint(nullptr);
|
||||
}
|
||||
for (auto &f : outputs)
|
||||
{
|
||||
f->SetAdjoint(nullptr);
|
||||
}
|
||||
}
|
||||
|
||||
void GraphGradient::MultTranspose(const Vector &x, Vector &y) const
|
||||
{
|
||||
MFEM_ASSERT(x.Size() == graph->Height(), "Input vector size (" << x.Size()
|
||||
<< ") must match graph height (" << graph->Height() << ")");
|
||||
MFEM_ASSERT(y.Size() == graph->Width(), "Output vector size (" << y.Size()
|
||||
<< ") must match graph width (" << graph->Width() << ")");
|
||||
|
||||
auto in_offsets = graph->InputOffsets();
|
||||
auto out_offsets = graph->OutputOffsets();
|
||||
|
||||
auto inputs = graph->InputFields();
|
||||
auto outputs = graph->OutputFields();
|
||||
|
||||
BlockVector xb(x.GetData(), out_offsets);
|
||||
BlockVector yb(y.GetData(), in_offsets);
|
||||
MultiVector xmv(outputs.Size()), ymv(inputs.Size());
|
||||
|
||||
for(int i=0; i < inputs.Size(); i++)
|
||||
{
|
||||
xmv.MakeRef(i, xb.GetBlock(i));
|
||||
}
|
||||
|
||||
for(int i=0; i < outputs.Size(); i++)
|
||||
{
|
||||
ymv.MakeRef(i, yb.GetBlock(i));
|
||||
}
|
||||
const_cast<GraphGradient*>(this)->MultTranspose(xmv, ymv); // Reverse mode: compute VJP, y = J(z)^T * x
|
||||
}
|
||||
|
||||
void GraphGradient::MultTranspose(const MultiVector &x, MultiVector &y)
|
||||
{
|
||||
auto inputs = graph->InputFields();
|
||||
auto outputs = graph->OutputFields();
|
||||
|
||||
MFEM_ASSERT(outputs.Size() == x.NumBlocks(), "Number of input blocks (" << x.NumBlocks()
|
||||
<< ") must match number of output fields (" << outputs.Size() << ")");
|
||||
|
||||
MFEM_ASSERT(inputs.Size() == y.NumBlocks(), "Number of output blocks (" << y.NumBlocks()
|
||||
<< ") must match number of input fields (" << inputs.Size() << ")");
|
||||
|
||||
for(int i=0; i < outputs.Size(); i++)
|
||||
{
|
||||
outputs[i]->SetAdjoint(const_cast<Vector*>(&x[i]));
|
||||
}
|
||||
for (int i=0; i < inputs.Size(); i++)
|
||||
{
|
||||
inputs[i]->SetAdjoint(&y[i]);
|
||||
}
|
||||
|
||||
auto index_map = graph->GetFieldIdToIndexMap();
|
||||
auto fld_map = graph->GetFieldIdToFieldMap();
|
||||
int nfields = index_map.NumFields();
|
||||
MultiVector ymv(nfields); // TODO: Should this be a member function?
|
||||
|
||||
for(auto const& [id, idx] : index_map)
|
||||
{
|
||||
if (fld_map.Has(id))
|
||||
{
|
||||
auto field = fld_map.Get(id);
|
||||
ymv.MakeRef(idx, *field->Adjoint());
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("Field ID " << id << " not found in field map");
|
||||
}
|
||||
}
|
||||
|
||||
Reverse(x, ymv); // Reverse mode: compute VJP, y = J(z)^T * x
|
||||
|
||||
for (auto &f : outputs)
|
||||
{
|
||||
f->SetAdjoint(nullptr);
|
||||
}
|
||||
for (auto &f : inputs)
|
||||
{
|
||||
f->SetAdjoint(nullptr);
|
||||
}
|
||||
}
|
||||
|
||||
void GraphGradient::Forward(const MultiVector &x, MultiVector &y) const
|
||||
{
|
||||
MFEM_ASSERT(x.NumBlocks() == graph->InputFields().Size(),
|
||||
"Number of input blocks (" << x.NumBlocks()
|
||||
<< ") must match number of input fields (" << graph->InputFields().Size() << ")");
|
||||
|
||||
auto in_type = graph->GetInputType();
|
||||
auto index_map = graph->GetFieldIdToIndexMap();
|
||||
auto field_map = graph->GetFieldIdToFieldMap();
|
||||
|
||||
MFEM_ASSERT(y.NumBlocks() == index_map.NumFields(),
|
||||
"Number of output blocks (" << y.NumBlocks()
|
||||
<< ") must match number of fields (" << index_map.NumFields() << ")");
|
||||
|
||||
auto inputs = graph->InputFields();
|
||||
for(int i=0; i < inputs.Size(); i++)
|
||||
{
|
||||
int idx = index_map.Get(inputs[i]->ID());
|
||||
if(&y[idx] != &x[i]) // copy data, if address is different
|
||||
{
|
||||
y[idx] = x[i];
|
||||
}
|
||||
}
|
||||
|
||||
if(in_type == InputType::VECTOR)
|
||||
{
|
||||
x0.SetSize(graph->MaxWidth());
|
||||
dx.SetSize(graph->MaxWidth());
|
||||
dy.SetSize(graph->MaxHeight());
|
||||
|
||||
auto nodes = graph->Nodes();
|
||||
for (auto node : nodes)
|
||||
{
|
||||
x0.SetSize(node->Width());
|
||||
dx.SetSize(node->Width());
|
||||
dy.SetSize(node->Height());
|
||||
|
||||
// Assemble input fields into a single vector for the node
|
||||
auto node_inputs = node->InputFields();
|
||||
auto ioffsets = node->InputOffsets();
|
||||
for(int i=0; i < node_inputs.Size(); i++)
|
||||
{
|
||||
auto in_field = node_inputs[i];
|
||||
MFEM_ASSERT(index_map.Has(in_field->ID()), "Input field ID not found in index_map");
|
||||
int idx = index_map.Get(in_field->ID());
|
||||
x0.SetVector(xlin[idx], ioffsets[i]);
|
||||
dx.SetVector(y[idx], ioffsets[i]);
|
||||
}
|
||||
|
||||
node->GradientMult(x0, dx, dy); // Compute JVP for the node
|
||||
|
||||
// Disassemble output vector back
|
||||
auto node_outputs = node->OutputFields();
|
||||
BlockVector ynb(dy.GetData(), node->OutputOffsets());
|
||||
for(int i=0; i < node_outputs.Size(); i++)
|
||||
{
|
||||
auto out_field = node_outputs[i];
|
||||
MFEM_ASSERT(index_map.Has(out_field->ID()), "Output field ID not found in index_map");
|
||||
int idx = index_map.Get(out_field->ID());
|
||||
y[idx] = ynb.GetBlock(i);
|
||||
}
|
||||
}
|
||||
}
|
||||
else if(in_type == InputType::MULTIVECTOR)
|
||||
{
|
||||
auto nodes = graph->Nodes();
|
||||
for (auto node : nodes)
|
||||
{
|
||||
auto node_inputs = node->InputFields();
|
||||
auto node_outputs = node->OutputFields();
|
||||
x0_mv.SetNumBlocks(node_inputs.Size());
|
||||
dx_mv.SetNumBlocks(node_inputs.Size());
|
||||
dy_mv.SetNumBlocks(node_outputs.Size());
|
||||
|
||||
for(int i=0; i < node_inputs.Size(); i++)
|
||||
{
|
||||
int idx = index_map.Get(node_inputs[i]->ID());
|
||||
x0_mv.MakeRef(i, xlin[idx]);
|
||||
dx_mv.MakeRef(i, y[idx]);
|
||||
}
|
||||
for(int i=0; i < node_outputs.Size(); i++)
|
||||
{
|
||||
int idx = index_map.Get(node_outputs[i]->ID());
|
||||
dy_mv.MakeRef(i, y[idx]);
|
||||
}
|
||||
node->GradientMult(x0_mv, dx_mv, dy_mv); // Compute JVP for the node
|
||||
}
|
||||
}
|
||||
else if(in_type == InputType::NONE)
|
||||
{
|
||||
Vector x_unused, dx_unused, dy_unused;
|
||||
auto nodes = graph->Nodes();
|
||||
for (auto node : nodes)
|
||||
{
|
||||
node->GradientMult(x_unused, dx_unused, dy_unused);
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("GraphGradient::Forward() not implemented for input type: "
|
||||
<< static_cast<int>(in_type));
|
||||
}
|
||||
}
|
||||
|
||||
void GraphGradient::Reverse(const MultiVector &x, MultiVector &y) const
|
||||
{
|
||||
MFEM_ASSERT(x.NumBlocks() == graph->OutputFields().Size(),
|
||||
"Number of input blocks (" << x.NumBlocks()
|
||||
<< ") must match number of output fields (" << graph->OutputFields().Size() << ")");
|
||||
|
||||
auto in_type = graph->GetInputType();
|
||||
auto index_map = graph->GetFieldIdToIndexMap();
|
||||
auto field_map = graph->GetFieldIdToFieldMap();
|
||||
int nnodes = graph->Size();
|
||||
|
||||
MFEM_ASSERT(y.NumBlocks() == index_map.NumFields(),
|
||||
"Number of output blocks (" << y.NumBlocks()
|
||||
<< ") must match number of fields (" << index_map.NumFields() << ")");
|
||||
|
||||
auto outputs = graph->OutputFields();
|
||||
for(int i=0; i < outputs.Size(); i++)
|
||||
{
|
||||
int idx = index_map.Get(outputs[i]->ID());
|
||||
if(&y[idx] != &x[i]) // copy data, if address is different
|
||||
{
|
||||
y[idx] = x[i];
|
||||
}
|
||||
}
|
||||
|
||||
if(in_type == InputType::VECTOR)
|
||||
{
|
||||
x0.SetSize(graph->MaxWidth());
|
||||
dx.SetSize(graph->MaxHeight());
|
||||
dy.SetSize(graph->MaxWidth());
|
||||
|
||||
for (int i=nnodes-1; i >= 0; i--)
|
||||
{
|
||||
auto node = graph->GetNode(i);
|
||||
x0.SetSize(node->Width());
|
||||
dx.SetSize(node->Height());
|
||||
dy.SetSize(node->Width());
|
||||
|
||||
auto node_inputs = node->InputFields();
|
||||
auto ioffsets = node->InputOffsets();
|
||||
for(int i=0; i < node_inputs.Size(); i++)
|
||||
{
|
||||
auto in_field = node_inputs[i];
|
||||
MFEM_ASSERT(index_map.Has(in_field->ID()), "Input field ID not found in index_map");
|
||||
int idx = index_map.Get(in_field->ID());
|
||||
x0.SetVector(xlin[idx], ioffsets[i]);
|
||||
}
|
||||
|
||||
auto node_outputs = node->OutputFields();
|
||||
auto ooffsets = node->OutputOffsets();
|
||||
for(int i=0; i < node_outputs.Size(); i++)
|
||||
{
|
||||
auto out_field = node_outputs[i];
|
||||
MFEM_ASSERT(index_map.Has(out_field->ID()), "Output field ID not found in index_map");
|
||||
int idx = index_map.Get(out_field->ID());
|
||||
dx.SetVector(y[idx], ooffsets[i]);
|
||||
}
|
||||
|
||||
node->GradientMultTranspose(x0, dx, dy); // Compute JVP for the node
|
||||
|
||||
BlockVector dynb(dy.GetData(), node->InputOffsets());
|
||||
for(int i=0; i < node_inputs.Size(); i++)
|
||||
{
|
||||
int idx = index_map.Get(node_inputs[i]->ID());
|
||||
y[idx] = dynb.GetBlock(i);
|
||||
}
|
||||
}
|
||||
}
|
||||
else if(in_type == InputType::MULTIVECTOR)
|
||||
{
|
||||
for (int i=nnodes-1; i >= 0; i--)
|
||||
{
|
||||
auto node = graph->GetNode(i);
|
||||
auto node_inputs = node->InputFields();
|
||||
auto node_outputs = node->OutputFields();
|
||||
x0_mv.SetNumBlocks(node_inputs.Size());
|
||||
dx_mv.SetNumBlocks(node_outputs.Size());
|
||||
dy_mv.SetNumBlocks(node_inputs.Size());
|
||||
|
||||
for(int i=0; i < node_inputs.Size(); i++)
|
||||
{
|
||||
int idx = index_map.Get(node_inputs[i]->ID());
|
||||
x0_mv.MakeRef(i, xlin[idx]);
|
||||
dy_mv.MakeRef(i, y[idx]);
|
||||
}
|
||||
for(int i=0; i < node_outputs.Size(); i++)
|
||||
{
|
||||
int idx = index_map.Get(node_outputs[i]->ID());
|
||||
dx_mv.MakeRef(i, y[idx]);
|
||||
}
|
||||
node->GradientMultTranspose(x0_mv, dx_mv, dy_mv); // Compute JVP for the node
|
||||
}
|
||||
}
|
||||
else if(in_type == InputType::NONE)
|
||||
{
|
||||
Vector x_unused, dx_unused, dy_unused;
|
||||
for (int i=nnodes-1; i >= 0; i--)
|
||||
{
|
||||
auto node = graph->GetNode(i);
|
||||
node->GradientMultTranspose(x_unused, dx_unused, dy_unused); // Compute VJP for the node
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("GraphGradient::Reverse() not implemented for input type: "
|
||||
<< static_cast<int>(in_type));
|
||||
}
|
||||
}
|
||||
|
||||
Operator& GraphGradient::GetGradient(const Vector &x) const
|
||||
{
|
||||
// Used to build Jacobian matrix
|
||||
MFEM_ABORT("GraphGradient::GetGradient() not implemented");
|
||||
}
|
||||
|
||||
|
||||
} // namespace mfem
|
||||
@@ -1,838 +0,0 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
// This file is part of the MFEM library. For more information and source code
|
||||
// availability visit https://mfem.org.
|
||||
//
|
||||
// MFEM is free software; you can redistribute it and/or modify it under the
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
|
||||
#ifndef MFEM_MULTIAPP_HPP
|
||||
#define MFEM_MULTIAPP_HPP
|
||||
|
||||
#include "mfem.hpp"
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
/// Forward declarations needed below
|
||||
class Field;
|
||||
class FieldCollection;
|
||||
class GraphNode;
|
||||
class DAGraph;
|
||||
class GraphGradient;
|
||||
|
||||
|
||||
/// @brief Base class for storing data (Vector) and distinguishing
|
||||
/// fields variables
|
||||
class Field
|
||||
{
|
||||
public:
|
||||
enum Type ///< Not used for now, but could be used to distinguish between input/output fields
|
||||
{
|
||||
INPUT , ///< Input field
|
||||
OUTPUT, ///< Output field
|
||||
DEFAULT ///< Any field
|
||||
};
|
||||
|
||||
friend class GraphNode;
|
||||
|
||||
private:
|
||||
Type type = Type::DEFAULT;
|
||||
inline static int next_id = 0;
|
||||
|
||||
protected:
|
||||
Vector *data = nullptr;
|
||||
Vector *adjoint = nullptr; // For storing derivative info
|
||||
int id = -1; // initialized to invalid id
|
||||
|
||||
std::string name; // Optional name for the field
|
||||
Operator *oper = nullptr; // Operator that outputs this field
|
||||
|
||||
int GetValidID(int id_, int lb=0, int ub = std::numeric_limits<int>::max())
|
||||
{
|
||||
return (id_ >= lb && id_ <= ub) ? id_ : next_id++;
|
||||
}
|
||||
|
||||
public:
|
||||
|
||||
///@brief Constructor for a Field of type Type with optional ID
|
||||
Field(Vector *field, Vector *adjoint, Type type, int id_ = -1) :
|
||||
type(type), data(field), adjoint(adjoint), id(GetValidID(id_)),
|
||||
name("Field_" + std::to_string(id)) { }
|
||||
|
||||
///@brief Constructor for a Field of Default type with optional ID
|
||||
Field(Vector *field, Vector *adjoint, int id_ = -1) :
|
||||
Field(field, adjoint, Type::DEFAULT, id_) { }
|
||||
|
||||
///@brief Constructor for an input field
|
||||
Field(Vector *field, int id_ = -1) :
|
||||
Field(field, nullptr, Type::DEFAULT, id_) { }
|
||||
|
||||
///@brief Constructor for a Field of type Type
|
||||
Field(Vector *field, Type type, int id_ = -1) :
|
||||
Field(field, nullptr, type, id_) { }
|
||||
|
||||
///@brief Get the stored internally stored data pointer
|
||||
Vector* Data() const { return data; }
|
||||
Vector* Adjoint() const { return adjoint; }
|
||||
Operator* GetOperator() const { return oper; }
|
||||
|
||||
///@brief Set the internally stored data pointer
|
||||
virtual void SetData(Vector *field) { data = field; }
|
||||
virtual void SetAdjoint(Vector *adj) { adjoint = adj; }
|
||||
virtual void SetOperator(Operator *op) { oper = op; }
|
||||
|
||||
virtual void GetData(Vector &field) const { field = *data; }
|
||||
virtual void GetAdjoint(Vector &adj) const { adj = *adjoint; }
|
||||
|
||||
std::string Name() const { return name; }
|
||||
void SetName(const std::string &n) { name = n; }
|
||||
int ID() const { return id; }
|
||||
|
||||
void SetID(int i)
|
||||
{
|
||||
MFEM_ASSERT(i >= 0, "ID must be non-negative.");
|
||||
id = i;
|
||||
}
|
||||
|
||||
bool IsInput() const {return (type == Type::INPUT);}
|
||||
bool IsOutput() const {return (type == Type::OUTPUT);}
|
||||
bool IsDefault() const {return (type == Type::DEFAULT);}
|
||||
|
||||
virtual ~Field() = default;
|
||||
|
||||
protected:
|
||||
|
||||
///@brief Set the type of the field (prevents changing type of input/output fields)
|
||||
void SetType(Type t)
|
||||
{
|
||||
type = t;
|
||||
}
|
||||
};
|
||||
|
||||
/// @brief A collection of Fields, each identified by a name
|
||||
class FieldCollection
|
||||
{
|
||||
public:
|
||||
using FieldMap = GenericFieldMap<std::string, Field*>;
|
||||
using IndexMap = GenericFieldMap<std::string, int>;
|
||||
|
||||
private:
|
||||
std::string name; /// Name of the collection
|
||||
Operator *oper = nullptr; /// Operator associated with this collection (not owned)
|
||||
FieldMap fields; /// Map from field name to Field pointer
|
||||
IndexMap index_map; /// Map from field name to index in input/output vectors
|
||||
|
||||
Array<Field*> input_fields; // Input fields for this node
|
||||
Array<Field*> output_fields; // Output fields for this node
|
||||
|
||||
public:
|
||||
|
||||
FieldCollection() = default;
|
||||
|
||||
/// @brief Constructor with collection name and optional associated operator
|
||||
FieldCollection(std::string collection_name, Operator *op = nullptr):
|
||||
name(collection_name), oper(op) {}
|
||||
|
||||
/// @brief Constructor with associated operator and default collection name
|
||||
FieldCollection(Operator *op) : name("FieldCollection"), oper(op) {}
|
||||
|
||||
/// @brief Get the number of fields in the collection
|
||||
int Size() const { return fields.NumFields(); }
|
||||
|
||||
/// @brief Set the name of the collection
|
||||
void SetName(const std::string &collection_name) { name = collection_name;}
|
||||
|
||||
/// @brief Get the name of the collection
|
||||
std::string Name() const { return name; }
|
||||
|
||||
/// @brief Set the operator associated with this collection
|
||||
void SetOperator(Operator *op){ oper = op; }
|
||||
|
||||
/// @brief Get the operator associated with this collection
|
||||
const Operator* GetOperator() const { return oper; }
|
||||
|
||||
/// @brief Get the field associated with the given name, or nullptr if not found
|
||||
Field* GetField(const std::string &field_name) const
|
||||
{
|
||||
return fields.Get(field_name);
|
||||
}
|
||||
|
||||
/// @brief Add a field to the collection with a given name and ownership flag
|
||||
void AddField(const std::string &field_name, Field *field, bool own = false)
|
||||
{
|
||||
if(fields.Has(field_name))
|
||||
{
|
||||
MFEM_WARNING("FieldCollection::AddField: Field with name "
|
||||
<< field_name << " already exists. Replacing existing field.");
|
||||
}
|
||||
fields.Register(field_name, field, own);
|
||||
}
|
||||
|
||||
void AddInput(const std::string &field_name,
|
||||
Field *field, bool own = false)
|
||||
{
|
||||
bool has_field = fields.Has(field_name);
|
||||
bool has_index = index_map.Has(field_name);
|
||||
if(has_field && has_index)
|
||||
{
|
||||
int i = index_map.Get(field_name);
|
||||
input_fields[i] = field;
|
||||
}
|
||||
else
|
||||
{
|
||||
input_fields.push_back(field);
|
||||
index_map.Register(field_name, input_fields.Size() - 1);
|
||||
}
|
||||
AddField(field_name, field, own);
|
||||
}
|
||||
|
||||
void AddOutput(const std::string &field_name,
|
||||
Field *field, bool own = false)
|
||||
{
|
||||
bool has_field = fields.Has(field_name);
|
||||
bool has_index = index_map.Has(field_name);
|
||||
if(has_field && has_index)
|
||||
{
|
||||
int i = index_map.Get(field_name);
|
||||
output_fields[i] = field;
|
||||
}
|
||||
else
|
||||
{
|
||||
output_fields.push_back(field);
|
||||
index_map.Register(field_name, output_fields.Size() - 1);
|
||||
}
|
||||
|
||||
AddField(field_name, field, own);
|
||||
if(field->GetOperator() == nullptr)
|
||||
{
|
||||
field->SetOperator(oper);
|
||||
}
|
||||
}
|
||||
|
||||
Array<Field*>& InputFields() { return input_fields; }
|
||||
Array<Field*>& OutputFields() { return output_fields; }
|
||||
|
||||
Field* InputField(int i) const { return input_fields[i]; }
|
||||
Field *InputField(const std::string &field_name) const
|
||||
{
|
||||
bool has_index = index_map.Has(field_name);
|
||||
if(!has_index)
|
||||
{
|
||||
MFEM_WARNING("FieldCollection::InputField: Field with name "
|
||||
<< field_name << " does not exist in the collection.");
|
||||
return nullptr;
|
||||
}
|
||||
|
||||
int index = index_map.Get(field_name);
|
||||
MFEM_VERIFY(index >= 0 && index < input_fields.Size(),
|
||||
"FieldCollection::InputField: Invalid index for field name: "
|
||||
<< field_name << ".");
|
||||
return input_fields[index];
|
||||
}
|
||||
|
||||
Field* OutputField(int i) const { return output_fields[i]; }
|
||||
Field *OutputField(const std::string &field_name) const
|
||||
{
|
||||
bool has_index = index_map.Has(field_name);
|
||||
if(!has_index)
|
||||
{
|
||||
MFEM_WARNING("FieldCollection::OutputField: Field with name "
|
||||
<< field_name << " does not exist in the collection.");
|
||||
return nullptr;
|
||||
}
|
||||
|
||||
int index = index_map.Get(field_name);
|
||||
MFEM_VERIFY(index >= 0 && index < output_fields.Size(),
|
||||
"FieldCollection::OutputField: Invalid index for field name: "
|
||||
<< field_name << ".");
|
||||
return output_fields[index];
|
||||
}
|
||||
|
||||
FieldMap &Fields() { return fields; }
|
||||
FieldMap Fields() const { return fields; }
|
||||
|
||||
virtual void Save (std::ostream &out) const
|
||||
{
|
||||
out << "\"Fields\":\n";
|
||||
out << "{\n";
|
||||
for (auto f = fields.begin(); f != fields.end(); ++f)
|
||||
{
|
||||
std::string f_name = f->first;
|
||||
Field *f_obj = f->second;
|
||||
// out << " " << f_name << ": ID " << f_obj->ID() << ",\n";
|
||||
// out << f_obj->ID() << ": " << f_name << ",\n";
|
||||
out << '\"' << f_obj->ID() << "\": \"" << f_name << "\"";
|
||||
if(f != std::prev(fields.end())) out << ",";
|
||||
out << "\n";
|
||||
}
|
||||
out << "},\n";
|
||||
|
||||
out << "\"Inputs\":\n";
|
||||
out << "{\n";
|
||||
for (int i = 0; i < input_fields.Size(); ++i)
|
||||
{
|
||||
Field *f_obj = input_fields[i];
|
||||
out << '\"' << f_obj->ID() << "\": \"" << f_obj->Name() << "\"";
|
||||
if(i != input_fields.Size() - 1) out << ",";
|
||||
out << "\n";
|
||||
}
|
||||
out << "},\n";
|
||||
|
||||
out << "\"Outputs\":\n";
|
||||
out << "{\n";
|
||||
for (int i = 0; i < output_fields.Size(); ++i)
|
||||
{
|
||||
Field *f_obj = output_fields[i];
|
||||
out << '\"' << f_obj->ID() << "\": \"" << f_obj->Name() << "\"";
|
||||
if(i != output_fields.Size() - 1) out << ",";
|
||||
out << "\n";
|
||||
}
|
||||
out << "}\n";
|
||||
}
|
||||
|
||||
Field* HasField(const Field &field) const
|
||||
{
|
||||
for (auto f = fields.begin(); f != fields.end(); ++f)
|
||||
{
|
||||
if(f->second == &field)
|
||||
{
|
||||
return f->second;
|
||||
}
|
||||
}
|
||||
return nullptr;
|
||||
}
|
||||
|
||||
Field* HasField(const std::string &field_name) const
|
||||
{
|
||||
return fields.Get(field_name);
|
||||
}
|
||||
|
||||
Field* HasField(const int id) const
|
||||
{
|
||||
for (auto f = fields.begin(); f != fields.end(); ++f)
|
||||
{
|
||||
if(f->second->ID() == id)
|
||||
{
|
||||
return f->second;
|
||||
}
|
||||
}
|
||||
return nullptr;
|
||||
}
|
||||
|
||||
~FieldCollection(){}
|
||||
|
||||
};
|
||||
|
||||
|
||||
class GraphNode : public Operator
|
||||
{
|
||||
public:
|
||||
enum ExecutionMode
|
||||
{
|
||||
GRADIENT_MODE, ///< Node is being executed as part of a gradient evaluation
|
||||
DEFAULT_MODE ///< Node is being executed as default, operator evaluation
|
||||
};
|
||||
|
||||
private:
|
||||
inline static int next_id = 0;
|
||||
|
||||
protected:
|
||||
int id = -1;
|
||||
int node_index = -1;
|
||||
mutable ExecutionMode exec_mode = DEFAULT_MODE;
|
||||
|
||||
std::string name;
|
||||
mutable FieldCollection field_collection; ///< Collection of fields associated with this node
|
||||
|
||||
// Offsets to be used for operation on BlockVector
|
||||
Array<int> input_offsets; ///< Offsets for input fields
|
||||
Array<int> output_offsets; ///< Offsets for output fields
|
||||
|
||||
int GetValidID(int id_, int lb=0, int ub = std::numeric_limits<int>::max())
|
||||
{
|
||||
return (id_ >= lb && id_ <= ub) ? id_ : next_id++;
|
||||
}
|
||||
|
||||
public:
|
||||
|
||||
GraphNode(int h, int w) : Operator(h,w), id(GetValidID(-1)),
|
||||
name("Node_" + std::to_string(id)),
|
||||
field_collection(this) { }
|
||||
|
||||
GraphNode(int s = 0) : GraphNode(s, s) { }
|
||||
|
||||
void SetNodeIndex(int index){ node_index = index; }
|
||||
int GetNodeIndex() const { return node_index; }
|
||||
|
||||
void SetExecutionMode(ExecutionMode mode) { exec_mode = mode; }
|
||||
ExecutionMode GetExecutionMode() const { return exec_mode; }
|
||||
|
||||
void SetName(const std::string &name_) { name = name_; }
|
||||
std::string Name() const { return name; }
|
||||
|
||||
void SetID(int id_) { id = id_; }
|
||||
int ID() const { return id; }
|
||||
|
||||
FieldCollection::FieldMap& Fields() { return field_collection.Fields(); }
|
||||
Field* Fields(const std::string &f) { return field_collection.GetField(f); }
|
||||
|
||||
FieldCollection::FieldMap Fields() const { return field_collection.Fields(); }
|
||||
Field* Fields(const std::string &f) const { return field_collection.GetField(f); }
|
||||
|
||||
Array<Field*>& InputFields() const { return field_collection.InputFields(); }
|
||||
Array<Field*>& OutputFields() const { return field_collection.OutputFields(); }
|
||||
Field* InputField(int i) const { return field_collection.InputField(i); }
|
||||
Field* OutputField(int i) const { return field_collection.OutputField(i); }
|
||||
|
||||
|
||||
virtual void AddInput(const std::string &field_name,
|
||||
Field *field, bool own = false)
|
||||
{ field_collection.AddInput(field_name, field, own); }
|
||||
|
||||
virtual void AddInput(Field *field, bool own = false)
|
||||
{ AddInput(field->Name(), field, own); }
|
||||
|
||||
template<bool OwnInputs = false,
|
||||
typename... Args,
|
||||
bool AreFields = std::conjunction<std::is_base_of<Field, std::remove_pointer_t<Args>> ...>::value,
|
||||
typename std::enable_if<AreFields, bool>::type = true >
|
||||
void AddInputs(Args... args)
|
||||
{
|
||||
((AddInput(std::forward<Args>(args), OwnInputs)), ...);
|
||||
}
|
||||
|
||||
virtual void AddOutput(const std::string &field_name,
|
||||
Field *field, bool own = false)
|
||||
{ field_collection.AddOutput(field_name, field, own); }
|
||||
|
||||
virtual void AddOutput(Field *field, bool own = false)
|
||||
{ AddOutput(field->Name(), field, own); }
|
||||
|
||||
template<bool OwnOutputs = false,
|
||||
typename... Args,
|
||||
bool AreFields = std::conjunction<std::is_base_of<Field, std::remove_pointer_t<Args>> ...>::value,
|
||||
typename std::enable_if<AreFields, bool>::type = true >
|
||||
void AddOutputs(Args... args)
|
||||
{
|
||||
((AddOutput(std::forward<Args>(args), OwnOutputs)), ...);
|
||||
}
|
||||
|
||||
virtual void Save (std::ostream &out) const
|
||||
{
|
||||
out << "\"Node-" << id << "\" : " << std::endl;
|
||||
out << "{\n";
|
||||
out << "\"Name\": \"" << name << "\",\n";
|
||||
field_collection.Save(out);
|
||||
out << "}";
|
||||
}
|
||||
|
||||
virtual void Mult(const Vector &x, Vector &y) const override
|
||||
{
|
||||
MFEM_ABORT("GraphNode::Mult() not implemented");
|
||||
}
|
||||
|
||||
virtual void Mult(const MultiVector &x, MultiVector &y) override
|
||||
{
|
||||
MFEM_ABORT("GraphNode::Mult(MultiVector) not implemented");
|
||||
}
|
||||
|
||||
using Operator::GetGradient;
|
||||
|
||||
// TODO: Possibly remove this and only support MultiVector version of GradientMult
|
||||
virtual void GradientMult(const Vector &x, const Vector &dx, Vector &dy) const
|
||||
{
|
||||
MFEM_ABORT("GraphNode::GradientMult() not implemented");
|
||||
GetGradient(x).Mult(dx, dy);
|
||||
}
|
||||
|
||||
virtual void GradientMult(const MultiVector &x, const MultiVector &dx, MultiVector &dy) const
|
||||
{
|
||||
MFEM_ABORT("GraphNode::GradientMult() not implemented");
|
||||
GetGradient(x).Mult(dx, dy);
|
||||
}
|
||||
|
||||
// TODO: Possibly remove this and only support MultiVector version of GradientMultTranspose
|
||||
virtual void GradientMultTranspose(const Vector &x, const Vector &dx, Vector &dy) const
|
||||
{
|
||||
MFEM_ABORT("GraphNode::GradientMultTranspose() not implemented");
|
||||
GetGradient(x).MultTranspose(dx, dy);
|
||||
}
|
||||
|
||||
virtual void GradientMultTranspose(const MultiVector &x, const MultiVector &dx, MultiVector &dy) const
|
||||
{
|
||||
MFEM_ABORT("GraphNode::GradientMultTranspose() not implemented");
|
||||
// GetGradient(x).MultTranspose(dx, dy); // Not yet implemented
|
||||
}
|
||||
|
||||
/// @brief Return the input offsets for block starts.
|
||||
Array<int>& InputOffsets() { return input_offsets; }
|
||||
|
||||
/// @brief Read only access to the input offsets for block starts.
|
||||
const Array<int>& InputOffsets() const { return input_offsets; }
|
||||
|
||||
void SetInputOffsets(const Array<int> &offsets) { input_offsets = offsets; }
|
||||
|
||||
/// @brief Return the output offsets for block starts.
|
||||
Array<int>& OutputOffsets() { return output_offsets; }
|
||||
|
||||
/// @brief Read only access to the output offsets for block starts.
|
||||
const Array<int>& OutputOffsets() const { return output_offsets; }
|
||||
|
||||
void SetOutputOffsets(const Array<int> &offsets) { output_offsets = offsets; }
|
||||
|
||||
virtual ~GraphNode() = default;
|
||||
};
|
||||
|
||||
|
||||
/**
|
||||
@brief An abstract, type-erased class to define the interface for
|
||||
operators, not inherited from @a GraphNode. It performs SFINAE
|
||||
checks for stored operator's member functions and override the Mult
|
||||
to call the stored object's functions.
|
||||
*/
|
||||
template <typename OpType>
|
||||
class AbstractOperator : public GraphNode
|
||||
{
|
||||
protected:
|
||||
/// Define a template class 'check' to test for the existence of member functions
|
||||
template <typename C>
|
||||
class CheckMember{
|
||||
private:
|
||||
|
||||
/// @brief A type trait to check if the erased class has the function Mult
|
||||
/// with the needed signatures.
|
||||
template<class T>
|
||||
using Mult = decltype(std::declval<T&>().Mult(std::declval<const Vector&>(),
|
||||
std::declval<Vector&>()));
|
||||
|
||||
template<class T>
|
||||
using MultPtr = decltype(std::declval<T&>().Mult(std::declval<const int>(),
|
||||
std::declval<const real_t*>(),
|
||||
std::declval<const int>(),
|
||||
std::declval<real_t*>()));
|
||||
// ---------------------------------------------------------------------
|
||||
|
||||
template <typename T, template<typename> typename Func, typename R>
|
||||
static constexpr auto Check(T*) -> typename std::is_same< Func<T>, R>::type;
|
||||
|
||||
template <typename, template<typename> typename, typename >
|
||||
static constexpr std::false_type Check(...);
|
||||
|
||||
// --- Check for the existence of the member functions
|
||||
typedef decltype(Check<C,Mult,void>(0)) Has_Mult;
|
||||
typedef decltype(Check<C,MultPtr,void>(0)) Has_MultPtr;
|
||||
public:
|
||||
static constexpr bool HasMult = Has_Mult::value;
|
||||
static constexpr bool HasMultPtr = Has_MultPtr::value;
|
||||
};
|
||||
|
||||
OpType *op; ///< Pointer to the operator
|
||||
|
||||
public:
|
||||
|
||||
constexpr bool HasExecute(){return CheckMember<OpType>::HasStep;}
|
||||
constexpr bool HasMult(){return CheckMember<OpType>::HasMult;}
|
||||
|
||||
|
||||
/// @brief Constructor for the type-erased AbstractOperator class
|
||||
AbstractOperator(OpType *op_, int h, int w) : GraphNode(h,w), op(op_)
|
||||
{ }
|
||||
|
||||
/// @brief Constructor for the type-erased AbstractOperator class.
|
||||
AbstractOperator(OpType *op_, int s = 0) : AbstractOperator(op_,s,s) {}
|
||||
|
||||
/**
|
||||
@brief Perform Mult operation with the stored operator, if it exists.
|
||||
*/
|
||||
void Mult(const Vector &x, Vector &y) const override
|
||||
{
|
||||
if constexpr (CheckMember<OpType>::HasMult)
|
||||
{
|
||||
op->Mult(x,y);
|
||||
}
|
||||
else if constexpr (CheckMember<OpType>::HasMultPtr)
|
||||
{
|
||||
op->Mult(x.Size(), x.GetData(), y.Size(), y.GetData());
|
||||
}
|
||||
else
|
||||
{
|
||||
MFEM_ABORT("The AbstractOperator does not have the function, "
|
||||
"Mult(const Vector&, Vector&) or "
|
||||
"Mult(int, double*, int, double*).");
|
||||
}
|
||||
}
|
||||
};
|
||||
|
||||
|
||||
/**
|
||||
@brief A class to store and coupled multiple operators together.
|
||||
*/
|
||||
class DAGraph : public GraphNode
|
||||
{
|
||||
public:
|
||||
|
||||
using IntToIntMap = GenericFieldMap<int, int>;
|
||||
using IntToFieldMap = GenericFieldMap<int, Field*>;
|
||||
|
||||
enum class GradMode
|
||||
{
|
||||
FINITE_DIFF = 0, ///< Finite difference Jacobian
|
||||
MATRIX_FREE = 1, ///< Matrix-free Jacobian
|
||||
ASSEMBLED = 2, ///< Assembled Jacobian
|
||||
NONE = 3 ///< Not implemented
|
||||
};
|
||||
|
||||
enum InputType
|
||||
{
|
||||
VECTOR, ///< Asemble the input blockvector from individual fields
|
||||
MULTIVECTOR, ///< Asemble the multivector from individual fields
|
||||
NONE ///< No input
|
||||
};
|
||||
|
||||
protected:
|
||||
Array<GraphNode*> nodes; ///< Vector of individual operators
|
||||
Array<bool> node_owned; ///< Whether the operators are owned
|
||||
Array<int> node_depth; ///< Depth of each operator in the graph
|
||||
|
||||
int max_width = 0; ///< Largest operator width
|
||||
int max_height = 0; ///< Largest operator height
|
||||
int nnodes = 0; ///< The number of nodes
|
||||
bool sorted = false; ///< True if the nodes are topologically sorted
|
||||
bool assembled = false; ///< True if the graph is assembled
|
||||
|
||||
GradMode grad_mode = GradMode::MATRIX_FREE; ///< Gradient mode for the graph
|
||||
mutable Operator *grad = nullptr; ///< Gradient operator
|
||||
|
||||
InputType input_type = InputType::MULTIVECTOR; ///< Input type for the graph
|
||||
mutable Vector x_node, y_node; ///< Temporary vectors for evaluating nodes
|
||||
mutable MultiVector xmv_node, ymv_node; ///< Temporary multivectors for evaluating nodes
|
||||
|
||||
IntToFieldMap fid_to_field; ///< Map from Field ID to Field pointer
|
||||
IntToIntMap fid_to_index; ///< Map from ID to index in an array; needed since ordering is not unique
|
||||
|
||||
friend class GraphGradient;
|
||||
|
||||
public:
|
||||
/**
|
||||
@brief Construct a new CoupledOperator object.
|
||||
@param nop Total number of operators to couple
|
||||
*/
|
||||
DAGraph(const int nop) : GraphNode()
|
||||
{
|
||||
nodes.Reserve(nop);
|
||||
node_owned.Reserve(nop);
|
||||
}
|
||||
|
||||
/**
|
||||
@brief Construct a new CoupledOperator object for an
|
||||
abstract non/mfem operator.
|
||||
*/
|
||||
template <class OpType>
|
||||
DAGraph(const OpType &op) : DAGraph(1)
|
||||
{
|
||||
AddOperator(op);
|
||||
}
|
||||
|
||||
/**
|
||||
@brief Add an operator to the list of coupled operator and
|
||||
return pointer to it. Not owned unless it's not derived from GraphNode.
|
||||
*/
|
||||
template <class OpType>
|
||||
GraphNode* AddOperator(OpType *op_, int h, int w)
|
||||
{
|
||||
// Add operator to list of operators
|
||||
if constexpr(std::is_base_of<GraphNode, OpType>::value)
|
||||
{
|
||||
nodes.push_back(op_);
|
||||
node_owned.Append(false);
|
||||
}
|
||||
else
|
||||
{
|
||||
nodes.push_back(new AbstractOperator<OpType>(op_,h,w));
|
||||
node_owned.Append(true);
|
||||
}
|
||||
nnodes++;
|
||||
|
||||
// Update size of the coupled operator and the block offsets
|
||||
GraphNode* op = nodes.Last();
|
||||
op->SetNodeIndex(nnodes-1); // Set the index of the operator
|
||||
|
||||
int ht = op->Height();
|
||||
int wt = op->Width();
|
||||
|
||||
max_width = std::max(max_width, wt);
|
||||
max_height = std::max(max_height, ht);
|
||||
sorted = false;
|
||||
|
||||
return op;
|
||||
}
|
||||
|
||||
/// @brief Add an operator to the list of coupled operator and return pointer to it.
|
||||
template <class OpType>
|
||||
GraphNode* AddOperator(OpType *op_, int s = 0) { return AddOperator(op_,s,s);}
|
||||
|
||||
/// @brief Get the number of coupled operators
|
||||
int Size(){return nnodes;}
|
||||
|
||||
/// @brief Get the size of the largest operator
|
||||
int MaxWidth() const {return max_width;}
|
||||
int MaxHeight() const {return max_height;}
|
||||
|
||||
IntToIntMap &GetFieldIdToIndexMap() { return fid_to_index; }
|
||||
IntToIntMap GetFieldIdToIndexMap() const { return fid_to_index; }
|
||||
|
||||
IntToFieldMap &GetFieldIdToFieldMap() { return fid_to_field; }
|
||||
IntToFieldMap GetFieldIdToFieldMap() const { return fid_to_field; }
|
||||
|
||||
/// @brief Get the operator at index @a i
|
||||
GraphNode* GetNode(const int i)
|
||||
{
|
||||
MFEM_ASSERT(i >= 0 && i < nnodes,
|
||||
"index [" << i << "] is out of range [0," << nnodes << ")");
|
||||
return nodes[i];
|
||||
}
|
||||
|
||||
Array<GraphNode*>& Nodes() { return nodes; }
|
||||
|
||||
/// @brief Specify whether the operator at index @a i is owned.
|
||||
void OwnNode(const int i, bool own = true)
|
||||
{
|
||||
MFEM_ASSERT(i >= 0 && i < nnodes,
|
||||
"index [" << i << "] is out of range [0," << nnodes << ")");
|
||||
node_owned[i] = own;
|
||||
}
|
||||
|
||||
void Assemble();
|
||||
bool IsAssembled() const { return assembled; }
|
||||
|
||||
void TopologicalSort();
|
||||
bool IsSorted() const { return sorted; }
|
||||
|
||||
void ComputeDepth();
|
||||
|
||||
void ValidateOffsets();
|
||||
|
||||
void ValidateNode(GraphNode &node);
|
||||
|
||||
void CollectFieldMaps();
|
||||
|
||||
using GraphNode::AddInput;
|
||||
void AddInput(Field *field, int sz, bool own = false)
|
||||
{
|
||||
if(input_offsets.Size() == 0)
|
||||
{ // First entry
|
||||
input_offsets.Append(0);
|
||||
}
|
||||
input_offsets.Append(input_offsets.Last() + sz);
|
||||
AddInput(field, own);
|
||||
}
|
||||
|
||||
using GraphNode::AddOutput;
|
||||
void AddOutput(Field *field, int sz, bool own = false)
|
||||
{
|
||||
if(output_offsets.Size() == 0)
|
||||
{ // First entry
|
||||
output_offsets.Append(0);
|
||||
}
|
||||
output_offsets.Append(output_offsets.Last() + sz);
|
||||
AddOutput(field, own);
|
||||
}
|
||||
|
||||
/// @brief Set the gradient mode for the coupled operator
|
||||
void SetGradientMode(GradMode mode)
|
||||
{
|
||||
if(mode != grad_mode)
|
||||
{
|
||||
if(grad) { delete grad; grad = nullptr; }
|
||||
grad_mode = mode;
|
||||
}
|
||||
}
|
||||
|
||||
void SetInputType(InputType type) { input_type = type; }
|
||||
InputType GetInputType() const { return input_type; }
|
||||
|
||||
/**
|
||||
@brief Apply the operator to the vector @a x
|
||||
and return the result in @a y.
|
||||
*/
|
||||
virtual void Mult(const Vector &x, Vector &y) const override;
|
||||
|
||||
virtual void Mult(const MultiVector &x, MultiVector &y) override;
|
||||
|
||||
virtual void Execute(const MultiVector &x, MultiVector &y) const;
|
||||
|
||||
virtual void Save (std::ostream &out) const
|
||||
{
|
||||
out << "\"DAGraph\":\n";
|
||||
out << "{\n";
|
||||
// out << "\"nodes\" : " << nnodes << ",\n";
|
||||
out << "\"Nodes\":\n";
|
||||
out << "{\n";
|
||||
for (int i = 0; i < nodes.Size(); i++)
|
||||
{
|
||||
nodes[i]->Save(out);
|
||||
if(i != nodes.Size()-1) out << ",";
|
||||
out << "\n";
|
||||
}
|
||||
out << "},\n"; // End of Nodes
|
||||
field_collection.Save(out);
|
||||
out << "}\n";
|
||||
}
|
||||
|
||||
Operator& GetGradient(const Vector &x) const override;
|
||||
|
||||
/// @brief Destroy the Coupled Application object
|
||||
~DAGraph();
|
||||
};
|
||||
|
||||
|
||||
|
||||
class GraphGradient : public Operator
|
||||
{
|
||||
public:
|
||||
using InputType = DAGraph::InputType;
|
||||
|
||||
protected:
|
||||
mutable DAGraph *graph = nullptr; ///< Pointer to the DAGraph for which this is the gradient operator
|
||||
Array<Vector*> x_work; ///< Array to store linearization point (intermediate fields)
|
||||
mutable MultiVector xlin;
|
||||
mutable Vector x0, dx, dy;
|
||||
mutable MultiVector x0_mv, dx_mv, dy_mv;
|
||||
|
||||
public:
|
||||
GraphGradient(DAGraph &dag);
|
||||
|
||||
void Update(const Vector &x);
|
||||
|
||||
void Mult(const Vector &x, Vector &y) const override;
|
||||
|
||||
void Mult(const MultiVector &x, MultiVector &y) override;
|
||||
|
||||
void MultTranspose(const Vector &x, Vector &y) const override;
|
||||
|
||||
void MultTranspose(const MultiVector &x, MultiVector &y);
|
||||
|
||||
Operator &GetGradient(const Vector &x) const override;
|
||||
|
||||
void Forward(const MultiVector &x, MultiVector &y) const;
|
||||
|
||||
void Reverse(const MultiVector &x, MultiVector &y) const;
|
||||
|
||||
~GraphGradient()
|
||||
{
|
||||
for (auto &v : x_work)
|
||||
{
|
||||
if(v) { delete v; v = nullptr; }
|
||||
}
|
||||
x_work.DeleteAll();
|
||||
}
|
||||
};
|
||||
|
||||
} //mfem namespace
|
||||
|
||||
#endif
|
||||
@@ -9,6 +9,12 @@
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
add_mfem_miniapp(g_eqdsk_viewer
|
||||
MAIN g_eqdsk_viewer.cpp
|
||||
EXTRA_SOURCES g_eqdsk_data.cpp
|
||||
EXTRA_HEADERS g_eqdsk_data.hpp plasma.hpp ${MFEM_MINIAPPS_COMMON_HEADERS}
|
||||
LIBRARIES mfem mfem-common)
|
||||
|
||||
if (MFEM_USE_MPI)
|
||||
list(APPEND PLASMA_COMMON_SOURCES)
|
||||
|
||||
|
||||
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user