Compare commits
1
Commits
| Author | SHA1 | Date | |
|---|---|---|---|
|
|
c95789ba3c |
@@ -0,0 +1,61 @@
|
||||
# Configuration for probot-stale - https://github.com/probot/stale
|
||||
|
||||
# Number of days of inactivity before an Issue or Pull Request becomes stale
|
||||
daysUntilStale: 30
|
||||
|
||||
# Number of days of inactivity before an Issue or Pull Request with the stale
|
||||
# label is closed. Set to false to disable. If disabled, issues still need to
|
||||
# be closed manually, but will remain marked as stale.
|
||||
daysUntilClose: 7
|
||||
|
||||
# Only issues or pull requests with all of these labels are check if stale.
|
||||
# Defaults to `[]` (disabled)
|
||||
onlyLabels: []
|
||||
|
||||
# Issues or Pull Requests with these labels will never be considered stale. Set
|
||||
# to `[]` to disable
|
||||
exemptLabels:
|
||||
- bug
|
||||
- WIP
|
||||
- ready-for-review
|
||||
- in-review
|
||||
- in-next
|
||||
|
||||
# Set to true to ignore issues in a project (defaults to false)
|
||||
exemptProjects: false
|
||||
|
||||
# Set to true to ignore issues in a milestone (defaults to false)
|
||||
exemptMilestones: false
|
||||
|
||||
# Set to true to ignore issues with an assignee (defaults to false)
|
||||
exemptAssignees: false
|
||||
|
||||
# Label to use when marking an issue as stale
|
||||
staleLabel: stale
|
||||
|
||||
# Comment to post when marking an issue as stale. Set to `false` to disable
|
||||
markComment: >
|
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:warning: This issue or PR has been automatically marked as stale because it has not
|
||||
had any activity in the last month. *If no activity occurs in the next week, it will
|
||||
be automatically closed.* Thank you for your contributions.
|
||||
|
||||
# Comment to post when closing a stale issue. Set to `false` to disable
|
||||
closeComment: false
|
||||
|
||||
# Limit the number of actions per hour, from 1-30. Default is 30
|
||||
limitPerRun: 30
|
||||
|
||||
# Limit to only `issues` or `pulls`
|
||||
# only: issues
|
||||
|
||||
# Optionally, specify configuration settings that are specific to just 'issues' or 'pulls':
|
||||
# pulls:
|
||||
# daysUntilStale: 30
|
||||
# markComment: >
|
||||
# This pull request has been automatically marked as stale because it has not had
|
||||
# recent activity. It will be closed if no further activity occurs. Thank you
|
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# for your contributions.
|
||||
|
||||
# issues:
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# exemptLabels:
|
||||
# - confirmed
|
||||
@@ -43,7 +43,7 @@ jobs:
|
||||
remove-docker-images: 'true'
|
||||
|
||||
- name: Checkout
|
||||
uses: actions/checkout@v4
|
||||
uses: actions/checkout@v3
|
||||
|
||||
# It's easier to reference named variables than indexes of the matrix
|
||||
- name: Set Environment
|
||||
@@ -65,7 +65,7 @@ jobs:
|
||||
|
||||
- name: GHCR Login
|
||||
if: (github.event_name != 'pull_request')
|
||||
uses: docker/login-action@v3
|
||||
uses: docker/login-action@v2
|
||||
with:
|
||||
registry: ghcr.io
|
||||
username: ${{ github.actor }}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -29,15 +29,10 @@ on:
|
||||
pull_request:
|
||||
workflow_dispatch:
|
||||
|
||||
concurrency:
|
||||
group: ${{ github.workflow }}-${{ github.ref }}
|
||||
cancel-in-progress: true
|
||||
|
||||
env:
|
||||
HYPRE_ARCHIVE: v2.19.0.tar.gz
|
||||
HYPRE_TOP_DIR: hypre-2.19.0
|
||||
METIS_ARCHIVE: metis-4.0.3.tar.gz
|
||||
METIS_ARCHIVE_MAC: metis-4.0.3-mac.tgz
|
||||
METIS_TOP_DIR: metis-4.0.3
|
||||
MFEM_TOP_DIR: mfem
|
||||
|
||||
@@ -57,7 +52,6 @@ jobs:
|
||||
mpi: [seq, par]
|
||||
build-system: [make, cmake]
|
||||
hypre-target: [int32]
|
||||
precision: [fp64]
|
||||
exclude:
|
||||
- os: ubuntu-latest
|
||||
build-system: cmake
|
||||
@@ -81,8 +75,6 @@ jobs:
|
||||
- os: ubuntu-latest
|
||||
target: dbg
|
||||
config-opts: 'CPPFLAGS+=-Og'
|
||||
- os: macos-latest
|
||||
codecov: NO
|
||||
- os: windows-latest
|
||||
codecov: NO
|
||||
- os: windows-latest
|
||||
@@ -95,8 +87,6 @@ jobs:
|
||||
mpi: par
|
||||
build-system: cmake
|
||||
hypre-target: int32
|
||||
precision: fp64
|
||||
config-opts: '-DCMAKE_INSTALL_PREFIX=../cmake-install'
|
||||
# This option can be set to pass additional configuration options to
|
||||
# the MFEM configuration command.
|
||||
# config-opts: '-DCMAKE_VERBOSE_MAKEFILE=ON'
|
||||
@@ -106,26 +96,18 @@ jobs:
|
||||
mpi: par
|
||||
build-system: make
|
||||
hypre-target: int64
|
||||
precision: fp64
|
||||
- os: ubuntu-latest
|
||||
target: opt
|
||||
codecov: NO
|
||||
mpi: par
|
||||
build-system: make
|
||||
hypre-target: int32
|
||||
precision: fp32
|
||||
- os: macos-latest
|
||||
target: opt
|
||||
codecov: NO
|
||||
mpi: par
|
||||
build-system: make
|
||||
hypre-target: int32
|
||||
precision: fp32
|
||||
name: ${{ matrix.os }}-${{ matrix.build-system }}-${{ matrix.target }}-${{ matrix.mpi }}-${{ matrix.hypre-target }}-${{ matrix.precision }}
|
||||
name: ${{ matrix.os }}-${{ matrix.build-system }}-${{ matrix.target }}-${{ matrix.mpi }}-${{ matrix.hypre-target }}
|
||||
|
||||
runs-on: ${{ matrix.os }}
|
||||
|
||||
steps:
|
||||
# This external action allows to interrupt a workflow already running on
|
||||
# the same branch to save resources.
|
||||
- name: Cancel Previous Runs
|
||||
uses: styfle/cancel-workflow-action@0.11.0
|
||||
with:
|
||||
access_token: ${{ github.token }}
|
||||
|
||||
# Fix 'No space left on device' errors for Ubuntu builds.
|
||||
- name: Run Actions Cleaner
|
||||
if: matrix.os == 'ubuntu-latest'
|
||||
@@ -138,31 +120,19 @@ jobs:
|
||||
# /home/runner/work/mfem/mfem/mfem
|
||||
# Note: Done now to access "install-hypre" and "install-metis" actions.
|
||||
- name: checkout mfem
|
||||
uses: actions/checkout@v4
|
||||
uses: actions/checkout@v3
|
||||
with:
|
||||
path: ${{ env.MFEM_TOP_DIR }}
|
||||
# Fetch the complete history for codecov to access commits ID
|
||||
fetch-depth: 0
|
||||
|
||||
- name: Xcode version setup (MacOS)
|
||||
if: matrix.os == 'macos-latest'
|
||||
run: |
|
||||
XCODE_PATH="/Applications/Xcode_15.3.app"
|
||||
echo "> sudo xcode-select -s ${XCODE_PATH}"
|
||||
sudo xcode-select -s ${XCODE_PATH}
|
||||
echo "> g++ -v"
|
||||
g++ -v
|
||||
echo "> clang++ -v"
|
||||
clang++ -v
|
||||
|
||||
# Only get MPI if defined for the job.
|
||||
# TODO: It would be nice to have only one step, e.g. with a dedicated
|
||||
# action, but I (@adrienbernede) don't see how at the moment.
|
||||
- name: get MPI (Linux)
|
||||
if: matrix.mpi == 'par' && matrix.os == 'ubuntu-latest'
|
||||
run: |
|
||||
sudo apt-get install openmpi-bin libopenmpi-dev
|
||||
export OMPI_MCA_rmaps_base_oversubscribe=1
|
||||
sudo apt-get install mpich libmpich-dev
|
||||
|
||||
- name: get lcov (Linux)
|
||||
if: matrix.codecov == 'YES' && matrix.os == 'ubuntu-latest'
|
||||
@@ -196,52 +166,50 @@ jobs:
|
||||
- name: cache hypre
|
||||
id: hypre-cache
|
||||
if: matrix.mpi == 'par'
|
||||
uses: actions/cache@v4
|
||||
uses: actions/cache@v3
|
||||
with:
|
||||
path: ${{ env.HYPRE_TOP_DIR }}
|
||||
key: ${{ runner.os }}-ompi-build-${{ env.HYPRE_TOP_DIR }}-${{ matrix.hypre-target }}-${{ matrix.precision }}-v2.5
|
||||
key: ${{ runner.os }}-build-${{ env.HYPRE_TOP_DIR }}-${{ matrix.hypre-target }}-v2.2
|
||||
|
||||
- name: get hypre
|
||||
if: matrix.mpi == 'par' && steps.hypre-cache.outputs.cache-hit != 'true' && matrix.os != 'windows-latest'
|
||||
uses: mfem/github-actions/build-hypre@v2.5
|
||||
uses: mfem/github-actions/build-hypre@v2.4
|
||||
with:
|
||||
archive: ${{ env.HYPRE_ARCHIVE }}
|
||||
dir: ${{ env.HYPRE_TOP_DIR }}
|
||||
target: ${{ matrix.hypre-target }}
|
||||
build-system: make
|
||||
precision: ${{ matrix.precision }}
|
||||
|
||||
- name: get hypre (Windows)
|
||||
if: matrix.mpi == 'par' && steps.hypre-cache.outputs.cache-hit != 'true' && matrix.os == 'windows-latest'
|
||||
uses: mfem/github-actions/build-hypre@v2.5
|
||||
uses: mfem/github-actions/build-hypre@v2.4
|
||||
with:
|
||||
archive: ${{ env.HYPRE_ARCHIVE }}
|
||||
dir: ${{ env.HYPRE_TOP_DIR }}
|
||||
target: ${{ matrix.hypre-target }}
|
||||
build-system: cmake
|
||||
precision: ${{ matrix.precision }}
|
||||
|
||||
# Get Metis through cache, or build it.
|
||||
# Install will only run on cache miss.
|
||||
- name: cache metis
|
||||
id: metis-cache
|
||||
if: matrix.mpi == 'par' && matrix.os != 'windows-latest'
|
||||
uses: actions/cache@v4
|
||||
uses: actions/cache@v3
|
||||
with:
|
||||
path: ${{ env.METIS_TOP_DIR }}
|
||||
key: ${{ runner.os }}-build-${{ env.METIS_TOP_DIR }}-v2.5
|
||||
key: ${{ runner.os }}-build-${{ env.METIS_TOP_DIR }}-v2.2
|
||||
|
||||
- name: install metis
|
||||
if: matrix.mpi == 'par' && matrix.os != 'windows-latest' && steps.metis-cache.outputs.cache-hit != 'true'
|
||||
uses: mfem/github-actions/build-metis@v2.5
|
||||
uses: mfem/github-actions/build-metis@v2.4
|
||||
with:
|
||||
archive: ${{ matrix.os != 'macos-latest' && env.METIS_ARCHIVE || env.METIS_ARCHIVE_MAC }}
|
||||
archive: ${{ env.METIS_ARCHIVE }}
|
||||
dir: ${{ env.METIS_TOP_DIR }}
|
||||
|
||||
- name: cache vcpkg (Windows)
|
||||
id: vcpkg-cache
|
||||
if: matrix.os == 'windows-latest'
|
||||
uses: actions/cache@v4
|
||||
uses: actions/cache@v3
|
||||
with:
|
||||
path: vcpkg_cache
|
||||
key: ${{ runner.os }}-${{ matrix.mpi }}-vcpkg-v1
|
||||
@@ -260,7 +228,7 @@ jobs:
|
||||
|
||||
# MFEM build and test
|
||||
- name: build
|
||||
uses: mfem/github-actions/build-mfem@v2.5
|
||||
uses: mfem/github-actions/build-mfem@v2.4
|
||||
env:
|
||||
VCPKG_DEFAULT_BINARY_CACHE: ${{ github.workspace }}/vcpkg_cache
|
||||
with:
|
||||
@@ -272,7 +240,6 @@ jobs:
|
||||
hypre-dir: ${{ env.HYPRE_TOP_DIR }}
|
||||
metis-dir: ${{ env.METIS_TOP_DIR }}
|
||||
mfem-dir: ${{ env.MFEM_TOP_DIR }}
|
||||
precision: ${{ matrix.precision }}
|
||||
config-options: ${{ matrix.config-opts }}
|
||||
library-only: ${{ matrix.target == 'dbg' && matrix.os != 'ubuntu-latest' }}
|
||||
|
||||
@@ -312,26 +279,10 @@ jobs:
|
||||
ctest --rerun-failed --output-on-failure -C ${CTEST_CONFIG}
|
||||
shell: bash
|
||||
|
||||
- name: make install
|
||||
if: matrix.build-system == 'make'
|
||||
run: |
|
||||
cd ${{ env.MFEM_TOP_DIR }} && make install
|
||||
|
||||
- name: cmake install
|
||||
if: matrix.build-system == 'cmake'
|
||||
run: |
|
||||
CONFIG="Release"
|
||||
[[ ${{ matrix.target }} == 'dbg' ]] && CONFIG="Debug"
|
||||
TARGET="install"
|
||||
[[ ${{ matrix.os }} == 'windows-latest' ]] && TARGET="INSTALL"
|
||||
cd ${{ env.MFEM_TOP_DIR }} && \
|
||||
cmake --build build --target ${TARGET} --config ${CONFIG}
|
||||
shell: bash
|
||||
|
||||
# Code coverage (process and upload reports)
|
||||
- name: codecov
|
||||
if: matrix.codecov == 'YES'
|
||||
uses: mfem/github-actions/upload-coverage@v2.5
|
||||
uses: mfem/github-actions/upload-coverage@v2.4
|
||||
with:
|
||||
name: ${{ matrix.os }}-${{ matrix.build-system }}-${{ matrix.target }}-${{ matrix.mpi }}-${{ matrix.hypre-target }}
|
||||
project_dir: ${{ env.MFEM_TOP_DIR }}
|
||||
|
||||
@@ -18,10 +18,6 @@ on:
|
||||
# The branches below must be a subset of the branches above
|
||||
branches: ["master"]
|
||||
|
||||
concurrency:
|
||||
group: ${{ github.workflow }}-${{ github.ref }}
|
||||
cancel-in-progress: true
|
||||
|
||||
jobs:
|
||||
analyze:
|
||||
name: Analyze
|
||||
@@ -40,7 +36,7 @@ jobs:
|
||||
|
||||
steps:
|
||||
- name: Checkout repository
|
||||
uses: actions/checkout@v4
|
||||
uses: actions/checkout@v3
|
||||
|
||||
# Initializes the CodeQL tools for scanning.
|
||||
- name: Initialize CodeQL
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -22,10 +22,6 @@ on:
|
||||
pull_request:
|
||||
workflow_dispatch:
|
||||
|
||||
concurrency:
|
||||
group: ${{ github.workflow }}-${{ github.ref }}
|
||||
cancel-in-progress: true
|
||||
|
||||
env:
|
||||
HYPRE_ARCHIVE: v2.19.0.tar.gz
|
||||
HYPRE_TOP_DIR: hypre-2.19.0
|
||||
@@ -38,26 +34,30 @@ jobs:
|
||||
runs-on: ubuntu-latest
|
||||
|
||||
steps:
|
||||
- name: Cancel Previous Runs
|
||||
uses: styfle/cancel-workflow-action@0.11.0
|
||||
with:
|
||||
access_token: ${{ github.token }}
|
||||
|
||||
- name: checkout MFEM
|
||||
uses: actions/checkout@v4
|
||||
uses: actions/checkout@v3
|
||||
with:
|
||||
path: mfem
|
||||
|
||||
- name: Get MPI (Linux)
|
||||
run: |
|
||||
sudo apt-get install openmpi-bin libopenmpi-dev
|
||||
export OMPI_MCA_rmaps_base_oversubscribe=1
|
||||
sudo apt-get install mpich libmpich-dev
|
||||
|
||||
- name: Cache Hypre Install
|
||||
id: hypre-cache
|
||||
uses: actions/cache@v4
|
||||
uses: actions/cache@v3
|
||||
with:
|
||||
path: ${{ env.HYPRE_TOP_DIR }}
|
||||
key: ${{ runner.os }}-ompi-build-${{ env.HYPRE_TOP_DIR }}-v2.5
|
||||
key: ${{ runner.os }}-build-${{ env.HYPRE_TOP_DIR }}-v2.2
|
||||
|
||||
- name: Get Hypre
|
||||
if: steps.hypre-cache.outputs.cache-hit != 'true'
|
||||
uses: mfem/github-actions/build-hypre@v2.5
|
||||
uses: mfem/github-actions/build-hypre@v2.4
|
||||
with:
|
||||
archive: ${{ env.HYPRE_ARCHIVE }}
|
||||
dir: ${{ env.HYPRE_TOP_DIR }}
|
||||
@@ -65,21 +65,21 @@ jobs:
|
||||
|
||||
- name: Cache Metis Install
|
||||
id: metis-cache
|
||||
uses: actions/cache@v4
|
||||
uses: actions/cache@v3
|
||||
with:
|
||||
path: ${{ env.METIS_TOP_DIR }}
|
||||
key: ${{ runner.os }}-build-${{ env.METIS_TOP_DIR }}-v2.5
|
||||
key: ${{ runner.os }}-build-${{ env.METIS_TOP_DIR }}-v2.2
|
||||
|
||||
- name: Install Metis
|
||||
if: steps.metis-cache.outputs.cache-hit != 'true'
|
||||
uses: mfem/github-actions/build-metis@v2.5
|
||||
uses: mfem/github-actions/build-metis@v2.4
|
||||
with:
|
||||
archive: ${{ env.METIS_ARCHIVE }}
|
||||
dir: ${{ env.METIS_TOP_DIR }}
|
||||
|
||||
# MFEM build and test
|
||||
- name: build-mfem
|
||||
uses: mfem/github-actions/build-mfem@v2.5
|
||||
uses: mfem/github-actions/build-mfem@v2.4
|
||||
with:
|
||||
os: ${{ runner.os }}
|
||||
target: opt
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -22,22 +22,23 @@ on:
|
||||
pull_request:
|
||||
workflow_dispatch:
|
||||
|
||||
concurrency:
|
||||
group: ${{ github.workflow }}-${{ github.ref }}
|
||||
cancel-in-progress: true
|
||||
|
||||
jobs:
|
||||
Serial:
|
||||
runs-on: ubuntu-24.04
|
||||
runs-on: ubuntu-latest
|
||||
|
||||
steps:
|
||||
- name: Cancel Previous Runs
|
||||
uses: styfle/cancel-workflow-action@0.11.0
|
||||
with:
|
||||
access_token: ${{ github.token }}
|
||||
|
||||
- name: MFEM Checkout
|
||||
uses: actions/checkout@v4
|
||||
uses: actions/checkout@v3
|
||||
with:
|
||||
path: mfem
|
||||
|
||||
- name: MFEM Build
|
||||
uses: mfem/github-actions/build-mfem@v2.5
|
||||
uses: mfem/github-actions/build-mfem@v2.4
|
||||
with:
|
||||
os: ${{ runner.os }}
|
||||
target: opt
|
||||
@@ -48,7 +49,7 @@ jobs:
|
||||
build-system: make
|
||||
library-only: false
|
||||
config-options:
|
||||
CXX="clang++-18"
|
||||
CXX="clang++-14"
|
||||
CXXFLAGS="-g -O1 -std=c++11
|
||||
-fsanitize=address
|
||||
-fno-omit-frame-pointer
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -19,10 +19,6 @@ on:
|
||||
pull_request:
|
||||
workflow_dispatch:
|
||||
|
||||
concurrency:
|
||||
group: ${{ github.workflow }}-${{ github.ref }}
|
||||
cancel-in-progress: true
|
||||
|
||||
# This workflow is run on pushes to any branch in the MFEM repo (with or without
|
||||
# PRs), as well as on updates to PRs from forks. In particular, we do not
|
||||
# duplicate work by running on both pushes and updates to local PRs. We do that
|
||||
@@ -37,8 +33,13 @@ jobs:
|
||||
(github.event_name == 'push' ||
|
||||
github.event.pull_request.head.repo.full_name != github.repository)
|
||||
steps:
|
||||
- name: Cancel Previous Runs
|
||||
uses: styfle/cancel-workflow-action@0.11.0
|
||||
with:
|
||||
access_token: ${{ github.token }}
|
||||
|
||||
- name: checkout mfem
|
||||
uses: actions/checkout@v4
|
||||
uses: actions/checkout@v3
|
||||
|
||||
- name: copyright check
|
||||
id: copyright
|
||||
@@ -59,18 +60,11 @@ jobs:
|
||||
./config/githooks/pre-push --release
|
||||
continue-on-error: true
|
||||
|
||||
- name: math check
|
||||
id: math
|
||||
run: |
|
||||
./config/githooks/pre-push --math
|
||||
continue-on-error: true
|
||||
|
||||
- name: wrap-up
|
||||
if: |
|
||||
steps.copyright.outcome != 'success' ||
|
||||
steps.license.outcome != 'success' ||
|
||||
steps.release.outcome != 'success' ||
|
||||
steps.math.outcome != 'success'
|
||||
steps.release.outcome != 'success'
|
||||
run: |
|
||||
if [[ "${{ steps.copyright.outcome }}" != "success" ]]; then
|
||||
echo "copyright check failed, unroll log for details"
|
||||
@@ -81,9 +75,6 @@ jobs:
|
||||
if [[ "${{ steps.release.outcome }}" != "success" ]]; then
|
||||
echo "release check failed, unroll log for details"
|
||||
fi
|
||||
if [[ "${{ steps.math.outcome }}" != "success" ]]; then
|
||||
echo "math check failed, unroll log for details"
|
||||
fi
|
||||
exit 1
|
||||
|
||||
code-style:
|
||||
@@ -93,7 +84,7 @@ jobs:
|
||||
github.event.pull_request.head.repo.full_name != github.repository)
|
||||
steps:
|
||||
- name: checkout mfem
|
||||
uses: actions/checkout@v4
|
||||
uses: actions/checkout@v3
|
||||
|
||||
- name: get astyle
|
||||
run: |
|
||||
@@ -110,7 +101,7 @@ jobs:
|
||||
github.event.pull_request.head.repo.full_name != github.repository)
|
||||
steps:
|
||||
- name: checkout mfem
|
||||
uses: actions/checkout@v4
|
||||
uses: actions/checkout@v3
|
||||
|
||||
- name: get doxygen and graphviz
|
||||
run: |
|
||||
@@ -135,7 +126,7 @@ jobs:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- name: checkout mfem
|
||||
uses: actions/checkout@v4
|
||||
uses: actions/checkout@v3
|
||||
with:
|
||||
fetch-depth: 0
|
||||
|
||||
|
||||
@@ -1,31 +0,0 @@
|
||||
# This workflow warns and then closes issues and PRs that have had no activity for a specified amount of time.
|
||||
# For more information, see: https://github.com/actions/stale
|
||||
name: Mark stale issues and pull requests
|
||||
|
||||
on:
|
||||
workflow_dispatch:
|
||||
schedule:
|
||||
- cron: '0 0 * * *'
|
||||
|
||||
jobs:
|
||||
stale:
|
||||
|
||||
runs-on: ubuntu-latest
|
||||
permissions:
|
||||
issues: write
|
||||
pull-requests: write
|
||||
actions: write
|
||||
|
||||
steps:
|
||||
- uses: actions/stale@v9
|
||||
with:
|
||||
repo-token: ${{ secrets.GITHUB_TOKEN }}
|
||||
stale-issue-message: ':warning: This issue has been automatically marked as stale because it has not had any activity in the last month. *If no activity occurs in the next week, it will be automatically closed.* Thank you for your contributions.'
|
||||
stale-pr-message: ':warning: This PR has been automatically marked as stale because it has not had any activity in the last month. *If no activity occurs in the next week, it will be automatically closed.* Thank you for your contributions.'
|
||||
days-before-stale: 30
|
||||
days-before-close: 7
|
||||
stale-issue-label: 'stale'
|
||||
stale-pr-label: 'stale'
|
||||
operations-per-run: 500
|
||||
exempt-issue-labels: "bug,WIP,ready-for-review,in-review,in-next"
|
||||
exempt-pr-labels: "bug,WIP,ready-for-review,in-review,in-next"
|
||||
@@ -1,31 +0,0 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
# This file is part of the MFEM library. For more information and source code
|
||||
# availability visit https://mfem.org.
|
||||
#
|
||||
# MFEM is free software; you can redistribute it and/or modify it under the
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
name: "Trigger PyMFEM CI"
|
||||
|
||||
on:
|
||||
push:
|
||||
branches:
|
||||
- master
|
||||
|
||||
jobs:
|
||||
trigger-pymfem:
|
||||
runs-on: ubuntu-latest
|
||||
steps:
|
||||
- name: Send POST request to trigger PyMFEM CI
|
||||
run: |
|
||||
curl -L \
|
||||
-X POST \
|
||||
-H "Accept: application/vnd.github+json" \
|
||||
-H "Authorization: Bearer ${{ secrets.PYMFEM_CI_TOKEN }}" \
|
||||
-H "X-GitHub-Api-Version: 2022-11-28" \
|
||||
https://api.github.com/repos/mfem/pymfem/actions/workflows/build-and-test-dispatch.yml/dispatches \
|
||||
-d '{"ref":"master", "inputs":{"test_options":"fast"}}'
|
||||
+6
-54
@@ -8,7 +8,6 @@
|
||||
|
||||
# Object and library files
|
||||
*.o
|
||||
*.o.tmp
|
||||
/libmfem.*
|
||||
/miniapps/common/libmfem-common.*
|
||||
|
||||
@@ -16,9 +15,6 @@
|
||||
CMakeCache.txt
|
||||
CMakeFiles/
|
||||
|
||||
# Clangd server cache
|
||||
*.cache*
|
||||
|
||||
# Backup files
|
||||
*~
|
||||
|
||||
@@ -61,8 +57,6 @@ examples/ex2[0-9]
|
||||
examples/ex2[0-9]p
|
||||
examples/ex3[0-9]
|
||||
examples/ex3[0-9]p
|
||||
examples/ex4[0-9]
|
||||
examples/ex4[0-9]p
|
||||
|
||||
examples/refined.mesh
|
||||
examples/displaced.mesh
|
||||
@@ -80,7 +74,6 @@ examples/sol_p.*
|
||||
examples/sol_r.*
|
||||
examples/sol_i.*
|
||||
examples/ex6p-checkpoint.*
|
||||
examples/order.*
|
||||
examples/ex9.mesh
|
||||
examples/ex9-mesh.*
|
||||
examples/ex9-init.*
|
||||
@@ -98,6 +91,10 @@ examples/ex16.mesh
|
||||
examples/ex16-mesh.*
|
||||
examples/ex16-init.*
|
||||
examples/ex16-final.*
|
||||
examples/vortex-mesh.*
|
||||
examples/vortex.mesh
|
||||
examples/vortex-?-init.*
|
||||
examples/vortex-?-final.*
|
||||
examples/deformation.*
|
||||
examples/pressure.*
|
||||
examples/ex20.dat
|
||||
@@ -123,8 +120,6 @@ examples/cond_mesh.*
|
||||
examples/port_mesh.*
|
||||
examples/port_mode.*
|
||||
|
||||
examples/euler-*
|
||||
|
||||
examples/amgx/ex1
|
||||
examples/amgx/ex1p
|
||||
examples/amgx/.logamgx
|
||||
@@ -133,13 +128,6 @@ examples/amgx/sol.gf
|
||||
examples/amgx/mesh.*
|
||||
examples/amgx/sol.*
|
||||
|
||||
examples/caliper/ex1
|
||||
examples/caliper/ex1p
|
||||
examples/caliper/refined.mesh
|
||||
examples/caliper/sol.gf
|
||||
examples/caliper/mesh.*
|
||||
examples/caliper/sol.*
|
||||
|
||||
examples/ginkgo/ex1
|
||||
examples/ginkgo/refined.mesh
|
||||
examples/ginkgo/sol.gf
|
||||
@@ -228,7 +216,6 @@ miniapps/meshing/extruder
|
||||
miniapps/meshing/fit-node-position
|
||||
miniapps/meshing/trimmer
|
||||
miniapps/meshing/reflector
|
||||
miniapps/meshing/ref321
|
||||
miniapps/meshing/mesh-optimizer
|
||||
miniapps/meshing/pmesh-optimizer
|
||||
miniapps/meshing/pmesh-fitting
|
||||
@@ -236,13 +223,11 @@ miniapps/meshing/minimal-surface
|
||||
miniapps/meshing/pminimal-surface
|
||||
miniapps/meshing/polar-nc
|
||||
miniapps/meshing/mesh-quality
|
||||
miniapps/meshing/hpref
|
||||
miniapps/meshing/phpref
|
||||
miniapps/meshing/mobius-strip.mesh
|
||||
miniapps/meshing/klein-bottle.mesh
|
||||
miniapps/meshing/toroid-*.mesh
|
||||
miniapps/meshing/twist-*.mesh
|
||||
miniapps/meshing/mesh-explorer.mesh*
|
||||
miniapps/meshing/mesh-explorer.mesh
|
||||
miniapps/meshing/partitioning.txt
|
||||
miniapps/meshing/mesh-explorer-visit*
|
||||
miniapps/meshing/mesh-explorer-paraview/
|
||||
@@ -250,15 +235,9 @@ miniapps/meshing/shaper.mesh
|
||||
miniapps/meshing/extruder.mesh
|
||||
miniapps/meshing/trimmer.mesh
|
||||
miniapps/meshing/reflected.mesh
|
||||
miniapps/meshing/ref321.mesh
|
||||
miniapps/meshing/sol.gf
|
||||
miniapps/meshing/optimized*
|
||||
miniapps/meshing/perturbed*
|
||||
miniapps/meshing/polar-nc.mesh
|
||||
miniapps/meshing/mesh.*
|
||||
miniapps/meshing/order.*
|
||||
miniapps/meshing/sol.*
|
||||
miniapps/meshing/refined.mesh
|
||||
|
||||
miniapps/mtop/parheat
|
||||
miniapps/mtop/ParHeat*
|
||||
@@ -286,32 +265,17 @@ miniapps/navier/*_output
|
||||
|
||||
miniapps/nurbs/nurbs_ex1
|
||||
miniapps/nurbs/nurbs_ex1p
|
||||
miniapps/nurbs/nurbs_ex3
|
||||
miniapps/nurbs/nurbs_ex5
|
||||
miniapps/nurbs/nurbs_ex11p
|
||||
miniapps/nurbs/nurbs_ex24
|
||||
miniapps/nurbs/nurbs_solenoidal
|
||||
miniapps/nurbs/nurbs_printfunc
|
||||
miniapps/nurbs/nurbs_patch_ex1
|
||||
miniapps/nurbs/nurbs_curveint
|
||||
miniapps/nurbs/refined.mesh
|
||||
miniapps/nurbs/mesh.*
|
||||
miniapps/nurbs/sol_?.gf
|
||||
miniapps/nurbs/sol.*
|
||||
miniapps/nurbs/mode_*
|
||||
miniapps/nurbs/Example1*
|
||||
miniapps/nurbs/Example3*
|
||||
miniapps/nurbs/Example5*
|
||||
miniapps/nurbs/Solenoidal*
|
||||
miniapps/nurbs/ParaView
|
||||
miniapps/nurbs/sin-fit.mesh
|
||||
miniapps/nurbs/ex5.mesh
|
||||
miniapps/nurbs/exsol.mesh
|
||||
miniapps/nurbs/CurveInt
|
||||
miniapps/nurbs/nurbs_naca_cmesh
|
||||
miniapps/nurbs/naca-cmesh.mesh
|
||||
miniapps/nurbs/glvis_naca-cmesh.mesh
|
||||
miniapps/nurbs/Naca_cmesh
|
||||
|
||||
miniapps/performance/ex1
|
||||
miniapps/performance/ex1p
|
||||
@@ -336,7 +300,7 @@ miniapps/tools/convert-dc
|
||||
miniapps/tools/lor-transfer
|
||||
miniapps/tools/plor-transfer
|
||||
miniapps/tools/get-values
|
||||
miniapps/tools/tmop-check-metric
|
||||
miniapps/tools/check-tmop-metric
|
||||
miniapps/tools/tmop-metric-magnitude
|
||||
miniapps/tools/nodal-transfer
|
||||
miniapps/tools/ParaView
|
||||
@@ -350,7 +314,6 @@ miniapps/toys/rubik
|
||||
miniapps/toys/snake
|
||||
miniapps/toys/lissajous
|
||||
miniapps/toys/mondrian
|
||||
miniapps/toys/spiral
|
||||
miniapps/toys/snake-init.mesh
|
||||
miniapps/toys/snake-user.mesh
|
||||
miniapps/toys/snake-joined.mesh
|
||||
@@ -368,7 +331,6 @@ miniapps/toys/mondrian.mesh
|
||||
miniapps/solvers/block-solvers
|
||||
miniapps/solvers/lor_solvers
|
||||
miniapps/solvers/plor_solvers
|
||||
miniapps/solvers/lor_elast
|
||||
miniapps/solvers/ParaView
|
||||
miniapps/solvers/mesh.*
|
||||
miniapps/solvers/sol.*
|
||||
@@ -380,8 +342,6 @@ miniapps/parelag/MultilevelHcurlHdivSolver
|
||||
miniapps/parelag/*.mesh
|
||||
|
||||
miniapps/multidomain/multidomain
|
||||
miniapps/multidomain/multidomain_nd
|
||||
miniapps/multidomain/multidomain_rt
|
||||
miniapps/hooke/hooke
|
||||
|
||||
miniapps/dpg/diffusion
|
||||
@@ -397,8 +357,6 @@ miniapps/dpg/ParaView
|
||||
miniapps/spde/generate_random_field
|
||||
miniapps/spde/ParaView
|
||||
|
||||
miniapps/tribol/contact-patch-test
|
||||
|
||||
# Unit test binary and outputs
|
||||
tests/unit/output_meshes
|
||||
tests/unit/unit_tests
|
||||
@@ -439,9 +397,3 @@ pkg.gitcommit
|
||||
|
||||
# Jupyter Notebook Checkpoints
|
||||
.ipynb_checkpoints
|
||||
|
||||
# emacs tag file
|
||||
TAGS
|
||||
|
||||
# vs code
|
||||
.vscode
|
||||
|
||||
+6
-9
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -13,16 +13,13 @@
|
||||
# at Lawrence Livermore National Laboratory (LLNL). This entire pipeline is
|
||||
# LLNL-specific!
|
||||
|
||||
include:
|
||||
- project: 'lc-templates/id_tokens'
|
||||
file: 'id_tokens.yml'
|
||||
|
||||
# The pipeline is divided into stages. Usually, jobs in a given stage wait for
|
||||
# the preceding stages to complete before to start. However, we sometimes use
|
||||
# the "needs" keyword and express the DAG of jobs for more efficiency.
|
||||
# - We use setup and setup_baseline phases to download content outside of mfem
|
||||
# directory.
|
||||
# - Allocate/Release is where ruby resource are allocated/released once for all.
|
||||
# - Allocate/Release is where quartz resource are allocated/released once for all.
|
||||
# - Build and Test is where we build and MFEM for multiple toolchains.
|
||||
# - Baseline_checks gathers baseline-type test suites execution
|
||||
# - Baseline_publish, only available on master, allows to update baseline
|
||||
@@ -53,7 +50,7 @@ variables:
|
||||
AUTOTEST_COMMIT: "YES"
|
||||
|
||||
# Trigger subpipelines:
|
||||
ruby-build-and-test:
|
||||
quartz-build-and-test:
|
||||
stage: sub-pipelines
|
||||
variables:
|
||||
# Explicitly pass down values that we want to be able to set when triggering
|
||||
@@ -61,10 +58,10 @@ ruby-build-and-test:
|
||||
AUTOTEST: "${AUTOTEST}"
|
||||
AUTOTEST_COMMIT: "${AUTOTEST_COMMIT}"
|
||||
trigger:
|
||||
include: .gitlab/ruby-build-and-test.yml
|
||||
include: .gitlab/quartz-build-and-test.yml
|
||||
strategy: depend
|
||||
|
||||
ruby-baseline:
|
||||
quartz-baseline:
|
||||
stage: sub-pipelines
|
||||
variables:
|
||||
# Explicitly pass down values that we want to be able to set when triggering
|
||||
@@ -73,7 +70,7 @@ ruby-baseline:
|
||||
AUTOTEST: "${AUTOTEST}"
|
||||
AUTOTEST_COMMIT: "${AUTOTEST_COMMIT}"
|
||||
trigger:
|
||||
include: .gitlab/ruby-baseline.yml
|
||||
include: .gitlab/quartz-baseline.yml
|
||||
strategy: depend
|
||||
|
||||
lassen-build-and-test:
|
||||
|
||||
+3
-3
@@ -24,7 +24,7 @@ and `test type`.
|
||||
|
||||
Machines typically include:
|
||||
|
||||
* Ruby: 2nd Gen Intel Xeon (Cascade Lake)
|
||||
* Quartz: Intel bi-socket x86
|
||||
* Lassen: Power9 + Nvidia GPU
|
||||
* Corona: AMD GPU
|
||||
|
||||
@@ -76,13 +76,13 @@ with a spack spec of MFEM, within the limits permitted by the MFEM spack
|
||||
package.
|
||||
|
||||
In any build-and-test sub-pipeline a job basically consists in defining the
|
||||
spack spec to use. Adding a job on ruby for example resumes to:
|
||||
spack spec to use. Adding a job on quartz for example resumes to:
|
||||
|
||||
```yaml
|
||||
<job_name>:
|
||||
variables:
|
||||
SPEC: "<spack_spec>"
|
||||
extends: .build_and_test_on_ruby
|
||||
extends: .build_and_test_on_quartz
|
||||
```
|
||||
|
||||
The remaining and non trivial work is to make sure this spec is working. To
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -9,10 +9,6 @@
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
include:
|
||||
- project: 'lc-templates/id_tokens'
|
||||
file: 'id_tokens.yml'
|
||||
|
||||
# We define the following GitLab pipeline variables:
|
||||
variables:
|
||||
|
||||
@@ -24,7 +20,7 @@ variables:
|
||||
# TODO: add a clean-up mechanism
|
||||
BUILD_ROOT: ${USER_CI_TOP_DIR}/${CI_PROJECT_NAME}-${MACHINE_NAME}-pipeline-${CI_PIPELINE_ID}
|
||||
|
||||
# On LLNL's ruby, there is only one allocation shared among jobs in order to
|
||||
# On LLNL's quartz, there is only one allocation shared among jobs in order to
|
||||
# save time and resource. This allocation has to be uniquely named so that we
|
||||
# are sure to retrieve it.
|
||||
ALLOC_NAME: ${CI_PROJECT_NAME}_ci_${CI_PIPELINE_ID}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -35,8 +35,9 @@ variables:
|
||||
- when: on_success
|
||||
|
||||
# Lassen uses a different job scheduler (spectrum lsf) that does not allow
|
||||
# pre-allocation the same way slurm does. We use the pci queue on lassen
|
||||
# to speed-up the allocation.
|
||||
# pre-allocation the same way slurm does. We use pdebug queue on lassen
|
||||
# to speed-up the allocation. However this would not be scalable to
|
||||
# multiple builds.
|
||||
.build_and_test_on_lassen:
|
||||
extends: [.on_lassen]
|
||||
stage: build_and_test
|
||||
@@ -44,5 +45,5 @@ variables:
|
||||
- echo ${MFEM_DATA_DIR}
|
||||
- echo ${SPEC}
|
||||
# Next script uses 'THREADS': leaving it empty --> it uses 'make all -j'
|
||||
- lalloc 1 -W 45 -q pci --atsdisable tests/gitlab/build_and_test --spec "${SPEC}" --data-dir "${MFEM_DATA_DIR}" --data
|
||||
- lalloc 1 -W 45 -q pdebug --atsdisable tests/gitlab/build_and_test --spec "${SPEC}" --data-dir "${MFEM_DATA_DIR}" --data
|
||||
needs: [setup]
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -9,17 +9,17 @@
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
# GitLab pipelines configurations for the Ruby machine at LLNL
|
||||
# GitLab pipelines configurations for the Quartz machine at LLNL
|
||||
variables:
|
||||
MACHINE_NAME: ruby
|
||||
MACHINE_NAME: quartz
|
||||
|
||||
.on_ruby:
|
||||
.on_quartz:
|
||||
tags:
|
||||
- shell
|
||||
- ruby
|
||||
- quartz
|
||||
rules:
|
||||
# Don't run ruby jobs if...
|
||||
- if: '$CI_COMMIT_BRANCH =~ /_qnone/ || $ON_RUBY == "OFF"'
|
||||
# Don't run quartz jobs if...
|
||||
- if: '$CI_COMMIT_BRANCH =~ /_qnone/ || $ON_QUARTZ == "OFF"'
|
||||
when: never
|
||||
# Don't run autotest update if...
|
||||
- if: '$CI_JOB_NAME =~ /report/ && $AUTOTEST != "YES"'
|
||||
@@ -40,16 +40,16 @@ variables:
|
||||
- when: on_success
|
||||
|
||||
# Spack helped builds
|
||||
# Generic ruby build job, extending build script
|
||||
.build_and_test_on_ruby:
|
||||
extends: [.on_ruby]
|
||||
# Generic quartz build job, extending build script
|
||||
.build_and_test_on_quartz:
|
||||
extends: [.on_quartz]
|
||||
stage: build_and_test
|
||||
script:
|
||||
# THREADS is used by 'tests/gitlab/build_and_test', run below
|
||||
- export THREADS=16
|
||||
- export THREADS=12
|
||||
- echo ${ALLOC_NAME}
|
||||
- export JOBID=$(squeue -h --name=${ALLOC_NAME} --format=%A)
|
||||
- echo ${JOBID}
|
||||
- echo ${MFEM_DATA_DIR}
|
||||
- echo ${SPEC}
|
||||
- srun $( [[ -n "${JOBID}" ]] && echo "--jobid=${JOBID}" ) --reservation=ci -t 45 -N 1 tests/gitlab/build_and_test --spec "${SPEC}" --data-dir "${MFEM_DATA_DIR}" --data
|
||||
- srun $( [[ -n "${JOBID}" ]] && echo "--jobid=${JOBID}" ) -t 45 -N 1 tests/gitlab/build_and_test --spec "${SPEC}" --data-dir "${MFEM_DATA_DIR}" --data
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -18,7 +18,7 @@
|
||||
setup_baseline:
|
||||
tags:
|
||||
- shell
|
||||
- ruby
|
||||
- quartz
|
||||
stage: setup
|
||||
variables:
|
||||
GIT_STRATEGY: none
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -16,7 +16,7 @@
|
||||
setup:
|
||||
tags:
|
||||
- shell
|
||||
- ruby
|
||||
- quartz
|
||||
stage: setup
|
||||
variables:
|
||||
GIT_STRATEGY: none
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -14,14 +14,14 @@ stages:
|
||||
- build_and_test
|
||||
- report
|
||||
|
||||
opt_mpi_cuda_gcc:
|
||||
opt_mpi_cuda_xl_16_1_1_12:
|
||||
variables:
|
||||
SPEC: "%gcc@8.3.1 +mpi +cuda cuda_arch=70"
|
||||
SPEC: "%xl@16.1.1.12 +mpi +cuda cuda_arch=70"
|
||||
extends: .build_and_test_on_lassen
|
||||
|
||||
opt_mpi_cuda_hypre_cuda_gcc:
|
||||
opt_mpi_cuda_hypre_cuda_xl:
|
||||
variables:
|
||||
SPEC: "%gcc@8.3.1 +mpi +cuda cuda_arch=70 ^hypre+cuda~shared cuda_arch=70"
|
||||
SPEC: "%xl@16.1.1.12 +mpi +cuda cuda_arch=70 ^hypre+cuda~shared cuda_arch=70"
|
||||
extends: .build_and_test_on_lassen
|
||||
|
||||
# Jobs report
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -19,8 +19,8 @@ stages:
|
||||
- cleanup
|
||||
- baseline_publish
|
||||
|
||||
baselinecheck_mfem_intel_ruby:
|
||||
extends: [.on_ruby]
|
||||
baselinecheck_mfem_intel_quartz:
|
||||
extends: [.on_quartz]
|
||||
stage: baseline_check
|
||||
variables:
|
||||
# TPLS_DIR is used in .gitlab/scripts/baseline to provide the tpls location
|
||||
@@ -32,7 +32,7 @@ baselinecheck_mfem_intel_ruby:
|
||||
- echo ${BUILD_ROOT}
|
||||
- echo ${TPLS_DIR}
|
||||
# Used by the tests in MFEM/tests:
|
||||
- export MFEM_TEST_NP=48
|
||||
- export MFEM_TEST_NP=32
|
||||
# The next script uses the following environment variables:
|
||||
# * BASELINE_TEST, SYS_TYPE, CI_PROJECT_DIR, ARTIFACTS_DIR,
|
||||
# * BUILD_ROOT, TPLS_DIR, MACHINE_NAME
|
||||
@@ -44,16 +44,18 @@ baselinecheck_mfem_intel_ruby:
|
||||
allow_failure: true
|
||||
|
||||
cleanup:
|
||||
extends: .on_ruby
|
||||
extends: .on_quartz
|
||||
stage: cleanup
|
||||
variables:
|
||||
GIT_STRATEGY: none
|
||||
script:
|
||||
- echo "BUILD_ROOT=${BUILD_ROOT}"
|
||||
- rm -rf "${BUILD_ROOT}" || true
|
||||
- echo "CI_PROJECT_DIR=${CI_PROJECT_DIR}"
|
||||
- make -C "${CI_PROJECT_DIR}" distclean
|
||||
|
||||
report_baseline:
|
||||
extends: [.on_ruby]
|
||||
extends: [.on_quartz]
|
||||
stage: baseline_report
|
||||
script:
|
||||
- echo ${MACHINE_NAME}
|
||||
@@ -85,7 +87,7 @@ report_baseline:
|
||||
# We create an autotest-email.html file, because that's how we signal
|
||||
# that there was an error / diff (temporary).
|
||||
if [[ -f ${rundir}/${BASELINE_TEST}.err ]] || \
|
||||
[[ -f ${rundir}/${BASELINE_TEST}-${MACHINE_NAME}.diff ]]; then
|
||||
[[ -f ${rundir}/${BASELINE_TEST}-${SYS_TYPE}.diff ]]; then
|
||||
cp ${rundir}/pipeline.txt ${rundir}/autotest-email.html
|
||||
fi
|
||||
msg="GitLab CI log for ${BASELINE_TEST} on ${MACHINE_NAME} ($(date +%Y-%m-%d))"
|
||||
@@ -113,8 +115,8 @@ report_baseline:
|
||||
exit $err
|
||||
) 9> autotest.lock
|
||||
|
||||
baselinepublish_mfem_ruby:
|
||||
extends: [.on_ruby]
|
||||
baselinepublish_mfem_quartz:
|
||||
extends: [.on_quartz]
|
||||
stage: baseline_publish
|
||||
rules:
|
||||
# - if: '$CI_COMMIT_BRANCH == "master" || $REBASELINE == "YES"'
|
||||
@@ -129,5 +131,5 @@ baselinepublish_mfem_ruby:
|
||||
|
||||
include:
|
||||
- local: .gitlab/configs/common.yml
|
||||
- local: .gitlab/configs/ruby-config.yml
|
||||
- local: .gitlab/configs/quartz-config.yml
|
||||
- local: .gitlab/configs/setup-baseline.yml
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -19,54 +19,54 @@ stages:
|
||||
allocate_resource:
|
||||
variables:
|
||||
GIT_STRATEGY: none
|
||||
extends: .on_ruby
|
||||
extends: .on_quartz
|
||||
stage: allocate_resource
|
||||
script:
|
||||
- echo ${ALLOC_NAME}
|
||||
- salloc --exclusive --nodes=1 --reservation=ci --time=60 --no-shell --job-name=${ALLOC_NAME}
|
||||
- salloc --exclusive --nodes=1 --partition=pdebug --time=45 --no-shell --job-name=${ALLOC_NAME}
|
||||
timeout: 6h
|
||||
|
||||
# GitLab jobs for the Ruby machine at LLNL
|
||||
# GitLab jobs for the Quartz machine at LLNL
|
||||
debug_ser_gcc_10:
|
||||
variables:
|
||||
SPEC: "%gcc@10.3.1 +debug~mpi"
|
||||
extends: .build_and_test_on_ruby
|
||||
extends: .build_and_test_on_quartz
|
||||
|
||||
debug_par_gcc_10:
|
||||
variables:
|
||||
SPEC: "%gcc@10.3.1 +debug+mpi"
|
||||
extends: .build_and_test_on_ruby
|
||||
extends: .build_and_test_on_quartz
|
||||
|
||||
opt_ser_gcc_10:
|
||||
variables:
|
||||
SPEC: "%gcc@10.3.1 ~mpi"
|
||||
extends: .build_and_test_on_ruby
|
||||
extends: .build_and_test_on_quartz
|
||||
|
||||
opt_par_gcc_10:
|
||||
variables:
|
||||
SPEC: "%gcc@10.3.1"
|
||||
extends: .build_and_test_on_ruby
|
||||
extends: .build_and_test_on_quartz
|
||||
|
||||
opt_par_gcc_10_sundials:
|
||||
variables:
|
||||
SPEC: "%gcc@10.3.1 +sundials"
|
||||
extends: .build_and_test_on_ruby
|
||||
extends: .build_and_test_on_quartz
|
||||
|
||||
opt_par_gcc_10_petsc:
|
||||
variables:
|
||||
SPEC: "%gcc@10.3.1 +petsc ^petsc+mumps~superlu-dist"
|
||||
extends: .build_and_test_on_ruby
|
||||
extends: .build_and_test_on_quartz
|
||||
|
||||
opt_par_gcc_10_pumi:
|
||||
variables:
|
||||
SPEC: "%gcc@10.3.1 +pumi"
|
||||
extends: .build_and_test_on_ruby
|
||||
extends: .build_and_test_on_quartz
|
||||
|
||||
# Release
|
||||
release_resource:
|
||||
variables:
|
||||
GIT_STRATEGY: none
|
||||
extends: .on_ruby
|
||||
extends: .on_quartz
|
||||
stage: release_resource_and_report
|
||||
script:
|
||||
- echo ${ALLOC_NAME}
|
||||
@@ -78,17 +78,17 @@ release_resource:
|
||||
report_job_success:
|
||||
stage: release_resource_and_report
|
||||
extends:
|
||||
- .on_ruby
|
||||
- .on_quartz
|
||||
- .report_job_success
|
||||
|
||||
report_job_failure:
|
||||
stage: release_resource_and_report
|
||||
extends:
|
||||
- .on_ruby
|
||||
- .on_quartz
|
||||
- .report_job_failure
|
||||
|
||||
include:
|
||||
- local: .gitlab/configs/common.yml
|
||||
- local: .gitlab/configs/ruby-config.yml
|
||||
- local: .gitlab/configs/quartz-config.yml
|
||||
- local: .gitlab/configs/setup-build-and-test.yml
|
||||
- local: .gitlab/configs/report-build-and-test.yml
|
||||
@@ -1,6 +1,6 @@
|
||||
#!/bin/bash
|
||||
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -14,9 +14,6 @@
|
||||
# locals
|
||||
glob_err=${BASELINE_TEST}.err
|
||||
base=${BASELINE_TEST}-${SYS_TYPE}
|
||||
if [[ "${MACHINE_NAME}" == "ruby" ]]; then
|
||||
base="${BASELINE_TEST}-${MACHINE_NAME}"
|
||||
fi
|
||||
base_diff=${base}.diff
|
||||
base_patch=${base}.patch
|
||||
base_out=${base}.out
|
||||
@@ -31,21 +28,21 @@ cd tests
|
||||
mkdir _${BASELINE_TEST} && cd _${BASELINE_TEST}
|
||||
|
||||
# run
|
||||
if [[ "${MACHINE_NAME}" == "ruby" ]]; then
|
||||
salloc --nodes=1 --exclusive --reservation=ci ../runtest ../../mfem "${BASELINE_TEST} ${TPLS_DIR}"
|
||||
if [[ "${MACHINE_NAME}" == "quartz" || "${MACHINE_NAME}" == "ruby" ]]; then
|
||||
salloc --nodes=1 -p pdebug ../runtest ../../mfem "${BASELINE_TEST} ${TPLS_DIR}"
|
||||
elif [[ ${MACHINE_NAME} == "corona" ]]; then
|
||||
salloc --nodes=1 -t 60 -p pbatch ../runtest ../../mfem "${BASELINE_TEST} ${TPLS_DIR}"
|
||||
elif [[ ${MACHINE_NAME} == "lassen" ]]; then
|
||||
lalloc 1 -q pci ../runtest ../../mfem "${BASELINE_TEST} ${TPLS_DIR}"
|
||||
lalloc 1 -q pdebug ../runtest ../../mfem "${BASELINE_TEST} ${TPLS_DIR}"
|
||||
else
|
||||
echo "Unknown machine: MACHINE_NAME=$MACHINE_NAME"
|
||||
exit 1
|
||||
fi
|
||||
status="$?"
|
||||
|
||||
# post
|
||||
mkdir ${artifacts_path}
|
||||
|
||||
status=0
|
||||
if [[ -f ${BASELINE_TEST}.out ]]; then
|
||||
cp ${BASELINE_TEST}.out ${artifacts_path}
|
||||
fi
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
#!/bin/bash
|
||||
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
#!/bin/bash
|
||||
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -11,7 +11,7 @@
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
# There will be collision between corona and ruby baselines.
|
||||
# There will be collision between corona and quartz baselines.
|
||||
# Once the corresponding files have been generated, we can switch to machine
|
||||
# specific ref.
|
||||
ARTIFACT_PATH=${CI_PROJECT_DIR}/${ARTIFACTS_DIR}/baseline-${SYS_TYPE}
|
||||
@@ -21,7 +21,7 @@ PATCH_FILE=${ARTIFACT_PATH}.patch
|
||||
FULL_FILE=${ARTIFACT_PATH}.out
|
||||
DIFF_FILE=${ARTIFACT_PATH}.diff
|
||||
|
||||
# There will be collision between corona and ruby baselines.
|
||||
# There will be collision between corona and quartz baselines.
|
||||
# Once the corresponding files have been generated, we can switch to machine
|
||||
# specific ref.
|
||||
SAVED_NAME=baseline-${SYS_TYPE}.saved
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
#!/bin/bash
|
||||
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
#!/bin/bash
|
||||
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
#!/bin/bash
|
||||
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -8,314 +8,18 @@
|
||||
https://mfem.org
|
||||
|
||||
|
||||
Version 4.8.1 (development)
|
||||
Version 4.6.1 (development)
|
||||
===========================
|
||||
|
||||
|
||||
Version 4.8, released on Apr 9, 2025
|
||||
====================================
|
||||
|
||||
Discretization improvements
|
||||
---------------------------
|
||||
- Added high-order basis functions on pyramid-shaped elements for all spaces in
|
||||
the de Rham complex based on the paper "Orientation embedded high order shape
|
||||
functions for the exact sequence elements of all shapes" by Fuentes, Keith,
|
||||
Demkowicz and Nagaraj (doi.org/10.1016/j.camwa.2015.04.027). Positive basis
|
||||
functions (Bernstein basis) for H1 and L2 on pyramids were also added.
|
||||
|
||||
- Added support for parallel p- and hp-refinement on quad/hex meshes. For hp, we
|
||||
currently support only isotropic refinement with L2 or H1 spaces. See the new
|
||||
miniapps hpref and phpref in the miniapps/meshing/ directory.
|
||||
|
||||
- Added several improvements for hyperbolic problems:
|
||||
* Assembly of Jacobians in HyperbolicFormIntegrator
|
||||
* Component-wise upwinded flux (ComponentwiseUpwindFlux)
|
||||
* Average fluxes in NumericalFlux (formerly RiemannSolver) and FluxFunction
|
||||
|
||||
- Added convenience methods to class FiniteElementSpace to directly identify all
|
||||
degrees of freedom on the exterior faces of the domain, without referencing
|
||||
boundary element attributes (GetExteriorVDofs and GetExteriorTrueDofs).
|
||||
|
||||
- Altered (Par)GridFunction::Compute*Error functions to ensure they return
|
||||
non-negative values and therefore behave as "norms".
|
||||
|
||||
- SubMesh and ParSubMesh have been extended to work on nonconforming meshes.
|
||||
Extracting volume and exterior surface submeshes are both supported.
|
||||
|
||||
- LinearFormIntegrator, BilinearFormIntegrator and NonlinearFormIntegrator now
|
||||
inherit from a base class Integrator that centralizes the logic for selecting
|
||||
quadrature rules. This includes a virtual method GetDefaultIntegrationRule,
|
||||
which should be favored over directly defining a default integration rule in
|
||||
the element-level assembly routines. The latter is still possible, by leaving
|
||||
the new virtual method as its default base implementation of returning NULL.
|
||||
|
||||
- Added NURBS-based H(div) and H(curl) elements in 2D and 3D. Currently only for
|
||||
single patch meshes in serial.
|
||||
|
||||
- Refactored ALGOIM cut integration rules. The interface is unified with the
|
||||
interface for moment based cut integration rules.
|
||||
|
||||
- FiniteElementSpace has new methods to directly set the prolongation and
|
||||
restriction operators to user-specified sparse matrices.
|
||||
|
||||
- Added support for H(div) spaces in class QuadratureInterpolator. Currently only
|
||||
(vector) VALUES, (vector) PHYSICAL_VALUES, and PHYSICAL_MAGNITUDES evaluations
|
||||
are implemented.
|
||||
|
||||
- Added support for boundary constraints to class Hybridization.
|
||||
|
||||
- Added support for custom interpolation procedure in FindPointsGSLIB.
|
||||
|
||||
- Added GSLIB-based gather-scatter operator.
|
||||
|
||||
Meshing improvements
|
||||
--------------------
|
||||
- Added support for nonuniform anisotropic mesh refinement on serial quad/hex
|
||||
meshes with arbitrary spacing in each direction. This enables in particular
|
||||
3:1 refinement, as demonstrated in the new meshing miniapp ref321.
|
||||
|
||||
- Added capabilities for optimization and adaptation of periodic meshes with
|
||||
TMOP. The internals of TMOP were modified so that the optimization problem is
|
||||
always solved with respect to mesh displacements.
|
||||
|
||||
- New convenience methods for manipulating boundary attribute markers in class
|
||||
Mesh: MarkExternalBoundaries, MarkNamedBoundaries, UnmarkInternalBoundaries
|
||||
and UnmarkNamedBoundaries. See Examples 1/1p and 11p for basic usage.
|
||||
|
||||
- Added a new method, GetExteriorFaceMarker, to the serial and parallel mesh
|
||||
classes for identifying faces on the exterior of the mesh irrespective of
|
||||
their presence in the list of "boundary elements".
|
||||
|
||||
- Added native AD support for computing the derivatives of numerous TMOP metrics
|
||||
that didn't have first or second derivative implementations.
|
||||
|
||||
- Added ExodusII output capability which can handle in particular pyramid and
|
||||
wedge element types. Mixed meshes are also supported.
|
||||
|
||||
- Added InverseElementTransformation::InitGuessType::EdgeScan as an alternative
|
||||
initial guess type. This guess type tries solving with multiple initial guesses
|
||||
along the r/s/t=0 edges of the element until a valid solution is found or all
|
||||
initial guess points are exhausted.
|
||||
|
||||
- Added new convenience constructors for NURBS patches and knot vectors.
|
||||
|
||||
GPU computing
|
||||
-------------
|
||||
- Extended FindPointsGSLIB to support general field interpolation on GPUs. Note
|
||||
that this requires that switch from gslib v1.0.7 to v1.0.9.
|
||||
|
||||
- Added support for GPU-accelerated batched linear algebra (using cuBLAS,
|
||||
hipBLAS, MAGMA, or native MFEM functionality) through the BatchedLinAlg class.
|
||||
|
||||
- A new GPU kernel dispatch mechanism was introduced. Users can instantiate
|
||||
specialized kernels for specific combinations of (for example) polynomial
|
||||
degree and number of quadrature points using method AddSpecialization in
|
||||
classes DiffusionIntegrator and MassIntegrator (this functionality may be
|
||||
added to more integrators in the future).
|
||||
|
||||
- Added BatchInverseElementTransformation to batch InverseElementTransformation
|
||||
searches. Batch searches are currently limited to meshes with a single element
|
||||
geometry type of SEGMENT, SQUARE, or CUBE. Additional element geometry types
|
||||
may be added in the future. Mixed element order meshes are supported. Batch
|
||||
searches can be performed on the CPU (serial per MPI rank) or GPU. Embedded
|
||||
elements (SEGMENT in 2D/3D space or SQUARE in 3D space) are supported, however
|
||||
the existing solvers may struggle to find a valid solution.
|
||||
|
||||
- Calls to slower fallback kernels can be reported to mfem::err by setting the
|
||||
environment variable MFEM_REPORT_KERNELS to any value other than NO or by
|
||||
explicitly calling KernelReporter::Enable. For higher performance, users can
|
||||
then add specializations for these kernels.
|
||||
|
||||
- Element assembly kernels have been added for low-order refined -> high-order
|
||||
transfer operators. New kernels can be offloaded as device kernels. Example
|
||||
usage may be found in lor-transfer.cpp in the miniapps/tools/ directory.
|
||||
|
||||
- Added GPU acceleration and element assembly for DivDivIntegrator and
|
||||
NormalTraceJumpIntegrator.
|
||||
|
||||
- Allow BlockLowerTriangularPreconditioner to run on GPU.
|
||||
|
||||
- Use device vectors in GMRES, FGMRES and other iterative methods.
|
||||
|
||||
Linear and nonlinear solvers
|
||||
----------------------------
|
||||
- Added GPU acceleration of the algebraic hybridization solver for grad-div
|
||||
problems in H(div). See Example 4.
|
||||
|
||||
- Added a self-contained implementation of the Method of Moving Asymptotes (MMA)
|
||||
for solving optimization problems.
|
||||
|
||||
- Added support for SUNDIALS v7. See the section "API changes" for some small
|
||||
changes related to this new version.
|
||||
|
||||
- Changed the name of class IterativeSolverMonitor to IterativeSolverController,
|
||||
which now allows for specifying convergence by a user defined criterion. For
|
||||
backward compatibility, the old name is still available.
|
||||
|
||||
- Refactored the ARKStepSolver class (ARKODE interface) to use the Mult() method
|
||||
of TimeDependentOperator only when the associated ODE operator is expressed in
|
||||
explicit form (i.e., TimeDependentOperator::isExplicit()), otherwise the
|
||||
method ExplicitMult() is used. A check has been added to ARKStepSolver to
|
||||
verify that the associated ODE operator is not in explicit form when a mass
|
||||
matrix solver is enabled via a call to either the UseMFEMMassLinearSolver or
|
||||
UseSundialsMassLinearSolver methods. This is because enabling a mass matrix
|
||||
solver assumes that F(u,k,t) = M k in the associated ODE operator.
|
||||
|
||||
- Added ODE solvers selection routines. This creates a uniformity across
|
||||
examples, miniapps and other executables in regard to ODE (time-integrator)
|
||||
selection.
|
||||
|
||||
- Added new mechanism for retrieving and setting state vectors in ODE solvers.
|
||||
This is relevant for AB/AM and gen-alpha solvers.
|
||||
|
||||
- Added ODEsolver/ODEsolver2 unit tests to verify order of convergence and
|
||||
read/write functionality.
|
||||
|
||||
New and updated examples and miniapps
|
||||
-------------------------------------
|
||||
- Added an MFEM example for the eikonal equation (examples/ex40) based on the
|
||||
proximal Galerkin method introduced by Keith and Surowiec.
|
||||
|
||||
- Added miniapps to demonstrate the H(div) and H(curl) NURBS elements.
|
||||
|
||||
- Fixed element visualization in the Mesh explorer miniapp.
|
||||
|
||||
- Added a command line option to all miniapps (-p or --send-port) for
|
||||
specifying the GLVis server socket port (19916 by default).
|
||||
|
||||
- Added a new toy miniapp that animates an interesting fidget spiral cone toy.
|
||||
See miniapps/toys/spiral.cpp.
|
||||
- Introduced support for higher order non conformal Nedelec elements on
|
||||
simplices in ParMesh.
|
||||
|
||||
Miscellaneous
|
||||
-------------
|
||||
- Updated the benchmarks (in tests/benchmarks) to work with the latest Google
|
||||
Benchmarks classes (version 1.9.1). Renamed the MFEM_ENABLE_GOOGLE_BENCHMARKS
|
||||
CMake option to just MFEM_ENABLE_BENCHMARKS.
|
||||
|
||||
- Updated the minimum CMake version requirements:
|
||||
* CMake >= 3.12 for CPU builds,
|
||||
* CMake >= 3.17 for CUDA builds, and
|
||||
* CMake >= 3.14 for HIP builds (CMake >= 3.12 may work as well, not tested).
|
||||
|
||||
- Various other simplifications, extensions, and bugfixes in the code.
|
||||
|
||||
API changes
|
||||
-----------
|
||||
- In class GridFunction, fec was renamed to fec_owned.
|
||||
|
||||
- RiemannSolver was renamed to NumericalFlux (the old name has been deprecated
|
||||
through typedef).
|
||||
|
||||
- API changes due to SUNDIALS v7:
|
||||
* the SUNDIALS types realtype and booleantype are no longer defined by v7
|
||||
and therefore MFEM now uses the new type names sunrealtype and
|
||||
sunbooleantype, respectively, which MFEM defines when using SUNDIALS < v6
|
||||
where these types were not defined.
|
||||
* The SUNDIALS macro SUNLS_SUCCESS and some other *_SUCCESS macros were
|
||||
removed and replaced by SUN_SUCCESS in v7, so to avoid tedious checks for
|
||||
SUNDIALS versions, MFEM now defines and uses the constant SUN_SUCCESS when
|
||||
using SUNDIALS < v7.
|
||||
* The constants SUN_PREC_*, introduced by SUNDIALS v6 are now introduced by
|
||||
MFEM when using SUNDIALS < v6 to avoid tedious version checks.
|
||||
|
||||
- TMOP_Metric_skew2D has been marked as deprecated.
|
||||
|
||||
|
||||
Version 4.7, released on May 7, 2024
|
||||
====================================
|
||||
|
||||
- Added support for single precision (with corresponding hypre build). The MFEM
|
||||
floating point type was generalized from `double` to `real_t`. For details see
|
||||
https://github.com/orgs/mfem/discussions/4207.
|
||||
|
||||
Meshing improvements
|
||||
--------------------
|
||||
- Added the capability to partition (big) serial meshes in serial code, see the
|
||||
new classes MeshPartitioner and MeshPart. This capability is also exposed as a
|
||||
menu option in the mesh-explorer miniapp in miniapps/meshing.
|
||||
|
||||
- Added named attribute sets and basic supporting methods to the Mesh class as a
|
||||
convenient means of referring to sets of domain or boundary attribute numbers.
|
||||
See the new Example 39/39p and data/compass.mesh.
|
||||
|
||||
- Introduced formulas for refinement of patches in NURBS meshes. Refinement by
|
||||
arbitrary integer factors is also enabled, e.g. in the mesh-explorer miniapp.
|
||||
NURBS coarsening and knot removal are also introduced.
|
||||
|
||||
- Added support for internal boundary elements in nonconforming meshes.
|
||||
|
||||
- The ReadCubit Genesis mesh importer has been rewritten to improve readability.
|
||||
|
||||
Discretization improvements
|
||||
---------------------------
|
||||
- Added a new nonlinear integrator, `HyperbolicFormIntegrator` that implements
|
||||
both element-wise weak divergence and face-wise numerical flux for a general
|
||||
system of hyperbolic conservation laws. To use the integrator for a specific
|
||||
flux function, users can define a derived class of `FluxFunction`. Currently,
|
||||
advection, Burgers, shallow-water and Euler equations (see Example 18/18p) are
|
||||
available.
|
||||
|
||||
- Added a capability to construct cut-surface and cut-volume IntegrationRules
|
||||
through a moment-fitting approach. The cut is specified by the zero level set
|
||||
of a Coefficient. See fem/intrules_cut.hpp and the new Example 38.
|
||||
|
||||
- Introduced support for high-order nonconforming Nedelec elements on simplices.
|
||||
|
||||
GPU computing
|
||||
-------------
|
||||
- Added partial assembly and GPU support for the DG diffusion integrator.
|
||||
|
||||
- Efficient GPU-accelerated LOR assembly is now supported on surface meshes.
|
||||
|
||||
- Added functionality to automatically configure hypre's compute policy to match
|
||||
MFEM's compute policy when hypre is built with GPU support. Requires version
|
||||
hypre-2.31.0 or later.
|
||||
|
||||
- Added support for full assembly on simplices.
|
||||
|
||||
- Added partial assembly for linear elasticity (no sum factorization for now).
|
||||
|
||||
- Added functionality for BilinearFormIntegrators to use kernels that work for
|
||||
both tensor and unstructured elements.
|
||||
|
||||
- The RAJA backend will use `seq_exec` for serial loop execution when RAJA
|
||||
v2023.06.00 and beyond is detected as `loop_exec` is deprecated.
|
||||
|
||||
- API change: The macro MFEM_HYPRE_FORALL (from hypre.hpp) which was intended
|
||||
for internal use, has been removed and replaced by the function template
|
||||
mfem::hypre_forall in general/forall.hpp.
|
||||
|
||||
New and updated examples and miniapps
|
||||
-------------------------------------
|
||||
- Added a new miniapp illustrating elastic contact based on the Tribol library,
|
||||
(https://github.com/LLNL/Tribol). See miniapps/tribol.
|
||||
|
||||
- Added a miniapp to demonstrate low order refined (LOR) block preconditioning
|
||||
for linear elasticity on GPUs. See miniapps/solvers/lor_elast.
|
||||
|
||||
- Added a new block solver in miniapp/solvers for the Darcy problem. The new
|
||||
solver is based on a Bramble-Pasciak preconditioning. User can use and
|
||||
implement their own preconditioner for the mass matrix.
|
||||
|
||||
- Added a small miniapp for printing the shape functions of a KnotVector. See
|
||||
miniapps/nurbs/nurbs_printfunc.cpp.
|
||||
|
||||
- Added two new example codes: 38 and 39/39p described above. Substantially
|
||||
updated Example 18/18p.
|
||||
|
||||
Miscellaneous
|
||||
-------------
|
||||
- Updated the Doxygen documentation style, which now requires Doxygen version
|
||||
1.9.8 or later. See the doc/ directory.
|
||||
|
||||
- Improved thread safety for global variables in the library, e.g. for IntRules,
|
||||
RefinedIntRules, GlobGeometryRefiner, and FiniteElement::dof2quad_array.
|
||||
|
||||
- PETSc integration now generally requires PETSc version 3.21 or later, though
|
||||
depending on the functionality older versions may still work.
|
||||
|
||||
- Various other simplifications, extensions, and bugfixes in the code.
|
||||
|
||||
|
||||
Version 4.6, released on September 27, 2023
|
||||
===========================================
|
||||
@@ -336,6 +40,7 @@ Meshing improvements
|
||||
* The edge to knot map for NURBS meshes can be determined automatically. It is
|
||||
no longer needed to specify this in the NURBS mesh.
|
||||
* Added curve interpolation method for NURBS.
|
||||
* Added new small miniapp for printing of shape functions of a KnotVector
|
||||
* See miniapps/nurbs for example meshes and miniapps.
|
||||
|
||||
Discretization improvements
|
||||
|
||||
+61
-143
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -12,17 +12,15 @@
|
||||
# The variable CMAKE_CXX_STANDARD and related were introduced in CMake v3.1
|
||||
# Version 3.8 fixes the handling of CMAKE_CXX_STANDARD for try_compile.
|
||||
# Version 3.8 or newer is required for direct CUDA support.
|
||||
# Version 3.12 or newer is required for setting maximum policy version.
|
||||
cmake_minimum_required(VERSION 3.12.0...4.0.0)
|
||||
cmake_minimum_required(VERSION 3.8)
|
||||
message(STATUS "CMake version: ${CMAKE_VERSION}")
|
||||
set(USER_CONFIG "${CMAKE_CURRENT_SOURCE_DIR}/config/user.cmake" CACHE PATH
|
||||
"Path to optional user configuration file.")
|
||||
|
||||
# Require C++11 and disable compiler-specific extensions
|
||||
set(CMAKE_CXX_STANDARD 11 CACHE STRING "C++ standard to use.")
|
||||
set(CMAKE_CXX_STANDARD_REQUIRED ON CACHE BOOL
|
||||
"Force the use of the chosen C++ standard.")
|
||||
set(CMAKE_CXX_EXTENSIONS OFF CACHE BOOL "Enable C++ standard extensions.")
|
||||
set(CMAKE_CXX_STANDARD 11)
|
||||
set(CMAKE_CXX_STANDARD_REQUIRED ON)
|
||||
set(CMAKE_CXX_EXTENSIONS OFF)
|
||||
|
||||
# Load user settings before the defaults - this way the defaults will not
|
||||
# overwrite the user set options. If the user has not set all options, we still
|
||||
@@ -59,7 +57,7 @@ project(mfem NONE)
|
||||
# Current version of MFEM, see also `makefile`.
|
||||
# mfem_VERSION = (string)
|
||||
# MFEM_VERSION = (int) [automatically derived from mfem_VERSION]
|
||||
set(${PROJECT_NAME}_VERSION 4.8.1)
|
||||
set(${PROJECT_NAME}_VERSION 4.6.1)
|
||||
|
||||
# Prohibit in-source build
|
||||
if (${PROJECT_SOURCE_DIR} STREQUAL ${PROJECT_BINARY_DIR})
|
||||
@@ -88,51 +86,38 @@ if (MFEM_USE_STRUMPACK OR MFEM_USE_MUMPS)
|
||||
# Just needed to find the MPI_Fortran libraries to link with
|
||||
set(XSDK_ENABLE_Fortran ON)
|
||||
endif()
|
||||
# Ginkgo requires C++17:
|
||||
if ((MFEM_USE_GINKGO) AND ("${CMAKE_CXX_STANDARD}" LESS "17"))
|
||||
set(CMAKE_CXX_STANDARD 17 CACHE STRING "C++ standard to use." FORCE)
|
||||
# Google Benchmark, SUNDIALS, STRUMPACK, Tribol, RAJA and Umpire require C++14:
|
||||
elseif ((MFEM_USE_BENCHMARK OR
|
||||
MFEM_USE_SUNDIALS OR
|
||||
MFEM_USE_STRUMPACK OR
|
||||
MFEM_USE_TRIBOL OR
|
||||
MFEM_USE_RAJA OR
|
||||
MFEM_USE_UMPIRE) AND
|
||||
# SUNDIALS, STRUMPACK, Ginkgo, RAJA and Umpire require C++14:
|
||||
if ((MFEM_USE_SUNDIALS OR
|
||||
MFEM_USE_STRUMPACK OR
|
||||
MFEM_USE_GINKGO OR
|
||||
MFEM_USE_RAJA OR
|
||||
MFEM_USE_UMPIRE) AND
|
||||
("${CMAKE_CXX_STANDARD}" LESS "14"))
|
||||
set(CMAKE_CXX_STANDARD 14 CACHE STRING "C++ standard to use." FORCE)
|
||||
set(CMAKE_CXX_STANDARD 14)
|
||||
endif()
|
||||
|
||||
# Include xSDK default CMake file.
|
||||
include("${CMAKE_CURRENT_SOURCE_DIR}/config/XSDKDefaults.cmake")
|
||||
|
||||
# Path to MFEM's CMake modules and utilities.
|
||||
set(MFEM_CMAKE_PATH ${PROJECT_SOURCE_DIR}/config)
|
||||
set(CMAKE_MODULE_PATH ${MFEM_CMAKE_PATH}/cmake/modules)
|
||||
|
||||
# Load MFEM CMake utilities.
|
||||
include(MfemCmakeUtilities)
|
||||
|
||||
# Enable languages.
|
||||
enable_language(CXX)
|
||||
if (MINGW)
|
||||
# MinGW GCC does not expose the functions jn/_jn, yn/_yn (used in Example
|
||||
# 25/25p) unless we use '-std=gnu++11':
|
||||
set(CMAKE_CXX_EXTENSIONS ON
|
||||
CACHE BOOL "Enable C++ standard extensions." FORCE)
|
||||
set(CMAKE_CXX_EXTENSIONS ON)
|
||||
endif()
|
||||
if (MFEM_USE_CUDA)
|
||||
if (MFEM_USE_HIP)
|
||||
message(FATAL_ERROR " *** MFEM_USE_HIP cannot be combined with MFEM_USE_CUDA.")
|
||||
endif()
|
||||
# CUDAToolkit was added in CMake 3.17, so we require at least CMake 3.17 when
|
||||
# CUDA is enabled:
|
||||
if (CMAKE_VERSION VERSION_LESS 3.17.0)
|
||||
message(FATAL_ERROR "CUDA support requires CMake >= 3.17")
|
||||
endif()
|
||||
# Use ${CMAKE_CXX_COMPILER} as the cuda host compiler.
|
||||
if (NOT CMAKE_CUDA_HOST_COMPILER)
|
||||
set(CMAKE_CUDA_HOST_COMPILER ${CMAKE_CXX_COMPILER})
|
||||
endif()
|
||||
enable_language(CUDA)
|
||||
set(CMAKE_CUDA_STANDARD ${CMAKE_CXX_STANDARD})
|
||||
set(CMAKE_CUDA_STANDARD_REQUIRED ON)
|
||||
set(CMAKE_CUDA_EXTENSIONS OFF)
|
||||
set(CUDA_FLAGS "--expt-extended-lambda")
|
||||
if (CMAKE_VERSION VERSION_LESS 3.18.0)
|
||||
set(CUDA_FLAGS "-arch=${CUDA_ARCH} ${CUDA_FLAGS}")
|
||||
@@ -147,19 +132,17 @@ if (MFEM_USE_CUDA)
|
||||
set(CUDA_ARCH "CMAKE_CUDA_ARCHITECTURES: ${CMAKE_CUDA_ARCHITECTURES}")
|
||||
endif()
|
||||
message(STATUS "Using CUDA architecture: ${CUDA_ARCH}")
|
||||
enable_language(CUDA)
|
||||
set(CMAKE_CUDA_STANDARD ${CMAKE_CXX_STANDARD} CACHE STRING
|
||||
"CUDA standard to use.")
|
||||
set(CMAKE_CUDA_STANDARD_REQUIRED ON CACHE BOOL
|
||||
"Force the use of the chosen CUDA standard.")
|
||||
set(CMAKE_CUDA_EXTENSIONS OFF CACHE BOOL "Enable CUDA standard extensions.")
|
||||
if (CMAKE_VERSION VERSION_LESS 3.12.0)
|
||||
# CMake versions 3.8 and 3.9 require this to work; 3.10 and 3.11 are not
|
||||
# tested and may not actually need this (but should be ok to keep).
|
||||
set(CUDA_FLAGS "-ccbin=${CMAKE_CXX_COMPILER} ${CUDA_FLAGS}")
|
||||
set(CMAKE_CUDA_HOST_LINK_LAUNCHER ${CMAKE_CXX_COMPILER})
|
||||
endif()
|
||||
set(CMAKE_CUDA_FLAGS "${CMAKE_CUDA_FLAGS} ${CUDA_FLAGS}")
|
||||
find_package(CUDAToolkit REQUIRED)
|
||||
set(CUSPARSE_FOUND TRUE)
|
||||
set(CUSPARSE_LIBRARIES "cusparse")
|
||||
set(CUBLAS_FOUND TRUE)
|
||||
# Initialize CUSPARSE_LIBRARIES and CUBLAS_LIBRARIES:
|
||||
mfem_culib_set_libraries(CUSPARSE cusparse)
|
||||
mfem_culib_set_libraries(CUBLAS cublas)
|
||||
set(CUBLAS_LIBRARIES "cublas")
|
||||
endif()
|
||||
|
||||
if (XSDK_ENABLE_C)
|
||||
@@ -172,6 +155,13 @@ endif()
|
||||
# Suppress warnings about MACOSX_RPATH
|
||||
set(CMAKE_MACOSX_RPATH OFF CACHE BOOL "")
|
||||
|
||||
# CMake needs to know where to find things
|
||||
set(MFEM_CMAKE_PATH ${PROJECT_SOURCE_DIR}/config)
|
||||
set(CMAKE_MODULE_PATH ${MFEM_CMAKE_PATH}/cmake/modules)
|
||||
|
||||
# Load MFEM CMake utilities.
|
||||
include(MfemCmakeUtilities)
|
||||
|
||||
string(TOUPPER "${PROJECT_NAME}" PROJECT_NAME_UC)
|
||||
mfem_version_to_int(${${PROJECT_NAME}_VERSION} ${PROJECT_NAME_UC}_VERSION)
|
||||
set(${PROJECT_NAME_UC}_VERSION_STRING ${${PROJECT_NAME}_VERSION})
|
||||
@@ -190,19 +180,6 @@ endif()
|
||||
# Process configuration options
|
||||
#-------------------------------------------------------------------------------
|
||||
|
||||
# MFEM_PRECISION -> MFEM_USE_SINGLE, MFEM_USE_DOUBLE
|
||||
if (MFEM_PRECISION MATCHES "^(double|Double|DOUBLE)$")
|
||||
set(MFEM_USE_SINGLE OFF)
|
||||
set(MFEM_USE_DOUBLE ON)
|
||||
elseif (MFEM_PRECISION MATCHES "^(single|Single|SINGLE)$")
|
||||
set(MFEM_USE_SINGLE ON)
|
||||
set(MFEM_USE_DOUBLE OFF)
|
||||
else()
|
||||
message(FATAL_ERROR " *** Invalid floating-point precision: "
|
||||
"MFEM_PRECISION = ${MFEM_PRECISION}")
|
||||
endif()
|
||||
message(STATUS "Floating-point precision: MFEM_PRECISION = ${MFEM_PRECISION}")
|
||||
|
||||
# MFEM_DEBUG
|
||||
if (CMAKE_BUILD_TYPE MATCHES "Debug|debug|DEBUG")
|
||||
set(MFEM_DEBUG ON)
|
||||
@@ -237,7 +214,6 @@ if (MFEM_USE_HIP)
|
||||
list(INSERT CMAKE_PREFIX_PATH 0 ${ROCM_PATH})
|
||||
endif()
|
||||
find_package(HIP REQUIRED)
|
||||
find_package(HIPBLAS REQUIRED)
|
||||
find_package(HIPSPARSE REQUIRED)
|
||||
endif()
|
||||
|
||||
@@ -344,10 +320,7 @@ if (MFEM_USE_SUNDIALS)
|
||||
if (MFEM_USE_HIP)
|
||||
list(APPEND SUNDIALS_COMPONENTS NVector_Hip)
|
||||
endif()
|
||||
# The Core component was added in SUNDIALS v7, so we treat it as optional in
|
||||
# order to support older versions.
|
||||
find_package(SUNDIALS REQUIRED ${SUNDIALS_COMPONENTS}
|
||||
OPTIONAL_COMPONENTS Core)
|
||||
find_package(SUNDIALS REQUIRED ${SUNDIALS_COMPONENTS})
|
||||
endif()
|
||||
|
||||
# SuperLU_DIST can only be enabled in parallel
|
||||
@@ -406,10 +379,6 @@ if (MFEM_USE_AMGX)
|
||||
find_package(AMGX REQUIRED)
|
||||
endif()
|
||||
|
||||
if (MFEM_USE_MAGMA)
|
||||
find_package(MAGMA REQUIRED)
|
||||
endif()
|
||||
|
||||
if (MFEM_USE_CONDUIT)
|
||||
find_package(Conduit REQUIRED conduit relay blueprint)
|
||||
endif()
|
||||
@@ -518,15 +487,6 @@ if (MFEM_USE_PARELAG)
|
||||
find_package(PARELAG REQUIRED)
|
||||
endif()
|
||||
|
||||
# Tribol
|
||||
if (MFEM_USE_TRIBOL)
|
||||
if (MFEM_USE_MPI)
|
||||
find_package(Tribol REQUIRED tribol redecomp)
|
||||
else()
|
||||
message(FATAL_ERROR " *** Tribol requires that MPI be enabled.")
|
||||
endif()
|
||||
endif()
|
||||
|
||||
# Enzyme
|
||||
if (MFEM_USE_ENZYME)
|
||||
find_package(ENZYME REQUIRED)
|
||||
@@ -571,9 +531,8 @@ find_package(Threads REQUIRED)
|
||||
set(MFEM_TPLS OPENMP HYPRE LAPACK BLAS SuperLUDist STRUMPACK METIS SuiteSparse
|
||||
SUNDIALS PETSC SLEPC MUMPS AXOM FMS CONDUIT Ginkgo GNUTLS GSLIB
|
||||
NETCDF MPFR PUMI HIOP POSIXCLOCKS MFEMBacktrace ZLIB OCCA CEED RAJA UMPIRE
|
||||
ADIOS2 MKL_CPARDISO MKL_PARDISO AMGX MAGMA CUSPARSE CUBLAS CALIPER CODIPACK
|
||||
BENCHMARK PARELAG TRIBOL MPI_CXX HIP HIPBLAS HIPSPARSE MOONOLITH BLITZ
|
||||
ALGOIM ENZYME)
|
||||
ADIOS2 CUBLAS CUSPARSE MKL_CPARDISO MKL_PARDISO AMGX CALIPER CODIPACK
|
||||
BENCHMARK PARELAG MPI_CXX HIP HIPSPARSE MOONOLITH BLITZ ALGOIM ENZYME)
|
||||
|
||||
# Add all *_FOUND libraries in the variable TPL_LIBRARIES.
|
||||
set(TPL_LIBRARIES "")
|
||||
@@ -622,37 +581,15 @@ set(MASTER_HEADERS
|
||||
${PROJECT_SOURCE_DIR}/mfem.hpp
|
||||
${PROJECT_SOURCE_DIR}/mfem-performance.hpp)
|
||||
|
||||
# Installation options (we use GNUInstallDirs but prefer lib by default)
|
||||
set(MFEM_USE_GNUINSTALLDIRS OFF CACHE BOOL
|
||||
"Use CMAKE_INSTALL_LIBDIR as defined by the GNUInstallDirs CMake module.")
|
||||
if (NOT MFEM_USE_GNUINSTALLDIRS)
|
||||
mfem_cache_path(CMAKE_INSTALL_LIBDIR "lib" "Object code libraries (lib)")
|
||||
endif()
|
||||
include(GNUInstallDirs)
|
||||
mfem_cache_path(INSTALL_INCLUDE_DIR "${CMAKE_INSTALL_INCLUDEDIR}"
|
||||
"Relative or absolute path for installing header files.")
|
||||
mfem_cache_path(INSTALL_BIN_DIR "${CMAKE_INSTALL_BINDIR}"
|
||||
"Relative or absolute path for installing the binaries.")
|
||||
mfem_cache_path(INSTALL_LIB_DIR "${CMAKE_INSTALL_LIBDIR}"
|
||||
"Relative or absolute path for installing the library.")
|
||||
mfem_cache_path(INSTALL_SHARE_DIR "${CMAKE_INSTALL_DATAROOTDIR}"
|
||||
"Relative or absolute path for installing shared data.")
|
||||
# other options: "share/mfem/cmake", "lib/mfem/cmake"
|
||||
mfem_cache_path(INSTALL_CMAKE_DIR "${INSTALL_LIB_DIR}/cmake/mfem"
|
||||
"Relative or absolute path for installing cmake config files.")
|
||||
|
||||
mfem_path_to_fullpath("${INSTALL_LIB_DIR}" "${CMAKE_INSTALL_PREFIX}" _lib_path)
|
||||
set(_lib_path "${CMAKE_INSTALL_PREFIX}/lib")
|
||||
set(CMAKE_INSTALL_RPATH_USE_LINK_PATH ON CACHE BOOL "")
|
||||
if(NOT DEFINED CMAKE_INSTALL_RPATH)
|
||||
set(CMAKE_INSTALL_RPATH "${_lib_path}")
|
||||
endif()
|
||||
if(NOT DEFINED CMAKE_INSTALL_NAME_DIR)
|
||||
set(CMAKE_INSTALL_NAME_DIR "${_lib_path}")
|
||||
endif()
|
||||
set(CMAKE_INSTALL_RPATH "${_lib_path}" CACHE PATH "")
|
||||
set(CMAKE_INSTALL_NAME_DIR "${_lib_path}" CACHE PATH "")
|
||||
|
||||
# Variables used when generating _config.hpp, and config.mk
|
||||
set(MFEM_SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR})
|
||||
set(MFEM_INSTALL_DIR ${CMAKE_INSTALL_PREFIX})
|
||||
set(MFEM_SOURCE_DIR ${CMAKE_CURRENT_SOURCE_DIR} CACHE PATH
|
||||
"The MFEM source directory" FORCE)
|
||||
set(MFEM_INSTALL_DIR ${CMAKE_INSTALL_PREFIX} CACHE PATH
|
||||
"The MFEM install directory" FORCE)
|
||||
|
||||
# Declaring the library
|
||||
mfem_add_library(mfem ${SOURCES} ${HEADERS} ${MASTER_HEADERS})
|
||||
@@ -704,34 +641,16 @@ if (NOT ("${PROJECT_SOURCE_DIR}" STREQUAL "${PROJECT_BINARY_DIR}"))
|
||||
foreach(Header mfem.hpp mfem-performance.hpp)
|
||||
message(STATUS
|
||||
"Writing substitute header --> \"${Header}\"")
|
||||
file(WRITE "${PROJECT_BINARY_DIR}/${Header}.tmp"
|
||||
file(WRITE "${PROJECT_BINARY_DIR}/${Header}"
|
||||
"// Auto-generated file.
|
||||
#define MFEM_CONFIG_FILE \"${PROJECT_BINARY_DIR}/config/_config.hpp\"
|
||||
#include \"${PROJECT_SOURCE_DIR}/${Header}\"
|
||||
")
|
||||
|
||||
execute_process(COMMAND ${CMAKE_COMMAND} -E copy_if_different
|
||||
"${PROJECT_BINARY_DIR}/${Header}.tmp"
|
||||
"${PROJECT_BINARY_DIR}/${Header}"
|
||||
)
|
||||
execute_process(COMMAND ${CMAKE_COMMAND} -E remove
|
||||
"${PROJECT_BINARY_DIR}/${Header}.tmp"
|
||||
)
|
||||
|
||||
# This version will be installed in the top include directory:
|
||||
file(WRITE "${PROJECT_BINARY_DIR}/InstallHeaders/${Header}.tmp"
|
||||
file(WRITE "${PROJECT_BINARY_DIR}/InstallHeaders/${Header}"
|
||||
"// Auto-generated file.
|
||||
#include \"mfem/${Header}\"
|
||||
")
|
||||
|
||||
execute_process(COMMAND ${CMAKE_COMMAND} -E copy_if_different
|
||||
"${PROJECT_BINARY_DIR}/InstallHeaders/${Header}.tmp"
|
||||
"${PROJECT_BINARY_DIR}/InstallHeaders/${Header}"
|
||||
)
|
||||
execute_process(COMMAND ${CMAKE_COMMAND} -E remove
|
||||
"${PROJECT_BINARY_DIR}/InstallHeaders/${Header}.tmp"
|
||||
)
|
||||
|
||||
endforeach()
|
||||
endif()
|
||||
|
||||
@@ -748,17 +667,11 @@ if (MFEM_ENABLE_TESTING)
|
||||
add_mfem_target(${MFEM_ALL_TESTS_TARGET_NAME} OFF)
|
||||
add_subdirectory(tests EXCLUDE_FROM_ALL)
|
||||
|
||||
if (MFEM_USE_BENCHMARK)
|
||||
# Create a target for all benchmarks and, optionally, enable it.
|
||||
set(MFEM_ALL_BENCHMARKS_TARGET_NAME benchmarks)
|
||||
add_mfem_target(${MFEM_ALL_BENCHMARKS_TARGET_NAME}
|
||||
${MFEM_ENABLE_BENCHMARKS})
|
||||
if (MFEM_ENABLE_BENCHMARKS)
|
||||
add_subdirectory(tests/benchmarks) #install benchmarks if enabled
|
||||
else()
|
||||
add_subdirectory(tests/benchmarks EXCLUDE_FROM_ALL)
|
||||
endif()
|
||||
endif()
|
||||
# Create a target for all benchmarks and, optionally, enable it.
|
||||
set(MFEM_ALL_BENCHMARKS_TARGET_NAME benchmarks)
|
||||
add_mfem_target(${MFEM_ALL_BENCHMARKS_TARGET_NAME}
|
||||
${MFEM_ENABLE_GOOGLE_BENCHMARKS})
|
||||
add_subdirectory(tests/benchmarks EXCLUDE_FROM_ALL)
|
||||
endif()
|
||||
|
||||
# Define a target that all examples and miniapps will depend on.
|
||||
@@ -777,11 +690,7 @@ endif()
|
||||
# Create a target for all miniapps and, optionally, enable it.
|
||||
set(MFEM_ALL_MINIAPPS_TARGET_NAME miniapps)
|
||||
add_mfem_target(${MFEM_ALL_MINIAPPS_TARGET_NAME} ${MFEM_ENABLE_MINIAPPS})
|
||||
if (MFEM_ENABLE_MINIAPPS)
|
||||
add_subdirectory(miniapps) #install miniapps if enabled
|
||||
else()
|
||||
add_subdirectory(miniapps EXCLUDE_FROM_ALL)
|
||||
endif()
|
||||
add_subdirectory(miniapps EXCLUDE_FROM_ALL)
|
||||
|
||||
# Target to build all executables, i.e. everything.
|
||||
add_custom_target(exec)
|
||||
@@ -831,6 +740,15 @@ add_subdirectory(doc)
|
||||
#-------------------------------------------------------------------------------
|
||||
|
||||
message(STATUS "CMAKE_INSTALL_PREFIX = ${CMAKE_INSTALL_PREFIX}")
|
||||
set(INSTALL_INCLUDE_DIR include
|
||||
CACHE PATH "Relative path for installing header files.")
|
||||
set(INSTALL_BIN_DIR bin
|
||||
CACHE PATH "Relative path for installing the binaries.")
|
||||
set(INSTALL_LIB_DIR lib
|
||||
CACHE PATH "Relative path for installing the library.")
|
||||
# other options: "share/mfem/cmake", "lib/mfem/cmake"
|
||||
set(INSTALL_CMAKE_DIR lib/cmake/mfem
|
||||
CACHE PATH "Relative path for installing cmake config files.")
|
||||
|
||||
target_include_directories(mfem BEFORE
|
||||
PUBLIC
|
||||
@@ -855,7 +773,7 @@ foreach(Header mfem.hpp mfem-performance.hpp)
|
||||
endforeach()
|
||||
install(FILES ${MASTER_HEADERS} DESTINATION ${INSTALL_INCLUDE_DIR}/mfem)
|
||||
|
||||
# Install the headers (except common miniapp which is installed from its subdir)
|
||||
# Install the headers; currently, the miniapps headers are excluded
|
||||
install(DIRECTORY ${MFEM_SOURCE_DIRS}
|
||||
DESTINATION ${INSTALL_INCLUDE_DIR}/mfem
|
||||
FILES_MATCHING PATTERN "*.hpp")
|
||||
|
||||
+1
-10
@@ -120,9 +120,7 @@ The MFEM source code has the following structure:
|
||||
| └── superlu
|
||||
├── fem
|
||||
│ ├── ceed
|
||||
│ ├── eltrans
|
||||
│ ├── fe
|
||||
│ ├── gslib
|
||||
│ ├── integ
|
||||
│ ├── lor
|
||||
│ ├── moonolith
|
||||
@@ -130,7 +128,6 @@ The MFEM source code has the following structure:
|
||||
│ └── tmop
|
||||
├── general
|
||||
├── linalg
|
||||
│ ├── batched
|
||||
│ └── simd
|
||||
├── mesh
|
||||
│ └── submesh
|
||||
@@ -154,8 +151,7 @@ The MFEM source code has the following structure:
|
||||
│ ├── solvers
|
||||
│ ├── spde
|
||||
│ ├── tools
|
||||
│ ├── toys
|
||||
│ └── tribol
|
||||
│ └── toys
|
||||
└── tests
|
||||
├── benchmarks
|
||||
├── convergence
|
||||
@@ -350,9 +346,6 @@ Before you can start, you need a GitHub account, here are a few suggestions:
|
||||
- Code specifics
|
||||
- All new public, protected, and private classes, methods, data members, and
|
||||
functions have Doxygen-style documentation in source comments.
|
||||
- Math formulas can be included in the Doxygen comments either with standard
|
||||
LaTeX (`$..$` and `$$..$$`) for portions that need detailed explanation, or with
|
||||
[Unicode](https://www.unicodeit.net/) or plain text when short or readable description is preferable.
|
||||
- In addition to arguments and functionality, documentation should include the
|
||||
current limitations of the code, any background information that is
|
||||
implicitly assumed in the implementation, and the ownership and lifetime
|
||||
@@ -366,8 +359,6 @@ Before you can start, you need a GitHub account, here are a few suggestions:
|
||||
conflicted files in the commit message.
|
||||
- All significant new features and changes should be documented in CHANGELOG.
|
||||
- New examples and miniapps should have documentation on the MFEM webpage.
|
||||
- The general floating-point type `real_t` should be used, rather than
|
||||
`float` or `double`, except in special cases where only one is possible.
|
||||
|
||||
|
||||
### Pull Requests
|
||||
|
||||
@@ -75,8 +75,6 @@ and miniapps. See https://glvis.org and https://mfem.org/building.
|
||||
|
||||
Quick start with GNU make
|
||||
=========================
|
||||
See also: https://mfem.org/building
|
||||
|
||||
Serial build:
|
||||
make serial -j 4
|
||||
|
||||
@@ -85,7 +83,6 @@ Parallel build:
|
||||
(build METIS 4 in ../metis-4.0 relative to mfem/)
|
||||
(build hypre in ../hypre relative to mfem/)
|
||||
make parallel -j 4
|
||||
(For METIS 5, see https://mfem.org/building/#parallel-build-using-metis-5)
|
||||
|
||||
CUDA build:
|
||||
make cuda -j 4
|
||||
@@ -119,17 +116,11 @@ Parallel build:
|
||||
mkdir <mfem-build-dir> ; cd <mfem-build-dir>
|
||||
cmake <mfem-source-dir> -DMFEM_USE_MPI=YES
|
||||
make -j 4
|
||||
(For METIS 5, see https://mfem.org/building/#parallel-build-using-metis-5)
|
||||
|
||||
CUDA build:
|
||||
(this build requires CMake 3.17 or newer)
|
||||
(this build requires CMake 3.8 or newer)
|
||||
mkdir <mfem-build-dir> ; cd <mfem-build-dir>
|
||||
cmake <mfem-source-dir> -DMFEM_USE_CUDA=YES -DCUDA_ARCH=sm_70
|
||||
make -j 4
|
||||
|
||||
HIP build:
|
||||
mkdir <mfem-build-dir> ; cd <mfem-build-dir>
|
||||
cmake <mfem-source-dir> -DMFEM_USE_HIP=YES -DHIP_ARCH=gfx942 -DCMAKE_CXX_COMPILER=amdclang++ -DCMAKE_HIP_COMPILER=amdclang++
|
||||
cmake <mfem-source-dir> -DMFEM_USE_CUDA=YES
|
||||
make -j 4
|
||||
|
||||
Example codes (serial/parallel, depending on the build):
|
||||
@@ -225,10 +216,9 @@ An optional installation of the library and the headers can be performed with
|
||||
|
||||
make install [PREFIX=<dir>]
|
||||
|
||||
The library will be installed in ${PREFIX}/lib, the headers in
|
||||
${PREFIX}/include, and the configuration and testing makefiles (config.mk and
|
||||
test.mk) in ${PREFIX}/share/mfem. The PREFIX option can also be set during
|
||||
configuration.
|
||||
The library will be installed in $(PREFIX)/lib, the headers in
|
||||
$(PREFIX)/include, and the configuration makefile (config.mk) in
|
||||
$(PREFIX)/share/mfem. The PREFIX option can also be set during configuration.
|
||||
|
||||
Information about the current build configuration can be viewed using
|
||||
|
||||
@@ -277,16 +267,9 @@ Build options:
|
||||
|
||||
Installation options:
|
||||
PREFIX - Specify the installation directory. The library (libmfem.a) will be
|
||||
installed in ${PREFIX}/lib, the headers in ${PREFIX}/include, and
|
||||
the configuration and testing makefiles (config.mk and test.mk) in
|
||||
${PREFIX}/share/mfem.
|
||||
INSTALL - Specify the install program, default = /usr/bin/install
|
||||
INSTALL_DEF_PERM - Specify the default install permissions. This affects
|
||||
headers and configuration makefiles, default = 644
|
||||
INSTALL_BIN_PERM - Specify the install permissions for binaries. This only
|
||||
affects the shared version of the library, default = 755
|
||||
INSTALL_DIR_PERM - Specify the install permissions for directories and,
|
||||
on macOS/BSD, for symlinks as well, default = 755
|
||||
installed in $(PREFIX)/lib, the headers in $(PREFIX)/include, and
|
||||
the configuration makefile (config.mk) in $(PREFIX)/share/mfem.
|
||||
INSTALL - Specify the install program, e.g /usr/bin/install
|
||||
|
||||
MFEM library features/options (GNU make)
|
||||
----------------------------------------
|
||||
@@ -301,15 +284,6 @@ MFEM_USE_METIS = YES/NO
|
||||
option in the library will be Cartesian partitioning with box meshes, and
|
||||
thus most of the parallel examples and miniapps will fail.
|
||||
|
||||
MFEM_PRECISION = double/Double/DOUBLE/single/Single/SINGLE
|
||||
Use single (float type) or double floating-point precision. In the
|
||||
configuration header 'config/_config.hpp' this option is represented by
|
||||
defining exactly one of the macros: MFEM_USE_DOUBLE, or MFEM_USE_SINGLE.
|
||||
In the exported config files 'config.mk' and 'MFEMConfig.cmake', the option
|
||||
is represented by the variables MFEM_USE_DOUBLE and MFEM_USE_SINGLE defined
|
||||
as YES/NO (make) or ON/OFF (cmake). For more details see
|
||||
https://github.com/orgs/mfem/discussions/4207
|
||||
|
||||
MFEM_DEBUG = YES/NO
|
||||
Choose debug/optimized build. The debug build enables a number of messages
|
||||
and consistency checks that may simplify bug-hunting.
|
||||
@@ -401,11 +375,6 @@ MFEM_USE_AMGX = YES/NO
|
||||
Allows the user to use SparseMatrices and HypreParMatrices to solve linear
|
||||
systems with the routines from the AmgX library.
|
||||
|
||||
MFEM_USE_MAGMA = YES/NO
|
||||
Enable MFEM functionality based on the MAGMA high-performance linear algebra
|
||||
library. The MAGMA library provides a BLAS/LAPACK interface, with
|
||||
implementations that have been optimized for Nvidia and AMD GPUs.
|
||||
|
||||
MFEM_USE_GNUTLS = YES/NO
|
||||
Enable secure socket support in class socketstream, using the auxiliary
|
||||
GnuTLS_* classes, based on the GnuTLS library. This option may be useful in
|
||||
@@ -509,14 +478,10 @@ MFEM_USE_CODIPACK = YES/NO
|
||||
MFEM_USE_ALGOIM = YES/NO
|
||||
Enable the usage of Algoim - a collection of high-order accurate numerical
|
||||
methods and C++ algorithms for working with implicitly-defined geometry and
|
||||
level set methods, see https://algoim.github.io. MFEM provides interface to
|
||||
Algoim v1. To check out the specific Algoim state use:
|
||||
https://github.com/algoim/algoim
|
||||
level set methods. The Algoim library requires the Blitz++ library. The MFEM
|
||||
provides interface to Algoim v1. Thus, to check out the specific state use:
|
||||
git checkout 9c9ca0ef094d8ab0390ed36367a1151b459bbe0a
|
||||
The Algoim library requires the Blitz++ library. To use the latest state of
|
||||
Blitz++ that has been tested with MFEM, use:
|
||||
https://github.com/blitzpp/blitz
|
||||
git checkout f24a250a43dff88c31ad92916da828b7ea9a98b7
|
||||
https://algoim.github.io
|
||||
|
||||
MFEM_USE_ADFORWARD = YES/NO
|
||||
Enable forward mode for AD packages. This option is valid
|
||||
@@ -597,11 +562,6 @@ MFEM_USE_PARELAG = YES/NO
|
||||
use ParELAG. In fact, ParELAG is dependent on MFEM. Therefore, this option
|
||||
currently only concerns the miniapps.
|
||||
|
||||
MFEM_USE_TRIBOL = YES/NO
|
||||
Enables the miniapps that use the Tribol library. MFEM does not currently
|
||||
use Tribol. In fact, Tribol is dependent on MFEM. Therefore, this option
|
||||
currently only concerns the miniapps.
|
||||
|
||||
MFEM_USE_ENZYME = YES/NO
|
||||
Enables automatic differentiation support through the LLVM plugin Enzyme.
|
||||
This requires the compiler to be set to clang (>=14.0.0). We also advise to
|
||||
@@ -638,13 +598,9 @@ The specific libraries and their options are:
|
||||
HYPRE >= 2.20.0 (HYPRE built with '--enable-mixedint')
|
||||
HYPRE >= 2.22.1 (HYPRE built with CUDA)
|
||||
HYPRE >= 2.23.0 (HYPRE built with HIP)
|
||||
HYPRE >= 2.31.0 (runtime selectable HYPRE execution on CPU/GPU)
|
||||
|
||||
- METIS, used when MFEM_USE_METIS = YES. If using METIS 5, set
|
||||
MFEM_USE_METIS_5 = YES (default is to use METIS 4). For building instructions,
|
||||
see the following:
|
||||
- METIS 4.0.3: https://mfem.org/building/#parallel-mpi-version-of-mfem
|
||||
- METIS 5.1.0: https://mfem.org/building/#parallel-build-using-metis-5
|
||||
MFEM_USE_METIS_5 = YES (default is to use METIS 4).
|
||||
URL: https://github.com/mfem/tpls (MFEM mirror, see above)
|
||||
Options: METIS_OPT, METIS_LIB.
|
||||
Versions: METIS 4.0.3 or 5.1.0.
|
||||
@@ -703,29 +659,25 @@ The specific libraries and their options are:
|
||||
requires the PT-Scotch and Scalapack libraries as well as ParMETIS, which
|
||||
includes METIS 5 in its distribution. Starting with STRUMPACK v2.2.0, ParMETIS
|
||||
and PT-Scotch are optional dependencies.
|
||||
The support for STRUMPACK was added in MFEM v3.3.2.
|
||||
The support for STRUMPACK was added in MFEM v3.3.2 and it requires STRUMPACK
|
||||
2.0.0 or later.
|
||||
URL: http://portal.nersc.gov/project/sparse/strumpack
|
||||
Options: STRUMPACK_OPT, STRUMPACK_LIB.
|
||||
Versions: STRUMPACK >= 3.0.0.
|
||||
|
||||
- Ginkgo (optional), used when MFEM_USE_GINKGO = YES. Note that Ginkgo needs a
|
||||
C++ compiler that supports the C++-17 standard. For additional requirements
|
||||
C++ compiler that supports the C++-14 standard. For additional requirements
|
||||
and dependencies of specific modules, see the Ginkgo webpage below.
|
||||
URL: https://ginkgo-project.github.io
|
||||
Options: GINKGO_OPT, GINKGO_LIB, GINKGO_DIR, GINKGO_BUILD_TYPE (Release or
|
||||
Debug).
|
||||
Versions: Ginkgo >= 1.9.0.
|
||||
Versions: Ginkgo >= 1.4.0.
|
||||
|
||||
- AmgX (optional), used when MFEM_USE_AMGX = YES.
|
||||
URL: https://github.com/NVIDIA/AMGX
|
||||
Options: AMGX_OPT, AMGX_LIB.
|
||||
Versions: AmgX >= 2.1, older versions may work too.
|
||||
|
||||
- MAGMA (optional), used with MFEM_USE_MAGMA = YES.
|
||||
URL: https://icl.utk.edu/magma/
|
||||
Options: MAGMA_OPT, MAGMA_LIB
|
||||
Versions: MAGMA >= 2.8.0
|
||||
|
||||
- GnuTLS (optional), used when MFEM_USE_GNUTLS = YES. On most Linux systems,
|
||||
GnuTLS is available as a development package, e.g. gnutls-devel. On Mac OS X,
|
||||
one can get the library through the Homebrew package manager (http://brew.sh).
|
||||
@@ -741,10 +693,9 @@ The specific libraries and their options are:
|
||||
Options: NETCDF_OPT, NETCDF_LIB.
|
||||
Versions: NetCDF >= 4.4.0.
|
||||
|
||||
- PETSc (optional), used when MFEM_USE_PETSC = YES. Version 3.21 or higher of
|
||||
the PETSC dev branch is required, though depending on the functionality older
|
||||
versions may work too. The MFEM and PETSc builds can share common libraries,
|
||||
e.g., hypre and SUNDIALS. Here's an example configuration, assuming
|
||||
- PETSc (optional), used when MFEM_USE_PETSC = YES. Version 3.8 or higher of
|
||||
the PETSC dev branch is required. The MFEM and PETSc builds can share common
|
||||
libraries, e.g., hypre and SUNDIALS. Here's an example configuration, assuming
|
||||
PETSc has been cloned on the same level as mfem and hypre:
|
||||
./configure --download-fblaslapack=yes --download-scalapack=yes \
|
||||
--download-mumps=yes --download-suitesparse=yes \
|
||||
@@ -754,7 +705,9 @@ The specific libraries and their options are:
|
||||
CFLAGS to allow proper parsing of the hipsparse header under C.
|
||||
URL: https://www.mcs.anl.gov/petsc
|
||||
Options: PETSC_OPT, PETSC_LIB.
|
||||
Versions: PETSc >= 3.21.0, older versions may work too.
|
||||
Versions: PETSc >= 3.8.0 (PETSc build without CUDA/HIP)
|
||||
PETSc >= 3.15.0 (PETSc built with CUDA)
|
||||
PETSc >= 3.19.0 (PETSc built with HIP, older versions may work too)
|
||||
|
||||
- SLEPc (optional), used when MFEM_USE_SLEPC = YES. SLEPc depends on PETSc and
|
||||
uses some of the PETSc options when compiled.
|
||||
@@ -798,14 +751,14 @@ The specific libraries and their options are:
|
||||
Versions: 1.9.3
|
||||
|
||||
- GSLIB (optional), used when MFEM_USE_GSLIB = YES. The gslib library must be
|
||||
built prior to the MFEM build, as follows: download gslib-1.0.9, untar it at
|
||||
the same level as MFEM and create a symbolic link: "ln -s gslib-1.0.9 gslib".
|
||||
built prior to the MFEM build, as follows: download gslib-1.0.7, untar it at
|
||||
the same level as MFEM and create a symbolic link: "ln -s gslib-1.0.7 gslib".
|
||||
Build gslib in parallel or in serial based on the desired MFEM build: "make
|
||||
clean; make CC=mpicc" or "make clean; make CC=gcc MPI=0". Build MFEM with
|
||||
MFEM_USE_GSLIB=YES.
|
||||
URL: https://github.com/gslib/gslib/archive/v1.0.9.tar.gz
|
||||
URL: https://github.com/gslib/gslib/archive/v1.0.7.tar.gz
|
||||
Options: GSLIB_OPT, GSLIB_LIB.
|
||||
Versions: GSLIB >= 1.0.9.
|
||||
Versions: GSLIB >= 1.0.7.
|
||||
|
||||
- ALGOIM (optional), used when MFEM_USE_ALGOIM=YES. The library provides only
|
||||
headers so it just needs to be downloaded at the same level as MFEM. Download
|
||||
@@ -844,7 +797,7 @@ The specific libraries and their options are:
|
||||
URL: https://github.com/CEED/libCEED
|
||||
https://ceed.exascaleproject.org/libceed
|
||||
Options: CEED_DIR, CEED_OPT, CEED_LIB.
|
||||
Versions: libCEED >= 0.12.
|
||||
Versions: libCEED >= 0.10.
|
||||
|
||||
- RAJA (optional), used when MFEM_USE_RAJA = YES.
|
||||
Beginning with MFEM v4.5.1, only RAJA v2022.10.3+ is supported.
|
||||
@@ -897,10 +850,6 @@ The specific libraries and their options are:
|
||||
URL: https://github.com/LLNL/parelag
|
||||
Options: PARELAG_DIR, PARELAG_OPT, PARELAG_LIB.
|
||||
|
||||
- Tribol, used when MFEM_USE_TRIBOL = YES.
|
||||
URL: https://github.com/LLNL/Tribol
|
||||
Options: TRIBOL_DIR, TRIBOL_OPT, TRIBOL_LIB.
|
||||
|
||||
- Enzyme, used when MFEM_USE_ENZYME = YES. Requires LLVM/Clang >= 14.0.0.
|
||||
URL: https://github.com/EnzymeAD/Enzyme
|
||||
Options: ENZYME_DIR, ENZYME_OPT, ENZYME_LIB.
|
||||
@@ -987,27 +936,15 @@ or
|
||||
cmake --build . --config Release --target install [Xcode]
|
||||
cmake --build . --config Release --target INSTALL [Visual Studio]
|
||||
|
||||
By default, the library will be installed in ${CMAKE_INSTALL_PREFIX}/lib, the
|
||||
headers in ${CMAKE_INSTALL_PREFIX}/include, the configuration CMake files in
|
||||
${CMAKE_INSTALL_PREFIX}/lib/cmake/mfem, and the configuration and testing GNU
|
||||
make files in ${CMAKE_INSTALL_PREFIX}/share/mfem. For fine-tuning the
|
||||
installation directories the following variables can be used:
|
||||
INSTALL_INCLUDE_DIR, INSTALL_LIB_DIR, INSTALL_BIN_DIR (e.g. for dll files on
|
||||
Windows), INSTALL_SHARE_DIR, and INSTALL_CMAKE_DIR; alternatively, with lower
|
||||
precedence, the CMake GNUInstallDirs variables can also be used:
|
||||
CMAKE_INSTALL_INCLUDEDIR, CMAKE_INSTALL_LIBDIR, CMAKE_INSTALL_BINDIR and
|
||||
CMAKE_INSTALL_DATAROOTDIR. Note that the default for INSTALL_LIB_DIR and
|
||||
CMAKE_INSTALL_LIBDIR is lib. This is in contrast to the default behavior for
|
||||
GNUInstallDirs, which defines a platform-dependent default value for
|
||||
CMAKE_INSTALL_LIBDIR (lib or lib64 or lib/<multiarch-tuple> on Debian). To
|
||||
restore this behavior, the user can set MFEM_USE_GNUINSTALLDIRS=YES.
|
||||
The library will be installed in <PREFIX>/lib, the headers in <PREFIX>/include,
|
||||
and the configuration CMake files in <PREFIX>/lib/cmake/mfem.
|
||||
|
||||
|
||||
Configuration variables (CMake)
|
||||
===============================
|
||||
See the configuration file config/defaults.cmake for the default settings.
|
||||
|
||||
Note: the option MFEM_USE_CUDA requires CMake version 3.17 or newer!
|
||||
Note: the option MFEM_USE_CUDA requires CMake version 3.8 or newer!
|
||||
|
||||
Non-standard CMake variables for compilers:
|
||||
CXX - If set, overwrite the auto-detected C++ compiler, serial build
|
||||
@@ -1023,7 +960,6 @@ The following options are equivalent to the GNU make options with the same name:
|
||||
|
||||
MFEM_USE_MPI
|
||||
MFEM_USE_METIS - Set to ${MFEM_USE_MPI}, can be overwritten.
|
||||
MFEM_PRECISION
|
||||
MFEM_USE_LIBUNWIND
|
||||
MFEM_USE_LAPACK
|
||||
MFEM_THREAD_SAFE
|
||||
@@ -1057,7 +993,6 @@ MFEM_USE_CALIPER
|
||||
MFEM_USE_FMS
|
||||
MFEM_USE_BENCHMARK
|
||||
MFEM_USE_PARELAG
|
||||
MFEM_USE_TRIBOL
|
||||
MFEM_USE_ENZYME
|
||||
|
||||
The following options are CMake specific:
|
||||
@@ -1166,19 +1101,6 @@ larger problems, there are two options:
|
||||
1. Building hypre with '--enable-bigint' defines the local and global indices to
|
||||
be 64-bit. This is convenient, but requires more memory than necessary.
|
||||
|
||||
2. Building hypre with '--enable-mixedint' defines the local indices to be
|
||||
2. Building hypre with '--enable-mixedint' defines the local indiced to be
|
||||
32-bit, while using a 64-bit storage for global indices. This option is
|
||||
currently tested only in ex1p, and may not work in more general settings.
|
||||
|
||||
Specific options for HIP
|
||||
========================
|
||||
MFEM expects the `ROCM_PATH` environment variable to be set to the path of the
|
||||
ROCM install, as well as having `$ROCM_PATH/bin` in `PATH`.
|
||||
|
||||
Specific options for RAJA+HIP+MPI
|
||||
=================================
|
||||
RAJA uses CMake's built-in HIP support (added in CMake 3.21), while MFEM uses
|
||||
the older HIP C++ library build/linkage. To ensure proper build and linkage
|
||||
check that `CMAKE_CXX_COMPILER` and `CMAKE_HIP_COMPILER` are set to the same
|
||||
compiler. This is especially important when using an MPI compiler (for example
|
||||
crayCC) where some linker flags may get dropped if these two are not identical.
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
BSD 3-Clause License
|
||||
|
||||
Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC
|
||||
Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC
|
||||
All rights reserved.
|
||||
|
||||
Redistribution and use in source and binary forms, with or without
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -287,7 +287,3 @@ ENDIF()
|
||||
IF (DEFINED TPL_ENABLE_PARELAG)
|
||||
SET(MFEM_USE_PARELAG ${TPL_ENABLE_PARELAG} CACHE BOOL "Enable ParELAG" FORCE)
|
||||
ENDIF()
|
||||
|
||||
IF (DEFINED TPL_ENABLE_TRIBOL)
|
||||
SET(MFEM_USE_TRIBOL ${TPL_ENABLE_TRIBOL} CACHE BOOL "Enable Tribol" FORCE)
|
||||
ENDIF()
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -18,8 +18,6 @@ set(MFEM_GIT_STRING "@MFEM_GIT_STRING@")
|
||||
set(MFEM_USE_MPI @MFEM_USE_MPI@)
|
||||
set(MFEM_USE_METIS @MFEM_USE_METIS@)
|
||||
set(MFEM_USE_METIS_5 @MFEM_USE_METIS_5@)
|
||||
set(MFEM_USE_DOUBLE @MFEM_USE_DOUBLE@)
|
||||
set(MFEM_USE_SINGLE @MFEM_USE_SINGLE@)
|
||||
set(MFEM_DEBUG @MFEM_DEBUG@)
|
||||
set(MFEM_USE_EXCEPTIONS @MFEM_USE_EXCEPTIONS@)
|
||||
set(MFEM_USE_ZLIB @MFEM_USE_ZLIB@)
|
||||
@@ -37,7 +35,6 @@ set(MFEM_USE_MUMPS @MFEM_USE_MUMPS@)
|
||||
set(MFEM_USE_STRUMPACK @MFEM_USE_STRUMPACK@)
|
||||
set(MFEM_USE_GINKGO @MFEM_USE_GINKGO@)
|
||||
set(MFEM_USE_AMGX @MFEM_USE_AMGX@)
|
||||
set(MFEM_USE_MAGMA @MFEM_USE_MAGMA@)
|
||||
set(MFEM_USE_HIOP @MFEM_USE_HIOP@)
|
||||
set(MFEM_USE_GNUTLS @MFEM_USE_GNUTLS@)
|
||||
set(MFEM_USE_GSLIB @MFEM_USE_GSLIB@)
|
||||
@@ -50,7 +47,6 @@ set(MFEM_USE_FMS @MFEM_USE_FMS@)
|
||||
set(MFEM_USE_CONDUIT @MFEM_USE_CONDUIT@)
|
||||
set(MFEM_USE_PUMI @MFEM_USE_PUMI@)
|
||||
set(MFEM_USE_CUDA @MFEM_USE_CUDA@)
|
||||
set(MFEM_USE_HIP @MFEM_USE_HIP@)
|
||||
set(MFEM_USE_OCCA @MFEM_USE_OCCA@)
|
||||
set(MFEM_USE_RAJA @MFEM_USE_RAJA@)
|
||||
set(MFEM_USE_CEED @MFEM_USE_CEED@)
|
||||
@@ -66,7 +62,6 @@ set(MFEM_USE_CALIPER @MFEM_USE_CALIPER@)
|
||||
set(MFEM_USE_ALGOIM @MFEM_USE_ALGOIM@)
|
||||
set(MFEM_USE_BENCHMARK @MFEM_USE_BENCHMARK@)
|
||||
set(MFEM_USE_PARELAG @MFEM_USE_PARELAG@)
|
||||
set(MFEM_USE_TRIBOL @MFEM_USE_TRIBOL@)
|
||||
set(MFEM_USE_ENZYME @MFEM_USE_ENZYME@)
|
||||
|
||||
set(MFEM_CXX_COMPILER "@CMAKE_CXX_COMPILER@")
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
@@ -46,12 +46,6 @@
|
||||
// Requires an MPI compiler, and the libraries HYPRE and METIS.
|
||||
#cmakedefine MFEM_USE_MPI
|
||||
|
||||
// Use double-precision floating point type
|
||||
#cmakedefine MFEM_USE_DOUBLE
|
||||
|
||||
// Use single-precision floating point type
|
||||
#cmakedefine MFEM_USE_SINGLE
|
||||
|
||||
// Enable debug checks in MFEM.
|
||||
#cmakedefine MFEM_DEBUG
|
||||
|
||||
@@ -114,9 +108,6 @@
|
||||
// Enable MFEM functionality based on the AmgX library.
|
||||
#cmakedefine MFEM_USE_AMGX
|
||||
|
||||
// Enable MFEM functionality based on the MAGMA library.
|
||||
#cmakedefine MFEM_USE_MAGMA
|
||||
|
||||
// Enable secure socket streams based on the GNUTLS library.
|
||||
#cmakedefine MFEM_USE_GNUTLS
|
||||
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -18,13 +18,4 @@ include(MfemCmakeUtilities)
|
||||
# Note: components are enabled based on the find_package() parameters.
|
||||
mfem_find_package(Axom AXOM AXOM_DIR "include" "" "lib" ""
|
||||
"Paths to headers required by Axom." "Libraries required by Axom."
|
||||
ADD_COMPONENT core "include" axom/core.hpp "lib" axom_core
|
||||
ADD_COMPONENT inlet "include" axom/inlet.hpp "lib" axom_inlet
|
||||
ADD_COMPONENT klee "include" axom/klee.hpp "lib" axom_klee
|
||||
ADD_COMPONENT lumberjack "include" axom/lumberjack.hpp "lib" axom_lumberjack
|
||||
ADD_COMPONENT mint "include" axom/mint.hpp "lib" axom_mint
|
||||
ADD_COMPONENT multimat "include" axom/multimat.hpp "lib" axom_multimat
|
||||
ADD_COMPONENT quest "include" axom/quest.hpp "lib" axom_quest
|
||||
ADD_COMPONENT sidre "include" axom/sidre.hpp "lib" axom_sidre
|
||||
ADD_COMPONENT slam "include" axom/slam.hpp "lib" axom_slam
|
||||
ADD_COMPONENT slic "include" axom/slic.hpp "lib" axom_slic)
|
||||
ADD_COMPONENT Axom "include" axom/config.hpp "lib" axom)
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -36,11 +36,7 @@ include(MfemCmakeUtilities)
|
||||
mfem_find_package(Conduit CONDUIT CONDUIT_DIR
|
||||
"include;include/conduit" conduit.hpp "lib" conduit
|
||||
"Paths to headers required by Conduit." "Libraries required by Conduit."
|
||||
ADD_COMPONENT blueprint
|
||||
"include;include/conduit" conduit_blueprint.hpp "lib" conduit_blueprint
|
||||
ADD_COMPONENT blueprint_mpi
|
||||
"include;include/conduit" conduit_blueprint_mpi.hpp "lib" conduit_blueprint_mpi
|
||||
ADD_COMPONENT relay
|
||||
"include;include/conduit" conduit_relay.hpp "lib" conduit_relay
|
||||
ADD_COMPONENT relay_mpi
|
||||
"include;include/conduit" conduit_relay_mpi.hpp "lib" conduit_relay_mpi)
|
||||
ADD_COMPONENT blueprint
|
||||
"include;include/conduit" conduit_blueprint.hpp "lib" conduit_blueprint)
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -14,42 +14,19 @@
|
||||
# - HYPRE_LIBRARIES
|
||||
# - HYPRE_INCLUDE_DIRS
|
||||
# - HYPRE_VERSION
|
||||
# - HYPRE_USING_CUDA (internal)
|
||||
# - HYPRE_USING_HIP (internal)
|
||||
|
||||
if (HYPRE_FOUND)
|
||||
if (HYPRE_USING_CUDA)
|
||||
find_package(CUDAToolkit REQUIRED)
|
||||
endif()
|
||||
if (HYPRE_USING_HIP)
|
||||
find_package(rocsparse REQUIRED)
|
||||
find_package(rocrand REQUIRED)
|
||||
endif()
|
||||
if (HYPRE_LIBRARIES AND HYPRE_INCLUDE_DIRS AND HYPRE_VERSION)
|
||||
find_package_handle_standard_args(HYPRE
|
||||
REQUIRED_VARS HYPRE_LIBRARIES HYPRE_INCLUDE_DIRS HYPRE_VERSION
|
||||
)
|
||||
return()
|
||||
endif()
|
||||
return()
|
||||
endif()
|
||||
|
||||
include(MfemCmakeUtilities)
|
||||
mfem_find_package(HYPRE HYPRE HYPRE_DIR "include" "HYPRE.h" "lib" "HYPRE"
|
||||
"Paths to headers required by HYPRE." "Libraries required by HYPRE."
|
||||
CHECK_BUILD HYPRE_USING_CUDA FALSE
|
||||
"
|
||||
#undef HYPRE_USING_CUDA
|
||||
#include <HYPRE_config.h>
|
||||
|
||||
#ifndef HYPRE_USING_CUDA
|
||||
#error HYPRE is built without CUDA.
|
||||
#endif
|
||||
|
||||
int main()
|
||||
{
|
||||
return 0;
|
||||
}
|
||||
"
|
||||
CHECK_BUILD HYPRE_USING_HIP FALSE
|
||||
"
|
||||
#undef HYPRE_USING_HIP
|
||||
@@ -80,19 +57,6 @@ if (HYPRE_FOUND AND (NOT HYPRE_VERSION))
|
||||
endif()
|
||||
endif()
|
||||
|
||||
if (HYPRE_FOUND AND HYPRE_USING_CUDA)
|
||||
find_package(CUDAToolkit REQUIRED)
|
||||
# Initialize CUSPARSE_LIBRARIES, CURAND_LIBRARIES, and CUBLAS_LIBRARIES:
|
||||
mfem_culib_set_libraries(CUSPARSE cusparse)
|
||||
mfem_culib_set_libraries(CURAND curand)
|
||||
mfem_culib_set_libraries(CUBLAS cublas)
|
||||
list(APPEND HYPRE_LIBRARIES ${CUSPARSE_LIBRARIES} ${CURAND_LIBRARIES}
|
||||
${CUBLAS_LIBRARIES})
|
||||
set(HYPRE_LIBRARIES ${HYPRE_LIBRARIES} CACHE STRING
|
||||
"HYPRE libraries + dependencies." FORCE)
|
||||
message(STATUS "Updated HYPRE_LIBRARIES: ${HYPRE_LIBRARIES}")
|
||||
endif()
|
||||
|
||||
if (HYPRE_FOUND AND HYPRE_USING_HIP)
|
||||
find_package(rocsparse REQUIRED)
|
||||
find_package(rocrand REQUIRED)
|
||||
@@ -101,7 +65,3 @@ if (HYPRE_FOUND AND HYPRE_USING_HIP)
|
||||
"HYPRE libraries + dependencies." FORCE)
|
||||
message(STATUS "Updated HYPRE_LIBRARIES: ${HYPRE_LIBRARIES}")
|
||||
endif()
|
||||
|
||||
find_package_handle_standard_args(HYPRE
|
||||
REQUIRED_VARS HYPRE_LIBRARIES HYPRE_INCLUDE_DIRS HYPRE_VERSION
|
||||
)
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,39 +0,0 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
# This file is part of the MFEM library. For more information and source code
|
||||
# availability visit https://mfem.org.
|
||||
#
|
||||
# MFEM is free software; you can redistribute it and/or modify it under the
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
# Defines the following variables:
|
||||
# - MAGMA_FOUND
|
||||
# - MAGMA_LIBRARIES
|
||||
# - MAGMA_INCLUDE_DIRS
|
||||
|
||||
include(MfemCmakeUtilities)
|
||||
mfem_find_package(MAGMA MAGMA MAGMA_DIR "include" "magma.h" "lib" "magma"
|
||||
"Paths to headers required by MAGMA." "Libraries required by MAGMA.")
|
||||
|
||||
if (MAGMA_FOUND AND MFEM_USE_CUDA)
|
||||
find_package(CUDAToolkit REQUIRED)
|
||||
# Initialize CUSPARSE_LIBRARIES and CUBLAS_LIBRARIES:
|
||||
mfem_culib_set_libraries(CUSPARSE cusparse)
|
||||
mfem_culib_set_libraries(CUBLAS cublas)
|
||||
list(APPEND MAGMA_LIBRARIES ${CUSPARSE_LIBRARIES} ${CUBLAS_LIBRARIES})
|
||||
set(MAGMA_LIBRARIES ${MAGMA_LIBRARIES} CACHE STRING
|
||||
"MAGMA libraries + dependencies." FORCE)
|
||||
message(STATUS "Updated MAGMA_LIBRARIES: ${MAGMA_LIBRARIES}")
|
||||
endif()
|
||||
|
||||
if (MAGMA_FOUND AND MFEM_USE_HIP)
|
||||
find_package(HIPBLAS REQUIRED)
|
||||
find_package(HIPSPARSE REQUIRED)
|
||||
list(APPEND MAGMA_LIBRARIES ${HIPBLAS_LIBRARIES} ${HIPSPARSE_LIBRARIES})
|
||||
set(MAGMA_LIBRARIES ${MAGMA_LIBRARIES} CACHE STRING
|
||||
"MAGMA libraries + dependencies." FORCE)
|
||||
message(STATUS "Updated MAGMA_LIBRARIES: ${MAGMA_LIBRARIES}")
|
||||
endif()
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -16,22 +16,12 @@
|
||||
# - MUMPS_VERSION
|
||||
|
||||
include(MfemCmakeUtilities)
|
||||
|
||||
# Toggle which precision of MUMPS to use depending on the precision of MFEM.
|
||||
if (MFEM_USE_DOUBLE)
|
||||
set(_mumps_header dmumps_c.h)
|
||||
set(_mumps_lib dmumps)
|
||||
elseif(MFEM_USE_SINGLE)
|
||||
set(_mumps_header smumps_c.h)
|
||||
set(_mumps_lib smumps)
|
||||
endif()
|
||||
|
||||
mfem_find_package(MUMPS MUMPS MUMPS_DIR
|
||||
"include" ${_mumps_header} "lib" ${_mumps_lib}
|
||||
"include" dmumps_c.h "lib" dmumps
|
||||
"Paths to headers required by MUMPS."
|
||||
"Libraries required by MUMPS."
|
||||
ADD_COMPONENT mumps_common "include" ${_mumps_header} "lib" mumps_common
|
||||
ADD_COMPONENT pord "include" ${_mumps_header} "lib" pord)
|
||||
ADD_COMPONENT mumps_common "include" dmumps_c.h "lib" mumps_common
|
||||
ADD_COMPONENT pord "include" dmumps_c.h "lib" pord)
|
||||
|
||||
if (MUMPS_FOUND AND (NOT MUMPS_VERSION))
|
||||
try_run(MUMPS_VERSION_RUN_RESULT MUMPS_VERSION_COMPILE_RESULT
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -117,8 +117,8 @@ macro (MULTIPASS_SOURCE_RUNS includes libraries source runs language)
|
||||
math (EXPR _tmp "${MULTIPASS_TEST_COUNT} + 1") # Why can't I add to a cache variable?
|
||||
set (MULTIPASS_TEST_COUNT ${_tmp} CACHE INTERNAL "Unique test ID")
|
||||
set (testname MULTIPASS_TEST_${MULTIPASS_TEST_COUNT}_${runs})
|
||||
set (CMAKE_REQUIRED_INCLUDES ${includes} ${MPI_${language}_INCLUDE_PATH})
|
||||
set (CMAKE_REQUIRED_LIBRARIES ${libraries} ${MPI_${language}_LIBRARIES})
|
||||
set (CMAKE_REQUIRED_INCLUDES ${includes})
|
||||
set (CMAKE_REQUIRED_LIBRARIES ${libraries})
|
||||
if(${language} STREQUAL "C")
|
||||
check_c_source_runs ("${source}" ${testname})
|
||||
elseif(${language} STREQUAL "CXX")
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -14,7 +14,7 @@
|
||||
# - SLEPC_INCLUDE_DIRS
|
||||
# - SLEPC_LIBRARIES
|
||||
|
||||
set(SLEPc_REQUIRED_PACKAGES "PETSC" "MPI" CACHE STRING
|
||||
set(SLEPc_REQUIRED_PACKAGES "PETSC" CACHE STRING
|
||||
"Additional packages required by SLEPc")
|
||||
|
||||
include(MfemCmakeUtilities)
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -31,5 +31,4 @@ mfem_find_package(SUNDIALS SUNDIALS SUNDIALS_DIR
|
||||
ADD_COMPONENT CVODE "include" cvode/cvode.h "lib" sundials_cvode
|
||||
ADD_COMPONENT CVODES "include" cvodes/cvodes.h "lib" sundials_cvodes
|
||||
ADD_COMPONENT ARKODE "include" arkode/arkode.h "lib" sundials_arkode
|
||||
ADD_COMPONENT KINSOL "include" kinsol/kinsol.h "lib" sundials_kinsol
|
||||
ADD_COMPONENT Core "include" sundials/sundials_core.h "lib" sundials_core)
|
||||
ADD_COMPONENT KINSOL "include" kinsol/kinsol.h "lib" sundials_kinsol)
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,22 +0,0 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
# This file is part of the MFEM library. For more information and source code
|
||||
# availability visit https://mfem.org.
|
||||
#
|
||||
# MFEM is free software; you can redistribute it and/or modify it under the
|
||||
# terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
# CONTRIBUTING.md for details.
|
||||
|
||||
# Defines the following variables:
|
||||
# - TRIBOL_FOUND
|
||||
# - TRIBOL_LIBRARIES
|
||||
# - TRIBOL_INCLUDE_DIRS
|
||||
|
||||
include(MfemCmakeUtilities)
|
||||
# Note: components are enabled based on the find_package() parameters.
|
||||
mfem_find_package(Tribol TRIBOL TRIBOL_DIR "include" tribol/config.hpp "lib" tribol
|
||||
"Paths to headers required by Tribol." "Libraries required by Tribol."
|
||||
ADD_COMPONENT redecomp
|
||||
"include" redecomp/redecomp.hpp "lib" redecomp)
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -123,16 +123,21 @@ macro(add_mfem_miniapp MFEM_EXE_NAME)
|
||||
|
||||
# If CUDA is enabled, tag source files to be compiled with nvcc.
|
||||
if (MFEM_USE_CUDA)
|
||||
set_source_files_properties(${MAIN_LIST} ${EXTRA_SOURCES_LIST}
|
||||
PROPERTIES LANGUAGE CUDA)
|
||||
list(TRANSFORM EXTRA_OPTIONS_LIST PREPEND "-Xcompiler=")
|
||||
set_source_files_properties(${MAIN_LIST} ${EXTRA_SOURCES_LIST} PROPERTIES LANGUAGE CUDA)
|
||||
if (CMAKE_VERSION VERSION_GREATER_EQUAL 3.12.0)
|
||||
list(TRANSFORM EXTRA_OPTIONS_LIST PREPEND "-Xcompiler=")
|
||||
else()
|
||||
set(LIST_)
|
||||
foreach(item IN LISTS EXTRA_OPTIONS_LIST)
|
||||
list(APPEND LIST_ "-Xcompiler=${item}")
|
||||
endforeach()
|
||||
set(EXTRA_OPTIONS_LIST ${LIST_})
|
||||
endif()
|
||||
endif()
|
||||
|
||||
# Actually add the executable
|
||||
mfem_add_executable(${MFEM_EXE_NAME} ${MAIN_LIST}
|
||||
${EXTRA_SOURCES_LIST} ${EXTRA_HEADERS_LIST})
|
||||
install(TARGETS ${MFEM_EXE_NAME}
|
||||
RUNTIME DESTINATION miniapps)
|
||||
add_dependencies(${MFEM_ALL_MINIAPPS_TARGET_NAME} ${MFEM_EXE_NAME})
|
||||
add_dependencies(${MFEM_EXE_NAME} ${MFEM_EXEC_PREREQUISITES_TARGET_NAME})
|
||||
|
||||
@@ -150,21 +155,6 @@ macro(add_mfem_miniapp MFEM_EXE_NAME)
|
||||
endif()
|
||||
endmacro()
|
||||
|
||||
# Macro for setting variables like '<culib>_LIBRARIES' where <culib> is a CUDA
|
||||
# library like cublas. This macro assumes that the CUDAToolkit module was loaded
|
||||
# successfully. Example usage:
|
||||
# mfem_culib_set_libraries(CUBLAS cublas)
|
||||
macro(mfem_culib_set_libraries _CULIB _culib)
|
||||
# The following command does not work with older CMake versions, e.g. 3.20:
|
||||
# get_target_property(${_CULIB}_LIBRARIES CUDA::${_culib} LOCATION)
|
||||
# Therefore, we use the respective internal variable:
|
||||
set(${_CULIB}_LIBRARIES ${CUDA_${_culib}_LIBRARY})
|
||||
if (NOT ${_CULIB}_LIBRARIES)
|
||||
message(FATAL_ERROR
|
||||
"Error setting ${_CULIB}_LIBRARIES: ${${_CULIB}_LIBRARIES}")
|
||||
endif()
|
||||
endmacro()
|
||||
|
||||
|
||||
# Auxiliary function, used in mfem_find_package().
|
||||
function(mfem_find_component Prefix DirVar IncSuffixes Header LibSuffixes Lib
|
||||
@@ -835,20 +825,6 @@ function(mfem_get_target_options Target CompileOptsVar LinkOptsVar)
|
||||
endfunction(mfem_get_target_options)
|
||||
|
||||
|
||||
#
|
||||
# If ${Path} is not an absolute path, assign ${Prefix}/${Path} to the variable
|
||||
# ${OutVar}. If ${Path} is an absolute path, assign ${Path} to the variable
|
||||
# ${OutVar}.
|
||||
#
|
||||
function(mfem_path_to_fullpath Path Prefix OutVar)
|
||||
if(IS_ABSOLUTE "${Path}")
|
||||
set(${OutVar} "${Path}" PARENT_SCOPE)
|
||||
else()
|
||||
set(${OutVar} "${Prefix}/${Path}" PARENT_SCOPE)
|
||||
endif()
|
||||
endfunction()
|
||||
|
||||
|
||||
#
|
||||
# Function that creates 'config.mk' from 'config.mk.in' for the both the
|
||||
# build- and the install-locations and define install rules for 'config.mk'
|
||||
@@ -866,18 +842,17 @@ function(mfem_export_mk_files)
|
||||
|
||||
# Convert Boolean vars to YES/NO without writing the values to cache
|
||||
set(CONFIG_MK_BOOL_VARS MFEM_USE_MPI MFEM_USE_METIS MFEM_USE_METIS_5
|
||||
MFEM_USE_SINGLE MFEM_USE_DOUBLE MFEM_DEBUG MFEM_USE_EXCEPTIONS
|
||||
MFEM_USE_ZLIB MFEM_USE_LIBUNWIND MFEM_USE_LAPACK MFEM_THREAD_SAFE
|
||||
MFEM_USE_LEGACY_OPENMP MFEM_USE_OPENMP MFEM_USE_MEMALLOC MFEM_USE_SUNDIALS
|
||||
MFEM_USE_SUITESPARSE MFEM_USE_SUPERLU MFEM_USE_SUPERLU5 MFEM_USE_MUMPS
|
||||
MFEM_USE_STRUMPACK MFEM_USE_GINKGO MFEM_USE_AMGX MFEM_USE_MAGMA
|
||||
MFEM_USE_GNUTLS MFEM_USE_NETCDF MFEM_USE_PETSC MFEM_USE_SLEPC
|
||||
MFEM_USE_MPFR MFEM_USE_SIDRE MFEM_USE_FMS MFEM_USE_CONDUIT MFEM_USE_PUMI
|
||||
MFEM_USE_HIOP MFEM_USE_GSLIB MFEM_USE_CUDA MFEM_USE_HIP MFEM_USE_RAJA
|
||||
MFEM_USE_OCCA MFEM_USE_CEED MFEM_USE_CALIPER MFEM_USE_UMPIRE MFEM_USE_SIMD
|
||||
MFEM_USE_ADIOS2 MFEM_USE_MKL_CPARDISO MFEM_USE_MKL_PARDISO
|
||||
MFEM_DEBUG MFEM_USE_EXCEPTIONS MFEM_USE_ZLIB MFEM_USE_LIBUNWIND
|
||||
MFEM_USE_LAPACK MFEM_THREAD_SAFE MFEM_USE_LEGACY_OPENMP MFEM_USE_OPENMP
|
||||
MFEM_USE_MEMALLOC MFEM_USE_SUNDIALS MFEM_USE_SUITESPARSE
|
||||
MFEM_USE_SUPERLU MFEM_USE_SUPERLU5 MFEM_USE_MUMPS MFEM_USE_STRUMPACK
|
||||
MFEM_USE_GINKGO MFEM_USE_AMGX MFEM_USE_GNUTLS MFEM_USE_NETCDF
|
||||
MFEM_USE_PETSC MFEM_USE_SLEPC MFEM_USE_MPFR MFEM_USE_SIDRE MFEM_USE_FMS
|
||||
MFEM_USE_CONDUIT MFEM_USE_PUMI MFEM_USE_HIOP MFEM_USE_GSLIB MFEM_USE_CUDA
|
||||
MFEM_USE_HIP MFEM_USE_RAJA MFEM_USE_OCCA MFEM_USE_CEED MFEM_USE_CALIPER
|
||||
MFEM_USE_UMPIRE MFEM_USE_SIMD MFEM_USE_ADIOS2 MFEM_USE_MKL_CPARDISO
|
||||
MFEM_USE_ADFORWARD MFEM_USE_CODIPACK MFEM_USE_BENCHMARK MFEM_USE_PARELAG
|
||||
MFEM_USE_TRIBOL MFEM_USE_MOONOLITH MFEM_USE_ALGOIM MFEM_USE_ENZYME)
|
||||
MFEM_USE_MOONOLITH MFEM_USE_ALGOIM MFEM_USE_ENZYME)
|
||||
foreach(var ${CONFIG_MK_BOOL_VARS})
|
||||
if (${var})
|
||||
set(${var} YES)
|
||||
@@ -1015,12 +990,9 @@ function(mfem_export_mk_files)
|
||||
"${PROJECT_BINARY_DIR}/config/test.mk" COPYONLY)
|
||||
|
||||
# Update variables for the install-tree version of 'config.mk'
|
||||
mfem_path_to_fullpath(
|
||||
"${INSTALL_INCLUDE_DIR}" "${CMAKE_INSTALL_PREFIX}" MFEM_INC_DIR)
|
||||
mfem_path_to_fullpath(
|
||||
"${INSTALL_LIB_DIR}" "${CMAKE_INSTALL_PREFIX}" MFEM_LIB_DIR)
|
||||
mfem_path_to_fullpath(
|
||||
"${INSTALL_SHARE_DIR}/mfem/test.mk" "${CMAKE_INSTALL_PREFIX}" MFEM_TEST_MK)
|
||||
set(MFEM_INC_DIR "${CMAKE_INSTALL_PREFIX}/include")
|
||||
set(MFEM_LIB_DIR "${CMAKE_INSTALL_PREFIX}/lib")
|
||||
set(MFEM_TEST_MK "${CMAKE_INSTALL_PREFIX}/share/mfem/test.mk")
|
||||
set(MFEM_CONFIG_EXTRA "")
|
||||
|
||||
# Create the install-tree version of 'config.mk'
|
||||
@@ -1030,30 +1002,8 @@ function(mfem_export_mk_files)
|
||||
|
||||
# Install rules for 'config.mk' and 'test.mk'
|
||||
install(FILES ${PROJECT_SOURCE_DIR}/config/test.mk
|
||||
DESTINATION ${INSTALL_SHARE_DIR}/mfem/)
|
||||
DESTINATION ${CMAKE_INSTALL_PREFIX}/share/mfem/)
|
||||
install(FILES ${PROJECT_BINARY_DIR}/config/config-install.mk
|
||||
DESTINATION ${INSTALL_SHARE_DIR}/mfem/
|
||||
RENAME config.mk)
|
||||
DESTINATION ${CMAKE_INSTALL_PREFIX}/share/mfem/ RENAME config.mk)
|
||||
|
||||
endfunction()
|
||||
|
||||
|
||||
#
|
||||
# Function similar to the macro _GNUInstallDirs_cache_path from the module
|
||||
# GNUInstallDirs. Used to process variables like INSTALL_LIB_DIR if they are
|
||||
# set on the cmake command line without specifying type: -DINSTALL_LIB_DIR=lib.
|
||||
# Without this special treatment, relative paths are expanded to full paths
|
||||
# and we want to avoid that.
|
||||
#
|
||||
function(mfem_cache_path PathVar DefaultPath HelpStr)
|
||||
if(NOT DEFINED ${PathVar})
|
||||
set(${PathVar} "${DefaultPath}" CACHE PATH "${HelpStr}")
|
||||
endif()
|
||||
get_property(cache_type CACHE ${PathVar} PROPERTY TYPE)
|
||||
if(cache_type STREQUAL "UNINITIALIZED")
|
||||
file(TO_CMAKE_PATH "${${PathVar}}" cmakepath)
|
||||
set_property(CACHE ${PathVar} PROPERTY TYPE PATH)
|
||||
set_property(CACHE ${PathVar} PROPERTY VALUE "${cmakepath}")
|
||||
set_property(CACHE ${PathVar} PROPERTY HELPSTRING "${HelpStr}")
|
||||
endif()
|
||||
endfunction()
|
||||
|
||||
+1
-66
@@ -1,4 +1,4 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
@@ -23,62 +23,6 @@
|
||||
#include "_config.hpp"
|
||||
#endif
|
||||
|
||||
namespace mfem
|
||||
{
|
||||
|
||||
#if (defined(MFEM_USE_CUDA) && defined(__CUDACC__)) || \
|
||||
(defined(MFEM_USE_HIP) && defined(__HIPCC__))
|
||||
#define MFEM_HOST_DEVICE __host__ __device__
|
||||
#else
|
||||
#define MFEM_HOST_DEVICE
|
||||
#endif
|
||||
|
||||
// MFEM precision configuration
|
||||
|
||||
#if defined MFEM_USE_SINGLE && defined MFEM_USE_DOUBLE
|
||||
#error "DOUBLE and SINGLE precision cannot both be specified"
|
||||
#endif
|
||||
|
||||
#ifdef MFEM_USE_SINGLE
|
||||
typedef float real_t;
|
||||
#elif defined MFEM_USE_DOUBLE
|
||||
typedef double real_t;
|
||||
#else
|
||||
#error "Either DOUBLE or SINGLE precision must be specified"
|
||||
#endif
|
||||
|
||||
MFEM_HOST_DEVICE
|
||||
constexpr real_t operator""_r(long double v)
|
||||
{
|
||||
return static_cast<real_t>(v);
|
||||
}
|
||||
|
||||
MFEM_HOST_DEVICE
|
||||
constexpr real_t operator""_r(unsigned long long v)
|
||||
{
|
||||
return static_cast<real_t>(v);
|
||||
}
|
||||
|
||||
} // namespace mfem
|
||||
|
||||
// Return value for main function in examples that should be skipped by testing
|
||||
// in some case. This return value prevents failures in testing.
|
||||
#define MFEM_SKIP_RETURN_VALUE 242
|
||||
|
||||
// Request a global object to be instantiated for each thread in its TLS.
|
||||
#define MFEM_THREAD_LOCAL thread_local
|
||||
|
||||
// MFEM_DEPRECATED macro to mark obsolete functions and methods
|
||||
// see https://stackoverflow.com/questions/295120/c-mark-as-deprecated
|
||||
#if defined(__GNUC__) || defined(__clang__)
|
||||
#define MFEM_DEPRECATED __attribute__((deprecated))
|
||||
#elif defined(_MSC_VER)
|
||||
#define MFEM_DEPRECATED __declspec(deprecated)
|
||||
#else
|
||||
#pragma message("WARNING: You need to implement MFEM_DEPRECATED for this compiler")
|
||||
#define MFEM_DEPRECATED
|
||||
#endif
|
||||
|
||||
// Common configuration macros
|
||||
|
||||
#if (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 7)) || defined(__clang__)
|
||||
@@ -120,15 +64,6 @@ constexpr real_t operator""_r(unsigned long long v)
|
||||
|
||||
// Check dependencies:
|
||||
|
||||
// Define MFEM_MPI_REAL_T to be the appropriate MPI real type
|
||||
#ifdef MFEM_USE_MPI
|
||||
#ifdef MFEM_USE_SINGLE
|
||||
#define MFEM_MPI_REAL_T MPI_FLOAT
|
||||
#elif defined MFEM_USE_DOUBLE
|
||||
#define MFEM_MPI_REAL_T MPI_DOUBLE
|
||||
#endif
|
||||
#endif
|
||||
|
||||
// Options that require MPI
|
||||
#ifndef MFEM_USE_MPI
|
||||
#ifdef MFEM_USE_SUPERLU
|
||||
|
||||
+1
-10
@@ -1,4 +1,4 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
@@ -46,12 +46,6 @@
|
||||
// Requires an MPI compiler, and the libraries HYPRE and METIS.
|
||||
// #define MFEM_USE_MPI
|
||||
|
||||
// Use double-precision floating point type
|
||||
// #define MFEM_USE_DOUBLE
|
||||
|
||||
// Use single-precision floating point type
|
||||
// #define MFEM_USE_SINGLE
|
||||
|
||||
// Enable debug checks in MFEM.
|
||||
// #define MFEM_DEBUG
|
||||
|
||||
@@ -114,9 +108,6 @@
|
||||
// Enable MFEM functionality based on the AmgX library.
|
||||
// #define MFEM_USE_AMGX
|
||||
|
||||
// Enable MFEM functionality based on the MAGMA library.
|
||||
// #define MFEM_USE_MAGMA
|
||||
|
||||
// Enable secure socket streams based on the GNUTLS library.
|
||||
// #define MFEM_USE_GNUTLS
|
||||
|
||||
|
||||
+1
-5
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -18,8 +18,6 @@ MFEM_GIT_STRING = @MFEM_GIT_STRING@
|
||||
MFEM_USE_MPI = @MFEM_USE_MPI@
|
||||
MFEM_USE_METIS = @MFEM_USE_METIS@
|
||||
MFEM_USE_METIS_5 = @MFEM_USE_METIS_5@
|
||||
MFEM_USE_DOUBLE = @MFEM_USE_DOUBLE@
|
||||
MFEM_USE_SINGLE = @MFEM_USE_SINGLE@
|
||||
MFEM_DEBUG = @MFEM_DEBUG@
|
||||
MFEM_USE_EXCEPTIONS = @MFEM_USE_EXCEPTIONS@
|
||||
MFEM_USE_ZLIB = @MFEM_USE_ZLIB@
|
||||
@@ -38,7 +36,6 @@ MFEM_USE_MUMPS = @MFEM_USE_MUMPS@
|
||||
MFEM_USE_STRUMPACK = @MFEM_USE_STRUMPACK@
|
||||
MFEM_USE_GINKGO = @MFEM_USE_GINKGO@
|
||||
MFEM_USE_AMGX = @MFEM_USE_AMGX@
|
||||
MFEM_USE_MAGMA = @MFEM_USE_MAGMA@
|
||||
MFEM_USE_GNUTLS = @MFEM_USE_GNUTLS@
|
||||
MFEM_USE_NETCDF = @MFEM_USE_NETCDF@
|
||||
MFEM_USE_PETSC = @MFEM_USE_PETSC@
|
||||
@@ -66,7 +63,6 @@ MFEM_USE_ADFORWARD = @MFEM_USE_ADFORWARD@
|
||||
MFEM_USE_CODIPACK = @MFEM_USE_CODIPACK@
|
||||
MFEM_USE_BENCHMARK = @MFEM_USE_BENCHMARK@
|
||||
MFEM_USE_PARELAG = @MFEM_USE_PARELAG@
|
||||
MFEM_USE_TRIBOL = @MFEM_USE_TRIBOL@
|
||||
MFEM_USE_ENZYME = @MFEM_USE_ENZYME@
|
||||
|
||||
# Compiler, compile options, and link options
|
||||
|
||||
+11
-26
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -22,8 +22,6 @@ endif()
|
||||
option(BUILD_SHARED_LIBS "Enable shared library build of MFEM" OFF)
|
||||
option(MFEM_USE_MPI "Enable MPI parallel build" OFF)
|
||||
option(MFEM_USE_METIS "Enable METIS usage" ${MFEM_USE_MPI})
|
||||
set(MFEM_PRECISION "double" CACHE STRING
|
||||
"Floating-point precision to use: single, or double")
|
||||
option(MFEM_USE_EXCEPTIONS "Enable the use of exceptions" OFF)
|
||||
option(MFEM_USE_ZLIB "Enable zlib for compressed data streams." OFF)
|
||||
option(MFEM_USE_LIBUNWIND "Enable backtrace for errors." OFF)
|
||||
@@ -40,7 +38,6 @@ option(MFEM_USE_MUMPS "Enable MUMPS usage" OFF)
|
||||
option(MFEM_USE_STRUMPACK "Enable STRUMPACK usage" OFF)
|
||||
option(MFEM_USE_GINKGO "Enable Ginkgo usage" OFF)
|
||||
option(MFEM_USE_AMGX "Enable AmgX usage" OFF)
|
||||
option(MFEM_USE_MAGMA "Enable MAGMA usage" OFF)
|
||||
option(MFEM_USE_GNUTLS "Enable GNUTLS usage" OFF)
|
||||
option(MFEM_USE_GSLIB "Enable GSLIB usage" OFF)
|
||||
option(MFEM_USE_NETCDF "Enable NETCDF usage" OFF)
|
||||
@@ -68,7 +65,6 @@ option(MFEM_USE_ADFORWARD "Enable forward mode for AD" OFF)
|
||||
option(MFEM_USE_CODIPACK "Enable automatic differentiation (AD) using CoDiPack" OFF)
|
||||
option(MFEM_USE_BENCHMARK "Enable Google Benchmark" OFF)
|
||||
option(MFEM_USE_PARELAG "Enable ParELAG" OFF)
|
||||
option(MFEM_USE_TRIBOL "Enable Tribol" OFF)
|
||||
option(MFEM_USE_ENZYME "Enable Enzyme" OFF)
|
||||
|
||||
# Optional overrides for autodetected MPIEXEC and MPIEXEC_NUMPROC_FLAG
|
||||
@@ -86,7 +82,7 @@ set(MFEM_MPI_NP 4 CACHE STRING "Number of processes used for MPI tests")
|
||||
option(MFEM_ENABLE_TESTING "Enable the ctest framework for testing" ON)
|
||||
option(MFEM_ENABLE_EXAMPLES "Build all of the examples" OFF)
|
||||
option(MFEM_ENABLE_MINIAPPS "Build all of the miniapps" OFF)
|
||||
option(MFEM_ENABLE_BENCHMARKS "Build all of the benchmarks" OFF)
|
||||
option(MFEM_ENABLE_GOOGLE_BENCHMARKS "Build all of the Google benchmarks" OFF)
|
||||
|
||||
# Setting CXX/MPICXX on the command line or in user.cmake will overwrite the
|
||||
# autodetected C++ compiler.
|
||||
@@ -110,7 +106,12 @@ set(HYPRE_DIR "${MFEM_DIR}/../hypre/src/hypre" CACHE PATH
|
||||
# If hypre was compiled to depend on BLAS and LAPACK:
|
||||
# set(HYPRE_REQUIRED_PACKAGES "BLAS" "LAPACK" CACHE STRING
|
||||
# "Packages that HYPRE depends on.")
|
||||
# CUDA and HIP dependencies for HYPRE are handled in FindHYPRE.cmake.
|
||||
if (MFEM_USE_CUDA)
|
||||
# This is only necessary when hypre is built with cuda:
|
||||
set(HYPRE_REQUIRED_LIBRARIES "-lcusparse" "-lcurand" CACHE STRING
|
||||
"Libraries that HYPRE depends on.")
|
||||
endif()
|
||||
# HIP dependency for HYPRE is handled in FindHYPRE.cmake.
|
||||
|
||||
set(METIS_DIR "${MFEM_DIR}/../metis-4.0" CACHE PATH "Path to the METIS library.")
|
||||
|
||||
@@ -156,8 +157,7 @@ set(STRUMPACK_DIR "${MFEM_DIR}/../STRUMPACK-build" CACHE PATH
|
||||
# STRUMPACK may also depend on "OpenMP", depending on how it was compiled.
|
||||
# Starting with v2.2.0 of STRUMPACK, ParMETIS and Scotch are optional.
|
||||
set(STRUMPACK_REQUIRED_PACKAGES "MPI" "MPI_Fortran" "ParMETIS" "METIS"
|
||||
"Scotch/ptscotch/ptscotcherr/scotch/scotcherr"
|
||||
"ScaLAPACK" "LAPACK" "BLAS" CACHE STRING
|
||||
"ScaLAPACK" "Scotch/ptscotch/ptscotcherr/scotch/scotcherr" CACHE STRING
|
||||
"Additional packages required by STRUMPACK.")
|
||||
# If the MPI package does not find all required Fortran libraries:
|
||||
# set(STRUMPACK_REQUIRED_LIBRARIES "gfortran" "mpi_mpifh" CACHE STRING
|
||||
@@ -184,10 +184,6 @@ set(Ginkgo_DIR "${MFEM_DIR}/../ginkgo" CACHE PATH "Path to the Ginkgo library.")
|
||||
|
||||
set(AMGX_DIR "${MFEM_DIR}/../amgx" CACHE PATH "Path to AmgX")
|
||||
|
||||
set(MAGMA_DIR "${MFEM_DIR}/../magma" CACHE PATH "Path to MAGMA")
|
||||
set(MAGMA_REQUIRED_PACKAGES "BLAS" "LAPACK" CACHE STRING
|
||||
"Additional packages required by MAGMA.")
|
||||
|
||||
set(GNUTLS_DIR "" CACHE PATH "Path to the GnuTLS library.")
|
||||
|
||||
set(GSLIB_DIR "" CACHE PATH "Path to the GSLIB library.")
|
||||
@@ -218,15 +214,8 @@ set(CONDUIT_DIR "${MFEM_DIR}/../conduit" CACHE PATH
|
||||
|
||||
set(AXOM_DIR "${MFEM_DIR}/../axom" CACHE PATH "Path to the Axom library.")
|
||||
# May need to add "Boost" as requirement.
|
||||
if (MFEM_USE_SIDRE)
|
||||
if (MFEM_USE_MPI)
|
||||
set(Axom_REQUIRED_PACKAGES "Conduit/blueprint/blueprint_mpi/relay/relay_mpi" CACHE STRING
|
||||
"Additional packages required by Axom.")
|
||||
elseif()
|
||||
set(Axom_REQUIRED_PACKAGES "Conduit/blueprint/relay" CACHE STRING
|
||||
"Additional packages required by Axom.")
|
||||
endif()
|
||||
endif()
|
||||
set(Axom_REQUIRED_PACKAGES "Conduit/relay/blueprint" CACHE STRING
|
||||
"Additional packages required by Axom.")
|
||||
|
||||
set(PUMI_DIR "${MFEM_DIR}/../pumi-2.1.0" CACHE STRING
|
||||
"Directory where PUMI is installed")
|
||||
@@ -263,10 +252,6 @@ set(PARELAG_INCLUDE_DIRS "${PARELAG_DIR}/src;${PARELAG_DIR}/build/src" CACHE
|
||||
set(PARELAG_LIBRARIES "${PARELAG_DIR}/build/src/libParELAG.a" CACHE STRING
|
||||
"The ParELAG library.")
|
||||
|
||||
set(TRIBOL_DIR "${MFEM_DIR}/../tribol" CACHE PATH "Path to Tribol")
|
||||
set(Tribol_REQUIRED_PACKAGES "Axom/core/mint/slam/slic" CACHE STRING
|
||||
"Additional packages required by Tribol")
|
||||
|
||||
set(BLAS_INCLUDE_DIRS "" CACHE STRING "Path to BLAS headers.")
|
||||
set(BLAS_LIBRARIES "" CACHE STRING "The BLAS library.")
|
||||
set(LAPACK_INCLUDE_DIRS "" CACHE STRING "Path to LAPACK headers.")
|
||||
|
||||
+26
-68
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -95,10 +95,6 @@ else
|
||||
# Silence unused command line argument warnings when generating dependencies
|
||||
# with mpicxx and clang
|
||||
DEP_FLAGS := -Wno-unused-command-line-argument $(DEP_FLAGS)
|
||||
# Silence "ignoring duplicate libraries" warnings on new (Xcode 15) linker
|
||||
ifneq (,$(findstring PROJECT:dyld,$(shell ld -v 2>&1)))
|
||||
LDFLAGS_INTERNAL = -Xlinker -no_warn_duplicate_libraries
|
||||
endif
|
||||
endif
|
||||
|
||||
# Set CXXFLAGS to overwrite the default selection of DEBUG_FLAGS/OPTIM_FLAGS
|
||||
@@ -124,7 +120,6 @@ MFEM_MPI_NP = 4
|
||||
MFEM_USE_MPI = NO
|
||||
MFEM_USE_METIS = $(MFEM_USE_MPI)
|
||||
MFEM_USE_METIS_5 = NO
|
||||
MFEM_PRECISION = double
|
||||
MFEM_DEBUG = NO
|
||||
MFEM_USE_EXCEPTIONS = NO
|
||||
MFEM_USE_ZLIB = NO
|
||||
@@ -143,7 +138,6 @@ MFEM_USE_MUMPS = NO
|
||||
MFEM_USE_STRUMPACK = NO
|
||||
MFEM_USE_GINKGO = NO
|
||||
MFEM_USE_AMGX = NO
|
||||
MFEM_USE_MAGMA = NO
|
||||
MFEM_USE_GNUTLS = NO
|
||||
MFEM_USE_NETCDF = NO
|
||||
MFEM_USE_PETSC = NO
|
||||
@@ -172,21 +166,8 @@ MFEM_USE_ADFORWARD = NO
|
||||
MFEM_USE_CODIPACK = NO
|
||||
MFEM_USE_BENCHMARK = NO
|
||||
MFEM_USE_PARELAG = NO
|
||||
MFEM_USE_TRIBOL = NO
|
||||
MFEM_USE_ENZYME = NO
|
||||
|
||||
# Process MFEM_PRECISION -> MFEM_USE_SINGLE, MFEM_USE_DOUBLE
|
||||
ifneq ($(filter double Double DOUBLE,$(MFEM_PRECISION)),)
|
||||
MFEM_USE_DOUBLE = YES
|
||||
MFEM_USE_SINGLE = NO
|
||||
else ifneq ($(filter single Single SINGLE,$(MFEM_PRECISION)),)
|
||||
MFEM_USE_DOUBLE = NO
|
||||
MFEM_USE_SINGLE = YES
|
||||
else ifeq ($(MAKECMDGOALS),config)
|
||||
$(error Invalid floating-point precision: \
|
||||
MFEM_PRECISION = $(MFEM_PRECISION))
|
||||
endif
|
||||
|
||||
# MPI library compile and link flags
|
||||
# These settings are used only when building MFEM with MPI + HIP
|
||||
ifeq ($(MFEM_USE_MPI)$(MFEM_USE_HIP),YESYES)
|
||||
@@ -271,6 +252,10 @@ POSIX_CLOCKS_LIB = -lrt
|
||||
# For sundials_nvecmpiplusx and nvecparallel remember to build with MPI_ENABLE=ON
|
||||
# and modify cmake variables for hypre for sundials
|
||||
SUNDIALS_DIR = @MFEM_DIR@/../sundials-5.0.0/instdir
|
||||
# SUNDIALS >= 6.4.0 requires C++14:
|
||||
ifeq ($(MFEM_USE_SUNDIALS),YES)
|
||||
BASE_FLAGS = -std=c++14
|
||||
endif
|
||||
SUNDIALS_OPT = -I$(SUNDIALS_DIR)/include
|
||||
SUNDIALS_LIB = $(XLINKER)-rpath,$(SUNDIALS_DIR)/lib64\
|
||||
$(XLINKER)-rpath,$(SUNDIALS_DIR)/lib\
|
||||
@@ -285,13 +270,6 @@ endif
|
||||
ifeq ($(MFEM_USE_HIP),YES)
|
||||
SUNDIALS_LIB += -lsundials_nvechip
|
||||
endif
|
||||
SUNDIALS_CORE_PAT = $(subst\
|
||||
@MFEM_DIR@,$(MFEM_DIR),$(SUNDIALS_DIR))/lib*/libsundials_core.*
|
||||
ifeq ($(MFEM_USE_SUNDIALS),YES)
|
||||
ifneq ($(wildcard $(SUNDIALS_CORE_PAT)),)
|
||||
SUNDIALS_LIB += -lsundials_core
|
||||
endif
|
||||
endif
|
||||
# If SUNDIALS was built with KLU:
|
||||
# MFEM_USE_SUITESPARSE = YES
|
||||
|
||||
@@ -339,16 +317,14 @@ MPI_FORTRAN_LIB = -lmpifort
|
||||
# MUMPS library configuration
|
||||
MUMPS_DIR = @MFEM_DIR@/../MUMPS_5.5.0
|
||||
MUMPS_OPT = -I$(MUMPS_DIR)/include
|
||||
MUMPS_LIB = $(XLINKER)-rpath,$(MUMPS_DIR)/lib -L$(MUMPS_DIR)/lib
|
||||
ifeq ($(MFEM_USE_SINGLE),YES)
|
||||
MUMPS_LIB += -lsmumps
|
||||
else
|
||||
MUMPS_LIB += -ldmumps
|
||||
endif
|
||||
MUMPS_LIB += -lmumps_common -lpord $(SCALAPACK_LIB) $(LAPACK_LIB) $(MPI_FORTRAN_LIB)
|
||||
MUMPS_LIB = $(XLINKER)-rpath,$(MUMPS_DIR)/lib -L$(MUMPS_DIR)/lib -ldmumps\
|
||||
-lmumps_common -lpord $(SCALAPACK_LIB) $(LAPACK_LIB) $(MPI_FORTRAN_LIB)
|
||||
|
||||
# STRUMPACK library configuration
|
||||
STRUMPACK_DIR = @MFEM_DIR@/../STRUMPACK-build
|
||||
ifeq ($(MFEM_USE_STRUMPACK),YES)
|
||||
BASE_FLAGS = -std=c++14
|
||||
endif
|
||||
STRUMPACK_OPT = -I$(STRUMPACK_DIR)/include $(SCOTCH_OPT)
|
||||
# If STRUMPACK was build with OpenMP support, the following may be need:
|
||||
# STRUMPACK_OPT += $(OPENMP_OPT)
|
||||
@@ -359,6 +335,9 @@ STRUMPACK_LIB = -L$(STRUMPACK_DIR)/lib -lstrumpack $(MPI_FORTRAN_LIB)\
|
||||
GINKGO_DIR = @MFEM_DIR@/../ginkgo/install
|
||||
GINKGO_SEARCH_DIR = $(subst @MFEM_DIR@,$(MFEM_DIR),$(GINKGO_DIR))
|
||||
GINKGO_BUILD_TYPE=Release
|
||||
ifeq ($(MFEM_USE_GINKGO),YES)
|
||||
BASE_FLAGS = -std=c++14
|
||||
endif
|
||||
GINKGO_OPT = -isystem $(GINKGO_DIR)/include
|
||||
GINKGO_LIB_DIR = $(sort $(dir $(wildcard\
|
||||
$(GINKGO_SEARCH_DIR)/lib*/libginkgo*.a\
|
||||
@@ -390,12 +369,7 @@ GINKGO_LIB = $(XLINKER)-rpath,$(GINKGO_LINK_LIB_DIR) -L$(GINKGO_LINK_LIB_DIR)\
|
||||
# AmgX library configuration
|
||||
AMGX_DIR = @MFEM_DIR@/../amgx
|
||||
AMGX_OPT = -I$(AMGX_DIR)/include
|
||||
AMGX_LIB = -L$(AMGX_DIR)/lib -lamgx -lcusparse -lcusolver -lcublas -lnvToolsExt
|
||||
|
||||
# MAGMA library configuration
|
||||
MAGMA_DIR = @MFEM_DIR@/../magma
|
||||
MAGMA_OPT = -I$(MAGMA_DIR)/include
|
||||
MAGMA_LIB = -L$(MAGMA_DIR)/lib -l:libmagma.a -lcublas -lcusparse $(LAPACK_LIB)
|
||||
AMGX_LIB = -lcusparse -lcusolver -lcublas -lnvToolsExt -L$(AMGX_DIR)/lib -lamgx
|
||||
|
||||
# GnuTLS library configuration
|
||||
GNUTLS_OPT =
|
||||
@@ -484,8 +458,8 @@ SIDRE_LIB = \
|
||||
# Note that PUMI_DIR is needed -- it is used to check for gmi_sim.h
|
||||
PUMI_DIR = @MFEM_DIR@/../pumi-2.1.0
|
||||
PUMI_OPT = -I$(PUMI_DIR)/include
|
||||
PUMI_LIB = -L$(PUMI_DIR)/lib64 -L$(PUMI_DIR)/lib -lpumi -lcrv -lma -lmds -lapf\
|
||||
-lpcu -lgmi -lparma -llion -lmth -lapf_zoltan -lspr
|
||||
PUMI_LIB = -L$(PUMI_DIR)/lib -lpumi -lcrv -lma -lmds -lapf -lpcu -lgmi -lparma\
|
||||
-llion -lmth -lapf_zoltan -lspr
|
||||
|
||||
# HIOP
|
||||
HIOP_DIR = @MFEM_DIR@/../hiop/install
|
||||
@@ -504,11 +478,11 @@ GSLIB_LIB = -L$(GSLIB_DIR)/lib -lgs
|
||||
|
||||
# CUDA library configuration
|
||||
CUDA_OPT =
|
||||
CUDA_LIB = -lcusparse -lcublas
|
||||
CUDA_LIB = -lcusparse
|
||||
|
||||
# HIP library configuration
|
||||
HIP_OPT =
|
||||
HIP_LIB = -L$(HIP_DIR)/lib $(XLINKER)-rpath,$(HIP_DIR)/lib -lhipsparse -lhipblas
|
||||
HIP_LIB = -L$(HIP_DIR)/lib $(XLINKER)-rpath,$(HIP_DIR)/lib -lhipsparse
|
||||
|
||||
# OCCA library configuration
|
||||
OCCA_DIR = @MFEM_DIR@/../occa
|
||||
@@ -530,10 +504,8 @@ ifdef GOTCHA_DIR
|
||||
endif
|
||||
|
||||
# BLITZ library configuration
|
||||
# BLITZ_DIR must be the custom installation folder (-DCMAKE_INSTALL_PREFIX).
|
||||
BLITZ_DIR = @MFEM_DIR@/../blitz/install
|
||||
BLITZ_DIR = @MFEM_DIR@/../blitz
|
||||
BLITZ_OPT = -I$(BLITZ_DIR)/include
|
||||
# On intel machines, use /lib64 instead of /lib.
|
||||
BLITZ_LIB = $(XLINKER)-rpath,$(BLITZ_DIR)/lib -L$(BLITZ_DIR)/lib -lblitz
|
||||
|
||||
# ALGOIM library configuration
|
||||
@@ -552,6 +524,9 @@ CEED_OPT = -I$(CEED_DIR)/include
|
||||
CEED_LIB = $(XLINKER)-rpath,$(CEED_DIR)/lib -L$(CEED_DIR)/lib -lceed
|
||||
|
||||
# RAJA library configuration
|
||||
ifeq ($(MFEM_USE_RAJA),YES)
|
||||
BASE_FLAGS = -std=c++14
|
||||
endif
|
||||
RAJA_DIR = @MFEM_DIR@/../raja
|
||||
RAJA_OPT = -I$(RAJA_DIR)/include
|
||||
ifdef CUB_DIR
|
||||
@@ -566,13 +541,12 @@ endif
|
||||
RAJA_LIB = $(XLINKER)-rpath,$(RAJA_DIR)/lib -L$(RAJA_DIR)/lib -lRAJA $(CAMP_LIB)
|
||||
|
||||
# UMPIRE library configuration
|
||||
ifeq ($(MFEM_USE_UMPIRE),YES)
|
||||
BASE_FLAGS = -std=c++14
|
||||
endif
|
||||
UMPIRE_DIR = @MFEM_DIR@/../umpire
|
||||
UMPIRE_OPT = -I$(UMPIRE_DIR)/include $(if $(CAMP_DIR), -I$(CAMP_DIR)/include)
|
||||
UMPIRE_LIB = -L$(UMPIRE_DIR)/lib -L$(UMPIRE_DIR)/lib64 -lumpire $(CAMP_LIB)
|
||||
ifdef FMT_DIR
|
||||
UMPIRE_OPT += -I$(FMT_DIR)/include
|
||||
UMPIRE_LIB += -L$(FMT_DIR)/lib -L$(FMT_DIR)/lib64 -lfmt
|
||||
endif
|
||||
UMPIRE_LIB = -L$(UMPIRE_DIR)/lib -lumpire $(CAMP_LIB)
|
||||
|
||||
# MKL CPardiso library configuration
|
||||
MKL_CPARDISO_DIR ?=
|
||||
@@ -596,13 +570,6 @@ PARELAG_DIR = @MFEM_DIR@/../parelag
|
||||
PARELAG_OPT = -I$(PARELAG_DIR)/src -I$(PARELAG_DIR)/build/src
|
||||
PARELAG_LIB = -L$(PARELAG_DIR)/build/src -lParELAG
|
||||
|
||||
# Tribol library configuration
|
||||
AXOM_DIR = @MFEM_DIR@/../axom
|
||||
TRIBOL_DIR = @MFEM_DIR@/../tribol
|
||||
TRIBOL_OPT = -I$(TRIBOL_DIR)/include -I$(AXOM_DIR)/include
|
||||
TRIBOL_LIB = -L$(TRIBOL_DIR)/lib -ltribol -lredecomp -L$(AXOM_DIR)/lib -laxom_mint\
|
||||
-laxom_slam -laxom_slic -laxom_core
|
||||
|
||||
# Enzyme configuration
|
||||
|
||||
# If you want to enable automatic differentiation at compile time, use the
|
||||
@@ -619,15 +586,6 @@ ENZYME_VERSION ?= 14
|
||||
ENZYME_OPT = -fno-experimental-new-pass-manager -Xclang -load -Xclang $(ENZYME_DIR)/ClangEnzyme-$(ENZYME_VERSION).so
|
||||
ENZYME_LIB = ""
|
||||
|
||||
# Google Benchmark, SUNDIALS >= 6.4.0, STRUMPACK, RAJA, UMPIRE, and Tribol require C++14:
|
||||
ifneq ($(filter YES,$(MFEM_USE_BENCHMARK) $(MFEM_USE_SUNDIALS) $(MFEM_USE_STRUMPACK) $(MFEM_USE_RAJA) $(MFEM_USE_UMPIRE) $(MFEM_USE_TRIBOL)),)
|
||||
BASE_FLAGS = -std=c++14
|
||||
endif
|
||||
# Ginkgo requires C++17:
|
||||
ifeq ($(MFEM_USE_GINKGO),YES)
|
||||
BASE_FLAGS = -std=c++17
|
||||
endif
|
||||
|
||||
# If YES, enable some informational messages
|
||||
VERBOSE = NO
|
||||
|
||||
|
||||
@@ -17,7 +17,7 @@ We provide two containers, which you can either build or use directly from
|
||||
|
||||
In the above, "ghcr.io" means "GitHub Container Registry" and
|
||||
is the [GitHub packages](https://github.com/features/packages) registry that supports
|
||||
Docker images and other OCI artifacts.
|
||||
Docker images and other OCI artifacts.
|
||||
|
||||
### Ubuntu
|
||||
|
||||
@@ -132,7 +132,7 @@ examples.
|
||||
|
||||
> Use this build for a development environment with spack and mfem
|
||||
|
||||
This container is also [provided on GitHub packages](https://github.com/mfem/mfem/pkgs/container/mfem-ubuntu-base),
|
||||
This container is also [provided on GitHub packages](https://github.com/mfem/mfem/pkgs/container/mfem-ubuntu-base),
|
||||
however you can build it locally too:
|
||||
|
||||
```bash
|
||||
@@ -197,7 +197,7 @@ Average reduction factor = 0.140201
|
||||
|
||||
This container is likely ideal for someone that wants to develop mfem itself.
|
||||
For other use cases, we recommend using the slimmer image. As an example,
|
||||
if you want to develop with your own code base (and mfem as is in the container)
|
||||
if you want to develop with your own code base (and mfem as is in the container)
|
||||
you can bind to somewhere else in the container (e.g., src)
|
||||
|
||||
```bash
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
@@ -9,11 +9,7 @@
|
||||
// terms of the BSD-3 license. We welcome feedback and contributions, see file
|
||||
// CONTRIBUTING.md for details.
|
||||
|
||||
#ifdef MFEM_USE_SINGLE
|
||||
#include "smumps_c.h"
|
||||
#else
|
||||
#include "dmumps_c.h"
|
||||
#endif
|
||||
#include <string>
|
||||
#include <iostream>
|
||||
#include <algorithm>
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
#!/bin/bash
|
||||
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -21,7 +21,6 @@ if [[ "${option}" == "--help" ]]; then
|
||||
echo " --copyright"
|
||||
echo " --license"
|
||||
echo " --release"
|
||||
echo " --math"
|
||||
echo " --style"
|
||||
echo " --history"
|
||||
echo ""
|
||||
@@ -36,8 +35,8 @@ cd $(git rev-parse --show-toplevel)
|
||||
# copyright check
|
||||
copyright=true
|
||||
if [[ "${option}" == "--copyright" || "${option}" == "" ]]; then
|
||||
if git grep -n "^\(#\|//\).*Copyright.*2010-20\(2[^5]\|[^2].\)" > matches.txt; then
|
||||
echo "Please update the following files to Copyright (c) 2010-2025:"
|
||||
if git grep -n "^\(#\|//\).*Copyright.*2010-20\(2[^3]\|[^2].\)" > matches.txt; then
|
||||
echo "Please update the following files to Copyright (c) 2010-2023:"
|
||||
cat matches.txt
|
||||
copyright=false
|
||||
fi
|
||||
@@ -64,18 +63,6 @@ if [[ "${option}" == "--release" || "${option}" == "" ]]; then
|
||||
fi
|
||||
fi
|
||||
|
||||
# math in doxygen check
|
||||
math=true
|
||||
if [[ "${option}" == "--math" || "${option}" == "" ]]; then
|
||||
if grep '\\f' -R doc/CodeDocumentation.dox mfem.hpp config general linalg mesh fem examples miniapps | grep -v '\\frac' | grep -v fem/picojson.h | grep -v config/githooks/pre-push > matches.txt
|
||||
then
|
||||
echo "Please use $..$ and \$\$..\$\$ for LaTeX formulas in the following"
|
||||
echo "comments instead of the Doxygen style \f$..\f$, \f[..\f], etc."
|
||||
cat matches.txt
|
||||
math=false
|
||||
fi
|
||||
fi
|
||||
|
||||
# wrap-up
|
||||
code=0
|
||||
if ! $copyright ; then
|
||||
@@ -90,10 +77,6 @@ if ! $release ; then
|
||||
echo "release check failed, unroll log for details"
|
||||
code=1
|
||||
fi
|
||||
if ! $math ; then
|
||||
echo "math in doxygen check failed, unroll log for details"
|
||||
code=1
|
||||
fi
|
||||
|
||||
# `code-style` is not just a check, it will actually reformat the code if
|
||||
# necessary. This means that if one pushes while the repo is in dirty state
|
||||
|
||||
+3
-5
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -38,14 +38,14 @@ all: header config-mk
|
||||
MPI = $(MFEM_USE_MPI:NO=)
|
||||
GHV_CXX ?= $(MFEM_CXX)
|
||||
GHV = get_hypre_version
|
||||
GHV_FLAGS = $(MFEM_CXXFLAGS) $(subst @MFEM_DIR@,$(if $(MFEM_DIR),$(MFEM_DIR),..),$(HYPRE_OPT))
|
||||
GHV_FLAGS = $(subst @MFEM_DIR@,$(if $(MFEM_DIR),$(MFEM_DIR),..),$(HYPRE_OPT))
|
||||
SMX = $(if $(MFEM_USE_PUMI:NO=),MFEM_USE_SIMMETRIX)
|
||||
SMX_PATH = $(PUMI_DIR)/include/gmi_sim.h
|
||||
SMX_FILE = $(subst @MFEM_DIR@,$(if $(MFEM_DIR),$(MFEM_DIR),..),$(SMX_PATH))
|
||||
MUMPS = $(MFEM_USE_MUMPS:NO=)
|
||||
GMV_CXX ?= $(MFEM_CXX)
|
||||
GMV = get_mumps_version
|
||||
GMV_FLAGS = $(MFEM_CXXFLAGS) $(subst @MFEM_DIR@,$(if $(MFEM_DIR),$(MFEM_DIR),..),$(MUMPS_OPT))
|
||||
GMV_FLAGS = $(subst @MFEM_DIR@,$(if $(MFEM_DIR),$(MFEM_DIR),..),$(MUMPS_OPT))
|
||||
|
||||
$(GHV): $(SRC)$(GHV).cpp
|
||||
$(call mfem-info, Determining HYPRE version ...)
|
||||
@@ -110,5 +110,3 @@ config-mk:
|
||||
|
||||
clean:
|
||||
rm -f $(CONFIG_HPP) $(CONFIG_MK) sample-runs-build.log
|
||||
rm -f $(GHV) $(GHV).out $(GMV) $(GMV).out
|
||||
rm -rf *.dSYM
|
||||
|
||||
+15
-85
@@ -1,6 +1,6 @@
|
||||
#!/bin/bash
|
||||
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
@@ -32,7 +32,7 @@ groups_serial=(
|
||||
'"examples"
|
||||
"Examples:"
|
||||
"examples"
|
||||
"ex{,[1-9]}[0-9].cpp"'
|
||||
"ex{,1,2,3}[0-9].cpp"'
|
||||
# "ex1.cpp"'
|
||||
'"sundials"
|
||||
"SUNDIALS examples:"
|
||||
@@ -58,10 +58,6 @@ groups_serial=(
|
||||
"HiOp examples:"
|
||||
"examples/hiop"
|
||||
"ex9.cpp"'
|
||||
'"moonolith"
|
||||
"Moonolith examples:"
|
||||
"examples/moonolith"
|
||||
"ex1.cpp"'
|
||||
'"pumi"
|
||||
"PUMI examples:"
|
||||
"examples/pumi"
|
||||
@@ -70,38 +66,25 @@ groups_serial=(
|
||||
'"meshing"
|
||||
"Meshing miniapps:"
|
||||
"miniapps/meshing"
|
||||
"mobius-strip.cpp klein-bottle.cpp extruder.cpp toroid.cpp mesh-quality.cpp
|
||||
polar-nc.cpp reflector.cpp shaper.cpp trimmer.cpp twist.cpp
|
||||
"mobius-strip.cpp klein-bottle.cpp extruder.cpp toroid.cpp
|
||||
mesh-optimizer.cpp minimal-surface.cpp"'
|
||||
'"adjoint"
|
||||
"Adjoint miniapps:"
|
||||
"miniapps/adjoint"
|
||||
"cvsRoberts_ASAi_dns.cpp"'
|
||||
'"autodiff"
|
||||
"Autodiff miniapps:"
|
||||
"miniapps/autodiff"
|
||||
"seq_example.cpp seq_test.cpp"' # 'seq_test.cpp' has no sample runs
|
||||
'"dpg"
|
||||
"DPG miniapps:"
|
||||
"miniapps/dpg"
|
||||
"{acoustics,convection-diffusion,diffusion,maxwell}.cpp"'
|
||||
'"gslib"
|
||||
"GSLIB miniapps:"
|
||||
"miniapps/gslib"
|
||||
"field-diff.cpp field-interp.cpp findpts.cpp schwarz_ex1.cpp "'
|
||||
# todo: miniapps/mtop
|
||||
'"nurbs"
|
||||
"NURBS miniapps:"
|
||||
"miniapps/nurbs"
|
||||
"nurbs_ex1.cpp"'
|
||||
# todo: add other nurbs miniapps
|
||||
# todo: miniapps/solvers (serial)
|
||||
'"tools"
|
||||
"Tools miniapps:"
|
||||
"miniapps/tools"
|
||||
"convert-dc.cpp display-basis.cpp get-values.cpp load-dc.cpp
|
||||
lor-transfer.cpp"'
|
||||
# todo: add other tools miniapps
|
||||
'"toys"
|
||||
"Toys miniapps:"
|
||||
"miniapps/toys"
|
||||
@@ -117,7 +100,7 @@ groups_parallel=(
|
||||
'"examples"
|
||||
"Examples:"
|
||||
"examples"
|
||||
"ex{,[1-9]}[0-9]p.cpp"'
|
||||
"ex{,1,2,3}[0-9]p.cpp"'
|
||||
# "ex1p.cpp"'
|
||||
'"sundials"
|
||||
"SUNDIALS examples:"
|
||||
@@ -143,10 +126,6 @@ groups_parallel=(
|
||||
"HiOp examples:"
|
||||
"examples/hiop"
|
||||
"ex9p.cpp"'
|
||||
'"moonolith"
|
||||
"Moonolith examples:"
|
||||
"examples/moonolith"
|
||||
"ex{1,2}p.cpp"'
|
||||
'"pumi"
|
||||
"PUMI examples:"
|
||||
"examples/pumi"
|
||||
@@ -159,41 +138,24 @@ groups_parallel=(
|
||||
'"meshing"
|
||||
"Meshing miniapps:"
|
||||
"miniapps/meshing"
|
||||
"pmesh-optimizer.cpp pmesh-fitting.cpp pminimal-surface.cpp
|
||||
fit-node-position.cpp"'
|
||||
"pmesh-optimizer.cpp pmesh-fitting.cpp pminimal-surface.cpp"'
|
||||
'"electromagnetics"
|
||||
"Electromagnetics miniapps:"
|
||||
"miniapps/electromagnetics"
|
||||
"joule.cpp"'
|
||||
# "{joule,maxwell,tesla,volta}.cpp"' # todo: multiline sample runs
|
||||
# "{volta,tesla,joule}.cpp"' # todo: multiline sample runs
|
||||
'"adjoint"
|
||||
"Adjoint miniapps:"
|
||||
"miniapps/adjoint"
|
||||
"adjoint_advection_diffusion.cpp"'
|
||||
'"autodiff"
|
||||
"Autodiff miniapps:"
|
||||
"miniapps/autodiff"
|
||||
"par_example.cpp"'
|
||||
'"dpg"
|
||||
"DPG miniapps:"
|
||||
"miniapps/dpg"
|
||||
"p{acoustics,convection-diffusion,diffusion,maxwell}.cpp"'
|
||||
'"gslib"
|
||||
"GSLIB miniapps:"
|
||||
"miniapps/gslib"
|
||||
"pfindpts.cpp schwarz_ex1p.cpp"'
|
||||
'"hdiv-linear-solver"
|
||||
"H(div) linear solver miniapps:"
|
||||
"miniapps/hdiv-linear-solver"
|
||||
"grad_div.cpp darcy.cpp"'
|
||||
# 'miniapps/hooke/hooke.cpp' has no sample runs
|
||||
# todo: miniapps/mtop
|
||||
# todo: miniapps/multidomain
|
||||
'"navier"
|
||||
"Navier miniapps:"
|
||||
"miniapps/navier"
|
||||
"navier_cht.cpp"'
|
||||
# todo: add other navier miniapps
|
||||
'"nurbs"
|
||||
"NURBS miniapps:"
|
||||
"miniapps/nurbs"
|
||||
@@ -202,18 +164,14 @@ groups_parallel=(
|
||||
"Shifted miniapps:"
|
||||
"miniapps/shifted"
|
||||
"distance.cpp"'
|
||||
# todo: add other shifted miniapps
|
||||
'"solvers"
|
||||
"Solvers miniapps:"
|
||||
"miniapps/solvers"
|
||||
"block-solvers.cpp"'
|
||||
# todo: add other solvers miniapps
|
||||
# todo: miniapps/spde
|
||||
'"tools"
|
||||
"Tools miniapps:"
|
||||
"miniapps/tools"
|
||||
"convert-dc.cpp get-values.cpp load-dc.cpp"'
|
||||
# todo: add other tools miniapps
|
||||
"convert-cd.cpp get-values.cpp load-dc.cpp"'
|
||||
'"convergence"
|
||||
"Convergence tests:"
|
||||
"tests/convergence"
|
||||
@@ -228,7 +186,7 @@ groups_all=(
|
||||
'"examples"
|
||||
"Examples:"
|
||||
"examples"
|
||||
"ex\"{,[1-9]}[0-9]\"{,p}.cpp"'
|
||||
"ex\"{,1,2,3}[0-9]\"{,p}.cpp"'
|
||||
'"sundials"
|
||||
"SUNDIALS examples:"
|
||||
"examples/sundials"
|
||||
@@ -257,14 +215,10 @@ groups_all=(
|
||||
"HiOp examples:"
|
||||
"examples/hiop"
|
||||
"ex9.cpp ex9p.cpp"'
|
||||
'"moonolith"
|
||||
"Moonolith examples:"
|
||||
"examples/moonolith"
|
||||
"ex1.cpp ex{1,2}p.cpp"'
|
||||
'"pumi"
|
||||
"PUMI examples:"
|
||||
"examples/pumi"
|
||||
"ex1.cpp ex2.cpp ex1p.cpp ex6p.cpp"'
|
||||
"ex1.cpp ex1p.cpp ex2.cpp ex6p.cpp"'
|
||||
'"superlu"
|
||||
"Superlu examples:"
|
||||
"examples/superlu"
|
||||
@@ -272,67 +226,43 @@ groups_all=(
|
||||
'"meshing"
|
||||
"Meshing miniapps:"
|
||||
"miniapps/meshing"
|
||||
"mobius-strip.cpp klein-bottle.cpp extruder.cpp toroid.cpp mesh-quality.cpp
|
||||
polar-nc.cpp reflector.cpp shaper.cpp trimmer.cpp twist.cpp
|
||||
{,p}mesh-optimizer.cpp pmesh-fitting.cpp {,p}minimal-surface.cpp
|
||||
fit-node-position.cpp"'
|
||||
"mobius-strip.cpp klein-bottle.cpp extruder.cpp toroid.cpp
|
||||
{,p}mesh-optimizer.cpp pmesh-fitting.cpp {,p}minimal-surface.cpp"'
|
||||
'"electromagnetics"
|
||||
"Electromagnetics miniapps:"
|
||||
"miniapps/electromagnetics"
|
||||
"joule.cpp"'
|
||||
# "{joule,maxwell,tesla,volta}.cpp"' # todo: multiline sample runs
|
||||
# "{volta,tesla,joule}.cpp"' # todo: multiline sample runs
|
||||
'"adjoint"
|
||||
"Adjoint miniapps:"
|
||||
"miniapps/adjoint"
|
||||
"cvsRoberts_ASAi_dns.cpp adjoint_advection_diffusion.cpp"'
|
||||
'"autodiff"
|
||||
"Autodiff miniapps:"
|
||||
"miniapps/autodiff"
|
||||
"seq_example.cpp seq_test.cpp par_example.cpp"'
|
||||
# 'seq_test.cpp' has no sample runs
|
||||
'"dpg"
|
||||
"DPG miniapps:"
|
||||
"miniapps/dpg"
|
||||
"{,p}{acoustics,convection-diffusion,diffusion,maxwell}.cpp"'
|
||||
"adjoint_advection_diffusion.cpp cvsRoberts_ASAi_dns.cpp"'
|
||||
'"gslib"
|
||||
"GSLIB miniapps:"
|
||||
"miniapps/gslib"
|
||||
"field-diff.cpp field-interp.cpp findpts.cpp schwarz_ex1.cpp pfindpts.cpp
|
||||
schwarz_ex1p.cpp"'
|
||||
'"hdiv-linear-solver"
|
||||
"H(div) linear solver miniapps:"
|
||||
"miniapps/hdiv-linear-solver"
|
||||
"grad_div.cpp darcy.cpp"'
|
||||
# 'miniapps/hooke/hooke.cpp' has no sample runs
|
||||
# todo: miniapps/mtop
|
||||
# todo: miniapps/multidomain
|
||||
'"navier"
|
||||
"Navier miniapps:"
|
||||
"miniapps/navier"
|
||||
"navier_cht.cpp"'
|
||||
# todo: add other navier miniapps
|
||||
'"nurbs"
|
||||
"NURBS miniapps:"
|
||||
"miniapps/nurbs"
|
||||
"nurbs_ex1.cpp nurbs_ex1p.cpp nurbs_ex11p.cpp"'
|
||||
# todo: add other nurbs miniapps
|
||||
'"shifted"
|
||||
"Shifted miniapps:"
|
||||
"miniapps/shifted"
|
||||
"distance.cpp"'
|
||||
# todo: add other shifted miniapps
|
||||
'"solvers"
|
||||
"Solvers miniapps:"
|
||||
"miniapps/solvers"
|
||||
"block-solvers.cpp"'
|
||||
# todo: add other solvers miniapps
|
||||
# todo: miniapps/spde
|
||||
'"tools"
|
||||
"Tools miniapps:"
|
||||
"miniapps/tools"
|
||||
"convert-dc.cpp display-basis.cpp get-values.cpp load-dc.cpp
|
||||
lor-transfer.cpp"'
|
||||
# todo: add other tools miniapps
|
||||
'"toys"
|
||||
"Toys miniapps:"
|
||||
"miniapps/toys"
|
||||
@@ -385,7 +315,7 @@ function extract_sample_runs()
|
||||
sruns=`grep -v "^//.* mpirun .* ${app}" "${src}" |
|
||||
grep "^//.* ${app}" |
|
||||
sed -e "s/.* ${app}/${vg_app}/g"`
|
||||
runs="${sruns}"$'\n'"${pruns}"
|
||||
runs="${sruns}${pruns}"
|
||||
if [ "$skip_gen_meshes" == "yes" ]; then
|
||||
runs=`printf "%s" "$runs" | grep -v ".* -m .*\.gen"`
|
||||
fi
|
||||
@@ -456,7 +386,7 @@ function help_message()
|
||||
mfem_config [${mfem_config}]
|
||||
Set MFEM configuration options
|
||||
make [${make}], mpiexec [${mpiexec}], mpiexec_np [${mpiexec_np}]
|
||||
Their values can also be set using the respective uppercase environment
|
||||
Their values can also set using the respective uppercase environment
|
||||
variable
|
||||
mfem_build_dir [${mfem_build_dir}]
|
||||
Same as '-d': set this variable to something different from <mfem_dir>
|
||||
|
||||
+1
-1
@@ -1,4 +1,4 @@
|
||||
// Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
// Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
// at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
// LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
//
|
||||
|
||||
+1
-1
@@ -1,4 +1,4 @@
|
||||
# Copyright (c) 2010-2025, Lawrence Livermore National Security, LLC. Produced
|
||||
# Copyright (c) 2010-2023, Lawrence Livermore National Security, LLC. Produced
|
||||
# at the Lawrence Livermore National Laboratory. All Rights reserved. See files
|
||||
# LICENSE and NOTICE for details. LLNL-CODE-806117.
|
||||
#
|
||||
|
||||
@@ -1,20 +0,0 @@
|
||||
diff --git a/CMakeLists.txt b/CMakeLists.txt
|
||||
index 186a320..39e5356 100644
|
||||
--- a/CMakeLists.txt
|
||||
+++ b/CMakeLists.txt
|
||||
@@ -1,4 +1,4 @@
|
||||
-cmake_minimum_required(VERSION 2.8)
|
||||
+cmake_minimum_required(VERSION 3.12.0...4.0.0)
|
||||
project(METIS)
|
||||
|
||||
set(GKLIB_PATH "${CMAKE_SOURCE_DIR}/GKlib" CACHE PATH "path to GKlib")
|
||||
diff --git a/GKlib/CMakeLists.txt b/GKlib/CMakeLists.txt
|
||||
index 67b600a..44321a6 100644
|
||||
--- a/GKlib/CMakeLists.txt
|
||||
+++ b/GKlib/CMakeLists.txt
|
||||
@@ -1,4 +1,4 @@
|
||||
-cmake_minimum_required(VERSION 2.8)
|
||||
+cmake_minimum_required(VERSION 3.12.0...4.0.0)
|
||||
project(GKlib)
|
||||
|
||||
get_filename_component(abs "." ABSOLUTE)
|
||||
@@ -22,7 +22,6 @@ vcpkg_extract_source_archive_ex(
|
||||
fix-linux-build-error.patch
|
||||
install-metisConfig.patch
|
||||
fix-INT_MIN_define.patch
|
||||
cmake4.patch
|
||||
)
|
||||
|
||||
vcpkg_configure_cmake(
|
||||
|
||||
@@ -1,7 +1,7 @@
|
||||
MFEM NURBS mesh v1.0
|
||||
|
||||
#
|
||||
# MFEM Geometry Types (see fem/geom.hpp):
|
||||
# MFEM Geometry Types (see mesh/geom.hpp):
|
||||
#
|
||||
# SEGMENT = 1
|
||||
# SQUARE = 3
|
||||
|
||||
@@ -1,7 +1,7 @@
|
||||
MFEM NURBS mesh v1.0
|
||||
|
||||
#
|
||||
# MFEM Geometry Types (see fem/geom.hpp):
|
||||
# MFEM Geometry Types (see mesh/geom.hpp):
|
||||
#
|
||||
# SEGMENT = 1
|
||||
# SQUARE = 3
|
||||
|
||||
+1
-1
@@ -1,7 +1,7 @@
|
||||
MFEM mesh v1.0
|
||||
|
||||
#
|
||||
# MFEM Geometry Types (see fem/geom.hpp):
|
||||
# MFEM Geometry Types (see mesh/geom.hpp):
|
||||
#
|
||||
# POINT = 0
|
||||
# SEGMENT = 1
|
||||
|
||||
@@ -1,95 +0,0 @@
|
||||
MFEM NURBS mesh v1.1
|
||||
|
||||
#
|
||||
# MFEM Geometry Types (see mesh/geom.hpp):
|
||||
#
|
||||
# SEGMENT = 1
|
||||
# SQUARE = 3
|
||||
# CUBE = 5
|
||||
#
|
||||
|
||||
dimension
|
||||
2
|
||||
|
||||
elements
|
||||
2
|
||||
1 3 0 1 4 5
|
||||
2 3 1 2 3 4
|
||||
|
||||
boundary
|
||||
6
|
||||
3 1 0 1
|
||||
3 1 4 5
|
||||
3 1 1 2
|
||||
3 1 3 4
|
||||
1 1 5 0
|
||||
2 1 2 3
|
||||
|
||||
edges
|
||||
7
|
||||
0 0 1
|
||||
0 5 4
|
||||
1 1 2
|
||||
1 4 3
|
||||
2 0 5
|
||||
2 1 4
|
||||
2 2 3
|
||||
|
||||
vertices
|
||||
6
|
||||
|
||||
knotvectors
|
||||
3
|
||||
1 5 0 0 1 2 3 4 4
|
||||
1 5 0 0 1 2 3 4 4
|
||||
1 2 0 0 1 1
|
||||
|
||||
spacing
|
||||
3
|
||||
0 5 3 1 4 0 0 10.0
|
||||
1 4 3 2 4 0 1 0.15 0.15
|
||||
2 2 3 1 1 0 1 0.4
|
||||
|
||||
weights
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
1
|
||||
|
||||
FiniteElementSpace
|
||||
FiniteElementCollection: NURBS1
|
||||
VDim: 2
|
||||
Ordering: 1
|
||||
|
||||
0 0
|
||||
4 0
|
||||
8 0
|
||||
8 1
|
||||
4 1
|
||||
0 1
|
||||
1 0
|
||||
2 0
|
||||
3 0
|
||||
3 1
|
||||
2 1
|
||||
1 1
|
||||
5 0
|
||||
6 0
|
||||
7 0
|
||||
7 1
|
||||
6 1
|
||||
5 1
|
||||
@@ -1,7 +1,7 @@
|
||||
MFEM NURBS mesh v1.0
|
||||
|
||||
#
|
||||
# MFEM Geometry Types (see fem/geom.hpp):
|
||||
# MFEM Geometry Types (see mesh/geom.hpp):
|
||||
#
|
||||
# SEGMENT = 1
|
||||
# SQUARE = 3
|
||||
|
||||
Some files were not shown because too many files have changed in this diff Show More
Reference in New Issue
Block a user